View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0846_low_4 (Length: 759)

Name: NF0846_low_4
Description: NF0846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0846_low_4
NF0846_low_4
[»] chr5 (41 HSPs)
chr5 (442-680)||(18886221-18886456)
chr5 (9-92)||(18891358-18891441)
chr5 (133-211)||(40445976-40446054)
chr5 (132-203)||(5846021-5846092)
chr5 (140-211)||(5974216-5974286)
chr5 (133-203)||(6489000-6489070)
chr5 (134-183)||(11720888-11720937)
chr5 (134-211)||(15889405-15889482)
chr5 (132-204)||(10515353-10515425)
chr5 (133-193)||(27721683-27721743)
chr5 (140-211)||(11647197-11647268)
chr5 (132-183)||(40056608-40056659)
chr5 (140-210)||(19647499-19647569)
chr5 (132-180)||(689539-689587)
chr5 (145-193)||(781868-781916)
chr5 (131-211)||(1669570-1669650)
chr5 (134-210)||(32200438-32200514)
chr5 (132-204)||(38495134-38495206)
chr5 (134-193)||(5485180-5485239)
chr5 (140-183)||(8545007-8545050)
chr5 (140-211)||(13796330-13796401)
chr5 (132-211)||(19248471-19248550)
chr5 (140-211)||(20114705-20114776)
chr5 (140-191)||(22498942-22498993)
chr5 (140-183)||(33654748-33654791)
chr5 (150-193)||(42168953-42168996)
chr5 (140-198)||(3389162-3389220)
chr5 (140-198)||(5614765-5614823)
chr5 (129-211)||(10199008-10199090)
chr5 (134-180)||(16188818-16188864)
chr5 (134-180)||(16188920-16188966)
chr5 (134-180)||(29695009-29695055)
chr5 (133-183)||(34436844-34436894)
chr5 (134-203)||(3445245-3445314)
chr5 (138-183)||(16076429-16076474)
chr5 (134-211)||(18589858-18589934)
chr5 (140-193)||(23118059-23118112)
chr5 (140-193)||(26376966-26377019)
chr5 (132-193)||(37932322-37932383)
chr5 (134-203)||(40715947-40716016)
chr5 (146-183)||(41630130-41630167)
[»] chr6 (30 HSPs)
chr6 (567-670)||(15831360-15831463)
chr6 (567-657)||(15818292-15818382)
chr6 (602-686)||(30372125-30372206)
chr6 (140-203)||(29069483-29069546)
chr6 (133-187)||(3358384-3358438)
chr6 (134-211)||(2726407-2726484)
chr6 (150-211)||(12232172-12232233)
chr6 (135-204)||(20744133-20744202)
chr6 (134-211)||(27834333-27834410)
chr6 (133-193)||(8834923-8834983)
chr6 (134-178)||(19277568-19277612)
chr6 (133-193)||(28231433-28231493)
chr6 (140-183)||(3373399-3373442)
chr6 (140-183)||(6610077-6610120)
chr6 (140-211)||(17935729-17935800)
chr6 (140-187)||(32524434-32524481)
chr6 (157-211)||(5604607-5604661)
chr6 (132-198)||(8138461-8138527)
chr6 (132-198)||(12735246-12735312)
chr6 (134-204)||(13496110-13496180)
chr6 (140-210)||(14169536-14169606)
chr6 (150-204)||(14918297-14918351)
chr6 (140-198)||(33824881-33824939)
chr6 (134-183)||(331904-331953)
chr6 (154-211)||(16204780-16204837)
chr6 (134-183)||(18256877-18256926)
chr6 (132-173)||(18313925-18313966)
chr6 (145-190)||(21941470-21941515)
chr6 (145-198)||(24212542-24212595)
chr6 (637-670)||(30376507-30376540)
[»] scaffold0643 (1 HSPs)
scaffold0643 (601-672)||(5183-5254)
[»] chr7 (36 HSPs)
chr7 (132-211)||(5579685-5579764)
chr7 (132-210)||(8901363-8901441)
chr7 (135-211)||(30793036-30793112)
chr7 (138-193)||(43998573-43998628)
chr7 (139-193)||(6384850-6384904)
chr7 (133-211)||(35142139-35142217)
chr7 (145-211)||(40187626-40187692)
chr7 (133-183)||(42829252-42829302)
chr7 (132-198)||(43539107-43539173)
chr7 (133-198)||(5041332-5041397)
chr7 (140-193)||(7872756-7872809)
chr7 (138-183)||(33781499-33781544)
chr7 (134-199)||(37230030-37230095)
chr7 (133-209)||(19599138-19599214)
chr7 (135-187)||(43579067-43579119)
chr7 (140-191)||(2916102-2916153)
chr7 (140-183)||(27263341-27263384)
chr7 (140-183)||(27270235-27270278)
chr7 (151-198)||(35222935-35222982)
chr7 (145-211)||(44434033-44434100)
chr7 (132-211)||(46849097-46849176)
chr7 (133-211)||(10025987-10026065)
chr7 (141-183)||(10362322-10362364)
chr7 (137-183)||(22991409-22991455)
chr7 (133-203)||(31038520-31038590)
chr7 (146-183)||(1285087-1285124)
chr7 (134-183)||(3830062-3830111)
chr7 (146-183)||(3948060-3948097)
chr7 (133-211)||(14671161-14671241)
chr7 (133-198)||(19626528-19626593)
chr7 (141-186)||(32855521-32855566)
chr7 (140-201)||(35666303-35666364)
chr7 (133-210)||(42336063-42336140)
chr7 (146-187)||(44106634-44106675)
chr7 (134-183)||(44454506-44454555)
chr7 (132-193)||(47342669-47342730)
[»] chr2 (50 HSPs)
chr2 (134-203)||(24592844-24592913)
chr2 (133-193)||(16204825-16204885)
chr2 (134-193)||(27152347-27152406)
chr2 (133-204)||(27244650-27244721)
chr2 (140-211)||(31815877-31815948)
chr2 (145-211)||(9547399-9547465)
chr2 (133-201)||(25603911-25603979)
chr2 (134-193)||(833077-833136)
chr2 (134-193)||(2256965-2257024)
chr2 (146-209)||(3904208-3904271)
chr2 (140-191)||(7302151-7302202)
chr2 (133-200)||(22571866-22571933)
chr2 (133-180)||(28644518-28644565)
chr2 (132-203)||(41763876-41763947)
chr2 (145-211)||(7350551-7350617)
chr2 (140-202)||(31835491-31835553)
chr2 (133-183)||(44694681-44694731)
chr2 (134-187)||(38835254-38835307)
chr2 (134-198)||(30089043-30089107)
chr2 (134-198)||(30125647-30125711)
chr2 (145-193)||(41526784-41526832)
chr2 (135-203)||(41859847-41859915)
chr2 (132-203)||(4122011-4122082)
chr2 (145-204)||(5168576-5168635)
chr2 (140-211)||(17142830-17142901)
chr2 (140-211)||(20565065-20565136)
chr2 (140-183)||(40967389-40967432)
chr2 (132-183)||(45032685-45032736)
chr2 (133-183)||(4897536-4897586)
chr2 (133-183)||(4944930-4944980)
chr2 (132-198)||(8091161-8091227)
chr2 (137-203)||(20120719-20120785)
chr2 (137-211)||(23250310-23250384)
chr2 (132-198)||(26999102-26999168)
chr2 (134-204)||(29734685-29734755)
chr2 (133-211)||(29896284-29896362)
chr2 (133-183)||(33063979-33064029)
chr2 (145-203)||(34191306-34191364)
chr2 (133-211)||(36264469-36264547)
chr2 (145-199)||(36474767-36474821)
chr2 (133-191)||(44868412-44868470)
chr2 (146-183)||(7537116-7537153)
chr2 (134-183)||(13196694-13196743)
chr2 (142-183)||(22359007-22359048)
chr2 (134-203)||(29544621-29544690)
chr2 (134-183)||(34977198-34977247)
chr2 (135-188)||(36615046-36615099)
chr2 (134-211)||(37670471-37670548)
chr2 (150-191)||(39761448-39761489)
chr2 (138-211)||(44110948-44111021)
[»] chr1 (41 HSPs)
chr1 (133-198)||(16033453-16033518)
chr1 (132-211)||(28832161-28832240)
chr1 (134-211)||(33153870-33153947)
chr1 (134-198)||(26803454-26803518)
chr1 (134-193)||(12213987-12214046)
chr1 (132-211)||(32944728-32944807)
chr1 (132-211)||(36467015-36467094)
chr1 (133-204)||(52267757-52267828)
chr1 (132-189)||(5864147-5864205)
chr1 (133-183)||(17669638-17669688)
chr1 (132-193)||(18091195-18091257)
chr1 (133-183)||(32075262-32075312)
chr1 (134-211)||(17139507-17139584)
chr1 (133-190)||(41142697-41142754)
chr1 (137-210)||(46334772-46334845)
chr1 (140-180)||(10292936-10292976)
chr1 (135-183)||(40922735-40922783)
chr1 (145-193)||(42841144-42841192)
chr1 (140-183)||(2889944-2889987)
chr1 (134-173)||(17058702-17058741)
chr1 (134-193)||(21400031-21400090)
chr1 (134-201)||(25086477-25086544)
chr1 (138-189)||(28039872-28039923)
chr1 (132-183)||(29935975-29936026)
chr1 (133-180)||(30678834-30678881)
chr1 (132-183)||(31061921-31061972)
chr1 (134-211)||(10356705-10356782)
chr1 (137-179)||(10841897-10841939)
chr1 (133-183)||(13054866-13054916)
chr1 (133-183)||(18462114-18462164)
chr1 (145-211)||(39949817-39949883)
chr1 (133-203)||(42045370-42045440)
chr1 (145-186)||(1408440-1408481)
chr1 (134-179)||(2884470-2884515)
chr1 (140-193)||(6809807-6809860)
chr1 (146-183)||(7574136-7574173)
chr1 (138-191)||(9265846-9265899)
chr1 (140-193)||(10132452-10132505)
chr1 (134-211)||(27533237-27533314)
chr1 (145-198)||(32497484-32497537)
chr1 (131-180)||(41573290-41573339)
[»] scaffold0016 (1 HSPs)
scaffold0016 (134-198)||(99031-99095)
[»] chr8 (30 HSPs)
chr8 (132-211)||(7996932-7997011)
chr8 (133-198)||(39821877-39821942)
chr8 (28-76)||(5586116-5586164)
chr8 (131-211)||(29376892-29376972)
chr8 (133-179)||(8837913-8837959)
chr8 (140-189)||(13272534-13272583)
chr8 (145-198)||(29546898-29546951)
chr8 (137-209)||(24195246-24195318)
chr8 (133-193)||(30623286-30623346)
chr8 (134-190)||(32223890-32223946)
chr8 (134-193)||(2554220-2554279)
chr8 (132-183)||(7553671-7553722)
chr8 (140-183)||(15079170-15079213)
chr8 (133-204)||(18638093-18638164)
chr8 (140-211)||(26773792-26773863)
chr8 (133-183)||(56822-56872)
chr8 (140-190)||(6038286-6038336)
chr8 (133-183)||(6394775-6394825)
chr8 (132-190)||(24023823-24023881)
chr8 (140-193)||(1244713-1244766)
chr8 (140-201)||(4263815-4263876)
chr8 (134-183)||(11708980-11709029)
chr8 (146-183)||(13105100-13105137)
chr8 (134-183)||(13357459-13357508)
chr8 (134-211)||(19163526-19163603)
chr8 (152-193)||(22948089-22948130)
chr8 (138-183)||(23159439-23159484)
chr8 (134-183)||(27718912-27718961)
chr8 (133-198)||(33373755-33373820)
chr8 (133-182)||(42200681-42200730)
[»] chr3 (46 HSPs)
chr3 (132-203)||(25441498-25441569)
chr3 (132-203)||(53996291-53996362)
chr3 (146-204)||(1111838-1111896)
chr3 (134-211)||(7464481-7464558)
chr3 (146-191)||(12976612-12976657)
chr3 (134-203)||(38130957-38131026)
chr3 (28-76)||(22733388-22733436)
chr3 (130-210)||(34899087-34899167)
chr3 (146-198)||(42401438-42401490)
chr3 (140-179)||(7651186-7651225)
chr3 (140-211)||(47039427-47039498)
chr3 (133-191)||(1757679-1757737)
chr3 (140-198)||(2078240-2078298)
chr3 (133-183)||(4216417-4216467)
chr3 (132-193)||(7738661-7738722)
chr3 (146-203)||(35126267-35126324)
chr3 (150-203)||(37920996-37921049)
chr3 (145-198)||(49975808-49975861)
chr3 (140-204)||(2186424-2186488)
chr3 (140-204)||(10922305-10922369)
chr3 (140-211)||(24145398-24145467)
chr3 (141-189)||(45096027-45096075)
chr3 (134-198)||(45431942-45432006)
chr3 (140-179)||(3613219-3613258)
chr3 (132-191)||(5186825-5186884)
chr3 (132-211)||(7827500-7827579)
chr3 (146-193)||(13829085-13829132)
chr3 (132-183)||(19468443-19468494)
chr3 (136-183)||(25016348-25016395)
chr3 (132-211)||(29687074-29687153)
chr3 (145-191)||(3176983-3177029)
chr3 (140-190)||(8942017-8942067)
chr3 (37-71)||(17152714-17152748)
chr3 (140-202)||(17588362-17588424)
chr3 (140-198)||(21160052-21160110)
chr3 (132-170)||(22762394-22762432)
chr3 (133-179)||(32753821-32753867)
chr3 (145-211)||(33404233-33404299)
chr3 (135-173)||(48263993-48264031)
chr3 (133-211)||(51250223-51250301)
chr3 (132-189)||(7829888-7829945)
chr3 (133-198)||(8127456-8127521)
chr3 (134-183)||(18870743-18870792)
chr3 (162-211)||(25727957-25728006)
chr3 (134-211)||(28244094-28244171)
chr3 (134-183)||(38387966-38388015)
[»] chr4 (52 HSPs)
chr4 (145-211)||(21318243-21318309)
chr4 (132-183)||(8494979-8495030)
chr4 (133-188)||(15170112-15170167)
chr4 (132-183)||(24063226-24063277)
chr4 (132-210)||(19479468-19479546)
chr4 (142-204)||(36489385-36489447)
chr4 (133-183)||(39489599-39489649)
chr4 (133-183)||(51436624-51436674)
chr4 (129-198)||(7230269-7230338)
chr4 (134-183)||(12712036-12712085)
chr4 (140-193)||(18635530-18635583)
chr4 (134-211)||(20799384-20799461)
chr4 (134-203)||(43034340-43034409)
chr4 (146-211)||(54162705-54162770)
chr4 (141-193)||(11144673-11144725)
chr4 (131-211)||(29908047-29908127)
chr4 (139-183)||(42756124-42756168)
chr4 (140-208)||(48226491-48226559)
chr4 (132-183)||(13276121-13276172)
chr4 (140-203)||(16431616-16431679)
chr4 (140-211)||(23619101-23619172)
chr4 (132-191)||(27655723-27655782)
chr4 (140-203)||(38374957-38375020)
chr4 (133-184)||(40847084-40847135)
chr4 (130-193)||(42845015-42845078)
chr4 (148-211)||(48067141-48067204)
chr4 (132-198)||(6087739-6087805)
chr4 (145-211)||(11949753-11949819)
chr4 (141-183)||(12439665-12439707)
chr4 (133-183)||(16743302-16743352)
chr4 (132-198)||(17423180-17423246)
chr4 (132-186)||(19332316-19332370)
chr4 (134-180)||(30135134-30135180)
chr4 (133-183)||(36203229-36203279)
chr4 (139-173)||(37209040-37209074)
chr4 (133-183)||(47007320-47007370)
chr4 (133-183)||(50362157-50362207)
chr4 (133-191)||(52270040-52270098)
chr4 (140-193)||(7371556-7371609)
chr4 (134-211)||(9946421-9946498)
chr4 (140-193)||(12698597-12698650)
chr4 (133-190)||(20096281-20096338)
chr4 (140-189)||(21623431-21623480)
chr4 (133-210)||(22630351-22630428)
chr4 (134-183)||(23225859-23225908)
chr4 (146-183)||(24540849-24540886)
chr4 (134-211)||(32180824-32180901)
chr4 (135-180)||(39842033-39842078)
chr4 (145-186)||(44909829-44909870)
chr4 (141-186)||(46409496-46409541)
chr4 (130-183)||(48171871-48171924)
chr4 (137-198)||(49953406-49953467)
[»] scaffold0050 (1 HSPs)
scaffold0050 (135-211)||(53370-53446)
[»] scaffold0021 (1 HSPs)
scaffold0021 (133-211)||(161134-161212)
[»] scaffold0038 (1 HSPs)
scaffold0038 (133-193)||(31930-31990)
[»] scaffold0350 (1 HSPs)
scaffold0350 (140-190)||(1248-1298)
[»] scaffold0204 (1 HSPs)
scaffold0204 (132-186)||(16143-16197)
[»] scaffold0008 (1 HSPs)
scaffold0008 (133-183)||(119562-119612)
[»] scaffold0003 (1 HSPs)
scaffold0003 (40-74)||(223629-223663)
[»] scaffold0044 (1 HSPs)
scaffold0044 (137-198)||(42337-42398)
[»] scaffold0007 (1 HSPs)
scaffold0007 (150-211)||(221003-221064)


Alignment Details
Target: chr5 (Bit Score: 209; Significance: 1e-114; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 442 - 680
Target Start/End: Complemental strand, 18886456 - 18886221
Alignment:
Q  442 gtttctttaacatatggcgtgtaaatgttcatcttaagagtttgattttaaatttagtagtatttaatatcatattgtgtatataatgcataagtgagat 541  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||| ||||||||||||||||||    
T  18886456 gtttctttaacatatggcgtgtaaatgttcatcttaagagtttgattttaaatttagta---tttaatatcatattgtgtacataatgcataagtgagat 18886360  T
Q  542 tagaatccccataataatagcaatagtactaatgagagaaagaactataaacagatttcttgctaatatttccacaaacaatgcaatattgcaaattgtt 641  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18886359 tagaatccccataataatagcaatagtactaatgagagaaagaactattaacaaatttcttgctaatatttccacaaacaatgcaatattgcaaattgtt 18886260  T
Q  642 ttaatattaatattattttctcaagtcacgttttcttgg 680  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  18886259 ttaatattaatattattttctcaagtcacgtattcttgg 18886221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 18891441 - 18891358
Alignment:
Q  9 agcacagacattgacccaacttttaccccctatcaataaagtgtcatcagcaaactgaagatgggaaatagccaccagattaga 92  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  18891441 agcacaaacattgacccaacttttaccccctatcaataaagtgtcatcaacaaactgaagatgagaaatagccaccagattaga 18891358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 40445976 - 40446054
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||| ||||  ||||||||||||||| |||||||||||| ||||||||| ||||| ||| |||||| ||||||||||    
T  40445976 tgtcctcgtgagtttaactcagttgataaggacaatgcataatatatgcaaggtctgaggttcaaatctcgatcaccac 40446054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 5846021 - 5846092
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||||||| | |||||| |||||||| || |||||||||||| ||||||||||||||||||| |||| ||||    
T  5846021 ttgtccttataaacttagctcagttggtaaggacaatgcataatatatgcaaagtctggggttcaaaccccg 5846092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 5974286 - 5974216
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||||||| |||||||| |||||||| ||||||||| ||||| ||| ||||| |||||||||||    
T  5974286 gtgaacttaactcagtcgatagggataatgcataatatatgcaaggtctgaggttcaaat-ccgatcaccac 5974216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 6489000 - 6489070
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||||| |||| |||| |||||||| ||||||||||||||| ||||||||| ||||||||| |||| ||||    
T  6489000 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccg 6489070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 11720888 - 11720937
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  11720888 gtccttgtgagcttaactcagttggtagggacaatgcataatatatgcaa 11720937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 15889405 - 15889482
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| |||| |||||||| ||||||||||||||| ||||||||| |||| |||| |||| ||||| ||||||    
T  15889405 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 15889482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 10515353 - 10515425
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    |||||||||||| ||||||| |||||||| |||||||| ||| ||||||||| | ||||||| ||||| ||||    
T  10515353 ttgtccttgtgagcttaacttagttgatatggacaatgaataatatatgcaaggcctggggtacaaattccga 10515425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 27721743 - 27721683
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||| |||| |||| |||||||| |||| |||||||||| |||||||||||||||||||    
T  27721743 tgtcctcgtgagcttagctcagttggtaggaacaatgcataatatatgcaaagtctggggt 27721683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 11647197 - 11647268
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||||||||| || |||||||||||| ||||||||| || |||||| | ||||| || ||||||    
T  11647197 gtgaacttaactcagttggtaaggacaatgcataatatatgcaaggtttggggttcgaatcctgaccaccac 11647268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 40056659 - 40056608
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||| ||||||||||||| || |||||||||||| |||||||||    
T  40056659 ttgtccttgtgagcttaactcagttggtaaggacaatgcataatatatgcaa 40056608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 19647569 - 19647499
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacca 210  Q
    ||||||||||||| | || ||||||||||| ||| |||||| || ||||||||| |||||||||| |||||    
T  19647569 gtgaacttaactcggatggtagggacaatgtataatatatgtaaggtctggggttcaaatcccgaccacca 19647499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 180
Target Start/End: Original strand, 689539 - 689587
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatg 180  Q
    ||||||| ||||||||||||||||||||| |||||||| ||| ||||||    
T  689539 ttgtcctcgtgaacttaactcagttgatatggacaatgtataatatatg 689587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 781868 - 781916
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||||||||||||||||||||| |||  |||||||| |||||||||    
T  781868 cttaactcagttgatagggacaatgtataaaatatgcaaggtctggggt 781916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 1669650 - 1669570
Alignment:
Q  131 gttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||  ||||||||| |||||||| || | |||||||||| |||||||||||||| |||| |||  |||| |||||||    
T  1669650 gttgtccccgtgaacttagctcagttggtaagaacaatgcataatatatgcaaagtctagggttcaatccccggtcaccac 1669570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 32200514 - 32200438
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacca 210  Q
    ||||| |||| |||| ||||||||| |||||||||||||| ||||||||| ||| ||||| |||  ||||| |||||    
T  32200514 gtcctcgtgagcttagctcagttgacagggacaatgcataatatatgcaaggtccggggttcaagccccgaccacca 32200438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 38495134 - 38495206
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    |||||||||||||||||||||||||| || ||| ||||||||  |||||||| ||  ||||| |||| |||||    
T  38495134 ttgtccttgtgaacttaactcagttggtatggataatgcataaaatatgcaaggttcggggttcaaaccccga 38495206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 5485180 - 5485239
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||| |||| |||| |||||||| ||||||||||||||| ||||||||| ||| |||||    
T  5485180 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaatgtccggggt 5485239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 8545050 - 8545007
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||| |||||||||||||||| |||||||||||| |||||||||    
T  8545050 gtgagcttaactcagttgataaggacaatgcataatatatgcaa 8545007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 13796330 - 13796401
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| ||||||||||| |||| | |||||||||| ||||||||| ||||||||| ||||  |||| ||||||    
T  13796330 gtgagcttaactcagtcgatatgaacaatgcataatatatgcaaggtctggggtacaaactccgaccaccac 13796401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 19248471 - 19248550
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||| |||| |||| |||||||| ||  ||||||||||| ||||||||| || |||||| ||||||| | |||||||    
T  19248471 ttgtcctcgtgagcttagctcagttggtatagacaatgcataatatatgcaatgtttggggttcaaatcctggtcaccac 19248550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 20114705 - 20114776
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||| |||||||| || ||||||||||||  |||| |||||| || ||| |||||||||| ||||||    
T  20114705 gtgaacttagctcagttggtaaggacaatgcataaaatatacaaagtttgaggttcaaatcccgaccaccac 20114776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 22498942 - 22498993
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    |||| ||||||||||||| || |||||||||||| ||||||||| |||||||    
T  22498942 gtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtctggg 22498993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 33654748 - 33654791
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||    
T  33654748 gtgagcttaactcagttggtagggacaatgcataatatatgcaa 33654791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 193
Target Start/End: Complemental strand, 42168996 - 42168953
Alignment:
Q  150 ctcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||||| || |||||||||||||||||||||| |||||||||    
T  42168996 ctcagttggtaaggacaatgcatagtatatgcaaggtctggggt 42168953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 3389162 - 3389220
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||| ||||||||||| || |||||||||||| |||||||||  |||||||| ||||    
T  3389162 gtgaacataactcagttggtatggacaatgcataatatatgcaagatctggggttcaaa 3389220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 5614765 - 5614823
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||||||||||||||||||| ||| |||||||| |||||| || ||| ||||| ||||    
T  5614765 gtgaacttaactcagttgatatggataatgcataatatatgtaaggtcgggggttcaaa 5614823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 10199008 - 10199090
Alignment:
Q  129 atgttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||| |||| |||| |||||||| || |||||||||||| |||||  || || |||||| | |||||||| ||||||    
T  10199008 atgttgtcctcgtgagcttagctcagttggtatggacaatgcataatatatataaggtgtggggttcgaatcccgaccaccac 10199090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 16188818 - 16188864
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatg 180  Q
    ||||||||||||||| |||||||| || |||||||||||| ||||||    
T  16188818 gtccttgtgaacttagctcagttggtatggacaatgcataatatatg 16188864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 16188920 - 16188966
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatg 180  Q
    ||||||||||||||| |||||||| || |||||||||||| ||||||    
T  16188920 gtccttgtgaacttagctcagttggtatggacaatgcataatatatg 16188966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 29695009 - 29695055
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatg 180  Q
    ||||| |||| |||||||||||||||| |||||||||||| ||||||    
T  29695009 gtcctcgtgaccttaactcagttgatatggacaatgcataatatatg 29695055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 34436844 - 34436894
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| |||| |||| |||||||| ||||||||||||||| |||||||||    
T  34436844 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 34436894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 3445314 - 3445245
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||| |||| |||| |||||||| || |||||||||||| | ||||||| ||| ||||| |||||||||    
T  3445314 gtcctcgtgagcttagctcagttggtaaggacaatgcataatgtatgcaaggtccggggttcaaatcccg 3445245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 16076429 - 16076474
Alignment:
Q  138 ttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| |||||||||| ||||| |||||||||||| |||||||||    
T  16076429 ttgtgagcttaactcagctgatatggacaatgcataatatatgcaa 16076474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 18589934 - 18589858
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| ||||||||||||| || | |||||||||| ||||||||| ||| |||||  ||| ||||||||||||    
T  18589934 gtcctcgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtccggggtttaaa-cccgatcaccac 18589858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 23118112 - 23118059
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||| |||||||||||||||| |||||||||||| |||||| || || ||||||    
T  23118112 gtgagcttaactcagttgataaggacaatgcataatatatgtaaggtttggggt 23118059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 26376966 - 26377019
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||||| |||||||| || |||||||||||| ||||||||| ||| |||||    
T  26376966 gtgaacttagctcagttggtaaggacaatgcatattatatgcaacgtccggggt 26377019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 37932322 - 37932383
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||| |||| |||| |||||||| || |||||||||||| ||||||||| ||| |||||    
T  37932322 ttgtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtccggggt 37932383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 40716016 - 40715947
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||| |||| |||| |||| |||||| |||||||||||| ||||||||| ||| ||||| |||| ||||    
T  40716016 gtcctcgtgagcttagctcaattgatatggacaatgcataatatatgcaaggtccggggttcaaaccccg 40715947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 183
Target Start/End: Complemental strand, 41630167 - 41630130
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  41630167 ttaactcaattgatagggacaatgcataatatatgcaa 41630130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 3e-25; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 567 - 670
Target Start/End: Original strand, 15831360 - 15831463
Alignment:
Q  567 gtactaatgagagaaagaactataaacagatttcttgctaatatttccacaaacaatgcaatattgcaaattgttttaatattaatattattttctcaag 666  Q
    |||| ||||||||||| |||| | |||  | || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||    
T  15831360 gtaccaatgagagaaaaaactgttaaccaagttattgctaatatttcaacaaacaatgcaatattgcaaattgttttaatattaatattatttggtcaag 15831459  T
Q  667 tcac 670  Q
    ||||    
T  15831460 tcac 15831463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 567 - 657
Target Start/End: Original strand, 15818292 - 15818382
Alignment:
Q  567 gtactaatgagagaaagaactataaacagatttcttgctaatatttccacaaacaatgcaatattgcaaattgttttaatattaatattat 657  Q
    |||| |||||||||||||||| | |||  | || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15818292 gtaccaatgagagaaagaactgttaaccaagttattgctaatatttcaacaaacaatgcaatattgcaaattgttttaatattaatattat 15818382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 602 - 686
Target Start/End: Complemental strand, 30372206 - 30372125
Alignment:
Q  602 tgctaatatttccacaaacaatgcaatattgcaaattgttttaatattaatattattttctcaagtcacgttttcttgggattgg 686  Q
    |||||||||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||||| | | |||||||||    
T  30372206 tgctaatatttccacaaacattgcaat---gcaaattgttttaatattaatattgttttctcaagtcacgtatgcatgggattgg 30372125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 29069483 - 29069546
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||| |||| |||||||||||||||||||||||| |||||| |||||||| ||| |||| ||||    
T  29069483 gtgagcttagctcagttgatagggacaatgcataatatatgaaaagtctgaggttcaaaccccg 29069546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 187
Target Start/End: Original strand, 3358384 - 3358438
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtc 187  Q
    |||||| |||||||||||||||||| |  |||||||||||| |||||||||||||    
T  3358384 tgtcctcgtgaacttaactcagttggtttggacaatgcataatatatgcaaagtc 3358438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 2726484 - 2726407
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| || ||||||||||||||| || |||||||||||| ||||||||| ||| ||||| | || |||| |||||||    
T  2726484 gtcctcgtaaacttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcgaaccccggtcaccac 2726407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 12232233 - 12232172
Alignment:
Q  150 ctcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||||||||||||||| ||||||||  ||||||||| | || ||||| ||||||    
T  12232233 ctcagttgatagggacaatgcataatatatgcagtgtctggggttcgaaccccgaccaccac 12232172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 20744133 - 20744202
Alignment:
Q  135 tccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    |||| |||| |||| |||||||| || |||||||||||| ||||||||| ||||||||| |||| |||||    
T  20744133 tcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccccga 20744202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 27834333 - 27834410
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| ||||||||||| | ||||||||| ||||| ||||||||| ||||||||| |||| || || ||||||    
T  27834333 gtcctcgtgagcttaactcagtgggtagggacaaggcataatatatgcaaggtctggggttcaaacccggaccaccac 27834410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 8834923 - 8834983
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||| |||| |||||||||||||||| ||| |||||||| | ||||||||||| |||||    
T  8834923 tgtcctcgtgagcttaactcagttgataaggataatgcataatgtatgcaaagtccggggt 8834983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 19277568 - 19277612
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtata 178  Q
    ||||| ||||||||||||||||||||||| |||||||||| ||||    
T  19277568 gtcctcgtgaacttaactcagttgataggaacaatgcataatata 19277612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 28231493 - 28231433
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||| |||| |||  |||||||||||||||||||||||| ||||||||| ||| |||||    
T  28231493 tgtcctagtgagcttggctcagttgatagggacaatgcataatatatgcaaggtccggggt 28231433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 3373442 - 3373399
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| ||||||||||||||| |||||||||||| |||||||||    
T  3373442 gtgaatttaactcagttgatatggacaatgcataatatatgcaa 3373399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 6610077 - 6610120
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||||||||||||||||| || ||||||||| |||||||||    
T  6610077 gtgaacttaactcagttgataagggcaatgcataatatatgcaa 6610120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 17935729 - 17935800
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||| |||||||| |  ||||||||||||  |||||||| |||| |||| |||||||||| ||||||    
T  17935729 gtgaacttagctcagttggtttggacaatgcataaaatatgcaaggtctagggttcaaatcccgaccaccac 17935800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 32524481 - 32524434
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtc 187  Q
    |||| ||||||||| ||| ||||||||||||||| |||||||||||||    
T  32524481 gtgagcttaactcaattggtagggacaatgcataatatatgcaaagtc 32524434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 5604661 - 5604607
Alignment:
Q  157 gatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||||||| ||| |||||||| |||||| ||| |||||||||| ||||||    
T  5604661 gatagggacaatgtataatatatgcatagtctgaggttcaaatcccgaccaccac 5604607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 8138527 - 8138461
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||||| ||||| ||| ||||||||||| | |||||||||| |||||| || ||||||||| ||||    
T  8138527 ttgtcctcgtgaatttagctcagttgataagaacaatgcataatatatgtaaggtctggggttcaaa 8138461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 12735312 - 12735246
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||||| |||| ||||||||||||| | |||||||||||||  |||||||| || |||||| ||||    
T  12735312 ttgtcctcgtgagcttaactcagttggttgggacaatgcataaaatatgcaaggtttggggttcaaa 12735246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 13496110 - 13496180
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    ||||| |||| |||||||||||||||| | |||||||||| ||||||||| ||| || || |||| |||||    
T  13496110 gtcctcgtgagcttaactcagttgatatgaacaatgcataatatatgcaaggtccggagttcaaaccccga 13496180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 210
Target Start/End: Complemental strand, 14169606 - 14169536
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacca 210  Q
    |||| |||||||||||||||| |||||||||| | |||||||||  | |||||| |||| | |||||||||    
T  14169606 gtgaccttaactcagttgataaggacaatgcagaatatatgcaagatttggggttcaaacctcgatcacca 14169536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 14918351 - 14918297
Alignment:
Q  150 ctcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    |||||||| ||||||||||||||| ||||| ||| ||||||||| |||| |||||    
T  14918351 ctcagttggtagggacaatgcataatatatacaaggtctggggttcaaaccccga 14918297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 33824881 - 33824939
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||| |||| ||||||||||| |||||||||||| ||||||||| ||| ||||| ||||    
T  33824881 gtgatcttagctcagttgataaggacaatgcataatatatgcaaggtccggggttcaaa 33824939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 331953 - 331904
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||| ||||||||||||| ||| ||||||||||| |||||||||    
T  331953 gtcctcgtgagcttaactcagttggtagagacaatgcataatatatgcaa 331904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 16204837 - 16204780
Alignment:
Q  154 gttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||| |||||||||||| | ||||||| ||| ||||| |||||||||| ||||||    
T  16204837 gttgatatggacaatgcataatgtatgcaaggtccggggttcaaatcccgaccaccac 16204780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 18256877 - 18256926
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||| |||| ||||||||||| |||||||||||| |||||||||    
T  18256877 gtcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaa 18256926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 18313925 - 18313966
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcata 173  Q
    ||||||| |||| |||||||||||||||||| ||||||||||    
T  18313925 ttgtcctcgtgagcttaactcagttgataggaacaatgcata 18313966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 190
Target Start/End: Complemental strand, 21941515 - 21941470
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctgg 190  Q
    |||||||||||||||||||||||||| || |||||| || ||||||    
T  21941515 cttaactcagttgatagggacaatgcgtaatatatgtaaggtctgg 21941470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 24212595 - 24212542
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||||||||||||| |||||||||||| |||||| || || |||||| ||||    
T  24212595 cttaactcagttgatatggacaatgcataatatatgtaatgtatggggttcaaa 24212542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 637 - 670
Target Start/End: Complemental strand, 30376540 - 30376507
Alignment:
Q  637 ttgttttaatattaatattattttctcaagtcac 670  Q
    ||||||||||||||||||||||||||||| ||||    
T  30376540 ttgttttaatattaatattattttctcaaatcac 30376507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0643 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0643
Description:

Target: scaffold0643; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 601 - 672
Target Start/End: Original strand, 5183 - 5254
Alignment:
Q  601 ttgctaatatttccacaaacaatgcaatattgcaaattgttttaatattaatattattttctcaagtcacgt 672  Q
    ||||||||||||| ||||  ||||||||||||||||||||||| |||||||||||||||  |||||| ||||    
T  5183 ttgctaatatttcaacaactaatgcaatattgcaaattgttttcatattaatattatttggtcaagttacgt 5254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 5579685 - 5579764
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||| |||| |||||||| |||||||| |||||| ||||||||| ||||||||| |||| ||||| ||||||    
T  5579685 ttgtccttgtgagcttagctcagttggtagggacagtgcataatatatgcaaggtctggggttcaaaccccgaccaccac 5579764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 8901363 - 8901441
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacca 210  Q
    ||||||| |||||||||||||| |||||| |||||||||||||||||||||   |||||||| | |||||||| |||||    
T  8901363 ttgtcctcgtgaacttaactcaattgatatggacaatgcatagtatatgcaggatctggggttcgaatcccgaccacca 8901441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 30793112 - 30793036
Alignment:
Q  135 tccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||| ||||||||||||| || |||||||||||||||||||||  |||| |||| | |||||||| ||||||    
T  30793112 tccttgtgagcttaactcagttggtatggacaatgcatagtatatgcatggtctagggttcgaatcccgaccaccac 30793036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 43998573 - 43998628
Alignment:
Q  138 ttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||| ||||| |||||||||| |||||||||||||||||||||| || ||||||    
T  43998573 ttgtgagcttaagtcagttgataaggacaatgcatagtatatgcaaggtttggggt 43998628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 193
Target Start/End: Original strand, 6384850 - 6384904
Alignment:
Q  139 tgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||| |||||||||||| ||| |||||||||||| ||||||||| |||||||||    
T  6384850 tgtgagcttaactcagttaataaggacaatgcataatatatgcaaggtctggggt 6384904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 35142217 - 35142139
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||| |||| |||| ||||||||||| |||||||||||| |||||||||||| || ||| | || ||||| ||||||    
T  35142217 tgtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaaagtttgaggttcgaaccccgaccaccac 35142139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 40187692 - 40187626
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||||||| ||||||||||||||| |||||| || ||||| ||| |||| ||||| ||||||    
T  40187692 cttaactcagttggtagggacaatgcataatatatgtaaggtctgcggttcaaaccccgaacaccac 40187626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 42829302 - 42829252
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| |||| ||| ||||||||||||||||||||||||| |||||||||    
T  42829302 tgtcctcgtgagcttgactcagttgatagggacaatgcataatatatgcaa 42829252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 43539173 - 43539107
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||||||||| |||| ||||||||||||| |||||||||| |||||| || ||| ||||| ||||    
T  43539173 ttgtccttgtgagcttagctcagttgataggaacaatgcataatatatgtaaggtccggggttcaaa 43539107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 5041332 - 5041397
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||| |||| ||||||| ||||| || |||||||||||| ||||||||| ||||||||| ||||    
T  5041332 tgtcctcgtgagcttaactgagttggtatggacaatgcataatatatgcaaggtctggggttcaaa 5041397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 7872809 - 7872756
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||||| |||||||| || |||||||||||| ||||||||| |||||||||    
T  7872809 gtgaacttagctcagttggtaaggacaatgcataatatatgcaaggtctggggt 7872756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 33781544 - 33781499
Alignment:
Q  138 ttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||||||||||||||||||||||||||||| | |||||||    
T  33781544 ttgtggacttaactcagttgatagggacaatgcataatttatgcaa 33781499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 37230095 - 37230030
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaat 199  Q
    |||| ||||| ||||||||||||| || ||| |||||||| ||||||||| ||||||||| |||||    
T  37230095 gtccatgtgagcttaactcagttggtaaggaaaatgcataatatatgcaaggtctggggttcaaat 37230030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 19599138 - 19599214
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacc 209  Q
    |||||| ||||  |||||||||||| || |||||||||||| ||||||||| ||| ||||| |||| ||||| ||||    
T  19599138 tgtcctggtgagtttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacc 19599214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 43579119 - 43579067
Alignment:
Q  135 tccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtc 187  Q
    |||| ||||||||| |||||||| ||||||||||||||| || ||||||||||    
T  43579119 tcctggtgaacttagctcagttggtagggacaatgcataatacatgcaaagtc 43579067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 2916102 - 2916153
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    |||| ||||||||||||| || |||||||||||| ||||||||| |||||||    
T  2916102 gtgaccttaactcagttggtacggacaatgcataatatatgcaaggtctggg 2916153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 27263341 - 27263384
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||||||||| || |||||||||||| |||||||||    
T  27263341 gtgaacttaactcagttggtatggacaatgcataatatatgcaa 27263384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Original strand, 27270235 - 27270278
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||||||||| || |||||||||||| |||||||||    
T  27270235 gtgaacttaactcagttggtatggacaatgcataatatatgcaa 27270278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 35222935 - 35222982
Alignment:
Q  151 tcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||||||||||||||||||||  ||||||||| ||||||||| ||||    
T  35222935 tcagttgatagggacaatgcatgatatatgcaaggtctggggttcaaa 35222982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 44434033 - 44434100
Alignment:
Q  145 cttaactcagttgatagggacaatgcat-agtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||| || |||||||||||||| | ||||||||||||| | ||| |||||||||| ||||||    
T  44434033 cttaactcagctggtagggacaatgcataaatatatgcaaagtccgaggttcaaatcccgaccaccac 44434100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 46849176 - 46849097
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||||||||| | | ||| ||| ||||||||||| |||||| ||||| ||| || |||| ||||| ||||||    
T  46849176 ttgtccttgtgaacttaatttaattggtagagacaatgcataatatatgtaaagtttggagttcaaaccccgaccaccac 46849097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 10025987 - 10026065
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||| |||| ||||||||||||| |  ||||||||||||  |||||||| || |||||| |||| ||||| ||||||    
T  10025987 tgtcctcgtgagcttaactcagttggtttggacaatgcataaaatatgcaaggtatggggttcaaaccccgaccaccac 10026065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 10362364 - 10362322
Alignment:
Q  141 tgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||||||||||| ||| |||||||| |||||||||    
T  10362364 tgaacttaactcagttgataaggagaatgcataatatatgcaa 10362322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 22991455 - 22991409
Alignment:
Q  137 cttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||| ||||||||||||| || |||||||||||| |||||||||    
T  22991455 cttgtgagcttaactcagttggtatggacaatgcataatatatgcaa 22991409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 31038590 - 31038520
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||||| |||| |||| |||||||| || |||||||||||| | ||||||| ||||||||| |||| ||||    
T  31038590 tgtcctcgtgagcttagctcagttggtatggacaatgcatattgtatgcaaggtctggggttcaaaccccg 31038520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 183
Target Start/End: Complemental strand, 1285124 - 1285087
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  1285124 ttaactcagttgataggaacaatgcataatatatgcaa 1285087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 3830062 - 3830111
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| ||||||||| |||||||  ||||||||||||||| |||||||||    
T  3830062 gtcctcgtgaacttagctcagtttgtagggacaatgcataatatatgcaa 3830111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 3948060 - 3948097
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  3948060 ttaactcagttgatagagacaatgcataatatatgcaa 3948097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 14671161 - 14671241
Alignment:
Q  133 tgtccttgtgaacttaactcagttg--atagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||| ||||||||| |||||||   ||| |||||||||||| ||||| ||| ||| ||||| | |||||||||||||||    
T  14671161 tgtcctcgtgaacttagctcagttagtataaggacaatgcataatatatacaaggtccggggttcgaatcccgatcaccac 14671241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 19626593 - 19626528
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||| |||| ||||||||||||| |  |||||||||||| ||||||||| ||| ||||| ||||    
T  19626593 tgtcctcgtgagcttaactcagttggtttggacaatgcataatatatgcaaggtccggggttcaaa 19626528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Original strand, 32855521 - 32855566
Alignment:
Q  141 tgaacttaactcagttgatagggacaatgcatagtatatgcaaagt 186  Q
    |||||||||||||||||||| | | |||||||| ||||||||||||    
T  32855521 tgaacttaactcagttgatatgaataatgcataatatatgcaaagt 32855566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 35666303 - 35666364
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcc 201  Q
    |||| |||||||| |||| || |||||||||||| |||||| || ||||||||| |||||||    
T  35666303 gtgagcttaactcggttggtaaggacaatgcataatatatgtaatgtctggggttcaaatcc 35666364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 42336063 - 42336140
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacca 210  Q
    |||||| ||||| ||| ||||||||||| |||||||||||| || |||||| ||| ||||| | |||| ||| |||||    
T  42336063 tgtcctcgtgaatttagctcagttgataaggacaatgcataatacatgcaaggtccggggttcgaatctcgaccacca 42336140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 44106634 - 44106675
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaaagtc 187  Q
    |||||||||||||||| |||||| |||| |||||||||||||    
T  44106634 ttaactcagttgatagagacaatacataatatatgcaaagtc 44106675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 44454506 - 44454555
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||| ||||||||||||| |||||||||||||||  ||||||||    
T  44454506 gtcctcgtgagcttaactcagttggtagggacaatgcataaaatatgcaa 44454555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 47342669 - 47342730
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||| ||||||||| |||||||| || ||||||||||||  |||||||| || ||||||    
T  47342669 ttgtcctcgtgaacttagctcagttggtatggacaatgcataaaatatgcaaggtttggggt 47342730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 24592913 - 24592844
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||||||||| ||||||||| |||| ||||    
T  24592913 gtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaaccccg 24592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 16204885 - 16204825
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||| ||||| |||||||||||||||| |||||||||||| ||||||||| |||||||||    
T  16204885 tgtccctgtgagcttaactcagttgataaggacaatgcataatatatgcaaggtctggggt 16204825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 27152347 - 27152406
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||||||| ||||||||||||| |||||| |||||||| ||||||||| |||||||||    
T  27152347 gtccttgtgagcttaactcagttggtagggataatgcataatatatgcaaggtctggggt 27152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 27244650 - 27244721
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    |||||| |||| |||| |||||||||||||||||||||||| ||||||||| |||| |||| |||| |||||    
T  27244650 tgtcctcgtgagcttagctcagttgatagggacaatgcataatatatgcaaggtctagggttcaaagcccga 27244721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 31815948 - 31815877
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| ||||||||||||| ||||||||||||||| ||||||||| ||| ||||| |||| ||||| ||||||    
T  31815948 gtgagcttaactcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 31815877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 9547465 - 9547399
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||||||| |||||||||||| ||||||||| || |||||| |||| ||||| ||||||    
T  9547465 cttaactcagttgatatggacaatgcataatatatgcaaggtttggggttcaaaccccgaccaccac 9547399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 133 - 201
Target Start/End: Complemental strand, 25603979 - 25603911
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcc 201  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||  || || |||||| |||||||    
T  25603979 tgtccttgtgaaattgactcagttgatagggacaatgcataatatatataaggtttggggttcaaatcc 25603911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 833136 - 833077
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||||||||| | |||||||| || |||||||||||| ||||||||| |||||||||    
T  833136 gtccttgtgaactcagctcagttggtatggacaatgcataatatatgcaaggtctggggt 833077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 2256965 - 2257024
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||| |||| ||||||||||||| || |||||||||||| ||||||||| |||||||||    
T  2256965 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctggggt 2257024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 146 - 209
Target Start/End: Original strand, 3904208 - 3904271
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacc 209  Q
    |||||| ||||||||||||||||||||| |||||| || ||||||||| |||| || |||||||    
T  3904208 ttaacttagttgatagggacaatgcataatatatgtaaggtctggggttcaaaccctgatcacc 3904271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 7302202 - 7302151
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    ||||||||| ||||||||||||||||||||||||  |||||||| |||||||    
T  7302202 gtgaacttagctcagttgatagggacaatgcataaaatatgcaaggtctggg 7302151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 22571933 - 22571866
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatc 200  Q
    |||||| ||||||||| |||||||||||  ||||||||||| ||||||||| ||| ||||| ||||||    
T  22571933 tgtcctcgtgaacttagctcagttgatatagacaatgcataatatatgcaatgtccggggttcaaatc 22571866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 28644518 - 28644565
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatg 180  Q
    ||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  28644518 tgtccttgtgagcttaactcagttggtagggacaatgcataatatatg 28644565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 41763947 - 41763876
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||||| ||||||||| |||||||| || |||||||||||||||||||||  ||| ||||| |||| ||||    
T  41763947 ttgtcctcgtgaacttagctcagttggtatggacaatgcatagtatatgcacggtccggggttcaaaccccg 41763876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 7350551 - 7350617
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| |||||||| || |||||||||||| |||||||||||||| |||| ||||||| || ||||||    
T  7350551 cttagctcagttggtatggacaatgcataatatatgcaaagtctagggttcaaatcctgaccaccac 7350617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 31835491 - 31835553
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatccc 202  Q
    ||||||||| |||||||| || | ||||||||||  |||||||||||||||||| ||||||||    
T  31835491 gtgaacttatctcagttggtaagaacaatgcataacatatgcaaagtctggggttcaaatccc 31835553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 44694681 - 44694731
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| |||||||||||||||||||||  ||||||||||| |||||||||    
T  44694681 tgtcctcgtgaacttaactcagttgatatagacaatgcataatatatgcaa 44694731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 187
Target Start/End: Complemental strand, 38835307 - 38835254
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtc 187  Q
    ||||||||||||||| || ||||| || |||||||||||| |||||||||||||    
T  38835307 gtccttgtgaacttagctaagttggtaaggacaatgcataatatatgcaaagtc 38835254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 30089043 - 30089107
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||||| ||| ||| ||||| ||||    
T  30089043 gtcctcgtgaacttagctcagttggtagggacaatgcataatatatacaaggtccggggttcaaa 30089107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 30125647 - 30125711
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||| ||||||||| |||||||| ||||||||||||||| ||||| ||| ||| ||||| ||||    
T  30125647 gtcctcgtgaacttagctcagttggtagggacaatgcataatatatacaaggtccggggttcaaa 30125711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 41526832 - 41526784
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||| ||||||||| | |||||||||||||||||||||| |||||||||    
T  41526832 cttagctcagttgacatggacaatgcatagtatatgcaaggtctggggt 41526784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 203
Target Start/End: Original strand, 41859847 - 41859915
Alignment:
Q  135 tccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||||||||  |||||||||||| || ||||||||||||  |||||||| ||||||||| |||| ||||    
T  41859847 tccttgtgagtttaactcagttggtatggacaatgcataaaatatgcaaggtctggggttcaaaccccg 41859915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 4122082 - 4122011
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||||| |||| |||| ||||| || || |||||||||||| ||||||||| |||||||||  ||||||||    
T  4122082 ttgtcctcgtgagcttagctcagctggtatggacaatgcataatatatgcaaggtctggggtttaaatcccg 4122011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 204
Target Start/End: Complemental strand, 5168635 - 5168576
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    |||||||||||||||||||| |||||||| ||||||||| ||  ||||| |||| |||||    
T  5168635 cttaactcagttgatagggataatgcataatatatgcaaggttcggggttcaaaccccga 5168576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 17142830 - 17142901
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| |||| |||||||| ||| ||||||| ||| |||||||||||||||| || |||| ||||| ||||||    
T  17142830 gtgagcttagctcagttggtagtgacaatgtataatatatgcaaagtctggagttcaaaccccgaccaccac 17142901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 20565136 - 20565065
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| |||| |||||||| ||||||||||||||| ||||||||| ||| ||||| |||| ||| | ||||||    
T  20565136 gtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccccaaccaccac 20565065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 40967432 - 40967389
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||| |||||||||||||||| |||||||||||| |||||||||    
T  40967432 gtgagcttaactcagttgataaggacaatgcataatatatgcaa 40967389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 45032685 - 45032736
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||| |||| |||| |||||||| ||||||||||||||| |||||||||    
T  45032685 ttgtcctcgtgagcttacctcagttggtagggacaatgcataatatatgcaa 45032736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 4897536 - 4897586
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||| |||||| ||||||||||||| || |||||||||||| |||||||||    
T  4897536 tgtcattgtgagcttaactcagttggtaaggacaatgcataatatatgcaa 4897586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 4944930 - 4944980
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||| |||||| ||||||||||||| || |||||||||||| |||||||||    
T  4944930 tgtcattgtgagcttaactcagttggtaaggacaatgcataatatatgcaa 4944980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 8091227 - 8091161
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||||||||| |||| |||||| | || |||||||||||| ||||||||| ||| ||||| ||||    
T  8091227 ttgtccttgtgagcttatctcagtaggtatggacaatgcataatatatgcaaggtccggggttcaaa 8091161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 203
Target Start/End: Complemental strand, 20120785 - 20120719
Alignment:
Q  137 cttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||||| |||| |||||||| || |||||||||||| ||||||||| ||  ||||| |||||||||    
T  20120785 cttgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggttcggggttcaaatcccg 20120719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 23250384 - 23250310
Alignment:
Q  137 cttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||| ||||||||||||| || | |||||||||| ||||||||| |||  |||| |||| ||||| ||||||    
T  23250384 cttgtgagcttaactcagttggtaagaacaatgcataatatatgcaaggtccagggttcaaaccccgaccaccac 23250310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 26999102 - 26999168
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||||| |||||||||  ||||||| ||| ||||||||||| ||||||||| ||||| ||| ||||    
T  26999102 ttgtcctcgtgaacttagttcagttggtagagacaatgcataatatatgcaaggtctgcggttcaaa 26999168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 29734685 - 29734755
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    ||||||||||  ||| ||||||||||| |||||||||||| ||||||||| ||| | ||| |||| |||||    
T  29734685 gtccttgtgagtttagctcagttgatatggacaatgcataatatatgcaaggtccgtggttcaaaccccga 29734755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 29896362 - 29896284
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||| ||||  |||| |||||||||||  |||||||||| ||||||||| || |||||| |||| ||||| ||||||    
T  29896362 tgtcctcgtgagtttaattcagttgatagaaacaatgcataatatatgcaaggtttggggttcaaaccccgaccaccac 29896284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 33063979 - 33064029
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| |||| |||| ||||||||||| |||||||||||| |||||||||    
T  33063979 tgtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaa 33064029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 34191364 - 34191306
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||| |||||||| ||||||||||||||| |||||| |||||||  ||| |||||||||    
T  34191364 cttagctcagttggtagggacaatgcataatatatgtaaagtctaaggttcaaatcccg 34191306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 36264547 - 36264469
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||||| ||||| ||| ||| || ||| |||||||| ||||||||||||  ||||| |||| ||||| ||||||    
T  36264547 tgtccttgtgagcttaattcaattggtatggataatgcataatatatgcaaagttcggggttcaaaccccgaccaccac 36264469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 36474767 - 36474821
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaat 199  Q
    |||| ||||||||||||||||||||||||  |||||||| ||| ||||| |||||    
T  36474767 cttagctcagttgatagggacaatgcataaaatatgcaaggtccggggttcaaat 36474821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 191
Target Start/End: Original strand, 44868412 - 44868470
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    ||||||||| || ||||| ||||||||| |||||||||||| |||||| || |||||||    
T  44868412 tgtccttgtaaatttaacacagttgataaggacaatgcataatatatgtaaggtctggg 44868470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 7537116 - 7537153
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  7537116 ttaactcagttgataggaacaatgcataatatatgcaa 7537153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 13196694 - 13196743
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||||||||||||||||| || | |||||||||| |||||||||    
T  13196694 gtcctcgtgaacttaactcagttggtatgaacaatgcataatatatgcaa 13196743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 142 - 183
Target Start/End: Original strand, 22359007 - 22359048
Alignment:
Q  142 gaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||||||| || |||||||||||| |||||||||    
T  22359007 gaacttaactcagttggtaaggacaatgcataatatatgcaa 22359048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 203
Target Start/End: Original strand, 29544621 - 29544690
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||| |||| |||| |||| ||| ||||||||||||||| ||||||||| ||| ||||| |||| ||||    
T  29544621 gtcctagtgagcttagctcaattggtagggacaatgcataatatatgcaaggtccggggttcaaaccccg 29544690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 34977198 - 34977247
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||| ||||||||||||| || |||||||||||| |||||||||    
T  34977198 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaa 34977247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 36615099 - 36615046
Alignment:
Q  135 tccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtct 188  Q
    |||| |||| ||||||||||||| || |||||||| ||||||||||||| ||||    
T  36615099 tcctcgtgagcttaactcagttggtatggacaatggatagtatatgcaaggtct 36615046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 37670548 - 37670471
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| |||||||||| |||||||| || | |||||| ||| ||||||||||| ||||||| |||| || || ||||||    
T  37670548 gtccctgtgaacttagctcagttggtaagaacaatgtataatatatgcaaagcctggggttcaaaccctgagcaccac 37670471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 39761448 - 39761489
Alignment:
Q  150 ctcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    ||||||||||| |||||||||||| ||||||||| |||||||    
T  39761448 ctcagttgataaggacaatgcataatatatgcaaggtctggg 39761489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 211
Target Start/End: Original strand, 44110948 - 44111021
Alignment:
Q  138 ttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||| |||| |||||||| |||| ||| ||||||||||||| ||||||| |||| |||| ||| | ||||||    
T  44110948 ttgtgagcttagctcagttggtaggaacagtgcatagtatatgtaaagtctagggttcaaaccccaaccaccac 44111021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 16033518 - 16033453
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||| |||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  16033518 tgtcctcgtgagcttgactcagttgatagggacaatgcataatatatgcaaggtctggggttcaaa 16033453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 28832240 - 28832161
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| ||||||| ||||||||||||| || | |||||||||| ||||||||| ||||| ||| |||||||||| ||||||    
T  28832240 ttgttcttgtgagcttaactcagttggtatgaacaatgcataatatatgcaaggtctgaggttcaaatcccgaccaccac 28832161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 33153947 - 33153870
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||| ||||||||||||| ||||||||||||||| |||||| || ||| | ||| |||| ||||| ||||||    
T  33153947 gtccttgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaaccccgaacaccac 33153870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 26803518 - 26803454
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||| ||||||||| |||||||| || |||||||||||| ||||||||||||| ||||| ||||    
T  26803518 gtcctcgtgaacttagctcagttggtatggacaatgcataatatatgcaaagtccggggttcaaa 26803454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 134 - 193
Target Start/End: Original strand, 12213987 - 12214046
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||||||| |||| ||||||||||||| ||||| |||| ||||||||| |||||||||    
T  12213987 gtccttgtgagcttagctcagttgataggaacaatacataatatatgcaaggtctggggt 12214046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 32944728 - 32944807
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||| |||| || ||||| || |||||||||||| ||||||||| ||||||||| | || ||||| ||||||    
T  32944728 ttgtccttgtgagcttagcttagttggtatggacaatgcataatatatgcaacgtctggggttcgaaccccgaccaccac 32944807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 36467094 - 36467015
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||| ||||| ||| |||||| |||||||||||| ||||||||| || |  ||| |||||||||| ||||||    
T  36467094 ttgtccttgtgagcttaattcaattgatatggacaatgcataatatatgcaaggtataaggttcaaatcccgaccaccac 36467015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 52267757 - 52267828
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    |||||| |||| ||||||||||||| || ||||||||||||  |||||||| ||||||| | ||||||||||    
T  52267757 tgtcctcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaaggtctgggattcaaatcccga 52267828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 5864147 - 5864205
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatg-catagtatatgcaaagtctg 189  Q
    |||||||||||||||||||||||||||| | ||||||| |||| ||||||||| |||||    
T  5864147 ttgtccttgtgaacttaactcagttgatggagacaatgccataatatatgcaaggtctg 5864205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 17669638 - 17669688
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||||||| ||| ||||||||||||||||||||| ||| |||||||||    
T  17669638 tgtccttgtgagcttgactcagttgatagggacaatgtataatatatgcaa 17669688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 18091195 - 18091257
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcat-agtatatgcaaagtctggggt 193  Q
    ||||||| |||| |||||||||||||||||||||||||||| | ||||| ||||||| |||||    
T  18091195 ttgtcctcgtgagcttaactcagttgatagggacaatgcataaatatatacaaagtccggggt 18091257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 32075312 - 32075262
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||||||||| ||||||||||| ||||||| ||||||||||||||    
T  32075312 tgtccctgtgaacttagctcagttgataaggacaatacatagtatatgcaa 32075262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 17139584 - 17139507
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| |||| |||||||| ||||||||||||||| ||||| ||| ||| ||||| |||| ||||| ||||||    
T  17139584 gtcctcgtgagcttagctcagttggtagggacaatgcataatatattcaaggtccggggttcaaaccccgaccaccac 17139507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 41142754 - 41142697
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctgg 190  Q
    |||||| || ||||| ||||||||||||| ||||||||||| ||||||||| ||||||    
T  41142754 tgtcctcgtaaacttgactcagttgatagagacaatgcataatatatgcaaggtctgg 41142697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 46334772 - 46334845
Alignment:
Q  137 cttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacca 210  Q
    |||||||||||||||||||||||| | ||||||||||  |||| ||| ||||| | | |||| |||||||||||    
T  46334772 cttgtgaacttaactcagttgataagaacaatgcataaaatatacaaggtctgagattcaaaccccgatcacca 46334845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 180
Target Start/End: Original strand, 10292936 - 10292976
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatg 180  Q
    |||| ||||||||||||||||||||||||||||| ||||||    
T  10292936 gtgagcttaactcagttgatagggacaatgcataatatatg 10292976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 40922783 - 40922735
Alignment:
Q  135 tccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||| ||||| |||||||||||||||  |||||||||||||||||||||    
T  40922783 tcctcgtgaatttaactcagttgataatgacaatgcatagtatatgcaa 40922735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 42841192 - 42841144
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||||||||| || ||||| |||||| |||||||||||||||||||    
T  42841192 cttaactcagttggtaaggacagtgcatattatatgcaaagtctggggt 42841144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 2889987 - 2889944
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||    
T  2889987 gtgagcttaactcagttggtagggacaatgcataatatatgcaa 2889944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 173
Target Start/End: Original strand, 17058702 - 17058741
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcata 173  Q
    ||||| ||||||||||||||||||||||||||| ||||||    
T  17058702 gtcctcgtgaacttaactcagttgatagggacattgcata 17058741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 21400090 - 21400031
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||| |||| |||| |||||||| ||||||||||||||| ||||||||| |||| ||||    
T  21400090 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtcttgggt 21400031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 25086477 - 25086544
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcc 201  Q
    |||||||||| |||| |||||||| || ||||||||||||  |||||||| |||| |||| |||||||    
T  25086477 gtccttgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtctagggttcaaatcc 25086544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 189
Target Start/End: Complemental strand, 28039923 - 28039872
Alignment:
Q  138 ttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctg 189  Q
    |||||| ||||||||||||| || |||||||||||| ||||||||| |||||    
T  28039923 ttgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtctg 28039872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 29935975 - 29936026
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||||||||  |||||||||||| || |||||||||||| |||||||||    
T  29935975 ttgtccttgtgagtttaactcagttggtatggacaatgcataatatatgcaa 29936026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 30678881 - 30678834
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatg 180  Q
    |||||| |||| ||||||||||||| ||||||||||||||| ||||||    
T  30678881 tgtcctcgtgagcttaactcagttggtagggacaatgcataatatatg 30678834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 31061972 - 31061921
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||  ||||||||||||||||| || |||||||||||| |||||||||    
T  31061972 ttgtcctcatgaacttaactcagttggtaaggacaatgcatattatatgcaa 31061921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 10356782 - 10356705
Alignment:
Q  134 gtccttgtgaacttaactcagttgatag-ggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||| ||| ||||||||||||||||| | | |||||||| ||||||||| ||||||||| |||| ||||| ||||||    
T  10356782 gtccttatgagcttaactcagttgatagagaaaaatgcataatatatgcaaggtctggggttcaaa-cccgaccaccac 10356705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 10841897 - 10841939
Alignment:
Q  137 cttgtgaacttaactcagttgatagggacaatgcatagtatat 179  Q
    ||||||| |||||||||||||||| |||||||||||| |||||    
T  10841897 cttgtgagcttaactcagttgatatggacaatgcataatatat 10841939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 13054866 - 13054916
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||||||| |||| || ||||| ||||||||||||||| |||||||||    
T  13054866 tgtccttgtgagcttagcttagttggtagggacaatgcataatatatgcaa 13054916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 18462164 - 18462114
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||||||||||||||| |||| ||| |||||| ||||| |||||||||    
T  18462164 tgtccttgtgaacttaacttagttaataaggacaacgcataatatatgcaa 18462114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 39949817 - 39949883
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||||||| || | |||||||||| ||||| ||| ||||||||| | |||||||| ||||||    
T  39949817 cttaactcagttggtaagaacaatgcataatatatacaaggtctggggttcgaatcccgaccaccac 39949883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 203
Target Start/End: Complemental strand, 42045440 - 42045370
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||||| |||| |||| |||||||| || |||||||||||| ||||||||| |||||| || |||| ||||    
T  42045440 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggagttcaaaccccg 42045370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 1408440 - 1408481
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagt 186  Q
    ||||||||||||| || |||||||||||| ||||||||||||    
T  1408440 cttaactcagttggtaaggacaatgcataatatatgcaaagt 1408481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 179
Target Start/End: Complemental strand, 2884515 - 2884470
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatat 179  Q
    ||||| |||| |||||||||||||||| |||||||||||| |||||    
T  2884515 gtcctcgtgaccttaactcagttgatatggacaatgcataatatat 2884470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 6809860 - 6809807
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||||| |||||||  || |||||||||||| ||||||||| |||||||||    
T  6809860 gtgaacttagctcagtttgtaaggacaatgcataatatatgcaatgtctggggt 6809807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 183
Target Start/End: Complemental strand, 7574173 - 7574136
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||| || ||||||||||||||||||||||    
T  7574173 ttaactcagttggtaaggacaatgcatagtatatgcaa 7574136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 9265899 - 9265846
Alignment:
Q  138 ttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    |||||||||||||||||||| || |||||||| ||| || |||||| |||||||    
T  9265899 ttgtgaacttaactcagttggtatggacaatgtataatacatgcaaggtctggg 9265846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 10132505 - 10132452
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||||||  ||||||| || |||||||||||| ||||||||| |||||||||    
T  10132505 gtgaacttagatcagttggtaaggacaatgcataatatatgcaaggtctggggt 10132452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 27533237 - 27533314
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| ||||  ||||||| ||||||||||||||| ||||||||| ||  ||||| |||| ||||| ||||||    
T  27533237 gtcctcgtgagcttagatcagttggtagggacaatgcataatatatgcaaggttcggggttcaaaccccgaccaccac 27533314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 32497537 - 32497484
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||||||||||| |||| |||||||||| ||||||||| |||| |||| ||||    
T  32497537 cttaactcagttggtaggaacaatgcataatatatgcaaggtctagggttcaaa 32497484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 41573339 - 41573290
Alignment:
Q  131 gttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatg 180  Q
    |||||||| ||||  |||||||||||| ||||||||||||||| ||||||    
T  41573339 gttgtcctcgtgagtttaactcagttggtagggacaatgcataatatatg 41573290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 99031 - 99095
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||| |||| ||| ||||||||||||||||||||||||| ||||||||| ||||||||| ||||    
T  99031 gtcctcgtgagcttgactcagttgatagggacaatgcataatatatgcaaggtctggggttcaaa 99095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 7996932 - 7997011
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||| |||| |||||||| || |||||| ||||| ||||||||| ||||||||| |||| ||||| ||||||    
T  7996932 ttgtccttgtgagcttagctcagttggtatggacaacgcataatatatgcaaggtctggggttcaaaccccgaccaccac 7997011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 39821877 - 39821942
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||| |||| |||| |||||||| ||||||||||||||| ||||||||| ||||||||| ||||    
T  39821877 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtctggggttcaaa 39821942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 5586116 - 5586164
Alignment:
Q  28 cttttaccccctatcaataaagtgtcatcagcaaactgaagatgggaaa 76  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||    
T  5586116 cttttaccccatatcaataaagtgtcatcagcaaacgaaagatgggaaa 5586164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 29376892 - 29376972
Alignment:
Q  131 gttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||| |||| ||||||||||||| || ||||||||| || ||||||||| |||||| || |||| ||||| ||||||    
T  29376892 gttgtcctcgtgagcttaactcagttggtatggacaatgcgtaatatatgcaaggtctggagttcaaaccccgaccaccac 29376972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 8837913 - 8837959
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatat 179  Q
    |||||| ||||||||||||| |||||||||||||||||||| |||||    
T  8837913 tgtcctcgtgaacttaactcggttgatagggacaatgcataatatat 8837959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 13272583 - 13272534
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctg 189  Q
    ||||||||||||||||||||| |||||||||||| |||||| || |||||    
T  13272583 gtgaacttaactcagttgatatggacaatgcataatatatgtaatgtctg 13272534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 29546898 - 29546951
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||||||||||||||||||||||  ||| ||||||||| ||||||||| ||||    
T  29546898 cttaactcagttgatagggacaatagataatatatgcaaggtctggggttcaaa 29546951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 209
Target Start/End: Original strand, 24195246 - 24195318
Alignment:
Q  137 cttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacc 209  Q
    |||||||||||| ||||||||||| | ||||| |||| ||||||||| ||| ||||| ||||  |||||||||    
T  24195246 cttgtgaacttagctcagttgatatgaacaatacataatatatgcaaggtccggggttcaaactccgatcacc 24195318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 30623286 - 30623346
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||| ||||| |||| |||||||| || |||||||||||| ||||||||| |||||||||    
T  30623286 tgtccctgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtctggggt 30623346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 190
Target Start/End: Complemental strand, 32223946 - 32223890
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctgg 190  Q
    ||||| |||| ||||  ||||||||||| ||||||||||| ||||||||||||||||    
T  32223946 gtcctcgtgagcttagttcagttgatagagacaatgcataatatatgcaaagtctgg 32223890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 193
Target Start/End: Complemental strand, 2554279 - 2554220
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||||||| |||| ||||||||||| ||||||| ||||  |||||||| |||||||||    
T  2554279 gtccttgtgagcttagctcagttgatatggacaatacataaaatatgcaaggtctggggt 2554220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 7553671 - 7553722
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||| ||||  |||||||||||| ||||||||||||||| |||||||||    
T  7553671 ttgtcctcgtgagtttaactcagttggtagggacaatgcataatatatgcaa 7553722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 15079213 - 15079170
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||    
T  15079213 gtgagcttaactcagttggtagggacaatgcataatatatgcaa 15079170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 18638093 - 18638164
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    |||||| ||||||||| |||||||| | || ||||||||||  ||||||||||| |||||| |||| |||||    
T  18638093 tgtcctagtgaacttagctcagttggttggaacaatgcataaaatatgcaaagtatggggttcaaaccccga 18638164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 26773863 - 26773792
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| |||| || |||| ||| |||| ||||||| ||||||||| |||| |||| |||||||||||||||||    
T  26773863 gtgagcttagcttagttaataaggacgatgcataatatatgcaaggtctagggttcaaatcccgatcaccac 26773792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 56872 - 56822
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||||||| ||||||||| ||| || |||||||||||| |||||||||    
T  56872 tgtccttgtgagcttaactcaattggtatggacaatgcataatatatgcaa 56822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 190
Target Start/End: Complemental strand, 6038336 - 6038286
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctgg 190  Q
    ||||||||| ||||||||||| |||||||||||| |||||| || ||||||    
T  6038336 gtgaacttagctcagttgatatggacaatgcataatatatgtaaggtctgg 6038286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 6394825 - 6394775
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| ||||||||| ||||||||||||||||||  |||| |||||||||    
T  6394825 tgtcctcgtgaacttacctcagttgatagggacaaaacataatatatgcaa 6394775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 24023881 - 24023823
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctgg 190  Q
    |||||||||||| | ||||||||||| || ||||||||||||  |||||||| ||||||    
T  24023881 ttgtccttgtgagcgtaactcagttggtatggacaatgcataaaatatgcaaggtctgg 24023823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 1244766 - 1244713
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||||| |||||||| || |||||||||||| ||||| ||| |||||||||    
T  1244766 gtgaacttagctcagttggtaaggacaatgcataatatatacaaggtctggggt 1244713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 201
Target Start/End: Original strand, 4263815 - 4263876
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcc 201  Q
    ||||||||||||||||||||| | |||||||||| | ||||||| ||| | ||| |||||||    
T  4263815 gtgaacttaactcagttgataagaacaatgcataatgtatgcaaggtccgaggttcaaatcc 4263876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 11708980 - 11709029
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||| |||| |||||||| ||||||||||||||| |||||||||    
T  11708980 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 11709029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 13105100 - 13105137
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  13105100 ttaactcagttggtagggacaatgcataatatatgcaa 13105137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 13357508 - 13357459
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||| ||||||||||||| || |||||||||||| |||||||||    
T  13357508 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaa 13357459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 19163603 - 19163526
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| |||| |||||||| || |||||||||||| | ||||||| ||| ||||| |||| ||||| ||||||    
T  19163603 gtcctcgtgagcttagctcagttggtatggacaatgcataatttatgcaaggtccggggttcaaaccccgaccaccac 19163526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 193
Target Start/End: Complemental strand, 22948130 - 22948089
Alignment:
Q  152 cagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||||||||||||||||||| ||||||||| ||| |||||    
T  22948130 cagttgatagggacaatgcataatatatgcaaggtccggggt 22948089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 23159439 - 23159484
Alignment:
Q  138 ttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||||||| || ||| |||||||||||| |||||||||    
T  23159439 ttgtgaacttaactcaattcatatggacaatgcataatatatgcaa 23159484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 27718961 - 27718912
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||| |||| ||||||||||| |||||||||||| |||||||||    
T  27718961 gtcctcgtgagcttagctcagttgatatggacaatgcataatatatgcaa 27718912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 33373820 - 33373755
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||| |||| ||||||||||||| || ||||||| |||| |||||| || ||||||||| ||||    
T  33373820 tgtcctcgtgaccttaactcagttggtatggacaattcataatatatgtaaggtctggggttcaaa 33373755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 182
Target Start/End: Complemental strand, 42200730 - 42200681
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgca 182  Q
    |||||| |||| |||| |||||||||||||||||||| ||| ||||||||    
T  42200730 tgtcctcgtgagcttagctcagttgatagggacaatgtataatatatgca 42200681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 25441569 - 25441498
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||| ||||||||||| |||||||| || |||||||||||| ||||||||| ||||||||| |||| ||||    
T  25441569 ttgtctttgtgaacttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcaaaccccg 25441498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 132 - 203
Target Start/End: Original strand, 53996291 - 53996362
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||||||||||| |||| |||||||| || |||||||||||| ||||||||| ||||||||| | |||||||    
T  53996291 ttgtccttgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggggttcgaatcccg 53996362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 1111896 - 1111838
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    ||||||||||||||||||||||| |||| ||||||||| ||||||||| |||| |||||    
T  1111896 ttaactcagttgatagggacaatacataatatatgcaaggtctggggttcaaaccccga 1111838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 7464558 - 7464481
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| ||||||||||||| ||||||||||||||| |||||| || ||| ||||| |||| ||||| ||||||    
T  7464558 gtcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccggggttcaaaccccgaccaccac 7464481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 12976657 - 12976612
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    |||||||||||||||||||||||||||| ||||||||| |||||||    
T  12976657 ttaactcagttgatagggacaatgcataatatatgcaaggtctggg 12976612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 38131026 - 38130957
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||||||||| ||||||||||||| || |||||||||||| ||||||||| ||| ||||| |||| ||||    
T  38131026 gtccttgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccg 38130957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Complemental strand, 22733436 - 22733388
Alignment:
Q  28 cttttaccccctatcaataaagtgtcatcagcaaactgaagatgggaaa 76  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||    
T  22733436 cttttaccccatatcaataaagtgtcatcagcaaacgaaagatgggaaa 22733388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 34899087 - 34899167
Alignment:
Q  130 tgttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacca 210  Q
    ||||||||| |||| |||| |||||||  ||||||||||||||| ||||||||| ||| ||||| |||| ||||| |||||    
T  34899087 tgttgtcctcgtgatcttagctcagttcgtagggacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 34899167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 42401438 - 42401490
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||||||||| ||||||||||||||||||||||||| ||||| ||| ||||    
T  42401438 ttaactcagttggtagggacaatgcatagtatatgcaaggtctgcggttcaaa 42401490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 7651186 - 7651225
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatat 179  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  7651186 gtgagcttaactcagttgatagggacaatgcatagtatat 7651225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 47039427 - 47039498
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| |||||||||| ||||| |||||||||||| ||||||||||||  ||||| | |||||||| ||||||    
T  47039427 gtgagcttaactcagatgataaggacaatgcataatatatgcaaagttcggggttcgaatcccgaccaccac 47039498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 1757737 - 1757679
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    |||||| |||| ||||||||||||| |||| |||||||||| ||||||||| |||||||    
T  1757737 tgtcctcgtgagcttaactcagttggtaggaacaatgcataatatatgcaacgtctggg 1757679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 2078240 - 2078298
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||||||||||||||| ||| ||||||||||| ||||||||| || |||||| ||||    
T  2078240 gtgaacttaactcagttggtagagacaatgcataatatatgcaaggtttggggttcaaa 2078298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 4216467 - 4216417
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| ||||||||| ||||||||||| |||||||||||| |||||||||    
T  4216467 tgtcctcgtgaacttagctcagttgataaggacaatgcataatatatgcaa 4216417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 7738661 - 7738722
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||| |||| ||||||||||||| |||||||||||||||  |||||||| ||| |||||    
T  7738661 ttgtcctcgtgagcttaactcagttggtagggacaatgcataaaatatgcaaggtccggggt 7738722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 203
Target Start/End: Complemental strand, 35126324 - 35126267
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||||||||||| |||||| |||||||| |||||||||  |||||||| |||||||||    
T  35126324 ttaactcagttggtagggataatgcataatatatgcaagatctggggttcaaatcccg 35126267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 37921049 - 37920996
Alignment:
Q  150 ctcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||||||||||||| |||||||| ||||||||| ||||| ||| |||||||||    
T  37921049 ctcagttgatagggataatgcataatatatgcaatgtctgcggttcaaatcccg 37920996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Complemental strand, 49975861 - 49975808
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||||||||||| || |||||||||||| ||||||||| ||||||||| ||||    
T  49975861 cttaactcagttgttatggacaatgcataatatatgcaaggtctggggttcaaa 49975808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 2186488 - 2186424
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    |||||||||||||||||| || ||||||| |||| |||||| || ||||||||| |||| |||||    
T  2186488 gtgaacttaactcagttggtatggacaatacataatatatgtaaggtctggggttcaaaccccga 2186424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 204
Target Start/End: Complemental strand, 10922369 - 10922305
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||  || ||||| |||| |||||    
T  10922369 gtgagcttaactcagttggtagggacaatgcataatatatgcaagatccggggttcaaaccccga 10922305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 24145398 - 24145467
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||||||||| ||||||||||||||| ||||| ||| |||   ||| |||| ||||||||||||    
T  24145398 gtgaacttaactcagttggtagggacaatgcataatatatacaaggtc--cggttcaaaccccgatcaccac 24145467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 189
Target Start/End: Original strand, 45096027 - 45096075
Alignment:
Q  141 tgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctg 189  Q
    |||||||| ||||||||||| |||||||||||| ||||||||| |||||    
T  45096027 tgaacttagctcagttgataaggacaatgcataatatatgcaaggtctg 45096075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 45431942 - 45432006
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||||| | |||| |||||||| ||||||||||||||| ||||||||| ||| ||||| ||||    
T  45431942 gtccttgttagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaa 45432006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 179
Target Start/End: Original strand, 3613219 - 3613258
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatat 179  Q
    ||||||||||||||||||||| ||||||| ||||||||||    
T  3613219 gtgaacttaactcagttgataaggacaatacatagtatat 3613258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 5186825 - 5186884
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    ||||||| |||| |||||||||| || |||||||||||| || ||||||||| |||||||    
T  5186825 ttgtcctcgtgagcttaactcagctggtagggacaatgcttaatatatgcaaggtctggg 5186884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 7827500 - 7827579
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||| ||||  ||||||||||||||| |||||||||||| |||||| || |||||| || | || ||||| ||||||    
T  7827500 ttgtcctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggtctggagttcgaaacccgaccaccac 7827579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 13829132 - 13829085
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||||||||  ||||||||||||||| ||||||||| |||||||||    
T  13829132 ttaactcagtttttagggacaatgcataatatatgcaaggtctggggt 13829085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 19468443 - 19468494
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||||| ||||||||||||| || |||||||||||| |||||||||    
T  19468443 ttgtctttgtgagcttaactcagttggtatggacaatgcataatatatgcaa 19468494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 25016348 - 25016395
Alignment:
Q  136 ccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||||  |||||||||||||| |||||||| |||||||||    
T  25016348 ccttgtgaacttacttcagttgatagggataatgcataatatatgcaa 25016395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 29687074 - 29687153
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||| |||| |||| ||||||||||| |||||||  ||| ||||||||| || |  ||| |||||||||||||||||    
T  29687074 ttgtcctcgtgagcttagctcagttgatatggacaatatatattatatgcaaggtttaaggttcaaatcccgatcaccac 29687153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 3177029 - 3176983
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    ||||||||||||| |||| |||||||||| ||||||||| |||||||    
T  3177029 cttaactcagttggtaggaacaatgcataatatatgcaaggtctggg 3176983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 8942017 - 8942067
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctgg 190  Q
    |||| ||||||||||||| || | |||||||||| ||||||||||||||||    
T  8942017 gtgagcttaactcagttggtatgaacaatgcataatatatgcaaagtctgg 8942067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 71
Target Start/End: Complemental strand, 17152748 - 17152714
Alignment:
Q  37 cctatcaataaagtgtcatcagcaaactgaagatg 71  Q
    ||||||||||||||||| |||||||||||||||||    
T  17152748 cctatcaataaagtgtcgtcagcaaactgaagatg 17152714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 17588362 - 17588424
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatccc 202  Q
    |||| ||||||||||||| || |||||||||||| |||||||||  |||||||| | ||||||    
T  17588362 gtgagcttaactcagttggtaaggacaatgcataatatatgcaagatctggggttcgaatccc 17588424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 198
Target Start/End: Original strand, 21160052 - 21160110
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||||||||||||||||||| ||| |||||||| |||||| || ||| ||||| ||||    
T  21160052 gtgaacttaactcagttgatatggataatgcataatatatgtaaggtcgggggttcaaa 21160110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 170
Target Start/End: Complemental strand, 22762432 - 22762394
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgc 170  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  22762432 ttgtccttgtgagcttaactcagttgataggaacaatgc 22762394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 179
Target Start/End: Original strand, 32753821 - 32753867
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatat 179  Q
    |||||| |||| ||| ||||||||||||||||||||||||| |||||    
T  32753821 tgtcctcgtgagcttgactcagttgatagggacaatgcataatatat 32753867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 211
Target Start/End: Original strand, 33404233 - 33404299
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| ||||||||||| ||||||| |||| |||||| ||||| || ||| ||||| |||||||||||    
T  33404233 cttagctcagttgatatggacaatacataatatatgtaaagtttgaggttcaaattccgatcaccac 33404299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 135 - 173
Target Start/End: Complemental strand, 48264031 - 48263993
Alignment:
Q  135 tccttgtgaacttaactcagttgatagggacaatgcata 173  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  48264031 tccttgtgagcttagctcagttgatagggacaatgcata 48263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 211
Target Start/End: Complemental strand, 51250301 - 51250223
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||| |||| ||||||||||||| || |||||||| ||| ||||||||| | |||  || |||| ||||||||||||    
T  51250301 tgtcctcgtgagcttaactcagttggtaaggacaatgtataatatatgcaaggcctgaagttcaaaccccgatcaccac 51250223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 189
Target Start/End: Original strand, 7829888 - 7829945
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctg 189  Q
    ||||||| ||||  ||||||||||||||| |||||||||||| |||||| || |||||    
T  7829888 ttgtcctcgtgagtttaactcagttgatatggacaatgcataatatatgtaaggtctg 7829945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 198
Target Start/End: Original strand, 8127456 - 8127521
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||| |||| ||||||||||||| || ||||||||||||  |||||||| || |||||| ||||    
T  8127456 tgtcctcgtgagcttaactcagttggtaaggacaatgcataaaatatgcaaggtttggggttcaaa 8127521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 18870792 - 18870743
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||| |||| |||||||| ||||||||||||||| |||||||||    
T  18870792 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 18870743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 211
Target Start/End: Complemental strand, 25728006 - 25727957
Alignment:
Q  162 ggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||||| ||||||||| ||| ||||| |||||||||| ||||||    
T  25728006 ggacaatgcataatatatgcaaggtccggggttcaaatcccgaccaccac 25727957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 28244171 - 28244094
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| ||||||||||||| || | ||||||||||  |||||||| ||| ||||| | || ||||||||||||    
T  28244171 gtcctcgtgagcttaactcagttggtatgaacaatgcataaaatatgcaaggtccggggttcgaaccccgatcaccac 28244094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 38387966 - 38388015
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||| |||| |||||||||||| ||||||||||| |||||||||    
T  38387966 gtcctcgtgagcttagctcagttgatagtgacaatgcataatatatgcaa 38388015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.000000000001; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 21318309 - 21318243
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||| |||| |||| ||||| ||||||    
T  21318309 cttaactcagttggtagggacaatgcataatatatgcaaggtctagggttcaaaccccgaccaccac 21318243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 8494979 - 8495030
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||| ||||||||| |||||||| ||||||||||||||| |||||||||    
T  8494979 ttgtcctcgtgaacttagctcagttggtagggacaatgcataatatatgcaa 8495030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 133 - 188
Target Start/End: Complemental strand, 15170167 - 15170112
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtct 188  Q
    |||||| |||||||||||||||||| || | |||||||||| ||||||||||||||    
T  15170167 tgtcctcgtgaacttaactcagttggtatgaacaatgcataatatatgcaaagtct 15170112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 24063277 - 24063226
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||| ||| ||||||||||||||||| ||||||||||| |||||||||    
T  24063277 ttgtccttatgatcttaactcagttgatagagacaatgcataatatatgcaa 24063226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 19479546 - 19479468
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacca 210  Q
    |||||||||||| |||| ||||||| ||| | |||||||||| ||||||||| ||| ||||| |||| ||||| |||||    
T  19479546 ttgtccttgtgagcttagctcagttaatatgaacaatgcataatatatgcaaggtccggggttcaaaccccgaccacca 19479468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 142 - 204
Target Start/End: Complemental strand, 36489447 - 36489385
Alignment:
Q  142 gaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccga 204  Q
    ||||||| || ||||| ||||||||||||||| ||||||||||||| |||||  |||||||||    
T  36489447 gaacttagcttagttgttagggacaatgcataatatatgcaaagtcaggggtttaaatcccga 36489385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 39489599 - 39489649
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||||||| ||||| |||||||||||| ||||| ||||||||||||||    
T  39489599 tgtccttgtgagcttaattcagttgataggaacaatacatagtatatgcaa 39489649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 51436674 - 51436624
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| ||||||||||||||||||||| | |||||||||| |||||||||    
T  51436674 tgtcctcgtgaacttaactcagttgatacgaacaatgcataatatatgcaa 51436624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 7230269 - 7230338
Alignment:
Q  129 atgttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||||||| |||| |||| |||||||| || |||||||||||| ||||||||| ||| ||||| ||||    
T  7230269 atgttgtcctcgtgagcttagctcagttggtaaggacaatgcataatatatgcaaggtccggggttcaaa 7230338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 183
Target Start/End: Complemental strand, 12712085 - 12712036
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||||||||||||| ||||||| ||||||||||| |||||||||    
T  12712085 gtcctcgtgaacttaactcatttgatagagacaatgcataatatatgcaa 12712036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 18635530 - 18635583
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||| |||||||||||||||| |||||||||||| ||||| ||| |||||||||    
T  18635530 gtgagcttaactcagttgataaggacaatgcataatatatacaaggtctggggt 18635583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 20799461 - 20799384
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| |||| |||||||| ||||||||||||||| ||||||||| ||| ||||| |||| || | |||||||    
T  20799461 gtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaaggtccggggttcaaaccctggtcaccac 20799384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 43034409 - 43034340
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||| |||| ||||||||||||| || |||||||||||| ||||||||| ||||| ||| |||| ||||    
T  43034409 gtcctcgtgagcttaactcagttggtatggacaatgcataatatatgcaaggtctgaggttcaaaccccg 43034340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 146 - 211
Target Start/End: Original strand, 54162705 - 54162770
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||| || || |||||||||||||||||||||| || |||||  |||||||||| ||||||    
T  54162705 ttaactcagctggtatggacaatgcatagtatatgcaaggtatggggctcaaatcccgaccaccac 54162770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 193
Target Start/End: Complemental strand, 11144725 - 11144673
Alignment:
Q  141 tgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||||| |||||||||||  ||||||||||| ||||||||| |||||||||    
T  11144725 tgaacttacctcagttgataaagacaatgcataatatatgcaaggtctggggt 11144673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 29908047 - 29908127
Alignment:
Q  131 gttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||| | |||| ||||||||||||| || |||||||||||| ||||||||| ||| || || |||| | ||||||||||    
T  29908047 gttgtcttcgtgagcttaactcagttggtaaggacaatgcataatatatgcaaggtccggagttcaaacctcgatcaccac 29908127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 42756168 - 42756124
Alignment:
Q  139 tgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||| ||||||||||| |||||||||||| |||||||||    
T  42756168 tgtgaacttagctcagttgataaggacaatgcataatatatgcaa 42756124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 48226559 - 48226491
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcac 208  Q
    ||||||||| |||| ||| || ||||||||||||  |||||||| ||||||||| ||||||||| ||||    
T  48226559 gtgaacttagctcaattggtatggacaatgcataaaatatgcaaggtctggggttcaaatcccggtcac 48226491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 13276121 - 13276172
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||| |||| ||||||||| ||| ||||||||||||||| |||||||||    
T  13276121 ttgtcctcgtgagcttaactcaattggtagggacaatgcataatatatgcaa 13276172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 16431616 - 16431679
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    ||||||||| |||||||| || ||||||||||||  |||||||| ||||||||| |||| ||||    
T  16431616 gtgaacttagctcagttggtatggacaatgcataaaatatgcaaggtctggggttcaaaccccg 16431679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 23619101 - 23619172
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||| |||||||| |||||||||||||||  |||| ||||||  ||||| ||||| |||| ||||||    
T  23619101 gtgaacttacctcagttggtagggacaatgcataaaatatacaaagttcggggttcaaattccgaccaccac 23619172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 27655723 - 27655782
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    |||| ||||||||||||  |||||||||||  |||||||||| ||||||||| |||||||    
T  27655723 ttgttcttgtgaacttagttcagttgatagaaacaatgcataatatatgcaaggtctggg 27655782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 203
Target Start/End: Original strand, 38374957 - 38375020
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccg 203  Q
    |||| ||||||| ||||| ||||||||||||||| ||||||||| |||||| || |||| ||||    
T  38374957 gtgagcttaacttagttggtagggacaatgcataatatatgcaaggtctggagttcaaaccccg 38375020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 40847135 - 40847084
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaa 184  Q
    ||||| ||||| ||||||||||||||||| |||||| |||| ||||||||||    
T  40847135 tgtccatgtgagcttaactcagttgatagagacaatacataatatatgcaaa 40847084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 42845015 - 42845078
Alignment:
Q  130 tgttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    ||||||||| |||| |||||||||||||  | |||||||||||| ||||||||| ||| |||||    
T  42845015 tgttgtcctcgtgagcttaactcagttggaaaggacaatgcataatatatgcaaggtccggggt 42845078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 48067141 - 48067204
Alignment:
Q  148 aactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||||| ||||||||||| ||| ||||||||| |  || ||| |||||||||||||||||    
T  48067141 aactcagttggtagggacaatgtataatatatgcaaggcatgaggttcaaatcccgatcaccac 48067204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 198
Target Start/End: Original strand, 6087739 - 6087805
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||||||||| |||| |||||||| ||  || |||||||| ||||||||| ||||||||| ||||    
T  6087739 ttgtccttgtgagcttagctcagttggtatagataatgcataatatatgcaaggtctggggttcaaa 6087805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 145 - 211
Target Start/End: Complemental strand, 11949819 - 11949753
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| |||||||| || |||||||||||| ||||||||| ||| ||||| |||| ||||| ||||||    
T  11949819 cttagctcagttggtatggacaatgcataatatatgcaaggtccggggttcaaaccccgaccaccac 11949753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 183
Target Start/End: Original strand, 12439665 - 12439707
Alignment:
Q  141 tgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||| ||||||||||| |||||||||||| |||||||||    
T  12439665 tgaacttagctcagttgataaggacaatgcataatatatgcaa 12439707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 16743352 - 16743302
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||||||||| |||| ||||||||||| ||| |||||||| |||||||||    
T  16743352 tgtccttgtgagcttagctcagttgatatggataatgcataatatatgcaa 16743302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 17423246 - 17423180
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    |||||||| |||  |||||||||||| ||| ||||||||||| ||||||||| ||| ||||| ||||    
T  17423246 ttgtccttctgaggttaactcagttggtagagacaatgcataatatatgcaaggtccggggttcaaa 17423180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 186
Target Start/End: Complemental strand, 19332370 - 19332316
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagt 186  Q
    ||||||| |||| |||| ||||| ||||| |||||||||||| ||||||||||||    
T  19332370 ttgtcctcgtgagcttatctcagatgataaggacaatgcataatatatgcaaagt 19332316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 134 - 180
Target Start/End: Original strand, 30135134 - 30135180
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatg 180  Q
    |||||||||| |||||||||||||||| ||| |||||||| ||||||    
T  30135134 gtccttgtgagcttaactcagttgataaggataatgcataatatatg 30135180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 36203229 - 36203279
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| |||| |||| ||||||||||| |||||||||||| |||||||||    
T  36203229 tgtcctcgtgagcttagctcagttgataaggacaatgcataatatatgcaa 36203279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 139 - 173
Target Start/End: Original strand, 37209040 - 37209074
Alignment:
Q  139 tgtgaacttaactcagttgatagggacaatgcata 173  Q
    |||||||||||||||||||||||||||| ||||||    
T  37209040 tgtgaacttaactcagttgatagggacattgcata 37209074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 47007370 - 47007320
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||| |||||| ||||||||||||| |||||||||| |||| |||||||||    
T  47007370 tgtcattgtgagcttaactcagttgttagggacaatacataatatatgcaa 47007320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Complemental strand, 50362207 - 50362157
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| |||| |||| |||||||| ||||||||||||||| |||||||||    
T  50362207 tgtcctcgtgagcttagctcagttggtagggacaatgcataatatatgcaa 50362157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 191
Target Start/End: Complemental strand, 52270098 - 52270040
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggg 191  Q
    |||||| |||| |||| |||||||| || |||||||||||| ||||||||| |||||||    
T  52270098 tgtcctcgtgagcttagctcagttggtatggacaatgcataatatatgcaaggtctggg 52270040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Complemental strand, 7371609 - 7371556
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||| |||||||||||||||| ||||||| |||| ||||||||| ||| |||||    
T  7371609 gtgagcttaactcagttgataaggacaatacataatatatgcaaggtccggggt 7371556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 9946421 - 9946498
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| |||| |||||||| || ||||||||||||  |||||||| ||| ||||| |||| ||||| ||||||    
T  9946421 gtcctcgtgagcttagctcagttggtatggacaatgcataaaatatgcaaggtccggggttcaaaccccgaccaccac 9946498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 12698597 - 12698650
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||| |||| ||||||||||  |||||||||||| ||||||||| |||||||||    
T  12698597 gtgagcttagctcagttgatttggacaatgcataatatatgcaaggtctggggt 12698650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 190
Target Start/End: Complemental strand, 20096338 - 20096281
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctgg 190  Q
    |||||| ||||  |||||||||||| |||||| |||||||| ||||||||| ||||||    
T  20096338 tgtcctcgtgagtttaactcagttggtagggataatgcataatatatgcaaggtctgg 20096281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 189
Target Start/End: Complemental strand, 21623480 - 21623431
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctg 189  Q
    |||||||||  ||||||| ||||||||||||||| ||||||||| |||||    
T  21623480 gtgaacttagttcagttggtagggacaatgcataatatatgcaaggtctg 21623431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 22630428 - 22630351
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcacca 210  Q
    |||||| ||||  ||| |||||||| ||| ||||||||||| ||||||||| ||||| ||| |||| ||||| |||||    
T  22630428 tgtcctcgtgagattatctcagttggtagtgacaatgcataatatatgcaaggtctgaggttcaaaccccgaccacca 22630351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 23225859 - 23225908
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    ||||| |||||||||||||||||| |||| ||||| |||| |||||||||    
T  23225859 gtcctcgtgaacttaactcagttggtaggaacaattcataatatatgcaa 23225908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 183
Target Start/End: Original strand, 24540849 - 24540886
Alignment:
Q  146 ttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  24540849 ttaactcagttgatagagacaatgcataatatatgcaa 24540886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 32180824 - 32180901
Alignment:
Q  134 gtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||| |||| |||| |||||||| ||  |||||||||||  |||||||||||||||||| | || ||||| ||||||    
T  32180824 gtcctcgtgagcttagctcagttggtatagacaatgcataaaatatgcaaagtctggggttcgaaccccgaccaccac 32180901  T

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Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 39842078 - 39842033
Alignment:
Q  135 tccttgtgaacttaactcagttgatagggacaatgcatagtatatg 180  Q
    |||| |||| |||||||||||||||| |||||||||||| ||||||    
T  39842078 tcctcgtgatcttaactcagttgataaggacaatgcataatatatg 39842033  T

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Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 186
Target Start/End: Original strand, 44909829 - 44909870
Alignment:
Q  145 cttaactcagttgatagggacaatgcatagtatatgcaaagt 186  Q
    ||||||||||||| ||  ||||||||||||||||||||||||    
T  44909829 cttaactcagttggtaaagacaatgcatagtatatgcaaagt 44909870  T

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Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 186
Target Start/End: Complemental strand, 46409541 - 46409496
Alignment:
Q  141 tgaacttaactcagttgatagggacaatgcatagtatatgcaaagt 186  Q
    ||||||||||||||||| ||  ||||||||||| ||||||||||||    
T  46409541 tgaacttaactcagttggtaaagacaatgcataatatatgcaaagt 46409496  T

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Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 183
Target Start/End: Original strand, 48171871 - 48171924
Alignment:
Q  130 tgttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||||||| ||| ||||||||||||| ||| ||||||| ||| |||||||||    
T  48171871 tgttgtccttatgagcttaactcagttggtagagacaatgtataatatatgcaa 48171924  T

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Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 49953467 - 49953406
Alignment:
Q  137 cttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||| |||||||||||  ||||| |||||||||||| ||||||||| ||| ||||| ||||    
T  49953467 cttgtaaacttaactcaactgatatggacaatgcataatatatgcaaggtccggggttcaaa 49953406  T

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Target: scaffold0050 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 53446 - 53370
Alignment:
Q  135 tccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||| |||| |||||||||||||  ||||||||||||||  |||||||| ||||||||| |||| ||||| ||||||    
T  53446 tcctcgtgagcttaactcagttggaagggacaatgcataaaatatgcaaggtctggggttcaaaccccgaccaccac 53370  T

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Target: scaffold0021 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 133 - 211
Target Start/End: Original strand, 161134 - 161212
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    ||||||||||| ||||||||||||| || ||||||||||||  |||||||| ||  ||||| |||| ||||| ||||||    
T  161134 tgtccttgtgagcttaactcagttggtatggacaatgcataaaatatgcaaggttcggggttcaaaccccgaccaccac 161212  T

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Target: scaffold0038 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 31990 - 31930
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggt 193  Q
    |||||| |||| |||  |||||||||||||||||||||||| ||||||||| ||| |||||    
T  31990 tgtcctagtgagcttggctcagttgatagggacaatgcataatatatgcaaggtccggggt 31930  T

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Target: scaffold0350 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 140 - 190
Target Start/End: Original strand, 1248 - 1298
Alignment:
Q  140 gtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctgg 190  Q
    ||||||||| ||||||||||| |||||||||||| |||||| || ||||||    
T  1248 gtgaacttagctcagttgatatggacaatgcataatatatgtaaggtctgg 1298  T

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Target: scaffold0204 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 16143 - 16197
Alignment:
Q  132 ttgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagt 186  Q
    |||||| ||||||||||||||| || ||| |||||||||||| |||||| |||||    
T  16143 ttgtccatgtgaacttaactcatttaataaggacaatgcataatatatgtaaagt 16197  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 133 - 183
Target Start/End: Original strand, 119562 - 119612
Alignment:
Q  133 tgtccttgtgaacttaactcagttgatagggacaatgcatagtatatgcaa 183  Q
    |||||| |||| ||||||||||||||||||||||||| ||| ||| |||||    
T  119562 tgtcctcgtgagcttaactcagttgatagggacaatgtataatatttgcaa 119612  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 223663 - 223629
Alignment:
Q  40 atcaataaagtgtcatcagcaaactgaagatggga 74  Q
    |||| ||||||||||||||||||||||||||||||    
T  223663 atcactaaagtgtcatcagcaaactgaagatggga 223629  T

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Target: scaffold0044 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 42398 - 42337
Alignment:
Q  137 cttgtgaacttaactcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaa 198  Q
    ||||||| |||| ||||||||  | |||||||||||| ||||||||| ||||||||| ||||    
T  42398 cttgtgagcttagctcagttgggaaggacaatgcataatatatgcaaggtctggggttcaaa 42337  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 221064 - 221003
Alignment:
Q  150 ctcagttgatagggacaatgcatagtatatgcaaagtctggggtgcaaatcccgatcaccac 211  Q
    |||||||| |||||| ||| |||| |||||||||||||| |||| |||| ||||| ||||||    
T  221064 ctcagttggtagggataatacataatatatgcaaagtctagggttcaaaccccgaccaccac 221003  T

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