View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0846_low_214 (Length: 250)
Name: NF0846_low_214
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0846_low_214 |
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Alignment Details
Target: chr3 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 91 - 242
Target Start/End: Complemental strand, 23616933 - 23616782
Alignment:
| Q |
91 |
tatgttgacctcccaccttatgcacccacacagcctaaggccaaaagaaagagaacttcactaagacttctttccacttggaatttagttttnnnnnnnn |
190 |
Q |
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| T |
23616933 |
tatgttgacctcccaccttatgcacccacacagcctaaggccaaaagaaagagaacttcactaagacatctttccacttggaattgagtttaaaaaaaaa |
23616834 |
T |
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| Q |
191 |
nncctaaaagaattttcaaaaacaagtaagtaaattccttttccttcatctc |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23616833 |
aacctaaaagaattttcaaaaacaagtaagtaaattccttttccttcatctc |
23616782 |
T |
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