View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_low_158 (Length: 290)
Name: NF0846_low_158
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_low_158 |
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Alignment Details
Target: chr6 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 15307844 - 15307895
Alignment:
| Q |
89 |
catcatcaggatgaacaaaaaacggactagactgatcaagaacaatctcaga |
140 |
Q |
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| T |
15307844 |
catcaccagggtgaacaaaaaatggactagactgatcaagaacaatctcaga |
15307895 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 15313138 - 15313189
Alignment:
| Q |
89 |
catcatcaggatgaacaaaaaacggactagactgatcaagaacaatctcaga |
140 |
Q |
| |
|
||||| |||| ||||||||||| ||||||||||||||||||||||||||||| |
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| T |
15313138 |
catcaccagggtgaacaaaaaatggactagactgatcaagaacaatctcaga |
15313189 |
T |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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