View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_low_146 (Length: 304)
Name: NF0846_low_146
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_low_146 |
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Alignment Details
Target: chr3 (Bit Score: 139; Significance: 9e-73; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 34570880 - 34570738
Alignment:
| Q |
1 |
cgtgcttgaaggaaaactcgcccaatctgctcaatcgaaattgcatttgagaattttcttggacaataacaaaggagttgaaattatcaaggattacttg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
34570880 |
cgtgcttgaaggaaaactcgcccaatctgctcaatcgaaattgcatttgagaattttcttggacaataacaaaggagttgcaattatcaaggattacttg |
34570781 |
T |
|
| Q |
101 |
gagaagaaggaaaaggaagtaggaaaaaaggtaagcacaatct |
143 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34570780 |
gagaagaaggaaaaggaagtaggaaaaaaggtaagcacaatct |
34570738 |
T |
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