View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_low_154 (Length: 294)
Name: NF0846_low_154
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_low_154 |
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Alignment Details
Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 3 - 151
Target Start/End: Complemental strand, 15509053 - 15508905
Alignment:
| Q |
3 |
gtggattaatataaaagaaaaacctatgaaatacataaatgtacctgttttccataaatatgaatatgaatgaaagataaaaaagaagaatcttctatac |
102 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15509053 |
gtggattaatataaaagaaaaacgtatgaaatacataaatgtacctgttttccataaatatgaatatgaatgaaagataaaaaagaagaatcttctatac |
15508954 |
T |
|
| Q |
103 |
aaagctcatcttccttcccctctgagcccccttgagccaaagcacaaag |
151 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15508953 |
aaagctcatcttccttcccctctgagcccccttgagccaaagcacaaag |
15508905 |
T |
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