View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_low_194 (Length: 252)
Name: NF0846_low_194
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_low_194 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 31596248 - 31596004
Alignment:
| Q |
1 |
cgtgcttgatgatattatatcttggcttgatgatcatagcagcacaaaaaacaaagtttaagcattttgttaatttgtaatatttgttacaaaactagtc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31596248 |
cgtgcttgatgatattatatcttggcttgatgatcatagcagcacaaaaaacaaagtttaagcattttgttaatttgtaatatttgttacaaaactagtc |
31596149 |
T |
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| Q |
101 |
atcagcacaaatactttagtgtttgtatgtattcatgttctatctcatgagaactagtcaaatttttactttaatgtttaatgcttgaaaacaaccgaca |
200 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31596148 |
attagcacaaatactttagtgtttgtatgtattcatgttctatctcatgagaactagtcaaatttttactttaatgtttaatgcttgaaaacaaccgaca |
31596049 |
T |
|
| Q |
201 |
tgtatttggttggatgtatctacttattgcaaataatattcttcg |
245 |
Q |
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|||||||||||||||||||||| ||||||||||||||||| |||| |
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| T |
31596048 |
tgtatttggttggatgtatctatttattgcaaataatattgttcg |
31596004 |
T |
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