View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0846_low_151 (Length: 297)

Name: NF0846_low_151
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0846_low_151
NF0846_low_151
[»] chr3 (44 HSPs)
chr3 (26-144)||(600684-600804)
chr3 (67-206)||(53190759-53190903)
chr3 (66-206)||(27899081-27899226)
chr3 (66-209)||(21348722-21348870)
chr3 (67-209)||(30599915-30600062)
chr3 (69-209)||(43765139-43765284)
chr3 (64-199)||(54898434-54898574)
chr3 (64-209)||(51684607-51684757)
chr3 (67-206)||(2226152-2226296)
chr3 (81-206)||(35905712-35905842)
chr3 (67-206)||(46112487-46112631)
chr3 (67-209)||(17515310-17515457)
chr3 (67-209)||(23293167-23293314)
chr3 (67-206)||(41977750-41977894)
chr3 (120-209)||(42279562-42279654)
chr3 (119-209)||(46197774-46197867)
chr3 (115-209)||(48830803-48830900)
chr3 (67-209)||(3152215-3152362)
chr3 (67-153)||(23291570-23291658)
chr3 (70-206)||(2377032-2377173)
chr3 (67-144)||(48829356-48829435)
chr3 (61-153)||(53094274-53094368)
chr3 (66-144)||(46114115-46114196)
chr3 (67-153)||(611223-611311)
chr3 (67-153)||(38191895-38191983)
chr3 (67-153)||(38193511-38193599)
chr3 (67-153)||(41979353-41979441)
chr3 (67-153)||(46308807-46308895)
chr3 (64-104)||(27897148-27897188)
chr3 (67-144)||(51686404-51686483)
chr3 (92-153)||(54412548-54412611)
chr3 (156-206)||(7884873-7884924)
chr3 (65-153)||(46609147-46609237)
chr3 (67-113)||(7884942-7884988)
chr3 (66-141)||(30598336-30598413)
chr3 (70-153)||(42282474-42282559)
chr3 (66-141)||(44267980-44268057)
chr3 (156-209)||(44276193-44276247)
chr3 (66-209)||(44794207-44794354)
chr3 (67-153)||(3150252-3150340)
chr3 (67-153)||(44795891-44795979)
chr3 (67-153)||(54900075-54900163)
chr3 (159-206)||(600805-600853)
chr3 (68-153)||(2378984-2379071)
[»] chr8 (26 HSPs)
chr8 (65-206)||(8609787-8609933)
chr8 (67-209)||(13282478-13282625)
chr8 (66-206)||(38547227-38547372)
chr8 (67-209)||(41042581-41042728)
chr8 (65-209)||(26242311-26242460)
chr8 (67-206)||(13108336-13108480)
chr8 (119-209)||(41825641-41825734)
chr8 (67-153)||(42943427-42943515)
chr8 (70-209)||(42941777-42941921)
chr8 (64-153)||(5038063-5038153)
chr8 (122-209)||(13486096-13486186)
chr8 (119-209)||(7745109-7745202)
chr8 (119-209)||(9673162-9673255)
chr8 (119-209)||(22272390-22272483)
chr8 (68-175)||(5036446-5036557)
chr8 (67-153)||(22273892-22273980)
chr8 (67-144)||(34681076-34681155)
chr8 (67-144)||(26238726-26238805)
chr8 (67-169)||(27691154-27691260)
chr8 (64-153)||(13106801-13106892)
chr8 (57-153)||(38548832-38548930)
chr8 (66-153)||(33762714-33762803)
chr8 (119-209)||(40339677-40339770)
chr8 (67-153)||(601705-601793)
chr8 (67-153)||(27692838-27692926)
chr8 (117-153)||(9672029-9672065)
[»] chr1 (26 HSPs)
chr1 (63-209)||(27087279-27087430)
chr1 (65-206)||(31238475-31238621)
chr1 (65-206)||(4855946-4856092)
chr1 (65-206)||(25278348-25278494)
chr1 (66-206)||(6818658-6818803)
chr1 (67-206)||(34778118-34778262)
chr1 (67-209)||(2869579-2869726)
chr1 (64-209)||(51896129-51896279)
chr1 (119-209)||(15104495-15104588)
chr1 (67-206)||(37344342-37344486)
chr1 (64-153)||(31236816-31236907)
chr1 (66-209)||(3013447-3013601)
chr1 (60-205)||(50556078-50556228)
chr1 (70-153)||(3011858-3011943)
chr1 (66-153)||(25278989-25279078)
chr1 (66-141)||(37088149-37088226)
chr1 (66-209)||(46583533-46583681)
chr1 (65-144)||(25278852-25278933)
chr1 (64-153)||(25276739-25276830)
chr1 (68-153)||(50554164-50554251)
chr1 (70-153)||(51894570-51894655)
chr1 (64-153)||(26223584-26223675)
chr1 (67-144)||(52641888-52641967)
chr1 (67-153)||(34776569-34776657)
chr1 (67-153)||(37345963-37346051)
chr1 (67-153)||(46582010-46582098)
[»] chr5 (20 HSPs)
chr5 (65-206)||(17574316-17574462)
chr5 (67-206)||(7267843-7267987)
chr5 (67-209)||(36057590-36057737)
chr5 (67-209)||(34327635-34327782)
chr5 (65-153)||(12738737-12738827)
chr5 (65-153)||(12801560-12801650)
chr5 (67-206)||(2179787-2179931)
chr5 (121-206)||(30468260-30468348)
chr5 (61-205)||(8539669-8539818)
chr5 (119-209)||(18624985-18625078)
chr5 (67-153)||(30463900-30463988)
chr5 (67-153)||(8541272-8541360)
chr5 (67-153)||(2852886-2852974)
chr5 (65-153)||(28813766-28813858)
chr5 (67-153)||(21842993-21843081)
chr5 (66-169)||(24541230-24541337)
chr5 (88-153)||(43492134-43492201)
chr5 (66-153)||(7269447-7269536)
chr5 (121-176)||(35395389-35395446)
chr5 (67-141)||(34328840-34328916)
[»] chr7 (28 HSPs)
chr7 (65-206)||(34776895-34777041)
chr7 (67-206)||(39859209-39859353)
chr7 (92-206)||(13168145-13168267)
chr7 (67-209)||(37115503-37115650)
chr7 (67-206)||(6602335-6602479)
chr7 (70-209)||(24228386-24228530)
chr7 (66-209)||(47386186-47386334)
chr7 (67-209)||(30940402-30940549)
chr7 (67-209)||(38474120-38474267)
chr7 (92-206)||(45359361-45359480)
chr7 (66-153)||(13169684-13169773)
chr7 (60-153)||(35403620-35403715)
chr7 (65-153)||(6605398-6605488)
chr7 (65-209)||(27666042-27666191)
chr7 (65-153)||(39857643-39857733)
chr7 (67-153)||(34774998-34775086)
chr7 (67-153)||(37113941-37114029)
chr7 (121-197)||(37796170-37796249)
chr7 (121-209)||(48852324-48852415)
chr7 (68-141)||(24226582-24226657)
chr7 (67-168)||(56330-56435)
chr7 (65-153)||(22155848-22155938)
chr7 (65-153)||(22211763-22211853)
chr7 (67-114)||(23906309-23906356)
chr7 (119-209)||(35693347-35693442)
chr7 (67-153)||(47384294-47384382)
chr7 (70-114)||(13018036-13018080)
chr7 (67-169)||(29996532-29996638)
[»] chr2 (20 HSPs)
chr2 (66-209)||(39664745-39664893)
chr2 (65-207)||(44709744-44709891)
chr2 (67-206)||(19908246-19908391)
chr2 (66-206)||(16763075-16763220)
chr2 (61-209)||(17696200-17696353)
chr2 (65-209)||(40560221-40560370)
chr2 (66-209)||(2766933-2767081)
chr2 (61-209)||(14389081-14389234)
chr2 (67-209)||(6797507-6797654)
chr2 (66-209)||(39455168-39455316)
chr2 (71-209)||(42519202-42519346)
chr2 (119-206)||(16377197-16377287)
chr2 (67-144)||(19581414-19581493)
chr2 (67-141)||(34400314-34400390)
chr2 (64-153)||(16376733-16376824)
chr2 (70-144)||(19906685-19906761)
chr2 (67-153)||(39456781-39456869)
chr2 (65-153)||(16764612-16764702)
chr2 (67-153)||(14387349-14387437)
chr2 (67-153)||(39663154-39663242)
[»] scaffold0564 (1 HSPs)
scaffold0564 (69-206)||(8264-8404)
[»] chr4 (23 HSPs)
chr4 (67-206)||(35404425-35404569)
chr4 (68-209)||(49523125-49523271)
chr4 (70-209)||(41761723-41761867)
chr4 (66-209)||(41781538-41781686)
chr4 (67-206)||(51011926-51012070)
chr4 (67-209)||(48813787-48813934)
chr4 (66-153)||(20493826-20493915)
chr4 (117-209)||(42980687-42980782)
chr4 (65-153)||(35401747-35401837)
chr4 (119-209)||(48646724-48646817)
chr4 (92-209)||(2693230-2693351)
chr4 (66-153)||(49524734-49524823)
chr4 (92-206)||(52868129-52868248)
chr4 (92-153)||(39345589-39345652)
chr4 (67-144)||(48645255-48645334)
chr4 (66-153)||(43507166-43507255)
chr4 (67-153)||(319273-319361)
chr4 (67-153)||(4173741-4173829)
chr4 (67-153)||(33266011-33266099)
chr4 (67-153)||(43508654-43508742)
chr4 (67-153)||(43519424-43519512)
chr4 (66-136)||(320918-320990)
chr4 (67-153)||(33264382-33264470)
[»] chr6 (16 HSPs)
chr6 (119-209)||(9398714-9398807)
chr6 (92-209)||(20523391-20523513)
chr6 (66-206)||(32439071-32439216)
chr6 (119-209)||(7372935-7373028)
chr6 (64-206)||(32516874-32517021)
chr6 (119-209)||(10568453-10568546)
chr6 (66-209)||(13613559-13613707)
chr6 (67-144)||(10569929-10570008)
chr6 (68-206)||(11355223-11355366)
chr6 (121-209)||(6899541-6899632)
chr6 (156-209)||(7049850-7049904)
chr6 (67-153)||(32518498-32518586)
chr6 (64-134)||(7371172-7371244)
chr6 (67-153)||(9400036-9400124)
chr6 (121-209)||(14338452-14338543)
chr6 (121-153)||(33267117-33267149)
[»] scaffold1454 (1 HSPs)
scaffold1454 (70-206)||(1266-1407)
[»] scaffold0058 (3 HSPs)
scaffold0058 (65-209)||(3292-3441)
scaffold0058 (65-209)||(4464-4613)
scaffold0058 (65-153)||(14344-14434)
[»] scaffold0002 (1 HSPs)
scaffold0002 (74-141)||(436272-436341)


Alignment Details
Target: chr3 (Bit Score: 82; Significance: 9e-39; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 26 - 144
Target Start/End: Original strand, 600684 - 600804
Alignment:
Q  26 aaaacaaaatggttaaatatgtttttgatacatataaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaat 123  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||| ||||||||||||||| |||||||  |||||||||    
T  600684 aaaacaaaatggttaaatatgtttttggtacatataaatttgactaatacctcaaattcatccttgaattttaaaaaatcgaccaaatttgttcatgaat 600783  T
Q  124 tttgcgaaatatctatttagt 144  Q
    ||| | |||||||||||||||    
T  600784 tttacaaaatatctatttagt 600804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 53190903 - 53190759
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  53190903 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 53190804  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||| || |||||||||||| ||||||||||||||||    
T  53190803 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 53190759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 27899226 - 27899081
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    |||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  27899226 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 27899127  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||| |||||||| || |||||||||||| ||||||||||||||||    
T  27899126 ccataaaaatggtccctccgtccaaaagctccgttagtggtgatga 27899081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 21348722 - 21348870
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    |||||||||||||| |||  | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  21348722 tgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 21348821  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||| || |||||||||||| | |||||||||||| ||||    
T  21348822 ccatcaaaatggtccctccgtccaaaagctctgttagtggtgataatgt 21348870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 30600062 - 30599915
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | |||||||||| | |||||||||||||||   | |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  30600062 gactaatacctcaaattcgtccttaaatttttacaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttagagacgtc 30599963  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
     ||||||||||| || |||||||||||| | |||||||||||||||||    
T  30599962 gatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 30599915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 69 - 209
Target Start/End: Original strand, 43765139 - 43765284
Alignment:
Q  69 ctaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtcca 164  Q
    ||||||||||| |||| | ||| |||||| ||||||||| ||||||  |||  |||||||||||||||||||||||||| |||||  ||| |||||||||    
T  43765139 ctaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgttccggaattttgcgaaatatctatttagtttctgaattttacagacgtcca 43765238  T
Q  165 tcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||| || || ||||||||| |||||||||||||||||||    
T  43765239 tcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 43765284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 199
Target Start/End: Original strand, 54898434 - 54898574
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagac 159  Q
    |||||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||    
T  54898434 tttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagac 54898533  T
Q  160 gtccatcaaaatggtc-caccgtccaaaagccccgttagtg 199  Q
    || ||||||||||||| | |||||||||||| |||||||||    
T  54898534 gttcatcaaaatggtctctccgtccaaaagctccgttagtg 54898574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 51684607 - 51684757
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gac 159  Q
    ||||||||||| |||| |||| | ||| |||||| ||||||| ||||||||  | | |||||||||| ||||||||||||||| | |||||| ||  |||    
T  51684607 tttgactaatatctcaaattcgtccttgaattttcaaaaatcagccaaattcatccctgaattttgcaaaatatctatttagtccttgaattttacagac 51684706  T
Q  160 gtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  51684707 gtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 51684757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 2226296 - 2226152
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||     
T  2226296 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgtt 2226197  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||| | || |||||||||| | | ||||||||||||||    
T  2226196 catcaaaatgttccctccgtccaaaaactctgttagtggtgatga 2226152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 81 - 206
Target Start/End: Complemental strand, 35905842 - 35905712
Alignment:
Q  81 attcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-c 175  Q
    |||||| ||| |||||||||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| |||||| |||||||||||| |    
T  35905842 attcatccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgttcatcaaaatggtcc 35905743  T
Q  176 caccgtccaaaagccccgttagtggtgatga 206  Q
    | |||||||||||| ||| ||||||||||||    
T  35905742 ctccgtccaaaagctccggtagtggtgatga 35905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 46112487 - 46112631
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  ||  |||||||||| ||||||||||||||| | ||||  ||| |||||||    
T  46112487 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgttattgaattttgcaaaatatctatttagtccatgaattttacagacgtc 46112586  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||| || |||| |||||||   ||||||||||||||    
T  46112587 catcaaaatggtccctccgttcaaaagctatgttagtggtgatga 46112631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 17515310 - 17515457
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||| |||||| |||||||||  |   |||||||||||||||||||||||||| ||||||  ||| | |||||    
T  17515310 gactaatacctcaaattcttccttgaatttttaaaaattggccaaattcatcgctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 17515409  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||| || | |||||||| | |||||||||||||||||||    
T  17515410 catcaaaatggtccctctgtccaaaatcaccgttagtggtgatgatgt 17515457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 23293314 - 23293167
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaattttca--tgaattttgcgaaatatctatttagttcctgaattataga--cgtc 162  Q
    ||||||||||||| |||  ||||| |||||  ||||||| ||||||||  |   |||||||||||||||||||||||||| | |||||| || |  ||||    
T  23293314 gactaatacctcaaatttgttcttgaatttcgaaaaatcagccaaattcgcccttgaattttgcgaaatatctatttagtccatgaattttacaaacgtc 23293215  T
Q  163 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||| ||||  |||||||||||| |||||||||||||||||||    
T  23293214 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 23293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 41977750 - 41977894
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtc 162  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||   | | ||||||| |||||||||| | ||||| |||||||| ||  ||||||    
T  41977750 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaatttggcgaaatatcaaattagtccctgaattttacagacgtc 41977849  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    | |||||||||| || ||||||||||||  ||||| |||||||||    
T  41977850 cgtcaaaatggtccctccgtccaaaagcttcgttaatggtgatga 41977894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 120 - 209
Target Start/End: Original strand, 42279562 - 42279654
Alignment:
Q  120 gaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||| ||||||||||||||| ||||||  ||| ||||||| ||||||||||| || |||||||||||| | |||||||||||||||||    
T  42279562 gaattttgcaaaatatctatttagtccctgaattttacagacgtctatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42279654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 46197774 - 46197867
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||| ||||||||||||||||||||||  ||| |||||||||| |||||||| ||  ||||||||||  ||||||||| |||||||||    
T  46197774 tgaattttgcaaaatatctatttagttcctgaattttacagacgtccattaaaatggtcccttcgtccaaaagttccgttagtgatgatgatgt 46197867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 115 - 209
Target Start/End: Complemental strand, 48830900 - 48830803
Alignment:
Q  115 ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||  |||||||||||||||||   |||||| ||  ||||||||||||||||||||  |||||||||||| | |||||||||||||||||    
T  48830900 ttcatgaatttaacgaaatatctatttagtctttgaattttacggacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 48830803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 3152362 - 3152215
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| ||| || |||||||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||  ||| |||||||    
T  3152362 gactaatacctcaaatttatccttaaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 3152263  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||   || || |||||||||||  |||||| | ||||||||||    
T  3152262 catcaaatccgtccctccgtccaaaaggtccgttaatagtgatgatgt 3152215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 23291570 - 23291658
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||| | |||| | ||| |||||||||||||||||||||||  | | ||||||||||||||||||||||||||  |||||||    
T  23291570 gactaataccttaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaatt 23291658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 2377032 - 2377173
Alignment:
Q  70 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtccat 165  Q
    |||||||||| |||| || || |||||| |||||| | |||||||  | | |||||||||| ||| || ||||||||  ||||||| ||  |||||||||    
T  2377032 taatacctcaaattcgtttttgaattttcaaaaattgaccaaattcgtccctgaattttgcaaaaaatatatttagtctctgaattttacagacgtccat 2377131  T
Q  166 caaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    ||||||||| || ||||| |||||| ||||||||||||||||    
T  2377132 caaaatggttcctccgtctaaaagctccgttagtggtgatga 2377173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 48829356 - 48829435
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaattt--tcatgaattttgcgaaatatctatttagt 144  Q
    ||||||||||||| |||| | ||| |||||| |||| || |||||||||  || ||||||||||||||||||||||||||    
T  48829356 gactaatacctcaaattcgtccttgaattttcaaaattcagccaaatttattcctgaattttgcgaaatatctatttagt 48829435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 53094368 - 53094274
Alignment:
Q  61 aaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||| |||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  53094368 aaatatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 53094274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 144
Target Start/End: Complemental strand, 46114196 - 46114115
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaa-tcggccaaatttt--catgaattttgcgaaatatctatttagt 144  Q
    |||||| ||||||| ||| || ||| |||||||||||| ||||||||||||   | ||||||||||||||||||||||||||    
T  46114196 tgactactacctcaaatttatccttgaattttaaaaaaatcggccaaatttgtccttgaattttgcgaaatatctatttagt 46114115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 611311 - 611223
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||||||||||| ||||||||  | | |||||||| ||||||| ||||||||  ||||||||    
T  611311 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaatttttcgaaatagctatttagcccctgaatt 611223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 38191895 - 38191983
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | |||||||||| |||||| |||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  38191895 gactaatacctcaaattcgtccttaaattttgaaaaattggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 38191983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 38193599 - 38193511
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  38193599 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 38193511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 41979441 - 41979353
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  41979441 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 41979353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 46308807 - 46308895
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  46308807 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 46308895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 104
Target Start/End: Original strand, 27897148 - 27897188
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaat 104  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  27897148 tttgactaatacctcaaattctttcttaaattttaaaaaat 27897188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 51686483 - 51686404
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 144  Q
    ||||||||||||| |||| | |||||||||| ||||||| ||||||||  | | | ||||||||||||||| ||||||||    
T  51686483 gactaatacctcaaattcgtccttaaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatttatttagt 51686404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 54412611 - 54412548
Alignment:
Q  92 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| || ||||||  | | |||||||||||| ||||||||||||||||||||||    
T  54412611 aattttaaaaaattggtcaaattcgtccttgaattttgcgagatatctatttagttcctgaatt 54412548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 206
Target Start/End: Complemental strand, 7884924 - 7884873
Alignment:
Q  156 agacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||||||||||||  |||||||||||  ||||||||||||||||    
T  7884924 agacgtccatcaaaatggtccctccgtccaaaagttccgttagtggtgatga 7884873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 46609147 - 46609237
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||| |||| |||| ||||| |||||| ||||||||||||| ||  | | ||||||||| |||||||| | ||||| ||||||||    
T  46609147 ttgactaatatctcaaattcgttcttgaattttgaaaaatcggccaatttcgtccctgaattttgtgaaatatcaaattagtccctgaatt 46609237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 7884988 - 7884942
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaat 113  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||    
T  7884988 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaat 7884942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 30598336 - 30598413
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 141  Q
    |||||||||||||| |||| | ||| |||||| ||||||||| ||||||  | | |||||||||||||||| ||||||    
T  30598336 tgactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaatttgtccctgaattttgcgaaatagctattt 30598413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 153
Target Start/End: Complemental strand, 42282559 - 42282474
Alignment:
Q  70 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||| |||| | ||| |||||| ||||||| | ||||||  ||  |||||||||||||||||||||||||| | ||||||    
T  42282559 taatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtttctgaattttgcgaaatatctatttagtccttgaatt 42282474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 141
Target Start/End: Original strand, 44267980 - 44268057
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 141  Q
    |||||||||||||| |||| | ||| |||||| ||||||||||||||||  |   |||||||||||||||| ||||||    
T  44267980 tgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatctctgaattttgcgaaatagctattt 44268057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 156 - 209
Target Start/End: Complemental strand, 44276247 - 44276193
Alignment:
Q  156 agacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||| |||||||||||||||  |||||||||||| | |||||||||||||||||    
T  44276247 agacgcccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 44276193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 44794207 - 44794354
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattat--agacgt 161  Q
    |||||||||||||| |||| | ||| |||||| |||| |||||||| ||  | | |||||||||||||||||| | ||||| |||||||| |  ||| ||    
T  44794207 tgactaatacctcaaattcgtccttgaattttgaaaa-tcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaattttgcagaagt 44794305  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||| | || || |||||||||||  |||||| | ||||||||||    
T  44794306 ccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 44794354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 3150252 - 3150340
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  3150252 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 3150340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 44795979 - 44795891
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| |||||||||| || ||  ||| |||||||||||||||||| | ||||| | ||||||    
T  44795979 gactaatacctcaaattcgtccttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccatgaatt 44795891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 54900163 - 54900075
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | || || ||||||||    
T  54900163 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaatttgtccctgaatt 54900075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 600805 - 600853
Alignment:
Q  159 cgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 206  Q
    ||||||||||||||||||  ||||| |||||| ||||||||||||||||    
T  600805 cgtccatcaaaatggtccctccgtctaaaagctccgttagtggtgatga 600853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 153
Target Start/End: Complemental strand, 2379071 - 2378984
Alignment:
Q  68 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||| |||| | ||| |||||||||||||||| ||| ||  | | |||||||||| ||||| ||||||||| | ||||||    
T  2379071 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcaaaatagctatttagtccttgaatt 2378984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 4e-38; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 8609933 - 8609787
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    ||||||||||||||| |||| ||||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| |||||    
T  8609933 ttgactaatacctcaaattcgttcttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 8609834  T
Q  161 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||    
T  8609833 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 8609787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 13282478 - 13282625
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| | |||||    
T  13282478 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacaaacgtc 13282577  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||| || |||||||||||| |||||||||||||||||||    
T  13282578 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 13282625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 38547227 - 38547372
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaat--tttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    ||||||||||||||  ||| | ||| ||||||||||||||||||||||   | |||||||||||||||||||| | ||||| ||||||  ||| ||||||    
T  38547227 tgactaatacctcaagttcgtccttgaattttaaaaaatcggccaaatacgtccatgaattttgcgaaatatcaaattagtccctgaattttacagacgt 38547326  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    ||||||||||||| || || ||||||||| ||||||||||||||||    
T  38547327 ccatcaaaatggtccctccatccaaaagctccgttagtggtgatga 38547372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 41042728 - 41042581
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaattataga--cgtc 162  Q
    ||||||||||| | || | | ||| ||||||||||||| ||||||||||   | ||||||||| |||||||||||||||| |||||||| || |  ||||    
T  41042728 gactaataccttaaatccgtccttgaattttaaaaaattggccaaatttgtccctgaattttgtgaaatatctatttagtccctgaattttacaggcgtc 41042629  T
Q  163 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||    
T  41042628 catcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 41042581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 26242460 - 26242311
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    |||| ||||||||||  ||| ||||| |||||| ||||||| ||||||||  | | | ||||||||||||||||||||||||  |||||  ||| |||||    
T  26242460 ttgattaatacctcaatttcgttcttgaattttcaaaaatcagccaaattcgtccctaaattttgcgaaatatctatttagtctctgaattttacagacg 26242361  T
Q  161 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||||| || |||||||||||| |||||||||| ||||||||    
T  26242360 tccatcaaaatggtccctccgtccaaaagctccgttagtggcgatgatgt 26242311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 13108480 - 13108336
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    |||||||| |||| |||| | ||| ||||||||||||||||| ||||   | | |||||||||||||||||| | ||||| ||||||  ||| |||||||    
T  13108480 gactaataactcaaattcgtccttgaattttaaaaaatcggctaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 13108381  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||| || ||||||||||||  |||||||||||||||    
T  13108380 catcaaaatggtccctccgtccaaaagcttcgttagtggtgatga 13108336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 41825734 - 41825641
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||||||||||||||||| ||||||  ||| |||||||||||||||||||| | |||||||||||| | |||||| ||||||||||    
T  41825734 tgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtcactccgtccaaaagctctgttagtagtgatgatgt 41825641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 42943515 - 42943427
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||||    
T  42943515 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaatt 42943427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 209
Target Start/End: Original strand, 42941777 - 42941921
Alignment:
Q  70 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccat 165  Q
    |||||||||| |||| | ||| |||||||||||||| ||||||||  | | ||||||||| ||||||| |||||||| ||||||  ||| ||| ||||||    
T  42941777 taatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccctgaattttgagaaatatttatttagtccctgaattttacagatgtccat 42941876  T
Q  166 caaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||| || || |||||||||| | |||||||||| ||||||||    
T  42941877 caaaatagtccctccgtccaaaatctccgttagtggagatgatgt 42941921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 5038153 - 5038063
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||||| |||| | ||| |||||||||||||||| ||||||  ||| |||||||||||||||| ||||||||| ||||||||    
T  5038153 tttgactaatacctcaaattcgt-cttgaattttaaaaaatcggtcaaattcgttcttgaattttgcgaaatagctatttagtccctgaatt 5038063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 122 - 209
Target Start/End: Complemental strand, 13486186 - 13486096
Alignment:
Q  122 attttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||| || | |||||||||| || ||||| ||||||||||    
T  13486186 attttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctctgtccaaaagctccattagtagtgatgatgt 13486096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 7745202 - 7745109
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||||||| |||||||| |||| ||| ||  ||| ||||||||||||||||  || ||||||||| |||||||||||||||||||    
T  7745202 tgaattttgcgaaatatttatttagtccctgtattttacagacatccatcaaaatggtccctccatccaaaagctccgttagtggtgatgatgt 7745109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 9673255 - 9673162
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||| |||||||||||||| | ||||||  ||| ||||||||||||||||||| || ||||| ||||||  ||||||||||||||||||    
T  9673255 tgaattttgtgaaatatctatttaatccctgaattttacagacgtccatcaaaatggtccctccgtctaaaagcttcgttagtggtgatgatgt 9673162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 22272390 - 22272483
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||| |||||||||||||| ||||||  ||| | |||||||||||||| || || || ||||||||| |||||||||||||||||||    
T  22272390 tgaattttgcgtaatatctatttagtccctgaattttacaaacgtccatcaaaatagtccctccatccaaaagctccgttagtggtgatgatgt 22272483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 5036446 - 5036557
Alignment:
Q  68 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtcc 163  Q
    |||||||||||| |||| | |||||||||||||||||| | ||||||  | | ||||||||| |||||||||||||||| | ||||  ||| |||||||     
T  5036446 actaatacctcaaattcgtccttaaattttaaaaaatccgtcaaattcgtccctgaattttgtgaaatatctatttagtccttgaattttacagacgtct 5036545  T
Q  164 atcaaaatggtc 175  Q
    ||||||||||||    
T  5036546 atcaaaatggtc 5036557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 22273980 - 22273892
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaattt-tc-atgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||  | ||| |||||||||||||||||||||||| ||  |||||||||| ||||||||||||||| ||||||||    
T  22273980 gactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtctctgaattttgcaaaatatctatttagtccctgaatt 22273892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 34681155 - 34681076
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 144  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||||||  | | ||||||||||||||||||||||||||    
T  34681155 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagt 34681076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 26238726 - 26238805
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 144  Q
    ||||||||||||| |||| | ||| |||||| ||||||| ||||||||  | | ||||||||||||||||||||||||||    
T  26238726 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagt 26238805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 27691154 - 27691260
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||  ||| |||||||    
T  27691154 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 27691253  T
Q  163 catcaaa 169  Q
    |||||||    
T  27691254 catcaaa 27691260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 13106801 - 13106892
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||| | |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  13106801 tttgactaataccttaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatt 13106892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 57 - 153
Target Start/End: Complemental strand, 38548930 - 38548832
Alignment:
Q  57 atataaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||| || |||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||| | ||||||||    
T  38548930 atatatatatgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattaatccctgaatt 38548832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 33762803 - 33762714
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||| ||||||||| | ||||| ||||||||    
T  33762803 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatt 33762714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 40339770 - 40339677
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||| || |||||||||||||||| | ||||  ||| ||| ||||||||||||||| ||  | ||||||||| |||||||| ||||||||||    
T  40339770 tgaattatgtgaaatatctatttagtccatgaattttacagatgtccatcaaaatggtcccttcatccaaaagctccgttagtagtgatgatgt 40339677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 601793 - 601705
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||| ||||||||| | ||||| ||||||||    
T  601793 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaatttttcgaaatatcaaattagtccctgaatt 601705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 27692926 - 27692838
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||| ||||||| | ||||| ||||||||    
T  27692926 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcaaaatatcaaattagtccctgaatt 27692838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 9672029 - 9672065
Alignment:
Q  117 catgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||||||||||||||||| || |||||    
T  9672029 catgaattttgcgaaatatctatttagtccccgaatt 9672065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 63 - 209
Target Start/End: Original strand, 27087279 - 27087430
Alignment:
Q  63 atttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttataga 158  Q
    ||||||||||||||||| |||| | |||||||||||||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| | |    
T  27087279 atttgactaatacctcaaattcgtccttaaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacaaa 27087378  T
Q  159 cgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||||| ||| |||||||||||| |||||||||||||||||||    
T  27087379 cgtccatcaaaatggcccatccgtccaaaagctccgttagtggtgatgatgt 27087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 31238621 - 31238475
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    ||||||||||||||| |||  | ||| ||||||||||||||||||||||||   | |||||||||||||||||||||||||| ||||||  ||| |||||    
T  31238621 ttgactaatacctcaaatttgtccttgaattttaaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 31238522  T
Q  161 tccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 206  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||||    
T  31238521 tccatcaaaatggtccatctgtccaaaagctccgttagtggtgatga 31238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 4856092 - 4855946
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    ||||||||||||||| |||| | ||| ||||||||||||||||||||||   | | |||||||||||||||||| | ||||| ||||||  ||| |||||    
T  4856092 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 4855993  T
Q  161 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||||| || |||||||||||| |||||| |||||||||    
T  4855992 tccatcaaaatggtccctccgtccaaaagctccgttaatggtgatga 4855946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 25278494 - 25278348
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    ||||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||||||||| ||||||||| | ||||  ||| | |||    
T  25278494 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtccttgaattttacatacg 25278395  T
Q  161 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||    
T  25278394 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 25278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 6818803 - 6818658
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgt 161  Q
    |||||||||||||| |||| | ||| ||||||||||||||||||||| |  | | || |||| || ||||||||||||||| |||||||| ||  |||||    
T  6818803 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaactcgtccctggatttagcaaaatatctatttagtccctgaattttacagacgt 6818704  T
Q  162 ccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||||||  |||||||||||| ||||||||||||||||    
T  6818703 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6818658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 34778262 - 34778118
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtc 162  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||   | | |||||||||||||||||| | ||||| |||||||| ||  || |||    
T  34778262 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaatacgtccctgaattttgcgaaatatcaaattagtccctgaattttacagatgtc 34778163  T
Q  163 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 206  Q
    ||||||||||||||  |||||||||||| ||||||||||||||||    
T  34778162 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 34778118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 2869579 - 2869726
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||||||  | | ||||||||||||||||||||||||||  || ||  ||| |||||||    
T  2869579 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtctctaaattttacagacgtc 2869678  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||| || |||||||||||| | |||||||||||||||||    
T  2869679 catcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 2869726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 64 - 209
Target Start/End: Complemental strand, 51896279 - 51896129
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagac 159  Q
    ||||||| |||||||| || | | |||||||||||||||||| | |||||||   | |||||||||||||||||||||||||| ||||||  ||| |||     
T  51896279 tttgactgatacctcaaatccgtccttaaattttaaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagtccctgaattttacagat 51896180  T
Q  160 gtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||| || || |||||||||||| | |||||||||||||||||    
T  51896179 gtccatcaaaatagtccctccgtccaaaagctctgttagtggtgatgatgt 51896129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 15104495 - 15104588
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggtcc-accgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||||||||||||||||| ||||||  ||| |||||||||||||||||||||  |||||||||||| || ||||||||||||||||    
T  15104495 tgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccttccgtccaaaagctccattagtggtgatgatgt 15104588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 37344342 - 37344486
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||||||||| |||||||||   ||||  ||| | |||||    
T  37344342 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatacctatttagtctttgaattttacatacgtc 37344441  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||| || |||||||||||| ||||||||||||||||    
T  37344442 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 37344486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 31236816 - 31236907
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||||| |||| | ||| |||||||||||||||| |||||||   | |||||||||||||||||||||||||||||||||||    
T  31236816 tttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaatttgtccctgaattttgcgaaatatctatttagttcctgaatt 31236907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 3013601 - 3013447
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    |||||||||||||| |||| | ||| |||||||||| ||| | ||||||  | |||||||||||||||||||||||||||| ||||||  ||| ||||||    
T  3013601 tgactaatacctcaaattcgtccttgaattttaaaacatcagtcaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgt 3013502  T
Q  162 c------catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |      ||||||||| || || |||||||||||| |||||||||||||||||||    
T  3013501 ccatggacatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 3013447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 60 - 205
Target Start/End: Complemental strand, 50556228 - 50556078
Alignment:
Q  60 taaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttat 155  Q
    |||||| |||||||| |||| |||| |  || |||||||||||||| | ||||||  |   |||||||||||||||||||||||||| ||| ||  |||     
T  50556228 taaattagactaatatctcaaattcgtctttgaattttaaaaaatcagtcaaattcgtctctgaattttgcgaaatatctatttagtccctaaattttac 50556129  T
Q  156 agacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatg 205  Q
    ||||||| ||||||||||| || |||||||||||| |||||||||||||||    
T  50556128 agacgtctatcaaaatggtccctccgtccaaaagctccgttagtggtgatg 50556078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 3011858 - 3011943
Alignment:
Q  70 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||| |||| | |||||||||||||||||| | ||||||  ||| ||||||||||||||||||||||||||  |||||||    
T  3011858 taatacctcaaattcgtccttaaattttaaaaaatcagtcaaattcgttcctgaattttgcgaaatatctatttagtctctgaatt 3011943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 25279078 - 25278989
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||| |||| | ||| |||||| ||||||| ||||||||  ||| | |||||||||||||||||||||||| ||||||||    
T  25279078 tgactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgttcctaaattttgcgaaatatctatttagtccctgaatt 25278989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 141
Target Start/End: Complemental strand, 37088226 - 37088149
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 141  Q
    |||||||||||||| |||| | ||| |||||||||||||||||||||||  ||| |||||||||||||||| ||||||    
T  37088226 tgactaatacctcaaattcttccttgaattttaaaaaatcggccaaattcgttcctgaattttgcgaaatagctattt 37088149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 46583681 - 46583533
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    |||||||||||||| |||| | ||| |||||| ||||||||| ||| |||   | |||||||||||||||||| | ||||| ||||||  ||| ||||||    
T  46583681 tgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 46583582  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||| | || || |||||||||||  |||||| ||||||||||||    
T  46583581 ccatcaaatttgtccctccgtccaaaaggtccgttaatggtgatgatgt 46583533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 25278852 - 25278933
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 144  Q
    ||||||||||||||| |||||| ||| |||||| ||||||| | ||||||  | | ||||||||||||||||||||||||||    
T  25278852 ttgactaatacctcaaattcatccttgaattttcaaaaatcagtcaaatttgtccctgaattttgcgaaatatctatttagt 25278933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 25276739 - 25276830
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  25276739 tttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatcaaattagtccctgaatt 25276830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 153
Target Start/End: Original strand, 50554164 - 50554251
Alignment:
Q  68 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||  ||||| ||||||||||||||||||    
T  50554164 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtaaaatagctatttagttcctgaatt 50554251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 153
Target Start/End: Original strand, 51894570 - 51894655
Alignment:
Q  70 taatacctcatattcattcttaaattttaaaaaatcggccaaattt-tca-tgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||| ||| |||| ||||| ||||||||||||| || ||||||| ||  ||||||||||||||||| |||||||| ||||||||    
T  51894570 taatacatcaaattcgttcttgaattttaaaaaatgggtcaaatttgtctctgaattttgcgaaatatatatttagtccctgaatt 51894655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 26223584 - 26223675
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||||| |||| | ||| |||||| ||||||||| ||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  26223584 tttgactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 26223675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 52641888 - 52641967
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 144  Q
    ||||||||||||| |||| | ||| |||||| ||||||| ||||||||  | | ||||||||||||||||| ||||||||    
T  52641888 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaattcgtccctgaattttgcgaaatatatatttagt 52641967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 34776569 - 34776657
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||| ||||||||| | ||||| ||||||||    
T  34776569 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatt 34776657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 37346051 - 37345963
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| |||||||| |||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  37346051 gactaatacctcaaattcgtccttgaattttgaaaaatcgaccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatt 37345963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 46582010 - 46582098
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||  | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  46582010 gactaatacctcaaatttgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 46582098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 9e-36; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 65 - 206
Target Start/End: Original strand, 17574316 - 17574462
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    ||||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||  ||| |||||    
T  17574316 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 17574415  T
Q  161 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||    
T  17574416 tccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 17574462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 7267843 - 7267987
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaattt-tca-tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| ||||||||||||||| |||||||  ||| |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  7267843 gactaatacctcaaattcgtccttgaattttaaaaaatcgtccaaattcgtcactgaattttgcgaaatatctatttagtccctgaattttacagacgtc 7267942  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||| | || |||||||||||| ||||||||||||||||    
T  7267943 catcaaaatgatccctccgtccaaaagctccgttagtggtgatga 7267987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 36057737 - 36057590
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||||||  | | |||||||||||||||||||||||||  ||||||  ||| |||||||    
T  36057737 gactaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagaccctgaattttacagacgtc 36057638  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||| || |||||||||||| |||||| ||||||||||||    
T  36057637 catcaaaatggtccctccgtccaaaagctccgttaatggtgatgatgt 36057590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 34327635 - 34327782
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| ||||||  ||||| |||||||||  |   |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  34327635 gactaatacctcaaattcgtccttgaattttctaaaattggccaaattcgtcgctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 34327734  T
Q  163 catcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||| | |||||||||||| | |||||||||||||||||    
T  34327735 catcaaaatggtctctccgtccaaaagctctgttagtggtgatgatgt 34327782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 12738827 - 12738737
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||||    
T  12738827 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatt 12738737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 12801650 - 12801560
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| ||||||||    
T  12801650 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtacctgaattttgcgaaatatctatttagtccctgaatt 12801560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 2179787 - 2179931
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||  | ||| |||||||||||||||| ||||||  | | ||||||||| |||||||||||||| | ||||||  ||| |||| ||    
T  2179787 gactaatacctcaaatttgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgtgaaatatctatttaatccctgaattttacagacatc 2179886  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||| || |||||||||||| || |||||||||||||    
T  2179887 catcaaaatggtccctccgtccaaaagctccattagtggtgatga 2179931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 121 - 206
Target Start/End: Complemental strand, 30468348 - 30468260
Alignment:
Q  121 aattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||||||||||||||| | |||||| ||  ||||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  30468348 aattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 30468260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 205
Target Start/End: Original strand, 8539669 - 8539818
Alignment:
Q  61 aaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttata 156  Q
    |||| |||||||||||||| |||| | ||| |||||| |||||||   ||||||  ||| |||||||||||||||||||||||||| ||||||  ||| |    
T  8539669 aaatatgactaatacctcaaattcgtccttgaattttgaaaaatcaatcaaattcgttcttgaattttgcgaaatatctatttagtccctgaattttaca 8539768  T
Q  157 gacgtccatcaaaatggtc-caccgtccaaaagccccgttagtggtgatg 205  Q
     |||||||||||||| ||| | || ||||||||| ||||||||| |||||    
T  8539769 aacgtccatcaaaatagtcgctccatccaaaagctccgttagtgttgatg 8539818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 18625078 - 18624985
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaattataga--cgtccatcaaaatggtcc-accgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||| |||||||||||||||| |||||||| || |  ||||||||||||||||||  |||||||||||| |||||||| ||||||||||    
T  18625078 tgaattttgtgaaatatctatttagtccctgaattttacactcgtccatcaaaatggtccttccgtccaaaagctccgttagtagtgatgatgt 18624985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 30463900 - 30463988
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||||    
T  30463900 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaatt 30463988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 8541360 - 8541272
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| |  || |||||||||||||||||||||||  | | |||||||||||||||||||||||||| | ||||||    
T  8541360 gactaatacctcaaattcgtcattgaattttaaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccttgaatt 8541272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 2852886 - 2852974
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||||||||||||| ||| ||  | | |||||||||||||||||| | ||||||||||||||    
T  2852886 gactaatacctcaaattcgtccttgaattttaaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatt 2852974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 28813858 - 28813766
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaa--tcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||||| |||| | ||| ||||| ||||||  | |||||||||  | | |||||||||||||||||||||||||| ||||||||    
T  28813858 ttgactaatacctcaaattcgtccttgaatttaaaaaaaaattggccaaattcgtccttgaattttgcgaaatatctatttagtccctgaatt 28813766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 21843081 - 21842993
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||| |||   |||||||||||||||||||| | ||||| ||||||||    
T  21843081 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccatgaattttgcgaaatatcaaattagtccctgaatt 21842993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 169
Target Start/End: Complemental strand, 24541337 - 24541230
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    |||||||||||||| |||| |  || |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||  ||| ||||||    
T  24541337 tgactaatacctcaaattcgtcattgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 24541238  T
Q  162 ccatcaaa 169  Q
    ||||||||    
T  24541237 ccatcaaa 24541230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 153
Target Start/End: Complemental strand, 43492201 - 43492134
Alignment:
Q  88 cttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||| ||||||| ||||| ||  | | |||||||||||||||||||||||||| ||||||||    
T  43492201 cttaaattttcaaaaatcagccaagttcatccctgaattttgcgaaatatctatttagtccctgaatt 43492134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 7269536 - 7269447
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||| |||| |  || ||||||||||||||||| || ||  | | |||||||||||||||||| | ||||| ||||||||    
T  7269536 tgactaatacctcaaattcgtctttgaattttaaaaaatcggctaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 7269447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 35395389 - 35395446
Alignment:
Q  121 aattttgcgaaatatctatttagttcctgaatt--atagacgtccatcaaaatggtcc 176  Q
    |||| ||||||||||| ||||||||||||||||   |||||||||||||||| |||||    
T  35395389 aattatgcgaaatatcaatttagttcctgaatttgttagacgtccatcaaaaaggtcc 35395446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 141
Target Start/End: Complemental strand, 34328916 - 34328840
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 141  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||||||  | |||||||||||| ||||| ||||||    
T  34328916 gactaatacctcaaattcgtccttgaattttcaaaaatcggtcaaattcgtccatgaattttgcaaaatagctattt 34328840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 34777041 - 34776895
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    |||| |||||||||| |||| ||||||||||||||||||| |||||||||  ||| |||||||||||||||||||||||||| ||||||  ||| |||||    
T  34777041 ttgattaatacctcaaattcgttcttaaattttaaaaaattggccaaattcattcctgaattttgcgaaatatctatttagtccctgaattttacagacg 34776942  T
Q  161 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||||| || |||||||||| | ||||||||| ||||||    
T  34776941 tccatcaaaatggtccctccgtccaaaaactccgttagtgatgatga 34776895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 39859353 - 39859209
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||  | | |||||||||||||||||||||||||| | ||||  ||| |||||||    
T  39859353 gactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgtc 39859254  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    | |||||||||| || |||||||||||| ||||||||||||||||    
T  39859253 cgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 39859209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 13168145 - 13168267
Alignment:
Q  92 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt---tcctgaa--ttatagacgtccatcaaaatggtcca-ccgtcc 183  Q
    |||||||||||||||||||||||  | | ||||||||||||||||||||||||||   |||||||  ||| |||||||||||||||||||||| ||||||    
T  13168145 aattttaaaaaatcggccaaattcgtccttgaattttgcgaaatatctatttagtccctcctgaattttacagacgtccatcaaaatggtccatccgtcc 13168244  T
Q  184 aaaagccccgttagtggtgatga 206  Q
    |||||| ||||||||||||||||    
T  13168245 aaaagctccgttagtggtgatga 13168267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 37115650 - 37115503
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtc 162  Q
    ||||||||||||| |||| |  || |||||||||||||| | ||||||  ||| |||||||||| ||||||||||||||| |||||||| ||  ||||||    
T  37115650 gactaatacctcaaattcgtcattgaattttaaaaaatcagtcaaattcgttcctgaattttgcaaaatatctatttagtacctgaattttacagacgtc 37115551  T
Q  163 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||| ||||  |||||||||||| |||||||||||||||||||    
T  37115550 catcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 37115503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 6602335 - 6602479
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    |||||||| |||| ||||   ||| ||||||||||||||||| ||| ||   | |||||||||||||||||||||||||| ||||||  ||| |||||||    
T  6602335 gactaataactcaaattcgaccttgaattttaaaaaatcggctaaacttatccctgaattttgcgaaatatctatttagtccctgaattttacagacgtc 6602434  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||| || |||||||||||| ||||||||||||||||    
T  6602435 catcaaaatggtccctccgtccaaaagctccgttagtggtgatga 6602479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 209
Target Start/End: Complemental strand, 24228530 - 24228386
Alignment:
Q  70 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccat 165  Q
    ||||||||||  ||| ||||| ||||||||||||| |||||||||  | | ||||||||||||||||||||||||||  |||||  ||| ||||||||||    
T  24228530 taatacctcaatttcgttcttgaattttaaaaaattggccaaattcgtccctgaattttgcgaaatatctatttagtctctgaattttacagacgtccat 24228431  T
Q  166 caaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||| ||  ||||||||||| || ||||||||||||||||    
T  24228430 caaaatggtcccttcgtccaaaagctccattagtggtgatgatgt 24228386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 47386334 - 47386186
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgt 161  Q
    |||||||||||||| |||| | ||| |||||||||||||| | ||||||  | | ||||||||||||||||| ||||||||  || |||| ||  |||||    
T  47386334 tgactaatacctcaaattcgtcctttaattttaaaaaatcagtcaaattcgtccttgaattttgcgaaatatttatttagtctctaaattttacagacgt 47386235  T
Q  162 ccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||||   |||||||||||| |||||||||||||||||||    
T  47386234 ccatcaaaatggtcattccgtccaaaagctccgttagtggtgatgatgt 47386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 30940549 - 30940402
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattataga--cgtc 162  Q
    ||||||||||| | |||  ||||| |||||||||||||||||||||||  |   | |||||| ||||||||||||||||| |||||||| || |  |||     
T  30940549 gactaataccttaaatttgttcttgaattttaaaaaatcggccaaattcgtctcttaattttacgaaatatctatttagtccctgaattttacaaacgtt 30940450  T
Q  163 catcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||||    
T  30940449 catcaaaatggtctctccgtccaaaagctccgttagtggtgatgatgt 30940402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 67 - 209
Target Start/End: Complemental strand, 38474267 - 38474120
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgtc 162  Q
    ||||||||||||| |||  | ||  |||||| ||||||||| ||||||  | | |||||||||||||||||||||||||| | |||||| ||  |||| |    
T  38474267 gactaatacctcaaattagtcctcgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccttgaattttacagacgcc 38474168  T
Q  163 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
     |||||||||||||| |||||||||||| |||||||||||||||||||    
T  38474167 tatcaaaatggtccatccgtccaaaagctccgttagtggtgatgatgt 38474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 92 - 206
Target Start/End: Original strand, 45359361 - 45359480
Alignment:
Q  92 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaa 186  Q
    |||||||||||||||| |||||   | | |||||||||||||||||||||||||| | ||||  ||| ||||||||||||||||||| || || ||||||    
T  45359361 aattttaaaaaatcggtcaaatccgtccttgaattttgcgaaatatctatttagtccttgaattttacagacgtccatcaaaatggtccctccatccaaa 45359460  T
Q  187 agccccgttagtggtgatga 206  Q
    ||| ||||||||||||||||    
T  45359461 agctccgttagtggtgatga 45359480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 13169773 - 13169684
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||| |||| | ||| |||||| |||||||||||||||||   | |||||||||||||||||||||||||| ||||||||    
T  13169773 tgactaatacctcaaattcgtccttgaattttcaaaaatcggccaaatttgtccctgaattttgcgaaatatctatttagtccctgaatt 13169684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 153
Target Start/End: Complemental strand, 35403715 - 35403620
Alignment:
Q  60 taaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||||||||| |||| | ||| |||||||||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  35403715 taaatttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 35403620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 6605488 - 6605398
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaattt--tcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||| |||||||||| |||  | ||| |||||||||||||||| |||||||  || |||||||||||||||| ||||||||| ||||||||    
T  6605488 ttgattaatacctcaaatttgtccttgaattttaaaaaatcggtcaaatttgttcctgaattttgcgaaatagctatttagtccctgaatt 6605398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 209
Target Start/End: Complemental strand, 27666191 - 27666042
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattataga--cg 160  Q
    ||||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| |||||||| || |  ||    
T  27666191 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacaaacg 27666092  T
Q  161 tccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||   ||||  ||||||||||| ||||||| | ||||||||||    
T  27666091 tccatcaaatccgtccctccgtccaaaaggcccgttaatagtgatgatgt 27666042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 39857643 - 39857733
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||| |||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||||||||||||||||||| || |||||    
T  39857643 ttgattaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtcccagaatt 39857733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 34774998 - 34775086
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||| |||| |||| |  || |||||||||||||||| ||||||  |||||||||||||| ||||| ||||||||| ||||||||    
T  34774998 gactaatatctcaaattcgtctttgaattttaaaaaatcggtcaaattcattcatgaattttgcaaaatagctatttagtccctgaatt 34775086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 37113941 - 37114029
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| ||||||||||||| || ||||||  | | |||||||||||||||||||||||||| ||| ||||    
T  37113941 gactaatacctcaaattcgtccttgaattttaaaaaattggtcaaattcatccctgaattttgcgaaatatctatttagtccctaaatt 37114029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 37796249 - 37796170
Alignment:
Q  121 aattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggt-ccaccgtccaaaagccccgttag 197  Q
    |||||||||||||||||||||||| |||||||| ||  ||||||||||||||| || || ||||||| |||| |||||||    
T  37796249 aattttgcgaaatatctatttagtccctgaattttacggacgtccatcaaaatagtccctccgtccataagctccgttag 37796170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 48852415 - 48852324
Alignment:
Q  121 aattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||| ||||||||||||| | | |||||| ||  ||||||||||||||||||| | | |||||||||| | |||||||||||||||||    
T  48852415 aattttgcaaaatatctatttaatccttgaattttacagacgtccatcaaaatggtctctcggtccaaaagctctgttagtggtgatgatgt 48852324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Original strand, 24226582 - 24226657
Alignment:
Q  68 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 141  Q
    |||||||||||| |||| | ||| |||||| ||||||||||||||||  | | |||||||||||||||| ||||||    
T  24226582 actaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtccttgaattttgcgaaatagctattt 24226657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 168
Target Start/End: Original strand, 56330 - 56435
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||| |||||||||| || ||  | | |||||||||||||||||| | ||||| ||||||  ||| |||||||    
T  56330 gactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgtc 56429  T
Q  163 catcaa 168  Q
    ||||||    
T  56430 catcaa 56435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 22155938 - 22155848
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |  ||| | ||| |||||| ||||||||||||||||  | |||||||||||| ||||| |||||| || ||||||||    
T  22155938 ttgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatt 22155848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 22211853 - 22211763
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |  ||| | ||| |||||| ||||||||||||||||  | |||||||||||| ||||| |||||| || ||||||||    
T  22211853 ttgactaatacctaaacttcgtccttgaattttcaaaaatcggccaaattcgtccatgaattttgcaaaatagctattttgtccctgaatt 22211763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 23906356 - 23906309
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt 114  Q
    ||||||||||||| |||| | ||| |||||||||||||||||||||||    
T  23906356 gactaatacctcaaattcctccttgaattttaaaaaatcggccaaatt 23906309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 35693442 - 35693347
Alignment:
Q  119 tgaattttgcgaaatatctat--ttagttcctgaattata--gacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||| ||||||| |  ||||| |||||||| ||  |||||||||||||||||| || || ||||||||  | |||||||||||||||||    
T  35693442 tgaattttgcggaatatctctaattagtccctgaattttacagacgtccatcaaaatggtccctccatccaaaagttctgttagtggtgatgatgt 35693347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 47384294 - 47384382
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||  ||||||||  | | |||||||||||||||||||| ||||| || |||||    
T  47384294 gactaatacctcaaattcgtccttgaattttgaaaaatgagccaaattcgtccttgaattttgcgaaatatctaattagtccccgaatt 47384382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 114
Target Start/End: Original strand, 13018036 - 13018080
Alignment:
Q  70 taatacctcatattcattcttaaattttaaaaaatcggccaaatt 114  Q
    |||||||||| |||||| ||| |||||||||||||| ||||||||    
T  13018036 taatacctcaaattcatccttgaattttaaaaaatcagccaaatt 13018080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 29996638 - 29996532
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||| ||  | | |||||||||||||||||| | ||| | ||||||  ||| |||||||    
T  29996638 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaattttgtccctgaattttgcgaaatatcaaattaatccctgaattttacagacgtc 29996539  T
Q  163 catcaaa 169  Q
    |||||||    
T  29996538 catcaaa 29996532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 39664893 - 39664745
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattata--gacgt 161  Q
    |||||||||||||| |||| | ||| |||||||||||||||||||||||  | |  ||||||| ||||||||||||||||| |||||||| ||  |||||    
T  39664893 tgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccccgaattttacgaaatatctatttagtccctgaattttacagacgt 39664794  T
Q  162 ccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||||||  |||||||||||| |||||||||||||||||||    
T  39664793 ccatcaaaatggtccctccgtccaaaagctccgttagtggtgatgatgt 39664745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 65 - 207
Target Start/End: Complemental strand, 44709891 - 44709744
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    ||||||||||||||| |||| | ||| |||||||||||| ||||||||||    | |||||||||||||||| ||||||||| ||||||  ||| |||||    
T  44709891 ttgactaatacctcaaattcgtccttgaattttaaaaaaccggccaaattcggccctgaattttgcgaaataactatttagtccctgaattttacagacg 44709792  T
Q  161 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgat 207  Q
    |||||||||||||| || ||||||||||||  ||||||||||||||||    
T  44709791 tccatcaaaatggtccctccgtccaaaagcttcgttagtggtgatgat 44709744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 19908391 - 19908246
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaa-tcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    ||||||||||||| |||| | ||| |||||||||||| |||||||||||  | | |||||||||||||||||||||||||| | ||||  ||| ||||||    
T  19908391 gactaatacctcaaattcgtccttgaattttaaaaaaatcggccaaattagtccctgaattttgcgaaatatctatttagtccttgaattttacagacgt 19908292  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    || |||||||||| || |||||||||||| ||||||||||||||||    
T  19908291 ccgtcaaaatggtccctccgtccaaaagctccgttagtggtgatga 19908246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 66 - 206
Target Start/End: Original strand, 16763075 - 16763220
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    |||||||||||||| |||| | ||| |||||| ||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  16763075 tgactaatacctcaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 16763174  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    ||||||||||||| || |||||||||| | | |||||||| |||||    
T  16763175 ccatcaaaatggtccctccgtccaaaatctctgttagtggcgatga 16763220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 17696200 - 17696353
Alignment:
Q  61 aaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattataga 158  Q
    ||||| || |||||||||| |||| | ||| |||||| ||||||||||||||||  | | |||||||||  ||||||||||||||| |||||||| || |    
T  17696200 aaattagattaatacctcaaattcgtccttgaattttcaaaaatcggccaaattcatccctgaattttggaaaatatctatttagtccctgaattttaca 17696299  T
Q  159 --cgtccatcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 209  Q
      |||| |||||||||||| | |||||||||||| |||||||||||||||||||    
T  17696300 aacgtcaatcaaaatggtcactccgtccaaaagctccgttagtggtgatgatgt 17696353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 40560221 - 40560370
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    ||||||||||| ||| |||| |  || |||||||||||||| ||||||||  | | |||||||||||||||||||||||||| ||||||  ||| |||||    
T  40560221 ttgactaatacttcaaattcgtctttgaattttaaaaaatcagccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacg 40560320  T
Q  161 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||| || || |||||||||||  | |||||||||||||||||    
T  40560321 tccatcaaaatagtccctccgtccaaaagttctgttagtggtgatgatgt 40560370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 2766933 - 2767081
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    ||||||||| |||| |||| | ||| |||||| ||||||||| |||| |  | | |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  2766933 tgactaatagctcaaattcgtccttgaatttttaaaaatcggtcaaactcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgt 2767032  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    | ||||||||||| || | |||||||||| |||||||||||||||||||    
T  2767033 ctatcaaaatggtccctctgtccaaaagctccgttagtggtgatgatgt 2767081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 14389234 - 14389081
Alignment:
Q  61 aaatttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattat--a 156  Q
    |||| |||||||||||||| |||| |  || |||||| ||||||||||||||||  | | |||||||||||||||||||||||||| |||||||| |  |    
T  14389234 aaatatgactaatacctcaaattcgtcattgaattttcaaaaatcggccaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttcca 14389135  T
Q  157 gacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
     | ||||||||||||||| || |||||||||||   ||||||| ||||||||||    
T  14389134 aatgtccatcaaaatggtccctccgtccaaaagtttcgttagtagtgatgatgt 14389081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 6797507 - 6797654
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||| | ||||||  || ||||||||||||| ||| |||||  ||| |||||||||||||||||||||||||| ||| ||  ||| |||||||    
T  6797507 gactaataccttaaattcatatttgaattttaaaaaattggctaaattcgttcctgaattttgcgaaatatctatttagtcccttaattttacagacgtc 6797606  T
Q  163 catcaaaatgg-tccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
     |||||||||| ||| |||||||||||| | ||||  |||||||||||    
T  6797607 tatcaaaatggttcctccgtccaaaagctctgttacgggtgatgatgt 6797654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 39455168 - 39455316
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaattt--tcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    ||||||||| |||| |||  | ||| ||||||||||||||||  |||||   || |||||||||| ||||||||||||||| | ||||  ||| ||||||    
T  39455168 tgactaatatctcaaatttgtccttgaattttaaaaaatcggttaaattcagtcctgaattttgcaaaatatctatttagtccatgaattttacagacgt 39455267  T
Q  162 ccatcaaaatggtc-caccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||||| | |||| ||||||| |||||||||| ||||||||    
T  39455268 ccatcaaaatggtctctccgttcaaaagctccgttagtggcgatgatgt 39455316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 42519346 - 42519202
Alignment:
Q  71 aatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaa-ttttgcgaaatatctatttagttcctgaa--ttatagacgtccat 165  Q
    ||||||||| |||| | ||| ||||||||||||| |  ||||||  | | |||| |||||| ||||||||||||||| ||||||  ||| ||||||||||    
T  42519346 aatacctcaaattcgtccttgaattttaaaaaattgatcaaattagtccttgaatttttgcaaaatatctatttagtccctgaattttacagacgtccat 42519247  T
Q  166 caaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||| || || ||||||||| |||||||||||||||||||    
T  42519246 caaaatggtccctccatccaaaagctccgttagtggtgatgatgt 42519202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 16377287 - 16377197
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaattataga--cgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||| ||||||||||||||| | |||||| || |  ||||||||||||||||||  |||||||||||| ||||||||||||||||    
T  16377287 tgaattttgcaaaatatctatttagtccttgaattttacatacgtccatcaaaatggtccctccgtccaaaagctccgttagtggtgatga 16377197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 19581414 - 19581493
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 144  Q
    ||||||||||||| |||| | |||||||||| ||||||| ||||||||  | | ||||||||||||||||||||||||||    
T  19581414 gactaatacctcaaattcgtccttaaatttttaaaaatcagccaaatttgtccctgaattttgcgaaatatctatttagt 19581493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 34400314 - 34400390
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 141  Q
    ||||||||||||| |||||| ||| |||||| ||||||||||||||||  | | |||||||||||||||| ||||||    
T  34400314 gactaatacctcaaattcatccttgaattttcaaaaatcggccaaattcatccctgaattttgcgaaatagctattt 34400390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 64 - 153
Target Start/End: Original strand, 16376733 - 16376824
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||||| |||| |  || |||||||||||||||| ||||||  | | |||||||| ||||||| ||||||||| ||||||||    
T  16376733 tttgactaatacctcaaattcgtctttgaattttaaaaaatcggtcaaattcgtccctgaattttacgaaatagctatttagtccctgaatt 16376824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 144
Target Start/End: Original strand, 19906685 - 19906761
Alignment:
Q  70 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 144  Q
    |||||||| | |||| | ||| |||||||||||||||| ||||||  | | ||||||||||||||||||||||||||    
T  19906685 taataccttaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagt 19906761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 39456869 - 39456781
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||| ||| |||||| ||| ||||||||||||| ||  |||||  | |||||||||||| ||||| ||||||||| ||||||||    
T  39456869 gactaatacttcaaattcatccttgaattttaaaaaattggttaaattcgtccatgaattttgcaaaatagctatttagtccctgaatt 39456781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 16764702 - 16764612
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||||| |||| | ||| |||||| | ||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  16764702 ttgactaatacctcaaattcgtccttgaattttgagaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 16764612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 14387349 - 14387437
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||| ||||||||| | ||||| ||||||||    
T  14387349 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttacgaaatatcaaattagtccctgaatt 14387437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 39663154 - 39663242
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||| | |||| | ||| |||||| ||||||||| ||||||  | | |||||||||| ||||| ||||||||| ||||||||    
T  39663154 gactaatacctaaaattcgtccttgaatttttaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatt 39663242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0564 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0564
Description:

Target: scaffold0564; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 69 - 206
Target Start/End: Original strand, 8264 - 8404
Alignment:
Q  69 ctaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaattatagacgtccatc 166  Q
    ||||||||||| |||| | ||| ||||||||||||| |||||||||  ||| |||||||||| ||||||||||||||| |||||||| || |||||||||    
T  8264 ctaatacctcaaattcgtccttgaattttaaaaaattggccaaattcgttcttgaattttgcaaaatatctatttagtccctgaattttatacgtccatc 8363  T
Q  167 aaaatggtcca-ccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||| || ||||||||||||  |||||||||||||||    
T  8364 aaaatggtacatccgtccaaaagcttcgttagtggtgatga 8404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 206
Target Start/End: Complemental strand, 35404569 - 35404425
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||||| ||| ||||||||||||||||| |||||  | | | ||||||||||||||| |||||| | ||||||  ||| |||||||    
T  35404569 gactaatacctcagattcatacttgaattttaaaaaatcggctaaattcgtccttcaattttgcgaaatatttatttaatccctgaattttacagacgtc 35404470  T
Q  163 catcaaaatggtcca-ccgtccaaaagccccgttagtggtgatga 206  Q
    || |||||||||||| |||||||||||| ||||||||||||||||    
T  35404469 caacaaaatggtccatccgtccaaaagctccgttagtggtgatga 35404425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 68 - 209
Target Start/End: Original strand, 49523125 - 49523271
Alignment:
Q  68 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtcc 163  Q
    |||||||||||| |||| |  || ||||||||||||||||| |||||  | |||||||||||||||||||||||||||| ||||||  ||| |||||| |    
T  49523125 actaatacctcaaattcgtcattgaattttaaaaaatcggctaaattcgtccatgaattttgcgaaatatctatttagtccctgaattttacagacgttc 49523224  T
Q  164 atcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||| || ||||||||||   |||||||||||||||||||    
T  49523225 atcaaaatggtccctccgtccaaaaaatccgttagtggtgatgatgt 49523271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 209
Target Start/End: Complemental strand, 41761867 - 41761723
Alignment:
Q  70 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccat 165  Q
    |||||||||| |||| | ||| |||||| ||||||||||||||||  | |   |||||||||||||||||||||||| ||||||  ||| ||||||||||    
T  41761867 taatacctcaaattcgtccttgaattttcaaaaatcggccaaattcgtcccgaaattttgcgaaatatctatttagtccctgaattttacagacgtccat 41761768  T
Q  166 caaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||| || ||||||||||||  ||||||||||||||||||    
T  41761767 caaaatggtccctccgtccaaaagcttcgttagtggtgatgatgt 41761723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 66 - 209
Target Start/End: Original strand, 41781538 - 41781686
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    |||||||||||||| |||  ||||| |||||||||||||||| ||||||  | | |||||||||| |||||| |||||||| ||||||  ||| |||| |    
T  41781538 tgactaatacctcaaatttgttcttgaattttaaaaaatcggtcaaatttgtccctgaattttgcaaaatatttatttagtccctgaattttacagacat 41781637  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||| || |||||||||||| ||||||||| |||||||||    
T  41781638 ccatcaaaatggtccctccgtccaaaagctccgttagtgatgatgatgt 41781686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 67 - 206
Target Start/End: Original strand, 51011926 - 51012070
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    |||||||| |||| |||| | ||| |||||||||||||||| ||||||  ||| ||||||||||||||||||||||||||  |||||  ||| |||||||    
T  51011926 gactaatatctcaaattcgtccttgaattttaaaaaatcggtcaaattctttcttgaattttgcgaaatatctatttagtctctgaattttacagacgtc 51012025  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||| || |||||||||||| | |||||| |||||||    
T  51012026 catcaaaatggtccctccgtccaaaagctctgttagtagtgatga 51012070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 67 - 209
Target Start/End: Original strand, 48813787 - 48813934
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatttt--catgaattttgcgaaatatctatttagttcctgaa--ttatagacgtc 162  Q
    ||||||||||||| |||| | ||| |||||| ||||||| |||||||||   | |||||||||| |||||| |||||||||||||||  |||||||||||    
T  48813787 gactaatacctcaaattcgtccttgaattttcaaaaatcagccaaatttatccctgaattttgcaaaatatatatttagttcctgaattttatagacgtc 48813886  T
Q  163 catcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||| ||  ||||||||||| | ||| |||||||||||||    
T  48813887 catcaaaatggtcccttcgtccaaaagctctgttggtggtgatgatgt 48813934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 20493826 - 20493915
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||| |||| |  || |||||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||||||||    
T  20493826 tgactaatacctcaaattcgtcattgaattttaaaatatcggccaaattcgttcttgaattttgcgaaatatctatttagttcctgaatt 20493915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 42980687 - 42980782
Alignment:
Q  117 catgaattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||| |||||| |||||||||| ||| |||| ||  ||||||||||||||||||||  |||||||||||| | |||||||||||||||||    
T  42980687 catgaattttacgaaatttctatttagtcccttaattttacagacgtccatcaaaatggtccctccgtccaaaagctctgttagtggtgatgatgt 42980782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 35401747 - 35401837
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||||| |||| | ||| |||||||||||||||||||||||  | | ||||||||| |||||||||||||||| | ||||||    
T  35401747 ttgactaatacctcaaattcgtccttgaattttaaaaaatcggccaaattcgtccctgaattttgtgaaatatctatttagtccttgaatt 35401837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 48646817 - 48646724
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggtcc-accgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||| |||||||||||||||||| ||||||  ||| |||| | ||||||||||||||  ||||||||||||  ||||||||||||||||||    
T  48646817 tgaatttagcgaaatatctatttagtccctgaattttacagaccttcatcaaaatggtccttccgtccaaaagcttcgttagtggtgatgatgt 48646724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 2693351 - 2693230
Alignment:
Q  92 aattttaaaaaatcggccaaattt--tcatgaattttgcgaaatatctatttagttcctgaattat-agacgtccatcaaaatggtcca-ccgtccaaaa 187  Q
    |||||||||||||| |||||||||  || | ||||||||||||||||||||||||   |||||| | | | |||||||||||||||||| ||||||| ||    
T  2693351 aattttaaaaaatcagccaaatttattcctaaattttgcgaaatatctatttagtctttgaattttaaaatgtccatcaaaatggtccatccgtccataa 2693252  T
Q  188 gccccgttagtggtgatgatgt 209  Q
    |  || |||||| |||||||||    
T  2693251 gttccattagtgatgatgatgt 2693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 153
Target Start/End: Complemental strand, 49524823 - 49524734
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||||| ||||| ||||||||| ||||||||    
T  49524823 tgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttgcaaaatagctatttagtccctgaatt 49524734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 92 - 206
Target Start/End: Complemental strand, 52868248 - 52868129
Alignment:
Q  92 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt--atagacgtccatcaaaatggtc-caccgtccaaa 186  Q
    |||||||||||||||| ||||||  |  || ||||||||||||||||||||||||  |||||||  | ||||| | |||||||||||| |  ||||||||    
T  52868248 aattttaaaaaatcggtcaaattcgtctataaattttgcgaaatatctatttagtctctgaatttaacagacgcctatcaaaatggtcacttcgtccaaa 52868149  T
Q  187 agccccgttagtggtgatga 206  Q
    ||| |||||||||| |||||    
T  52868148 agctccgttagtggcgatga 52868129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 92 - 153
Target Start/End: Original strand, 39345589 - 39345652
Alignment:
Q  92 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||||||||||||  | | |||||||||||||||| ||||||||| ||||||||    
T  39345589 aattttaaaaaatcggccaaattcgtccctgaattttgcgaaatagctatttagtccctgaatt 39345652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 48645255 - 48645334
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 144  Q
    ||||||||||||| |||| | ||| |||||| ||||||| | ||||||  | ||||||||||||||||||||||||||||    
T  48645255 gactaatacctcaaattcgtccttgaattttcaaaaatcagtcaaattcgtccatgaattttgcgaaatatctatttagt 48645334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 66 - 153
Target Start/End: Original strand, 43507166 - 43507255
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  43507166 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 43507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 319273 - 319361
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||| ||  | | |||||||||||||||||| | ||||||||||||||    
T  319273 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcgaaatatcaaattagttcctgaatt 319361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 4173829 - 4173741
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  4173829 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 4173741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 33266099 - 33266011
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    |||||||| |||| |||| ||||| |||||| |||||||||| || ||  ||| |||||||||||||||||| | ||||| ||||||||    
T  33266099 gactaatatctcaaattcgttcttgaattttgaaaaatcggctaatttcgttcctgaattttgcgaaatatcaaattagtccctgaatt 33266011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 43508742 - 43508654
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  43508742 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 43508654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 43519424 - 43519512
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  43519424 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 43519512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 320990 - 320918
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatc 136  Q
    |||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | ||||||||||||||||||    
T  320990 tgactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccttgaattttgcgaaatatc 320918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Original strand, 33264382 - 33264470
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||| ||| ||  | | |||||||||| ||||||| | ||||||||||||||    
T  33264382 gactaatacctcaaattcgtccttgaattttgaaaaatcggtcaatttcgtccctgaattttgcaaaatatcaaattagttcctgaatt 33264470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 9398714 - 9398807
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||| || |||||||||||  |||||||||||||||||||    
T  9398714 tgaattttgcgaaatatctatttagtccctgaattttatagacgttcatcaaaatggtccctccgtccaaaagttccgttagtggtgatgatgt 9398807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 20523391 - 20523513
Alignment:
Q  92 aattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaa 186  Q
    |||||| ||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||||||||||||||| || |||||||||    
T  20523391 aattttcaaaaatcggtcaaattcgtccttgaattttgcgaaatatctatttagtccctgaattttacagacgtccatcaaaatggtccctccgtccaaa 20523490  T
Q  187 agccccgttagtggtgatgatgt 209  Q
    ||  | |||||||||||||||||    
T  20523491 agttctgttagtggtgatgatgt 20523513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 66 - 206
Target Start/End: Complemental strand, 32439216 - 32439071
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    |||||||||||||| |||  |  || |||||||||||||||| ||||||  | | |||||||||||||||||||||||||| ||||||  ||| ||||||    
T  32439216 tgactaatacctcaaattagtcattgaattttaaaaaatcggtcaaattcgtccctgaattttgcgaaatatctatttagtccctgaattttacagacgt 32439117  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    ||||||||||||| || |||||||||||  | |||||| |||||||    
T  32439116 ccatcaaaatggtccctccgtccaaaagatctgttagtagtgatga 32439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 7373028 - 7372935
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||||||| |||||||| ||||||  ||| || |||||||||||||||| || |||||||||||| || ||||||||||||||||    
T  7373028 tgaattttgcgaaatatttatttagtccctgaattttacaggcgtccatcaaaatggtccctccgtccaaaagctccattagtggtgatgatgt 7372935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 206
Target Start/End: Original strand, 32516874 - 32517021
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagac 159  Q
    |||||||||||||||| |||| | ||| |||||||||||||||| ||||||  | | |||||||| | ||||| ||||||||  | ||||  ||| | ||    
T  32516874 tttgactaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtccctgaattttacaaaatacctatttagcccttgaattttacatac 32516973  T
Q  160 gtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    |||||||||||| || || |||||||||||| ||||||||||||||||    
T  32516974 gtccatcaaaattgtccctccgtccaaaagctccgttagtggtgatga 32517021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 10568453 - 10568546
Alignment:
Q  119 tgaattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||| ||||||||| |||||||| |||||||| ||  |||||| |||||||| ||||  |||||||||||| |||||||||||||||||||    
T  10568453 tgaatttagcgaaatatttatttagtccctgaattttacagacgtctatcaaaatagtccctccgtccaaaagctccgttagtggtgatgatgt 10568546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 66 - 209
Target Start/End: Complemental strand, 13613707 - 13613559
Alignment:
Q  66 tgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgt 161  Q
    |||||||||||| | |||| | ||| |||||| ||||||||| ||||||  | | |||||||||||||||||| | ||||| ||||||  ||| ||||||    
T  13613707 tgactaataccttaaattcgtccttgaattttgaaaaatcggtcaaattcgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacgt 13613608  T
Q  162 ccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||| | || || |||||||||||  || ||||||||||||||||    
T  13613607 ccatcaaattagtccctccgtccaaaaggtccattagtggtgatgatgt 13613559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 10570008 - 10569929
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagt 144  Q
    ||||||||||||| |||| | ||| |||||||||||||| ||||||||  | |||||||||||| |||||||||||||||    
T  10570008 gactaatacctcaaattcgtccttgaattttaaaaaatcagccaaattcgtccatgaattttgcaaaatatctatttagt 10569929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 206
Target Start/End: Original strand, 11355223 - 11355366
Alignment:
Q  68 actaatacctcatattcattcttaaattttaaaaaatcggccaaatt-ttca-tgaattttgcgaaatatctatttagttcctgaa--ttatagacgtcc 163  Q
    |||||||||||| |||| | ||| |||||||||||||||| ||||||  ||| ||||||||  |||||||||||| | | ||||||  ||| ||||| ||    
T  11355223 actaatacctcaaattcgtccttgaattttaaaaaatcggtcaaattcgtcactgaattttatgaaatatctattaactccctgaattttacagacggcc 11355322  T
Q  164 atcaaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    | ||||||||| || |||||||||||| ||| ||||||||||||    
T  11355323 accaaaatggtccctccgtccaaaagctccggtagtggtgatga 11355366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 209
Target Start/End: Original strand, 6899541 - 6899632
Alignment:
Q  121 aattttgcgaaatatctatttagttcctgaattata--gacgtccatcaaaatggtccac-cgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||| |||||||||||||||| ||| |||| ||  ||| ||||||||||||||||   ||||||||||| ||||||||| |||||||||    
T  6899541 aattttgtgaaatatctatttagtccctaaattttacagacatccatcaaaatggtcccttcgtccaaaagctccgttagtgttgatgatgt 6899632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 209
Target Start/End: Original strand, 7049850 - 7049904
Alignment:
Q  156 agacgtccatcaaaatggtcca-ccgtccaaaagccccgttagtggtgatgatgt 209  Q
    |||||||||||||||||||||  |||||||||||| ||||| |||||||||||||    
T  7049850 agacgtccatcaaaatggtccctccgtccaaaagctccgttcgtggtgatgatgt 7049904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 32518586 - 32518498
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||||    
T  32518586 gactaatacctcaaattcgtccttgaattttgaaaaatcggccaatttcatccctgaattttgcgaaatatcaaattagtccctgaatt 32518498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 134
Target Start/End: Original strand, 7371172 - 7371244
Alignment:
Q  64 tttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaata 134  Q
    ||||||||||||||||  ||| | ||| |||||| ||||||||||||||||  | | ||||||||||||||||    
T  7371172 tttgactaatacctcaacttcgtccttgaattttcaaaaatcggccaaattggtccctgaattttgcgaaata 7371244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 153
Target Start/End: Complemental strand, 9400124 - 9400036
Alignment:
Q  67 gactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||| |||| | ||| |||||| ||||||| | ||||||  | | |||||||||||||||||||| ||||| || |||||    
T  9400124 gactaatacctcaaattcgtccttgaattttgaaaaatcagtcaaattcatccttgaattttgcgaaatatctaattagtccccgaatt 9400036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 14338543 - 14338452
Alignment:
Q  121 aattttgcgaaatatctatttagttcctgaatt--atagacgtccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||||||| |||| ||  | ||||||||  | ||||||||||||||||||| || |||| ||||||| |||||| || |||||||||    
T  14338543 aattttgcgaaatgtctaattcatccctgaatttcacagacgtccatcaaaatggtccctccgttcaaaagctccgttactgatgatgatgt 14338452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 33267117 - 33267149
Alignment:
Q  121 aattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||||||||||||||||| |||||    
T  33267117 aattttgcgaaatatctatttagttcccgaatt 33267149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 70 - 206
Target Start/End: Original strand, 1266 - 1407
Alignment:
Q  70 taatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacgtccat 165  Q
    |||||||||| || | | ||| ||||||||||||| ||  |||||  | ||||||||||  |||||||||||||||| ||||||  ||| ||||||||||    
T  1266 taatacctcaaatccgtccttgaattttaaaaaattggttaaattcgtccatgaattttatgaaatatctatttagtccctgaattttacagacgtccat 1365  T
Q  166 caaaatggt-ccaccgtccaaaagccccgttagtggtgatga 206  Q
    ||||||||| || |||||||||||| ||||||||||||||||    
T  1366 caaaatggtccctccgtccaaaagctccgttagtggtgatga 1407  T

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Target: scaffold0058 (Bit Score: 44; Significance: 5e-16; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 3292 - 3441
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    ||||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||  ||| |||||    
T  3292 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 3391  T
Q  161 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||| | || || |||||||||||  |||||| | ||||||||||    
T  3392 tccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 3441  T

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Target: scaffold0058; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 65 - 209
Target Start/End: Original strand, 4464 - 4613
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaa--ttatagacg 160  Q
    ||||||||||||||| |||| | ||| |||||| ||||||||||||| ||  | | |||||||||||||||||| | ||||| ||||||  ||| |||||    
T  4464 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggccaattttgtccctgaattttgcgaaatatcaaattagtccctgaattttacagacg 4563  T
Q  161 tccatcaaaatggt-ccaccgtccaaaagccccgttagtggtgatgatgt 209  Q
    ||||||||| | || || |||||||||||  |||||| | ||||||||||    
T  4564 tccatcaaattcgtccctccgtccaaaaggtccgttaatagtgatgatgt 4613  T

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Target: scaffold0058; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 153
Target Start/End: Complemental strand, 14434 - 14344
Alignment:
Q  65 ttgactaatacctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctatttagttcctgaatt 153  Q
    ||||||||||||||| |||| | ||| |||||| |||||||||| || ||  | | |||||||||||||||||| | ||||| ||||||||    
T  14434 ttgactaatacctcaaattcgtccttgaattttgaaaaatcggcaaatttcgtccctgaattttgcgaaatatcaaattagtccctgaatt 14344  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 436272 - 436341
Alignment:
Q  74 acctcatattcattcttaaattttaaaaaatcggccaaatt--ttcatgaattttgcgaaatatctattt 141  Q
    |||||| |||| ||||| |||||| ||||||| ||||||||  | ||| |||||||||||||||||||||    
T  436272 acctcaaattcgttcttgaattttcaaaaatcagccaaattcatccataaattttgcgaaatatctattt 436341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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