View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_low_147 (Length: 303)
Name: NF0846_low_147
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_low_147 |
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Alignment Details
Target: chr7 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 20 - 220
Target Start/End: Original strand, 42217803 - 42218004
Alignment:
| Q |
20 |
cttgttgtgtgtagtttatggtatgtatttggaaacacagataccacattctcctcctctgcattcaattaaattccacaatattggatata-tgcataa |
118 |
Q |
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| T |
42217803 |
cttgttgtgtgtagtttatggtatgtatttggaaacacagataccacattctcctcctctgcattcaattaaattccacaatattggatataatgcataa |
42217902 |
T |
|
| Q |
119 |
tcataattattattggagaattaatttgtcccttcatgtcagaaatgtcacctttttaagcctagcaaaattagcgttcatgtaccttgcagtttctctg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
42217903 |
tcataattattattggagaattaatttgtcccttcatgtcagaaatgtcacctttttaagcctagcaaaattagtgttcatgtaccttgcagtttctctg |
42218002 |
T |
|
| Q |
219 |
ct |
220 |
Q |
| |
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|| |
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| T |
42218003 |
ct |
42218004 |
T |
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