View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_low_208 (Length: 251)
Name: NF0846_low_208
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_low_208 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 16 - 251
Target Start/End: Complemental strand, 30468480 - 30468247
Alignment:
| Q |
16 |
attcacactaatatatataataccaaaacttataagcgcatatatgcttatccattaaaaggtaaagagactaaaataaagaatgaaagagagattaaaa |
115 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |
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| T |
30468480 |
attcacactaatatata--ataccaaaacttataagcgcatatatgcttatccattaaaaggtaaagaaactaaaataaagaatgaaagagagattagaa |
30468383 |
T |
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| Q |
116 |
aggactagatcctctatggatgcaatataatattacatgcttagattcactcgaaatctaacaccctctacaactacaacatcatactgcaactgcagat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||| |
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| T |
30468382 |
aggactagatcctctatggatgcaatataatattacatgcgtagattcattcgaaatctaacaccccctacaactgcaacatcatactgcaactgcagat |
30468283 |
T |
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| Q |
216 |
gatctaatatttgatcaaaaagtaacaacttatagc |
251 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
30468282 |
gatctaatatttgatcaaaaagtaacaacttatagc |
30468247 |
T |
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