View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0847_high_43 (Length: 251)

Name: NF0847_high_43
Description: NF0847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0847_high_43
NF0847_high_43
[»] chr4 (81 HSPs)
chr4 (129-237)||(32528952-32529060)
chr4 (47-130)||(4896387-4896470)
chr4 (48-132)||(42915104-42915188)
chr4 (52-128)||(51296066-51296142)
chr4 (47-122)||(23690332-23690407)
chr4 (47-129)||(31275247-31275329)
chr4 (47-131)||(55927085-55927169)
chr4 (47-128)||(37249010-37249091)
chr4 (47-131)||(31658020-31658104)
chr4 (47-122)||(39844153-39844228)
chr4 (47-122)||(51389417-51389492)
chr4 (47-128)||(5234360-5234441)
chr4 (47-128)||(15596497-15596578)
chr4 (47-128)||(16004216-16004296)
chr4 (47-132)||(36408089-36408174)
chr4 (47-132)||(36413212-36413297)
chr4 (47-107)||(9162167-9162227)
chr4 (47-130)||(31240749-31240833)
chr4 (47-130)||(46173638-46173721)
chr4 (48-122)||(24772773-24772847)
chr4 (58-128)||(28480427-28480497)
chr4 (58-128)||(28481301-28481371)
chr4 (58-128)||(28482176-28482246)
chr4 (47-129)||(30778152-30778234)
chr4 (65-130)||(1033267-1033332)
chr4 (47-132)||(47998695-47998779)
chr4 (47-132)||(51717169-51717254)
chr4 (48-128)||(38844379-38844459)
chr4 (47-128)||(15515885-15515967)
chr4 (48-130)||(25523083-25523165)
chr4 (48-128)||(2613505-2613586)
chr4 (47-132)||(12638925-12639010)
chr4 (47-100)||(18874841-18874894)
chr4 (47-132)||(36512943-36513028)
chr4 (47-131)||(36792433-36792518)
chr4 (47-128)||(38952790-38952871)
chr4 (58-130)||(48372112-48372185)
chr4 (47-129)||(53091114-53091200)
chr4 (47-127)||(29384087-29384167)
chr4 (47-130)||(36444282-36444365)
chr4 (50-132)||(39241187-39241270)
chr4 (47-128)||(1580171-1580253)
chr4 (47-128)||(6953276-6953358)
chr4 (47-128)||(38160661-38160743)
chr4 (54-119)||(5123488-5123553)
chr4 (47-92)||(34974554-34974599)
chr4 (48-128)||(41609560-41609641)
chr4 (47-100)||(49194984-49195037)
chr4 (47-128)||(53583017-53583098)
chr4 (84-132)||(25476759-25476807)
chr4 (47-99)||(28676072-28676124)
chr4 (47-122)||(33860440-33860516)
chr4 (47-131)||(46567030-46567114)
chr4 (47-122)||(3286919-3286994)
chr4 (48-99)||(3475970-3476021)
chr4 (52-131)||(4577670-4577749)
chr4 (87-130)||(32408356-32408399)
chr4 (48-107)||(36122964-36123023)
chr4 (48-129)||(22257084-22257165)
chr4 (47-120)||(29577332-29577406)
chr4 (47-89)||(34027997-34028039)
chr4 (48-129)||(36364672-36364754)
chr4 (47-132)||(42510809-42510895)
chr4 (47-128)||(45678364-45678446)
chr4 (48-120)||(52636344-52636418)
chr4 (47-131)||(4878068-4878153)
chr4 (50-122)||(24019865-24019938)
chr4 (48-128)||(30042234-30042315)
chr4 (47-127)||(34116429-34116510)
chr4 (47-128)||(40409055-40409136)
chr4 (47-99)||(5208245-5208297)
chr4 (47-99)||(9032881-9032933)
chr4 (47-91)||(24337282-24337326)
chr4 (47-99)||(27001327-27001379)
chr4 (47-99)||(35580211-35580263)
chr4 (47-122)||(40847470-40847543)
chr4 (47-122)||(41952929-41953005)
chr4 (48-88)||(46912000-46912040)
chr4 (47-99)||(47106012-47106064)
chr4 (47-99)||(51377211-51377263)
chr4 (47-99)||(53781755-53781807)
[»] chr6 (31 HSPs)
chr6 (47-131)||(1897787-1897871)
chr6 (47-131)||(2582763-2582847)
chr6 (47-122)||(32457147-32457222)
chr6 (47-132)||(16336955-16337040)
chr6 (48-132)||(34021057-34021141)
chr6 (48-128)||(32853033-32853113)
chr6 (47-131)||(32253881-32253966)
chr6 (47-131)||(30906549-30906633)
chr6 (47-132)||(9954649-9954735)
chr6 (47-132)||(29383658-29383743)
chr6 (48-122)||(7303999-7304074)
chr6 (47-129)||(11785458-11785541)
chr6 (52-127)||(24752337-24752412)
chr6 (47-132)||(1803970-1804056)
chr6 (47-132)||(19713095-19713181)
chr6 (47-129)||(26378273-26378355)
chr6 (47-100)||(12044431-12044484)
chr6 (48-120)||(23653789-23653862)
chr6 (65-130)||(31517067-31517132)
chr6 (47-99)||(3660271-3660323)
chr6 (48-100)||(11742901-11742953)
chr6 (65-132)||(21857454-21857521)
chr6 (47-130)||(31480723-31480806)
chr6 (47-132)||(608545-608631)
chr6 (48-133)||(15722386-15722472)
chr6 (48-89)||(16743194-16743235)
chr6 (47-100)||(32644713-32644766)
chr6 (47-99)||(2165218-2165270)
chr6 (47-99)||(2176851-2176903)
chr6 (47-122)||(20712167-20712243)
chr6 (72-128)||(31255350-31255406)
[»] chr7 (53 HSPs)
chr7 (47-132)||(48866815-48866900)
chr7 (47-129)||(30180608-30180690)
chr7 (47-128)||(37856070-37856151)
chr7 (47-129)||(33684781-33684863)
chr7 (48-128)||(12141986-12142066)
chr7 (47-132)||(8792485-8792567)
chr7 (47-130)||(34348914-34348997)
chr7 (47-128)||(5978680-5978761)
chr7 (47-128)||(21752759-21752840)
chr7 (47-128)||(44894363-44894444)
chr7 (47-132)||(46651773-46651858)
chr7 (47-122)||(7077648-7077723)
chr7 (47-130)||(37351877-37351960)
chr7 (47-130)||(45607125-45607208)
chr7 (47-128)||(2790278-2790360)
chr7 (47-129)||(41966429-41966511)
chr7 (49-107)||(43025910-43025968)
chr7 (47-128)||(5378728-5378809)
chr7 (47-128)||(10591254-10591334)
chr7 (47-128)||(21858848-21858929)
chr7 (47-128)||(25887684-25887765)
chr7 (47-129)||(6353829-6353912)
chr7 (47-116)||(12102610-12102679)
chr7 (50-130)||(155868-155948)
chr7 (47-127)||(21839023-21839103)
chr7 (47-122)||(28110056-28110132)
chr7 (48-127)||(32315928-32316008)
chr7 (47-122)||(37392144-37392220)
chr7 (47-127)||(47193028-47193108)
chr7 (47-122)||(18157080-18157155)
chr7 (48-122)||(44185278-44185353)
chr7 (47-131)||(7807157-7807240)
chr7 (52-122)||(32933653-32933723)
chr7 (47-129)||(38995911-38995993)
chr7 (48-133)||(40693411-40693497)
chr7 (47-128)||(40717127-40717209)
chr7 (47-100)||(4678164-4678217)
chr7 (47-100)||(21588844-21588897)
chr7 (52-89)||(34304608-34304645)
chr7 (47-127)||(45432045-45432125)
chr7 (47-122)||(5198654-5198730)
chr7 (47-99)||(19510275-19510327)
chr7 (48-132)||(25940552-25940636)
chr7 (47-91)||(39875735-39875779)
chr7 (47-122)||(40077356-40077432)
chr7 (55-131)||(43445516-43445592)
chr7 (48-100)||(41254878-41254927)
chr7 (47-81)||(42204662-42204696)
chr7 (47-130)||(43260090-43260175)
chr7 (47-122)||(2414164-2414237)
chr7 (47-99)||(29034186-29034238)
chr7 (47-99)||(42431824-42431876)
chr7 (47-122)||(46148267-46148343)
[»] chr5 (60 HSPs)
chr5 (47-122)||(28811529-28811604)
chr5 (47-132)||(2117525-2117610)
chr5 (47-128)||(39595375-39595456)
chr5 (47-130)||(20719902-20719985)
chr5 (48-129)||(11306798-11306879)
chr5 (47-131)||(33567125-33567209)
chr5 (48-127)||(125194-125273)
chr5 (47-121)||(34767313-34767387)
chr5 (47-122)||(4834924-4834999)
chr5 (47-129)||(19376020-19376102)
chr5 (47-132)||(19127225-19127310)
chr5 (47-130)||(5130264-5130348)
chr5 (47-134)||(12718263-12718350)
chr5 (47-134)||(33243624-33243711)
chr5 (47-122)||(34381113-34381188)
chr5 (47-129)||(40566104-40566187)
chr5 (47-129)||(27392590-27392672)
chr5 (47-131)||(91316-91400)
chr5 (53-128)||(10232606-10232682)
chr5 (47-134)||(12779489-12779576)
chr5 (48-122)||(23991333-23991408)
chr5 (47-122)||(31284289-31284364)
chr5 (47-97)||(11666280-11666330)
chr5 (53-122)||(12661841-12661911)
chr5 (58-128)||(24431507-24431577)
chr5 (47-122)||(26627431-26627506)
chr5 (74-132)||(9403641-9403699)
chr5 (47-128)||(9714024-9714106)
chr5 (47-132)||(17574108-17574194)
chr5 (48-122)||(19437359-19437433)
chr5 (47-120)||(41460217-41460291)
chr5 (67-121)||(43482486-43482540)
chr5 (47-131)||(8959261-8959346)
chr5 (47-100)||(11464040-11464093)
chr5 (47-131)||(13613849-13613934)
chr5 (47-100)||(17063966-17064019)
chr5 (47-131)||(21749459-21749544)
chr5 (47-132)||(26626704-26626789)
chr5 (47-122)||(3960063-3960139)
chr5 (58-130)||(11767877-11767949)
chr5 (47-99)||(39458742-39458794)
chr5 (48-100)||(41210431-41210483)
chr5 (47-122)||(9636053-9636128)
chr5 (48-122)||(29803325-29803400)
chr5 (47-129)||(14323856-14323938)
chr5 (47-129)||(17990315-17990397)
chr5 (47-88)||(471915-471956)
chr5 (52-128)||(3141602-3141678)
chr5 (47-120)||(6865684-6865757)
chr5 (49-122)||(7144678-7144751)
chr5 (47-127)||(12612906-12612987)
chr5 (47-131)||(17489449-17489534)
chr5 (47-88)||(42909820-42909861)
chr5 (87-127)||(12349926-12349966)
chr5 (47-99)||(12401293-12401345)
chr5 (47-99)||(15622145-15622197)
chr5 (53-133)||(24792559-24792639)
chr5 (47-99)||(28501718-28501770)
chr5 (47-99)||(33823612-33823664)
chr5 (84-131)||(43214085-43214133)
[»] chr8 (65 HSPs)
chr8 (47-129)||(37524316-37524398)
chr8 (47-128)||(5359439-5359520)
chr8 (47-131)||(23258133-23258217)
chr8 (47-128)||(7678833-7678914)
chr8 (74-133)||(26294304-26294363)
chr8 (74-133)||(26307561-26307620)
chr8 (47-132)||(41344554-41344639)
chr8 (47-122)||(38128421-38128496)
chr8 (47-130)||(40413250-40413333)
chr8 (48-129)||(21273598-21273679)
chr8 (47-99)||(22767231-22767283)
chr8 (48-131)||(295648-295731)
chr8 (47-122)||(28927782-28927857)
chr8 (47-122)||(44672128-44672203)
chr8 (47-100)||(426202-426255)
chr8 (47-130)||(3989006-3989089)
chr8 (47-118)||(22852738-22852809)
chr8 (48-119)||(24503019-24503090)
chr8 (48-106)||(896009-896067)
chr8 (47-113)||(26871145-26871211)
chr8 (47-121)||(28473441-28473515)
chr8 (47-128)||(37101574-37101656)
chr8 (47-130)||(30925541-30925624)
chr8 (47-130)||(42543367-42543451)
chr8 (47-122)||(42689886-42689959)
chr8 (47-129)||(10344429-10344512)
chr8 (47-129)||(11223747-11223829)
chr8 (47-118)||(16011816-16011887)
chr8 (47-132)||(34474050-34474137)
chr8 (47-129)||(1179477-1179559)
chr8 (47-129)||(9738581-9738663)
chr8 (49-122)||(18538480-18538554)
chr8 (47-132)||(41776276-41776362)
chr8 (48-105)||(34247876-34247933)
chr8 (47-128)||(40102124-40102205)
chr8 (47-132)||(42443207-42443292)
chr8 (47-122)||(1422596-1422672)
chr8 (47-132)||(5502461-5502548)
chr8 (47-122)||(9000908-9000984)
chr8 (50-129)||(14029130-14029210)
chr8 (47-99)||(30578355-30578407)
chr8 (47-122)||(33817258-33817334)
chr8 (47-122)||(38844685-38844761)
chr8 (48-131)||(154392-154475)
chr8 (47-122)||(1796584-1796659)
chr8 (50-128)||(21648819-21648898)
chr8 (52-91)||(26507829-26507868)
chr8 (48-91)||(42047437-42047480)
chr8 (83-130)||(43403921-43403968)
chr8 (47-129)||(45101497-45101579)
chr8 (48-128)||(3206351-3206432)
chr8 (47-122)||(24946103-24946175)
chr8 (53-98)||(27836287-27836332)
chr8 (47-88)||(42996563-42996604)
chr8 (47-99)||(2597078-2597130)
chr8 (48-127)||(9305886-9305966)
chr8 (47-122)||(9963787-9963862)
chr8 (66-122)||(12668752-12668808)
chr8 (47-122)||(14548719-14548795)
chr8 (67-122)||(20284828-20284884)
chr8 (67-122)||(21071457-21071513)
chr8 (47-99)||(30927849-30927901)
chr8 (47-130)||(37471744-37471828)
chr8 (47-122)||(38174143-38174219)
chr8 (48-131)||(42651022-42651106)
[»] chr3 (74 HSPs)
chr3 (47-129)||(47849771-47849853)
chr3 (47-133)||(11173551-11173637)
chr3 (47-128)||(29706004-29706085)
chr3 (47-132)||(52727333-52727418)
chr3 (47-130)||(20380776-20380859)
chr3 (47-130)||(46473229-46473312)
chr3 (47-128)||(34733183-34733263)
chr3 (47-122)||(19418055-19418130)
chr3 (47-129)||(7231894-7231976)
chr3 (47-129)||(41111960-41112042)
chr3 (47-130)||(32687846-32687930)
chr3 (47-122)||(49130955-49131030)
chr3 (47-130)||(34271373-34271458)
chr3 (47-119)||(37215129-37215201)
chr3 (48-130)||(37303485-37303567)
chr3 (47-128)||(41957614-41957695)
chr3 (47-99)||(5188337-5188389)
chr3 (47-134)||(6126555-6126643)
chr3 (47-119)||(28269907-28269979)
chr3 (48-128)||(28300535-28300615)
chr3 (47-122)||(44127086-44127162)
chr3 (47-128)||(33007461-33007543)
chr3 (47-128)||(35272128-35272210)
chr3 (53-122)||(53715422-53715492)
chr3 (48-133)||(55344179-55344265)
chr3 (47-100)||(27198071-27198124)
chr3 (47-128)||(37302963-37303044)
chr3 (55-128)||(46315844-46315917)
chr3 (47-128)||(32457642-32457725)
chr3 (47-122)||(36869731-36869807)
chr3 (47-119)||(39604144-39604216)
chr3 (65-131)||(31997921-31997988)
chr3 (47-133)||(42475861-42475947)
chr3 (47-89)||(49457666-49457708)
chr3 (47-129)||(51672964-51673046)
chr3 (47-132)||(25959427-25959512)
chr3 (47-100)||(35376468-35376521)
chr3 (47-100)||(47276386-47276439)
chr3 (48-131)||(21481866-21481949)
chr3 (47-122)||(31249216-31249292)
chr3 (47-122)||(32931812-32931888)
chr3 (47-122)||(34627969-34628045)
chr3 (47-122)||(40785593-40785669)
chr3 (47-129)||(43169642-43169723)
chr3 (47-130)||(48117437-48117521)
chr3 (47-131)||(51650455-51650542)
chr3 (50-129)||(7293987-7294066)
chr3 (47-122)||(9027974-9028049)
chr3 (48-99)||(26021977-26022028)
chr3 (47-133)||(44365175-44365262)
chr3 (47-122)||(48945948-48946023)
chr3 (48-122)||(1295434-1295508)
chr3 (47-89)||(36799499-36799541)
chr3 (47-89)||(43409293-43409335)
chr3 (83-129)||(46953086-46953132)
chr3 (47-120)||(51385336-51385410)
chr3 (47-128)||(54233389-54233471)
chr3 (47-131)||(108532-108615)
chr3 (47-120)||(1901823-1901896)
chr3 (47-120)||(1911269-1911342)
chr3 (47-131)||(9027714-9027799)
chr3 (47-88)||(14207476-14207517)
chr3 (47-88)||(14215224-14215265)
chr3 (47-127)||(14957937-14958018)
chr3 (47-100)||(20216049-20216102)
chr3 (48-101)||(23553507-23553559)
chr3 (47-99)||(41877528-41877581)
chr3 (83-132)||(51973393-51973442)
chr3 (47-99)||(8066456-8066507)
chr3 (47-99)||(9158954-9159006)
chr3 (47-99)||(13159762-13159814)
chr3 (47-99)||(36819057-36819109)
chr3 (47-122)||(42102338-42102414)
chr3 (47-99)||(44593067-44593119)
[»] chr2 (69 HSPs)
chr2 (47-128)||(29795537-29795618)
chr2 (47-129)||(39454135-39454217)
chr2 (47-131)||(3091842-3091926)
chr2 (47-122)||(6365287-6365362)
chr2 (47-128)||(34442214-34442295)
chr2 (47-122)||(11164271-11164346)
chr2 (47-122)||(36435782-36435857)
chr2 (47-131)||(13711162-13711246)
chr2 (47-131)||(22390253-22390337)
chr2 (47-131)||(36133075-36133159)
chr2 (48-128)||(14714088-14714168)
chr2 (47-122)||(12600149-12600224)
chr2 (47-122)||(25801706-25801781)
chr2 (48-129)||(2013173-2013254)
chr2 (47-128)||(14140228-14140309)
chr2 (48-128)||(23344878-23344958)
chr2 (47-131)||(32750099-32750183)
chr2 (47-131)||(36376737-36376821)
chr2 (47-122)||(37631261-37631337)
chr2 (47-130)||(13104580-13104663)
chr2 (47-130)||(42251807-42251890)
chr2 (47-131)||(8555177-8555262)
chr2 (47-128)||(11229210-11229291)
chr2 (48-129)||(42081139-42081220)
chr2 (48-132)||(44189929-44190011)
chr2 (47-134)||(43650430-43650517)
chr2 (47-122)||(43725306-43725381)
chr2 (47-113)||(39285954-39286020)
chr2 (48-129)||(7086012-7086093)
chr2 (47-132)||(31296728-31296813)
chr2 (47-91)||(1889248-1889292)
chr2 (47-130)||(34249681-34249765)
chr2 (47-129)||(19913885-19913968)
chr2 (48-130)||(44059609-44059692)
chr2 (47-129)||(45515487-45515569)
chr2 (47-129)||(12962487-12962569)
chr2 (54-132)||(23045269-23045347)
chr2 (49-122)||(36763414-36763488)
chr2 (48-132)||(43791675-43791760)
chr2 (47-122)||(1574554-1574630)
chr2 (83-131)||(2464274-2464322)
chr2 (47-122)||(3959997-3960073)
chr2 (47-122)||(19668082-19668157)
chr2 (47-122)||(30856908-30856983)
chr2 (47-97)||(694370-694420)
chr2 (47-97)||(6639392-6639442)
chr2 (48-129)||(33295975-33296056)
chr2 (47-132)||(35007985-35008071)
chr2 (48-129)||(35518377-35518459)
chr2 (47-100)||(4263781-4263834)
chr2 (47-128)||(5067531-5067611)
chr2 (47-120)||(5455350-5455423)
chr2 (47-99)||(12066010-12066063)
chr2 (48-120)||(18949108-18949180)
chr2 (47-128)||(19695581-19695661)
chr2 (47-128)||(23880196-23880277)
chr2 (47-100)||(36383563-36383616)
chr2 (47-128)||(36909732-36909813)
chr2 (52-132)||(7121468-7121548)
chr2 (47-130)||(11828706-11828790)
chr2 (47-99)||(13881196-13881248)
chr2 (47-99)||(14021321-14021373)
chr2 (47-99)||(23048001-23048053)
chr2 (48-96)||(25997651-25997699)
chr2 (47-99)||(27307163-27307215)
chr2 (47-130)||(35705803-35705887)
chr2 (47-122)||(36582357-36582433)
chr2 (47-99)||(37966457-37966509)
chr2 (47-130)||(45202018-45202102)
[»] scaffold0057 (1 HSPs)
scaffold0057 (47-128)||(38980-39061)
[»] scaffold0026 (1 HSPs)
scaffold0026 (49-129)||(113728-113808)
[»] chr1 (70 HSPs)
chr1 (47-128)||(40610330-40610411)
chr1 (47-129)||(46948080-46948162)
chr1 (47-132)||(22389411-22389495)
chr1 (48-131)||(49453582-49453662)
chr1 (47-130)||(50659079-50659162)
chr1 (47-129)||(39010915-39010997)
chr1 (47-107)||(5477073-5477133)
chr1 (47-122)||(32966368-32966444)
chr1 (47-118)||(36418180-36418251)
chr1 (47-129)||(30631733-30631815)
chr1 (47-122)||(21255679-21255755)
chr1 (47-119)||(28253116-28253188)
chr1 (47-122)||(43640881-43640957)
chr1 (47-119)||(50141833-50141905)
chr1 (53-128)||(2362476-2362551)
chr1 (48-131)||(15466849-15466932)
chr1 (47-122)||(31290103-31290178)
chr1 (47-130)||(45740431-45740514)
chr1 (47-128)||(7645443-7645522)
chr1 (47-128)||(31480023-31480105)
chr1 (47-131)||(14002627-14002712)
chr1 (47-100)||(16836031-16836084)
chr1 (47-120)||(35846216-35846289)
chr1 (47-128)||(36690461-36690542)
chr1 (47-128)||(36706562-36706643)
chr1 (47-131)||(366758-366842)
chr1 (47-122)||(16987548-16987624)
chr1 (47-122)||(4604630-4604705)
chr1 (47-130)||(31427844-31427927)
chr1 (47-122)||(34187365-34187440)
chr1 (47-132)||(37843320-37843402)
chr1 (47-122)||(40595949-40596024)
chr1 (47-122)||(48872480-48872555)
chr1 (47-122)||(50061871-50061946)
chr1 (47-122)||(51339595-51339670)
chr1 (52-122)||(51571534-51571602)
chr1 (47-133)||(27352731-27352817)
chr1 (47-132)||(36930641-36930726)
chr1 (58-107)||(37690527-37690576)
chr1 (74-131)||(43755572-43755629)
chr1 (47-122)||(587000-587076)
chr1 (47-122)||(25130804-25130880)
chr1 (47-122)||(37947114-37947190)
chr1 (47-122)||(47059784-47059860)
chr1 (47-122)||(11460895-11460970)
chr1 (47-122)||(25061834-25061909)
chr1 (48-122)||(25302539-25302614)
chr1 (47-122)||(29264104-29264179)
chr1 (48-107)||(50436247-50436305)
chr1 (49-122)||(29253960-29254034)
chr1 (53-122)||(29294055-29294122)
chr1 (74-128)||(33676029-33676083)
chr1 (53-122)||(40605315-40605385)
chr1 (47-89)||(48325323-48325365)
chr1 (47-89)||(50527985-50528027)
chr1 (47-128)||(6841892-6841973)
chr1 (48-129)||(7423116-7423197)
chr1 (47-100)||(13813659-13813712)
chr1 (47-130)||(18959104-18959189)
chr1 (65-122)||(29300496-29300553)
chr1 (49-122)||(44730747-44730820)
chr1 (50-134)||(48872834-48872918)
chr1 (47-91)||(10384629-10384673)
chr1 (47-130)||(15061946-15062030)
chr1 (48-128)||(18610872-18610952)
chr1 (47-99)||(25995561-25995613)
chr1 (47-130)||(31436921-31437002)
chr1 (47-99)||(45042362-45042413)
chr1 (47-129)||(49425838-49425919)
chr1 (47-127)||(51703002-51703081)
[»] scaffold0076 (1 HSPs)
scaffold0076 (47-107)||(11293-11353)
[»] scaffold0036 (1 HSPs)
scaffold0036 (47-130)||(18105-18187)
[»] scaffold0115 (1 HSPs)
scaffold0115 (47-130)||(15076-15158)
[»] scaffold0508 (1 HSPs)
scaffold0508 (47-132)||(11421-11506)
[»] scaffold0002 (2 HSPs)
scaffold0002 (48-121)||(6529-6602)
scaffold0002 (47-99)||(147174-147226)
[»] scaffold0501 (1 HSPs)
scaffold0501 (47-119)||(10414-10486)
[»] scaffold0018 (1 HSPs)
scaffold0018 (47-130)||(36100-36186)
[»] scaffold0009 (1 HSPs)
scaffold0009 (47-122)||(190780-190855)
[»] scaffold0154 (1 HSPs)
scaffold0154 (48-98)||(9767-9817)
[»] scaffold0011 (1 HSPs)
scaffold0011 (47-128)||(219552-219634)
[»] scaffold0054 (1 HSPs)
scaffold0054 (47-100)||(31517-31570)
[»] scaffold0003 (1 HSPs)
scaffold0003 (48-132)||(119935-120019)
[»] scaffold0184 (1 HSPs)
scaffold0184 (47-122)||(16489-16564)
[»] scaffold0078 (1 HSPs)
scaffold0078 (47-122)||(56280-56355)
[»] scaffold0286 (1 HSPs)
scaffold0286 (47-99)||(17139-17191)
[»] scaffold0166 (1 HSPs)
scaffold0166 (53-133)||(34942-35022)
[»] scaffold0148 (1 HSPs)
scaffold0148 (48-128)||(9553-9633)


Alignment Details
Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 32529060 - 32528952
Alignment:
Q  129 ttttatgtttggttgatttacaaattcatattatcatatagatagacataaatattgtgtgaataaataatgtttaaatgtcaagcagcatacagatctt 228  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32529060 ttttatgtttggttgatttacaaattcatattatcatatagatagacataaatattgtgtgaataaataatgtttaaatgtcaagcagcatacagatctt 32528961  T
Q  229 gcaccctaa 237  Q
    |||||||||    
T  32528960 gcaccctaa 32528952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 4896470 - 4896387
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  4896470 cattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactctt 4896387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 42915188 - 42915104
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  42915188 attgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactctttt 42915104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 52 - 128
Target Start/End: Complemental strand, 51296142 - 51296066
Alignment:
Q  52 tttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||| |  ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  51296142 tttttgaccaatagaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 51296066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 23690332 - 23690407
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||| |||||||||| |||||||||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  23690332 cattatttttgaccaatgaaaagagagaaaaaagatattgtcacaaaaattgtttcaaatagatgttcaaatatca 23690407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 31275247 - 31275329
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||||||||| |||||| | ||||||||||||| ||||||    
T  31275247 cattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactct 31275329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 55927085 - 55927169
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| |||||||||||| ||||||  ||||||||||| |||| |||||| ||||||||||||||| ||||||||    
T  55927085 cattgtttttgaccaatgaaaagagagagaaaagaaattgtcacaaaaattgtctcaaatggatgttcaaatatcactactcttt 55927169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 37249010 - 37249091
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| ||||||| || | |||| |||||||||||||||| || ||||||||||||||||||||||||||||||||| |||||    
T  37249010 cattatttttgagcaataaaaatagagaaaaaagaggttatctcaaaagttgtttcaaatagatgttcaaatatcattactc 37249091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 31658020 - 31658104
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||||| ||| |||||| | ||||||||||||  ||||||||    
T  31658020 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagctgtatcaaatggttgttcaaatatcgctactcttt 31658104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 39844228 - 39844153
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | ||||||||||||||||| ||||| | ||||||||| |||| |||||||||||||||||    
T  39844228 cattgtttttgaccaataaaaagagagaaaaaagaagttgttaaaaaagttgtctcaattagatgttcaaatatca 39844153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 51389417 - 51389492
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| || | ||||||||||||||||||| ||||||||||||||||| |||||| | |||||||||||||    
T  51389417 cattgttttttactaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatca 51389492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 5234441 - 5234360
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| | ||||||||||||||| |  |||||||||||||||| |||||| | ||||||||||||| |||||    
T  5234441 cattgtttttgaccaataaaaagagagaaaaaaaaaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 5234360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 15596497 - 15596578
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||| ||||| ||||||  ||||||||||| ||||||||||||||||||| |||| | ||||||||||||| |||||    
T  15596497 cattgttttggaccaatgaaaaatgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactc 15596578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 16004296 - 16004216
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| |||||||||| ||||||||||||||||| || ||||||||| |||||| |||||| ||||||||||||||| |||||    
T  16004296 cattatttttgaccaatgaaaagagagaaaaaaaag-ttgtcacaagagttgtctcaaatggatgttcaaatatcactactc 16004216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 36408174 - 36408089
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||| || | |||||||||| ||||||||  |||||||||||||||| |||||||| |||||||||||||  ||||||||    
T  36408174 cattgtttttaactaatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatagttgttcaaatatcaccactctttt 36408089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 36413297 - 36413212
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||| || | |||||||||| ||||||||  |||||||||||||||| |||||||| |||||||||||||  ||||||||    
T  36413297 cattgtttttaactaatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatagttgttcaaatatcaccactctttt 36413212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 9162167 - 9162227
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 107  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||| |||| |||||||    
T  9162167 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtatcaaata 9162227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 31240749 - 31240833
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||| |||| ||||||||||||||||||| ||||||| |||||||||| | |||| | ||||||||||||| |||||||    
T  31240749 cattgtttttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactctt 31240833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 46173638 - 46173721
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||| |||| |||||||||| ||||||||  |||||||||||||||| |||||| | | ||||||||||| |||||||    
T  46173638 cattgttttttaccaatgaaaagagaaaaaaaagaaattgtcacaaaagttgtatcaaatggttattcaaatatcattactctt 46173721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 24772773 - 24772847
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||||||| | |||||||||| ||||||  ||||||||| |||||| |||||| |||||||||||||||    
T  24772773 attgtttttgaccaataaaaagagagagaaaagaaattgtcacaagagttgtctcaaatggatgttcaaatatca 24772847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 28480497 - 28480427
Alignment:
Q  58 accattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| |||||||||||| |||||| |||||||||| |||||| |||||||| ||||||||||||| |||||    
T  28480497 accaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28480427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 28481371 - 28481301
Alignment:
Q  58 accattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| |||||||||||| |||||| |||||||||| |||||| |||||||| ||||||||||||| |||||    
T  28481371 accaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28481301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 28482246 - 28482176
Alignment:
Q  58 accattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| |||||||||||| |||||| |||||||||| |||||| |||||||| ||||||||||||| |||||    
T  28482246 accaatgaaaagagagagaaaagaagttgtcacaatagttgtctcaaatagttgttcaaatatcactactc 28482176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 30778234 - 30778152
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||| |||| | |||||||||||||||||  |||||| ||||||| | |||||||| ||||||||||||| ||||||    
T  30778234 cattgtttttaaccaataaaaagagagaaaaaagaaattgtcataaaagttatatcaaatagttgttcaaatatcattactct 30778152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 130
Target Start/End: Original strand, 1033267 - 1033332
Alignment:
Q  65 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||| |||||||||||| ||||||||||||||||||| |||| | ||||||||||||| |||||||    
T  1033267 aaaaaagagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactctt 1033332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 47998695 - 47998779
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| |||||||| |||||||| || || ||||||||||||| ||||||   ||||||||||||| |||||||||    
T  47998695 cattgtttttgaccaatgaaaagaaagaaaaaaaag-ttatcacaaaagttgtatcaaatgattgttcaaatatcactactctttt 47998779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 51717254 - 51717169
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||| ||||||||| |||||||||||||||||||  |||||||| ||||||| ||| ||   ||||||||||||| |||||||||    
T  51717254 cattgattttgaccaatgaaaagagagaaaaaagaaattgtcacataagttgtctcatatgattgttcaaatatcactactctttt 51717169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 38844459 - 38844379
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||||| |||||||||||| |||| | ||||||||||||||||| ||| || | |||||||||| || |||||    
T  38844459 attgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacattactc 38844379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 15515885 - 15515967
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttg-tttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| | ||||| ||||||||  |||||||||  ||||||| ||||||||||||||||| |||||| |||||    
T  15515885 cattgtttttgaccaataaaaagtgagaaaaacaaggttgtcatcaaagttgttttcaaatagatgttcatatatcactactc 15515967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 25523165 - 25523083
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||||||| |||||||||||| |||| | ||| ||||||||||||| ||| || | |||||||||| || |||||||    
T  25523165 attgtttttgaccaatgaaaagagagagaaaataagttatcacaaaagttgtctcatatggttgttcaaataacactactctt 25523083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 2613586 - 2613505
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||||| | |||||||||| |||  || ||||||||||||||||| |||||| | ||||||||||||| |||||    
T  2613586 attgtttttgaccaattaaaagagagagaaagtagattgtcacaaaagttgttatcaaatggttgttcaaatatcattactc 2613505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 12638925 - 12639010
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| |||||||||||||||   ||||||||| | | |||||  ||||||| ||||||||||||| | |||||||    
T  12638925 cattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaacaaatagttgttcaaatatcatttctctttt 12639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 18874894 - 18874841
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||    
T  18874894 cattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgtt 18874841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 36512943 - 36513028
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||| |||| | |||||||||| |||||| |||||||||| | |||| |||||| ||| ||||||||||| | |||||||    
T  36512943 cattgttttttaccaataaaaagagagagaaaagaagttgtcacaagaattgtctcaaatggattttcaaatatcattgctctttt 36513028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 36792433 - 36792518
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||| ||||| |||| |||||||||||| |||||| ||||||| |||||||||| | |||| | ||||||||||||| ||||||||    
T  36792433 cattatttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactcttt 36792518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 38952790 - 38952871
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||| ||||||||||||  || |||||||| |||| |||||||  |||| |||||||| |||||    
T  38952790 cattgtttttgaccaatgaaaaaagagaaaaaagaaattatcacaaaaattgtatcaaataattgtttaaatatcactactc 38952871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 48372185 - 48372112
Alignment:
Q  58 accattgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||| ||||||||||||||||||| |||||||| |||| |||| | |||||| ||||||||||||| |||||||    
T  48372185 accaatgaaaagagagaaaaaagaagttgtcactaaaaattgtatgaaatagttgttcaaatatcactactctt 48372112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 53091200 - 53091114
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaataga----tgttcaaatatcaatactct 129  Q
    ||||||||||||||| | |||  |||||||||||| ||||||||||||||||| |||||| ||    ||||||||||||| ||||||    
T  53091200 cattgtttttgaccaataaaagaagagaaaaaagaagttgtcacaaaagttgtatcaaatggatggttgttcaaatatcactactct 53091114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 29384167 - 29384087
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatact 127  Q
    ||||||||||||||| |||||| |||||||| ||| |||||||||| |||||| ||| ||   ||||||||||||| ||||    
T  29384167 cattgtttttgaccaatgaaaaaagagaaaatagaagttgtcacaagagttgtatcatatgattgttcaaatatcactact 29384087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 36444365 - 36444282
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| |||||| |||||||| ||| |||||||||| | |||| ||| ||   ||||||||||||| |||||||    
T  36444365 cattgtttttgaccaatgaaaaaagagaaaatagaagttgtcacaagaattgtatcatatgattgttcaaatatcactactctt 36444282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 132
Target Start/End: Complemental strand, 39241270 - 39241187
Alignment:
Q  50 tgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||| |||| |||||||||||| |||| | ||||||| |||||||||| |||||| | |||| |||||||| |||||||||    
T  39241270 tgtttttaaccaatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactctttt 39241187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 1580253 - 1580171
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||  ||| ||||||||||||||||| | |||||||| ||||||||| | |||| | ||||||||||||| |||||    
T  1580253 cattgtttttatccaatgaaaagagagaaaaaaaaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactc 1580171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 6953358 - 6953276
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||| |||| |||||||||||| |||||| ||||||| ||||||||||   |||| | ||||||||||||| |||||    
T  6953358 cattgtttttaaccaatgaaaagagagagaaaagaagttgtcaccaaaagttgtaagaaatggttgttcaaatatcactactc 6953276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 38160743 - 38160661
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatcaatactc 128  Q
    ||||||||||||| | |||||| |||||||||| | ||||||||| ||||||| | |||| || ||||||||||||| |||||    
T  38160743 cattgtttttgactaatgaaaaaagagaaaaaataagttgtcacataagttgtctaaaatgagttgttcaaatatcactactc 38160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 119
Target Start/End: Complemental strand, 5123553 - 5123488
Alignment:
Q  54 tttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 119  Q
    |||||||| | ||||||||||||||| | ||||||||||||||||| ||| || | ||||||||||    
T  5123553 tttgaccaattaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 5123488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 34974554 - 34974599
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaa 92  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||    
T  34974554 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaa 34974599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 41609641 - 41609560
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||||| | ||||||||||||||  || ||||||||||| ||||  |||||| | ||||||||||||| |||||    
T  41609641 attgtttttgaccaattaaaagagagaaaaagtagattgtcacaaaaattgtcatcaaatggttgttcaaatatcattactc 41609560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 49194984 - 49195037
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| | |||||||||| |||||| ||||||||| ||||||||    
T  49194984 cattgtttttgaccaataaaaagagagagaaaagaagttgtcacataagttgtt 49195037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 53583098 - 53583017
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| | |||| ||||| |||| | ||||||||||||||||| ||| || | |||||||||| || |||||    
T  53583098 cattgtttttgaccaattaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacagtactc 53583017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 25476759 - 25476807
Alignment:
Q  84 ttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||| ||||||| |||||| ||||||||||||||| |||||||||    
T  25476759 ttgtcacagaagttgtctcaaatggatgttcaaatatcattactctttt 25476807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 28676124 - 28676072
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||||||||  ||||||||| ||| |||||    
T  28676124 cattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaaaaggttgt 28676072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 33860516 - 33860440
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | | |||||||||||| ||||||||||  |||||||||  ||||| | |||||||||||||    
T  33860516 cattgtttttgaccaataataagagagaaaaatgaggttgtcatcaaagttgttagcaaatggttgttcaaatatca 33860440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 46567030 - 46567114
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| |||||||||||||||   ||||||||| | | |||||  ||||| | ||||||||||||| | ||||||    
T  46567030 cattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctcttt 46567114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 3286919 - 3286994
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| ||||||  ||||||||| |  |||||||||||||||| | |||| | |||||||||||||    
T  3286919 cattgtttttaaccaatgaaaaaggagaaaaaataaattgtcacaaaagttgtgtgaaatggttgttcaaatatca 3286994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Original strand, 3475970 - 3476021
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    |||||||||||||| |||||||| |||||||  ||||||||||||| |||||    
T  3475970 attgtttttgaccaatgaaaagaaagaaaaataaggttgtcacaaatgttgt 3476021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 4577670 - 4577749
Alignment:
Q  52 tttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||| |||| ||||||||||| | ||  |||||||| ||||||||||  |||| || ||||||||||||| ||||||||    
T  4577670 ttttttaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaagttgttcaaatatcattactcttt 4577749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 32408399 - 32408356
Alignment:
Q  87 tcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  32408399 tcacaaaagttatttcaaattgatgttcaaatatcactactctt 32408356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 107
Target Start/End: Complemental strand, 36123023 - 36122964
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 107  Q
    |||||||||||||| | |||| |||||||||||| |||||||||  |||||||| |||||    
T  36123023 attgtttttgaccaatcaaaatagagaaaaaagaagttgtcacatcagttgtttaaaata 36122964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 22257165 - 22257084
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||| |||| |||||||||||| |||| || ||||||| ||||||||| | |||| | ||||||||||||| ||||||    
T  22257165 attgtttttaaccaatgaaaagagagagaaaaaag-ttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactct 22257084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 29577406 - 29577332
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaa-tagatgttcaaatat 120  Q
    ||||||||||||||| ||||||||||||| ||  |||||||| ||||| ||||   ||| |||||||||||||||    
T  29577406 cattgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaaattgtacaaaagtagatgttcaaatat 29577332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 34027997 - 34028039
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca 89  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||    
T  34027997 cattgtttttgaccaatgagaagagagaaaaaggaggttgtca 34028039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 36364754 - 36364672
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||||||| | | ||||||||||| | ||| |||||||||||||||  |||||  | ||||||||||||| ||||||    
T  36364754 attgtttttgaccaataagaagagagaaaagataggctgtcacaaaagttgtcatcaaaaggttgttcaaatatcattactct 36364672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 42510895 - 42510809
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||| | |||||| ||||||||| ||||| ||||  |||||||||  ||||| | ||||||||||||| | |||||||    
T  42510895 cattgtttttgacaaatgaaaatagagaaaaaggaggtcgtcatcaaagttgttagcaaatggttgttcaaatatcattgctctttt 42510809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 45678364 - 45678446
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| | ||||||||||| ||  |||||||  ||||||||||  | |||||| ||||||||||||| |||||    
T  45678364 cattgtttttgaccaataaaaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactc 45678446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 52636344 - 52636418
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaa-gaggttgtcacaaaagttgtt-tcaaatagatgttcaaatat 120  Q
    |||||||||||||| ||| |||||||||||||  |||||||||||||| ||||| ||||||   |||||||||||    
T  52636344 attgtttttgaccaatgacaagagagaaaaaacaaggttgtcacaaaatttgttatcaaatgattgttcaaatat 52636418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 4878068 - 4878153
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| ||||||||||| | ||  |||||||| ||||||||||  | ||| || ||||||||||||| | ||||||    
T  4878068 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattgctcttt 4878153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 122
Target Start/End: Complemental strand, 24019938 - 24019865
Alignment:
Q  50 tgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatca 122  Q
    |||||||||||| | |||||||||| |||  |||||||||| ||||||||  | |||||||||| |||||||||    
T  24019938 tgtttttgaccaatcaaaagagagagaaacaaggttgtcaccaaagttgtcattaaatagatgtacaaatatca 24019865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 30042234 - 30042315
Alignment:
Q  48 attgtttttgaccattgaaaagagag-aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||||| |||||  |||| |||||| | ||| ||| ||||||||| | |||||| ||||||||||||| |||||    
T  30042234 attgtttttgaccaatgaaattagaggaaaaaaaaagttatcataaaagttgtatgaaatagttgttcaaatatcattactc 30042315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 34116510 - 34116429
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatcaatact 127  Q
    |||||||||||| |  ||||||||||||||||| | ||||||||| || |||| | |||| || ||||||||||||| ||||    
T  34116510 cattgtttttgatcgatgaaaagagagaaaaaaaaagttgtcacataaattgtctaaaatgagttgttcaaatatcactact 34116429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 40409136 - 40409055
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| ||||||| || | ||||| ||||||||||| |||||  |||||||||  | |||||| ||||||||||||| |||||    
T  40409136 cattatttttgatcaataaaaagtgagaaaaaagaagttgtaccaaaagttggctaaaatagttgttcaaatatcactactc 40409055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 5208297 - 5208245
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  5208297 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 5208245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 9032881 - 9032933
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | |||| |||||||||  |||||||||| ||||||||    
T  9032881 cattgtttttgaccaataaaaaaagagaaaaacaaggttgtcactaaagttgt 9032933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 24337326 - 24337282
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcaca 91  Q
    |||| |||||||||| ||||||||||||||||||| | |||||||    
T  24337326 cattttttttgaccaatgaaaagagagaaaaaagaagctgtcaca 24337282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 27001379 - 27001327
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  27001379 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 27001327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 35580211 - 35580263
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    |||| |||||||||| ||||||||||| ||||| | ||||||||| |||||||    
T  35580211 cattatttttgaccaatgaaaagagaggaaaaaaaagttgtcacataagttgt 35580263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 40847470 - 40847543
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| |||||||||| ||| |||  ||||||| ||| ||||| |||||| | |||||||||||||    
T  40847470 cattgttttttaccaatgaaaagagaaaaagaag--gttgtcaaaaaggttgtgtcaaatggttgttcaaatatca 40847543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 41952929 - 41953005
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| | || ||||||||||||||||| | ||||||| |||||||| | | |||| | |||||||||||||    
T  41952929 cattgtttttaatcaatgaaaagagagaaaaaaaaagttgtcaccaaaagttatatgaaatggttgttcaaatatca 41953005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 88
Target Start/End: Original strand, 46912000 - 46912040
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtc 88  Q
    |||||||||||||| ||||||||||||||||| | ||||||    
T  46912000 attgtttttgaccaatgaaaagagagaaaaaataagttgtc 46912040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 47106012 - 47106064
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  47106012 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 47106064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 51377263 - 51377211
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  51377263 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 51377211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 53781807 - 53781755
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||| | ||  |||||||| ||||||||||    
T  53781807 cattgtttttgaccaatgaaaagagagcataacaaggttgtcccaaaagttgt 53781755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 8e-36; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 1897787 - 1897871
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1897787 cattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactcttt 1897871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 2582763 - 2582847
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  2582763 cattgtttttgatcaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaccactcttt 2582847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 32457222 - 32457147
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||| |||||||||||||||| |||||||| |||||||||||||||||| ||||||||    
T  32457222 cattgtttttgaccaatgaaaaaagagaaaaaagaggttatcacaaaatttgtttcaaatagatgtttaaatatca 32457147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 16337040 - 16336955
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| |||||||||||| || ||| |||||||||| |||||| |||||| ||||||||||||||| |||||||||    
T  16337040 cattgtttttgaccaatgaaaagagagagaatagaagttgtcacaagagttgtctcaaatggatgttcaaatatcattactctttt 16336955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 34021141 - 34021057
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||||||| |||||||||||| |||||| ||||| | ||||||||| |||||| ||||||||||||||| |||||||||    
T  34021141 attgtttttgaccaatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactctttt 34021057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 32853113 - 32853033
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||| |||| |||||| |||||||||||| |||||||||||| |||| |||||||| ||||||||||||| |||||    
T  32853113 attgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatcactactc 32853033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 32253881 - 32253966
Alignment:
Q  47 cattgtttttgaccattgaaaagagaga-aaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||| |||| |||||||||||| ||||| |  ||||||||||||||||  ||||||| ||||||||||||| ||||||||    
T  32253881 cattgtttttaaccaatgaaaagagagagaaaaaaaaattgtcacaaaagttgtaccaaatagttgttcaaatatcactactcttt 32253966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 30906633 - 30906549
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||| ||||| |||| | |||||||||| ||||||  |||||| || ||||||||||||| ||||||||||||||| ||||||||    
T  30906633 cattatttttaaccaataaaaagagagagaaaagaaattgtcataagagttgtttcaaatggatgttcaaatatcactactcttt 30906549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 9954649 - 9954735
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||| |||| |||||||||||||| |||| ||||||| |||||||||| | |||| | ||||||||||||| | |||||||    
T  9954649 cattgtttttaaccaatgaaaagagagaaagaagaagttgtcaccaaaagttgtattaaatggttgttcaaatatcactcctctttt 9954735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 29383658 - 29383743
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| || |||| |||  |   |||||||||| || |||||||||    
T  29383658 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataaattgtctcatttgcttgttcaaataacactactctttt 29383743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 7304074 - 7303999
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatca 122  Q
    |||||||||||||| ||| ||||||||| || ||||||||| |||||||||| || ||| || |||||||||||||    
T  7304074 attgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatca 7303999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 11785458 - 11785541
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatcaatactct 129  Q
    ||||||||||||||| | |||| |||||||||| | ||||||||| ||||||| | |||| || ||||||||||||| ||||||    
T  11785458 cattgtttttgaccaataaaaaaagagaaaaaacaagttgtcacataagttgtctaaaatgagttgttcaaatatcactactct 11785541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 24752337 - 24752412
Alignment:
Q  52 tttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatact 127  Q
    |||||||||| ||||||| ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| ||||    
T  24752337 tttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactact 24752412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 1803970 - 1804056
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||  |||| | ||||| ||||||||| |||||||||    
T  1803970 cattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactctttt 1804056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 19713095 - 19713181
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||| |||| ||||||||||| | ||  |||||||| ||||||||||| | ||| || ||||||||||||| |||||||||    
T  19713095 cattgttttttaccaatgaaaagagagcacaacaaggttgtcccaaaagttgttgtaaaaaagttgttcaaatatcattactctttt 19713181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 26378355 - 26378273
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||| |||||||| ||||||  ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| ||||||    
T  26378355 cattgtctttgaccaatgaaaaatgagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactct 26378273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 12044431 - 12044484
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| ||| || ||||||||| |||||||||| ||||||||||    
T  12044431 cattgtttttgaccaatgagaaaagagaaaaaggaggttgtcataaaagttgtt 12044484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 120
Target Start/End: Complemental strand, 23653862 - 23653789
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatat 120  Q
    |||||||||||||  ||| |||||||||||| |||||||||| ||||||||||  ||||| | |||||||||||    
T  23653862 attgtttttgacctatgagaagagagaaaaatgaggttgtcataaaagttgttagcaaatggttgttcaaatat 23653789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 31517132 - 31517067
Alignment:
Q  65 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||||| ||||||||| ||||||| |||  ||| |||||||||| || |||||||    
T  31517132 aaaagagagaaaaaagaagttgtcacataagttgtctcatttagttgttcaaataacactactctt 31517067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 3660323 - 3660271
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | ||||||||||||||  |||||||||| ||||||||    
T  3660323 cattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgt 3660271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 11742953 - 11742901
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    |||||||||||||| ||| |||||||||||| |||||||||| | ||||||||    
T  11742953 attgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgtt 11742901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 21857521 - 21857454
Alignment:
Q  65 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||||| ||||||| |||| |||| ||| |||| | ||||||||||| |||| ||||    
T  21857521 aaaagagagaaaaaagaagttgtcataaaaattgtctcatatagttattcaaatatcactactatttt 21857454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 31480806 - 31480723
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||| |||| |||| | ||||||||||||||||| ||||||||| || |||| |||  ||| |||||||||| || |||||||    
T  31480806 cattgattttaaccaataaaaagagagaaaaaagaagttgtcacataaattgtctcatttagttgttcaaataacactactctt 31480723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 608631 - 608545
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| ||| ||||||||| ||  |||||||| ||| ||||||  | |||||| ||||||||||||| | |||||||    
T  608631 cattgtttttgaccaatgagaagagagaacaacaaggttgtcccaacagttgtaccaaaatagttgttcaaatatcattgctctttt 608545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 15722472 - 15722386
Alignment:
Q  48 attgtttttgaccattgaaaagagag-aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 133  Q
    |||||||||||||  | |||| |||| |||||| | |||||||  |||||| | | |||||| ||||||||||||||||||||||||    
T  15722472 attgtttttgacctataaaaaaagaggaaaaaaaaagttgtcattaaagttatctaaaatagttgttcaaatatcaatactctttta 15722386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 16743235 - 16743194
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtca 89  Q
    |||||||||||||| ||| |||||||||||| ||||||||||    
T  16743235 attgtttttgaccaatgagaagagagaaaaatgaggttgtca 16743194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 32644713 - 32644766
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    |||||||||| |||| ||| |||||||||||| |||||||||| | ||||||||    
T  32644713 cattgttttttaccaatgagaagagagaaaaatgaggttgtcatagaagttgtt 32644766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 2165270 - 2165218
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||| | |   |||||||||||||||||||    
T  2165270 cattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgt 2165218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 2176903 - 2176851
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||| | |   |||||||||||||||||||    
T  2176903 cattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgt 2176851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 20712167 - 20712243
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    |||||||||||| ||  || |||||||||||| |||||||||| | ||||||||  ||||| | |||||||||||||    
T  20712167 cattgtttttgatcaacgagaagagagaaaaaggaggttgtcatagaagttgttaacaaatggttgttcaaatatca 20712243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 128
Target Start/End: Complemental strand, 31255406 - 31255350
Alignment:
Q  72 agaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||| ||||||| |||||||||||||||| | || |||||||  |||||||    
T  31255406 agaaaaaagaagttgtcataaaagttgtttcaaatggttgatcaaataaaaatactc 31255350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 5e-34; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 48866900 - 48866815
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  48866900 cattgtttttgactaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcactactctttt 48866815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 30180608 - 30180690
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  30180608 cattgtttttgacccatgaaaagagagaaaaaagaggttgtcgcaaaaattgtttcaaatagatgttcaaatatcactactct 30180690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 37856151 - 37856070
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||| |||||    
T  37856151 cattgtttttgaccaatgaaaagagagaaaaaagagattatcacaaaagttgtttcaaatagatgtttaaatatcactactc 37856070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 33684781 - 33684863
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||| |||| |||||||| |||||||||| ||||||||||||||||||||| |||| |||||||||| || ||||||    
T  33684781 cattgttttttaccaatgaaaagatagaaaaaagaagttgtcacaaaagttgtttcatatagttgttcaaataacactactct 33684863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 12141986 - 12142066
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||||| |||||||| |||||||| | ||||||||||||||||| |||||| | ||||||||||||| |||||    
T  12141986 attgtttttgaccaatgaaaagaaagaaaaaaaaagttgtcacaaaagttgtatcaaatggttgttcaaatatcactactc 12142066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 8792567 - 8792485
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||| | ||||||||||||||||||   |||||||||||||||| |||||| | ||||||||||||| |||||||||    
T  8792567 cattgtttttgactaatgaaaagagagaaaaaag---ttgtcacaaaagttgtatcaaatggttgttcaaatatcattactctttt 8792485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 34348997 - 34348914
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||| |||| |||||||||||| |||||| ||||| | ||||||||| | |||||||||||||||||||| |||||||    
T  34348997 cattgttttttaccaatgaaaagagagagaaaagaagttgttaaaaaagttgtatgaaatagatgttcaaatatcactactctt 34348914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 5978680 - 5978761
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||| |||||| ||| || | ||||||||||||| |||||    
T  5978680 cattgtttttgaccaatgaaaagagagaaaatagaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 5978761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 21752759 - 21752840
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| ||||||||||||||||| |  |||||||||||||||||||| || | |||||||||| || |||||    
T  21752759 cattgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtttcatattgttgttcaaataacactactc 21752840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 44894444 - 44894363
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||| |||| |||||||||||| |||||| |||||||||||| || | |||||| ||||||||||||||| |||||    
T  44894444 cattgttttttaccaatgaaaagagagataaaagaagttgtcacaaaaattatctcaaatggatgttcaaatatcactactc 44894363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 46651773 - 46651858
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| ||||||||||||||| ||| |||||||||| | |||| ||| || | ||||||||||||| |||||||||    
T  46651773 cattgtttttgaccaatgaaaagagagaaaatagaagttgtcacaagaattgtatcatatggttgttcaaatatcactactctttt 46651858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 7077723 - 7077648
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| ||||||| ||| ||||| | ||||||||||||||||||| |||||| |||||||||||||    
T  7077723 cattgtttttaaccaatgaaaagtgaggaaaaaaaagttgtcacaaaagttgtttaaaatagttgttcaaatatca 7077648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 37351960 - 37351877
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| | |||||||||||||||||  |||||||||||||| | ||||||   ||||||||||||| |||||||    
T  37351960 cattgtttttgaccaataaaaagagagaaaaaagaaattgtcacaaaagttatatcaaatgattgttcaaatatcactactctt 37351877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 45607125 - 45607208
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| ||||||| ||||||||||| |||||  |||||||| | | |||||| ||||||||||||| |||||||    
T  45607125 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttatctaaaatagttgttcaaatatcactactctt 45607208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 2790278 - 2790360
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||| ||||||| | |||| || ||||||||||||| |||||    
T  2790278 cattgtttttgaccaatgaaaagagagagaaaagaagttgtcacataagttgtctaaaatgagttgttcaaatatcactactc 2790360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 41966429 - 41966511
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| | ||||  ||||||||||| ||||||| |||| |||||| |||||| ||||||||||||| ||||||    
T  41966429 cattgtttttgaccaataaaaactgagaaaaaagaagttgtcataaaaattgtttaaaatagttgttcaaatatcactactct 41966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 107
Target Start/End: Original strand, 43025910 - 43025968
Alignment:
Q  49 ttgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 107  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||||||    
T  43025910 ttgtttttaaccattgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaata 43025968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 5378728 - 5378809
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||||||||| ||||||  |||| | ||||||||| |||||| |||||| |||||||| |||||    
T  5378728 cattgtttttgaccaatgaaaagagagagaaaagaaattgttaaaaaagttgtctcaaatggatgtttaaatatcactactc 5378809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 10591254 - 10591334
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||| |||| ||||| | ||||||||||| ||||||||||||||||| |||||| | ||||||||||||| |||||    
T  10591254 cattgttttttaccaatgaaa-gtgagaaaaaagaagttgtcacaaaagttgtctcaaatggttgttcaaatatcactactc 10591334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 21858848 - 21858929
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||| || ||||||| || |||||||| ||| ||||||||||||||| |||| | ||||||||||||| |||||    
T  21858848 cattgtttttgatcaatgaaaagtgaaaaaaaagaagttatcacaaaagttgtttaaaatggttgttcaaatatcactactc 21858929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 25887684 - 25887765
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| ||||||| ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| |||||    
T  25887684 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactc 25887765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 6353829 - 6353912
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaa-gaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||| |||| |||||| |||||||||| ||  |||||||||||||||| |||||||| | ||||||||||| ||||||    
T  6353829 cattgtttttaaccaatgaaaaaagagaaaaaaagaaattgtcacaaaagttgtatcaaatagtttttcaaatatcactactct 6353912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 12102679 - 12102610
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaa 116  Q
    |||||||||| |||| ||||||||||||||||| | ||||||||||||||||| | |||| | |||||||    
T  12102679 cattgtttttaaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctgaaatggttgttcaa 12102610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 155948 - 155868
Alignment:
Q  50 tgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||||| |||||||  |||||||||| |||||  |||||||||| | |||| | ||||||||||||| |||||||    
T  155948 tgtttttgaccaatgaaaagtaagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactctt 155868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 21839103 - 21839023
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatact 127  Q
    |||||||||| |||| |||||| |||||||||| |  |||| |||||| |||| |||||||| ||||||||||||| ||||    
T  21839103 cattgtttttaaccaatgaaaaaagagaaaaaataaattgttacaaaaattgtatcaaatagttgttcaaatatcactact 21839023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 28110056 - 28110132
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||| ||| ||||| |||| ||||||||||  ||||| | |||||||||||||    
T  28110056 cattgtttttgaccaatgaaaagagagagaaatgaggtcgtcataaaagttgttagcaaatggttgttcaaatatca 28110132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 32315928 - 32316008
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatact 127  Q
    |||||||||||||| | | ||||||||||||  | |||||||||||||||||  |||||||| ||||||||||||| ||||    
T  32315928 attgtttttgaccaataagaagagagaaaaacaatgttgtcacaaaagttgtcgtcaaatagttgttcaaatatcattact 32316008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 37392144 - 37392220
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| |||||||||||||||| ||||||||||  |||||||||  ||||| | |||||||||||||    
T  37392144 cattgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatca 37392220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 47193028 - 47193108
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatact 127  Q
    ||||||||||||||| ||||||| ||||||||||| |||||  |||||||| | | |||| | ||||||||||||| ||||    
T  47193028 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttatctaaaatggttgttcaaatatcactact 47193108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 18157155 - 18157080
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||   ||||||||| | | |||||  ||||||| |||||||||||||    
T  18157155 cattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatagttgttcaaatatca 18157080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 44185278 - 44185353
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatca 122  Q
    |||||||||||||| ||| ||||||||| || ||||||||| |||||||||| || ||| || |||||||||||||    
T  44185278 attgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtatcaaaagagttgttcaaatatca 44185353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 7807157 - 7807240
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||| |||| |||||||||||  |||||| ||||||| |||||||||| | |||| | ||||||||||||| ||||||||    
T  7807157 cattgtttttaaccaatgaaaagagag--aaaagaagttgtcatcaaaagttgtatgaaatggttgttcaaatatcactactcttt 7807240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 32933653 - 32933723
Alignment:
Q  52 tttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| | |||| ||| ||||||||  |||||||||||||||| |||||||  |||||||||||||    
T  32933653 tttttgaccaataaaaatagaaaaaaaagaaattgtcacaaaagttgtatcaaataattgttcaaatatca 32933723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 38995993 - 38995911
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||| ||||||||| |||||| ||| ||||||||  |||||||| |||||||| || ||   ||||||||||||||||||||    
T  38995993 cattgattttgaccaatgaaaaaagaaaaaaaagaaattgtcacataagttgttacatatgattgttcaaatatcaatactct 38995911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 40693497 - 40693411
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatcaatactctttta 133  Q
    |||||||||||||| ||| |||||||||||| |||||||||| | ||||||||  || || | ||||||||||||| | ||||||||    
T  40693497 attgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgttagcacatggttgttcaaatatcattgctctttta 40693411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 40717209 - 40717127
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| ||||| |||| | ||||||||||||||||| |||||||| ||||||||| | |||| | ||||||||||||| |||||    
T  40717209 cattatttttaaccaataaaaagagagaaaaaagaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactc 40717127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 4678164 - 4678217
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||  |||||||||    
T  4678164 cattgtttttgaccaatgaaaatagagaaaaaggaggttgtcatcaaagttgtt 4678217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 21588897 - 21588844
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| ||| |||||||||||| |||||||||| | ||||||||    
T  21588897 cattgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgtt 21588844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 34304645 - 34304608
Alignment:
Q  52 tttttgaccattgaaaagagagaaaaaagaggttgtca 89  Q
    |||||||||| |||||||||||||||||||||||||||    
T  34304645 tttttgaccaatgaaaagagagaaaaaagaggttgtca 34304608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 45432045 - 45432125
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatcaatact 127  Q
    ||||||||||||||| | |||| |||||||||||| ||||||||| ||||||| | |||| || ||||||||||||| ||||    
T  45432045 cattgtttttgaccaataaaaa-agagaaaaaagaagttgtcacataagttgtctaaaatgagttgttcaaatatcactact 45432125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 5198730 - 5198654
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatca 122  Q
    ||||||||||||||  |||||||||||||||||||  || ||||| ||||||| | |||| || |||||||||||||    
T  5198730 cattgtttttgaccgatgaaaagagagaaaaaagaaattatcacataagttgtctaaaatgagttgttcaaatatca 5198654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 19510327 - 19510275
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    |||||||||||| || ||||||||||||||||| | ||||| |||||||||||    
T  19510327 cattgtttttgatcaatgaaaagagagaaaaaataagttgttacaaaagttgt 19510275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 25940636 - 25940552
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||||||| |||||||||||||||   ||||||||| | |  ||||  ||||||| ||||||||||||| | |||||||    
T  25940636 attgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaatagattgtaccaaatagttgttcaaatatcattgctctttt 25940552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 39875779 - 39875735
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcaca 91  Q
    ||||||||||||||| |||||||||||||||||||  ||||||||    
T  39875779 cattgtttttgaccaatgaaaagagagaaaaaagaaattgtcaca 39875735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 40077356 - 40077432
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | | |||| ||||||| |||||||||| ||||||||||  ||||| | |||||||||||||    
T  40077356 cattgtttttgaccaataagaagaaagaaaaaggaggttgtcataaaagttgttaacaaatggttgttcaaatatca 40077432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 43445516 - 43445592
Alignment:
Q  55 ttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||| | |||||| ||||||||||  ||||||||||| |||| ||||||   ||||||||||||| ||||||||    
T  43445516 ttgaccaataaaaagaaagaaaaaagaaattgtcacaaaaattgtatcaaatgattgttcaaatatcactactcttt 43445592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Original strand, 41254878 - 41254927
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||| |||| |||||||||||||||||   ||||||||||||||||||    
T  41254878 attgtttttaaccaatgaaaagagagaaaaaa---gttgtcacaaaagttgtt 41254927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 81
Target Start/End: Complemental strand, 42204696 - 42204662
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaaga 81  Q
    ||||||||||||||| |||||||||||||||||||    
T  42204696 cattgtttttgaccaatgaaaagagagaaaaaaga 42204662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 43260090 - 43260175
Alignment:
Q  47 cattgtttttgaccattgaaaagagaga-aaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||| |||| | |||||||||| ||||||| ||||||| |||||||||| | |||| | ||||||||||| | |||||||    
T  43260090 cattgtttttaaccaattaaaagagagagaaaaagaagttgtcatcaaaagttgtatgaaatggttgttcaaatatgactactctt 43260175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 2414164 - 2414237
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| |||||||||||| ||  || ||||||||| || |||| |||| ||| |||||||||||||    
T  2414164 cattgtttttaaccaatgaaaagagagagaa--gaagttgtcacataaattgtctcaactagttgttcaaatatca 2414237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 29034186 - 29034238
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||||||||  || |||||| ||| |||||    
T  29034186 cattgtttttgaccaatgaaaagagagaaaaagaagattgtcaaaaaggttgt 29034238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 42431824 - 42431876
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  42431824 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 42431876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 46148267 - 46148343
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||| |||  ||||||| |  |||||||||  ||||| | |||||||||||||    
T  46148267 cattgtttttgaccaatgaaaagagagagaaataaggttgttatgaaagttgttaacaaatggttgttcaaatatca 46148343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 28811529 - 28811604
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28811529 cattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatattcaaatatca 28811604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 2117610 - 2117525
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||| |||| |||||| |||||||||||| ||||||||||||||||| |||||||| ||||||||||||| |||||||||    
T  2117610 cattgtttttaaccaatgaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactctttt 2117525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 39595375 - 39595456
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||||| |||||    
T  39595375 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatatcattactc 39595456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 20719985 - 20719902
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||| |||||||||| |||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||| |||||||    
T  20719985 cattatttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactctt 20719902  T

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Target: chr5; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 11306798 - 11306879
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||| |||| ||||||||||||||||||| |||||| |||||||||| |||||||| ||||||||||||| ||||||    
T  11306798 attgtttttaaccaatgaaaagagagaaaaaagaagttgtctcaaaagttgtatcaaatagttgttcaaatatcactactct 11306879  T

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Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 33567209 - 33567125
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||||||||| |||||| | |||||| |||||| ||||||||    
T  33567209 cattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtatcaaatggttgttcatatatcactactcttt 33567125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 127
Target Start/End: Original strand, 125194 - 125273
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatact 127  Q
    |||||||||||||| ||||||||||||||||||| |||||| |||||||||| |||||| | ||||||||||||| ||||    
T  125194 attgtttttgaccaatgaaaagagagaaaaaagaagttgtcgcaaaagttgtatcaaatggttgttcaaatatcactact 125273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 34767387 - 34767313
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatc 121  Q
    |||| |||||||||| |||||||||||| |||||| |||||||||| |||||| |||||||||||||||||||||    
T  34767387 cattatttttgaccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatagatgttcaaatatc 34767313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 4834999 - 4834924
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||| ||||||| |||||||||||| |||||| ||| |||||| |||||| ||||||||||||||||||||||    
T  4834999 cattgttcttgaccaatgaaaagagagagaaaagaagttatcacaagagttgtctcaaatagatgttcaaatatca 4834924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 19376102 - 19376020
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||| |||  ||| |||||||||| || ||||||    
T  19376102 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgtctcatttagttgttcaaataacactactct 19376020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 19127225 - 19127310
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||| ||||| ||||||  ||||||||||| |||||| |||||||||||| |||| | ||||||||||||| |||||||||    
T  19127225 cattgttttggaccaatgaaaaatgagaaaaaagaagttgtcgcaaaagttgtttaaaatggttgttcaaatatcactactctttt 19127310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 5130348 - 5130264
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||| |||| ||||||||||||||||||| |||||||| |||| |||| | |||||| ||||||||||||| |||||||    
T  5130348 cattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaaaattgtatgaaatagttgttcaaatatcactactctt 5130264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 12718350 - 12718263
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttttat 134  Q
    ||||||||||||||| |||||||| ||| |||||| |||||||||||| |||||  |||| | ||||||||||||| ||||| |||||    
T  12718350 cattgtttttgaccaatgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttgttcaaatatcactactcatttat 12718263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 33243711 - 33243624
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttttat 134  Q
    |||||||||| |||| ||||||||||||||||| |  |||||||||||||| | | |||| | ||||||||||||| |||||||||||    
T  33243711 cattgtttttaaccaatgaaaagagagaaaaaataaattgtcacaaaagttatctgaaatggttgttcaaatatcattactcttttat 33243624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 34381113 - 34381188
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||| || |||||||||||| || | |||||| | |||||||||||||    
T  34381113 cattgtttttgaccaatgaaaagagagaaaaacgaagttgtcacaaaaattatatcaaatggttgttcaaatatca 34381188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 40566187 - 40566104
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaa-aagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| ||||||||||||||| || | ||||| | ||||||||| |||||| ||||||||||||||| ||||||    
T  40566187 cattgtttttgaccaatgaaaagagagaaaataaaaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 40566104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 27392672 - 27392590
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| |||||||||| |||||| | ||||||||||||||||| ||| || | |||||||||| || ||||||    
T  27392672 cattgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactct 27392590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 91316 - 91400
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| ||||||||||||||| | ||||||||| | | ||||| |||||| | ||||||||||||| | ||||||    
T  91316 cattgtttttgaccaatgaaaagagagaaaagaaaggttgtcaaataggttgtatcaaatggttgttcaaatatcattgctcttt 91400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 10232606 - 10232682
Alignment:
Q  53 ttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| |||| ||||||||||||||||||| ||||||| |||||||||| | |||||| ||||||||||||| |||||    
T  10232606 ttttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtataaaatagttgttcaaatatcactactc 10232682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 12779576 - 12779489
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttttat 134  Q
    ||||||||||||||| |||||||| ||| |||||| |||||||||||| |||||  |||| | | ||||||||||| ||||| |||||    
T  12779576 cattgtttttgaccaatgaaaagaaagagaaaagaagttgtcacaaaaattgttgaaaatggttattcaaatatcactactcatttat 12779489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 23991333 - 23991408
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    |||||||||||||| |||||||||||||||| |||||| ||| ||||||||||  ||||| | |||||||||||||    
T  23991333 attgtttttgaccaatgaaaagagagaaaaatgaggttctcaaaaaagttgttagcaaatggttgttcaaatatca 23991408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 31284364 - 31284289
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| |||||||||||| |||||| |||||| |||||||||| | |||| | |||||||||||||    
T  31284364 cattgtttttaaccaatgaaaagagagagaaaagaagttgtcgcaaaagttgtatgaaatggttgttcaaatatca 31284289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 11666280 - 11666330
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagtt 97  Q
    ||||||||||||||| ||||||||||||||||||| ||||| |||||||||    
T  11666280 cattgtttttgaccaatgaaaagagagaaaaaagaagttgttacaaaagtt 11666330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 12661911 - 12661841
Alignment:
Q  53 ttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||| |||| ||||||||||||||||||| ||||||| |||||||||| | |||||| |||||||||||||    
T  12661911 ttttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatagttgttcaaatatca 12661841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 24431577 - 24431507
Alignment:
Q  58 accattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| |||||||||||||||| || |||||||||| |||||| |||||| | ||||||||||||| |||||    
T  24431577 accaatgaaaagagagaaaaatgaagttgtcacaatagttgtctcaaatggttgttcaaatatcactactc 24431507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 26627431 - 26627506
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||||| | || |||||||||  |||||||||  ||||||||  ||||||| |||||||||||||    
T  26627431 cattgtttttgaccattaataaaagagaaaaagaaggttgtcatgaaagttgtaccaaatagttgttcaaatatca 26627506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 132
Target Start/End: Original strand, 9403641 - 9403699
Alignment:
Q  74 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||| ||||||||||||||||| |||||| | |||| |||||||| |||||||||    
T  9403641 aaaaaagaagttgtcacaaaagttgtatcaaatggttgtttaaatatcactactctttt 9403699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 9714106 - 9714024
Alignment:
Q  47 cattgtttttgaccattgaaaa-gagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||| || |||||| ||| |||||||||| |||||| ||| || | ||||||||||||| |||||    
T  9714106 cattgtttttgaccaatgaaaaagatagaaaatagaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 9714024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 17574194 - 17574108
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| ||| |||| |||| ||  |||||||| ||||||||||  | |||||| ||||||||||||| |||||||||    
T  17574194 cattgtttttgaccagtgagaagaaagaacaacaaggttgtcccaaaagttgtaccaaaatagttgttcaaatatcattactctttt 17574108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 19437359 - 19437433
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||||||| | ||||||||||||| | ||||||||| ||| |||||   |||||| |||||||||||||    
T  19437359 attgtttttgaccaatcaaaagagagaaaagaaaggttgtcaaaaatgttgtactaaatagttgttcaaatatca 19437433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 41460217 - 41460291
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatat 120  Q
    |||||||||| |||| |||||||||||||||| ||||||||||  |||||||||  ||||| | |||||||||||    
T  41460217 cattgtttttaaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatat 41460291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 121
Target Start/End: Original strand, 43482486 - 43482540
Alignment:
Q  67 aagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatc 121  Q
    |||| |||||||||| |||||||||||| |||| |||||||| ||||||||||||    
T  43482486 aagaaagaaaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatc 43482540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 8959261 - 8959346
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| | ||||||||||||||  |||||||| | ||||||||  |||| | ||||| ||||||||| ||||||||    
T  8959261 cattgtttttgaccaataaaaagagagaaaaacaaggttgtcgccaaagttgtcatcaattggatgtacaaatatcactactcttt 8959346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 11464093 - 11464040
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| | ||||||||||||||  |||||||||| |||||||||    
T  11464093 cattgtttttgaccaataaaaagagagaaaaacaaggttgtcactaaagttgtt 11464040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 13613934 - 13613849
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||| |||| |||||||||||||||||||  |||||| |||||||||| | ||||   ||||||||||||| || |||||    
T  13613934 cattgtttttaaccaatgaaaagagagaaaaaagaaattgtcaccaaaagttgtatgaaatgattgttcaaatatcactattcttt 13613849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 17063966 - 17064019
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    |||||||||| |||| |||||||||||| ||| |||||||||| ||||||||||    
T  17063966 cattgtttttaaccaatgaaaagagagagaaatgaggttgtcataaaagttgtt 17064019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 21749459 - 21749544
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||| |||| |||||||||||||||||||  |||||| ||||| || | | |||| | ||||||||||||| ||||||||    
T  21749459 cattgtttttaaccaatgaaaagagagaaaaaagaaattgtcaccaaaaattatataaaatggttgttcaaatatcactactcttt 21749544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 26626789 - 26626704
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| | | || |||||||||| |||||||||  ||||||||  ||||| | ||||||||||||| | |||||||    
T  26626789 cattgtttttgaccaataacaaaagagaaaaaaaaggttgtcatgaaagttgtaacaaatggttgttcaaatatcattgctctttt 26626704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 3960139 - 3960063
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    |||||||||||| || |||||||||| ||||| ||||||||||  |||||||||  ||||| | |||||||||||||    
T  3960139 cattgtttttgatcaatgaaaagagaaaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatca 3960063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 11767949 - 11767877
Alignment:
Q  58 accattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||| ||||||| ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| |||||||    
T  11767949 accaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactctt 11767877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 39458742 - 39458794
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| |||||||||| |||||| | |||||||||||| ||||    
T  39458742 cattgtttttgaccaatgaaaagagataaaaaaaaagttgtcacaaaaattgt 39458794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 41210483 - 41210431
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    |||||||||||||| | | |||||||||||| |||||||||| ||||||||||    
T  41210483 attgtttttgaccaataagaagagagaaaaaggaggttgtcataaaagttgtt 41210431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 9636128 - 9636053
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||   ||||||||| | | |||||  ||||| | |||||||||||||    
T  9636128 cattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaaatatca 9636053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 29803325 - 29803400
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    |||||||||||||| | | |||||||||||| ||||||||||  |||||||||  ||||||  |||||||||||||    
T  29803325 attgtttttgaccaataataagagagaaaaaggaggttgtcatcaaagttgttagcaaataattgttcaaatatca 29803400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 14323938 - 14323856
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| | ||||| ||||||||||| |||||  |||||||| | |||||  | |||| |||||||| ||||||    
T  14323938 cattgtttttgaccaataaaaagtgagaaaaaagaagttgtaccaaaagttatctcaaaaggttgtttaaatatcactactct 14323856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 17990315 - 17990397
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||| | ||| ||| ||||||||| |  |||||||||||||||| |||||  | |||| |||||||| ||||||    
T  17990315 cattgtttttgacaaatgagaagtgagaaaaaataaattgtcacaaaagttgtctcaaacggttgtttaaatatcactactct 17990397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 471915 - 471956
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtc 88  Q
    |||||||||||| || ||||||||||||||||||| ||||||    
T  471915 cattgtttttgatcaatgaaaagagagaaaaaagaagttgtc 471956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 3141602 - 3141678
Alignment:
Q  52 tttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||| |||| ||||||||||||||||| | ||||||| |||||||||| | |||| | ||||||||||||| |||||    
T  3141602 tttttaaccaatgaaaagagagaaaaaa-aagttgtcatcaaaagttgtatgaaatggttgttcaaatatcactactc 3141678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 6865757 - 6865684
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatat 120  Q
    ||||||||||||||| ||||||||||||||| | | ||||||| | |  || | |||||||| |||||||||||    
T  6865757 cattgtttttgaccaatgaaaagagagaaaataaaagttgtcaaatagattatatcaaatagttgttcaaatat 6865684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 7144678 - 7144751
Alignment:
Q  49 ttgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||| ||||||| | ||||||||||||||  ||||||||| ||| ||||| |||||| | || ||||||||||    
T  7144678 ttgttattgaccaataaaaagagagaaaaagaaggttgtcaaaaaggttgtatcaaatggttgctcaaatatca 7144751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 12612987 - 12612906
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatact 127  Q
    ||||||||||||||| ||| ||||||||| ||  |||||||| ||||||||||  | |||| | ||||||||||||| ||||    
T  12612987 cattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaccaaaatggttgttcaaatatcattact 12612906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 17489449 - 17489534
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| | | ||||||||||||  || ||||||| ||||||||  |||| | ||||| ||||||||| ||||||||    
T  17489449 cattgtttttgaccaataagaagagagaaaaacaagattgtcaccaaagttgtcatcaattggatgtacaaatatcactactcttt 17489534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 42909820 - 42909861
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtc 88  Q
    ||||||||||||||| |||||||||||| |||||| ||||||    
T  42909820 cattgtttttgaccaatgaaaagagagagaaaagaagttgtc 42909861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 12349926 - 12349966
Alignment:
Q  87 tcacaaaagttgtttcaaatagatgttcaaatatcaatact 127  Q
    ||||||||||||| |||||||| ||||||||||||| ||||    
T  12349926 tcacaaaagttgtatcaaatagttgttcaaatatcactact 12349966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 12401293 - 12401345
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  12401293 cattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgt 12401345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 15622145 - 15622197
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  15622145 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 15622197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 24792559 - 24792639
Alignment:
Q  53 ttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 133  Q
    ||||||||| |||||||||||||||   ||||||||| | | |||||  ||||| | ||||||||||||| | ||||||||    
T  24792559 ttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctctttta 24792639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 28501718 - 28501770
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  28501718 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 28501770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 33823664 - 33823612
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  33823664 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 33823612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 43214085 - 43214133
Alignment:
Q  84 ttgtcacaaaagttgtttcaaa-tagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||||| |||| ||||||||||||||||| | ||||||    
T  43214085 ttgtcacaaaagttgttgcaaaatagatgttcaaatatcatttctcttt 43214133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 37524398 - 37524316
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||    
T  37524398 cattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaggttatttcaaatagatgttcaaatatcactactct 37524316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 5359439 - 5359520
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  5359439 cattgtttttgaccaataaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 5359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 23258133 - 23258217
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||| | ||||||||||||| ||||||||    
T  23258133 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaaattgtttcaaatggttgttcaaatatcactactcttt 23258217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 7678833 - 7678914
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||| |||| ||||||||||||||||||| ||||| ||||||||||| |||||||| ||||||||||||| |||||    
T  7678833 cattgtttttaaccaatgaaaagagagaaaaaagaagttgttacaaaagttgtatcaaatagttgttcaaatatcattactc 7678914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 26294304 - 26294363
Alignment:
Q  74 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 133  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  26294304 aaaaaagaggttgtcacaaaagttgtttcaaatatatgttcaaatatcactactctttta 26294363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 26307561 - 26307620
Alignment:
Q  74 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 133  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  26307561 aaaaaagaggttgtcacaaaagttgtttcaaatatatgttcaaatatcactactctttta 26307620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 41344639 - 41344554
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| |||||||||||| |||||| ||| ||| || |||||| |||||| ||||||||||||||| |||||||||    
T  41344639 cattgtttttgaccaatgaaaagagagagaaaagaagttatcataagagttgtctcaaatggatgttcaaatatcactactctttt 41344554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 38128496 - 38128421
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||||| ||||||||||| |||||||||||| |||||| |||| | |||||||||||||    
T  38128496 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaaattgtttaaaatggttgttcaaatatca 38128421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 40413333 - 40413250
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||| | ||||||||||||||||||| ||| ||| ||||||||| |||||| | ||||||||||||| |||||||    
T  40413333 cattgtttttgactaatgaaaagagagaaaaaagaagttatcataaaagttgtatcaaatggttgttcaaatatcactactctt 40413250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 21273679 - 21273598
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||| |||| ||||||||||||||| | | ||||||||||||||||| | |||||| ||||||||||||| ||||||    
T  21273679 attgtttttaaccaatgaaaagagagaaaagaaaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactct 21273598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 22767231 - 22767283
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  22767231 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 22767283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 295648 - 295731
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||||||| |||||| |||||||||| |  |||||||||||||| | |||||||| |||||||||| || ||||||||    
T  295648 attgtttttgaccaatgaaaatagagaaaaaataaattgtcacaaaagttatctcaaatagttgttcaaataacactactcttt 295731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 28927782 - 28927857
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||||| || | |||||| | |||||||||||||    
T  28927782 cattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaaattttatcaaatggttgttcaaatatca 28927857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 44672203 - 44672128
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| |||||||||||||||||||   ||||||||||||||| |||||||  |||||||||||||    
T  44672203 cattgtttttaaccaatgaaaagagagaaaaaagaatgtgtcacaaaagttgtatcaaataattgttcaaatatca 44672128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 426202 - 426255
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||    
T  426202 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgtt 426255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 3989006 - 3989089
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||| ||||||| |||  | | |||||||||| || |||||||    
T  3989006 cattgtttttgactaatgaaaagagagaaaaaagaagttgtcacataagttgtctcatttggttgttcaaataacactactctt 3989089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 22852809 - 22852738
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaat 118  Q
    ||||||||||||| | ||||||| |||||||||||  ||||||||||| |||||| |||||| |||||||||    
T  22852809 cattgtttttgacaaatgaaaagtgagaaaaaagaaattgtcacaaaaattgtttaaaatagttgttcaaat 22852738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 119
Target Start/End: Original strand, 24503019 - 24503090
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 119  Q
    |||||||||||||| |||||||||||||||| || ||||||| ||||||||| |||||| | | ||||||||    
T  24503019 attgtttttgaccaatgaaaagagagaaaaatgaagttgtcataaaagttgtctcaaatggttattcaaata 24503090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 106
Target Start/End: Original strand, 896009 - 896067
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat 106  Q
    |||||||||||||| ||||||||||||||||||| ||||| | ||||||||| ||||||    
T  896009 attgtttttgaccaatgaaaagagagaaaaaagaagttgttaaaaaagttgtctcaaat 896067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 26871145 - 26871211
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgtt 113  Q
    ||||||||||||||| |||||||||||| ||||||  ||||||||| |||||| |||||| ||||||    
T  26871145 cattgtttttgaccaatgaaaagagagagaaaagaaattgtcacaagagttgtctcaaatggatgtt 26871211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 28473515 - 28473441
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatc 121  Q
    |||||||||| |||| ||||||||||||||||||| ||||| | |||| |||| |||| || |||||||||||||    
T  28473515 cattgttttttaccaatgaaaagagagaaaaaagaagttgttaaaaaaattgtctcaattaaatgttcaaatatc 28473441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 37101656 - 37101574
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||| |||| ||||||||||||||||||| |||||||| |||| |||| | |||| | ||||||||||||| |||||    
T  37101656 cattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacgaaaaattgtatgaaatggttgttcaaatatcactactc 37101574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 30925624 - 30925541
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||| |||| ||||||||||||||||| | ||||||| |||||||||| | |||| | ||||||||||||| |||||||    
T  30925624 cattgtttttaaccaatgaaaagagagaaaaaa-aagttgtcaccaaaagttgtataaaatggttgttcaaatatcactactctt 30925541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 42543451 - 42543367
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||  ||| ||||||||||||||||||| ||||||| |||||||||| | |||| | ||||||| ||||| |||||||    
T  42543451 cattgtttttagccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaattatcactactctt 42543367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 42689886 - 42689959
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| |||||||||||||||||||  |||||||||||||  |  ||||||| |||||||||||||    
T  42689886 cattgtttttaaccaatgaaaagagagaaaaaagaaattgtcacaaaagt--taacaaatagttgttcaaatatca 42689959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 10344429 - 10344512
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatcaatactct 129  Q
    |||| |||||||||| | |||||| |||||||  ||||||||| |||||||||| |||||||||||| || |||||| ||||||    
T  10344429 cattatttttgaccaataaaaagaaagaaaaacaaggttgtcataaaagttgttatcaaatagatgtacatatatcactactct 10344512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 11223829 - 11223747
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaataga-tgttcaaatatcaatactct 129  Q
    |||||||||| |||| ||||||| ||||||||||| |||||  |||||||||| ||||| ||| ||||||||||||| ||||||    
T  11223829 cattgttttttaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctcaaa-agattgttcaaatatcactactct 11223747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 16011887 - 16011816
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaat 118  Q
    |||||||||| |||| |||||||||||||||||||  ||||||||||| || | | |||||| |||||||||    
T  16011887 cattgtttttaaccaatgaaaagagagaaaaaagaaattgtcacaaaaattatattaaatagttgttcaaat 16011816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 34474050 - 34474137
Alignment:
Q  47 cattgtttttgaccattgaaaagagaga-aaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||| |||| |||||| ||||| ||||||| |||||||| ||||||||| | |||| | ||||||||||||| |||||||||    
T  34474050 cattgtttttaaccaatgaaaaaagagagaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcattactctttt 34474137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 1179477 - 1179559
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||| | || |||||| ||| |||||| | ||||||||||||||| | |||||||| |||| |||||||| ||||||    
T  1179477 cattgttttttatcaatgaaaaaagaaaaaaaaaaagttgtcacaaaagttatatcaaatagttgtttaaatatcactactct 1179559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 9738663 - 9738581
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||| ||||||||| | |||| ||||||||||||  |||||||||||||| | ||| |||| ||||||||||  ||||||||    
T  9738663 cattgattttgaccaataaaaaaagagaaaaaagaaattgtcacaaaagttatctcatatagctgttcaaataataatactct 9738581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 18538480 - 18538554
Alignment:
Q  49 ttgtttttgaccattgaaaagagagaaaaaa-gaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||| | ||||||| ||||||| || ||||||||||||||||   ||||||| |||||||||||||    
T  18538480 ttgtttttgaccaataaaaagagggaaaaaaagaagttgtcacaaaagttgaaccaaatagttgttcaaatatca 18538554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 41776276 - 41776362
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| ||||||||||| | ||  |||||||| ||||||||||  | ||| || ||||||||||||| |||||||||    
T  41776276 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctttt 41776362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 105
Target Start/End: Original strand, 34247876 - 34247933
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaa 105  Q
    |||||||||||||| ||||||||||||| ||  |||||||| |||||||||| |||||    
T  34247876 attgtttttgaccaatgaaaagagagaacaacaaggttgtcccaaaagttgtctcaaa 34247933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 40102124 - 40102205
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| ||||| |||| |||||||||||| |||| | ||||||||||||||||| ||| || | |||||||||| || |||||    
T  40102124 catttttttttaccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactc 40102205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 42443207 - 42443292
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| ||| ||| ||||| ||  ||||||||| |||| ||||  ||||||| ||||||||||||| | |||||||    
T  42443207 cattgtttttgaccaatgagaagggagaagaagaaggttgtcaaaaaatttgtaccaaatagttgttcaaatatcattgctctttt 42443292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 1422672 - 1422596
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||| | |||| ||  |||||||| |||||||||| || |||||| |||||||||||||    
T  1422672 cattgtttttgaccaatgaaaaaatagaataacaaggttgtcccaaaagttgtatcaaaatagttgttcaaatatca 1422596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 5502461 - 5502548
Alignment:
Q  47 cattgtttttgaccattgaaaaga--gagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| ||||||||  |||| | |||| |||||||||||| || | ||||||   ||||||||||||| |||||||||    
T  5502461 cattgtttttgaccaatgaaaagatagagagagaagaagttgtcacaaaaattatatcaaatgattgttcaaatatcactactctttt 5502548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 9000984 - 9000908
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||||||||| |||| ||||||| ||  |||||||||  ||||| | |||||||||||||    
T  9000984 cattgtttttgaccaatgaaaagagagtaaaatgaggttgacattaaagttgttagcaaatggttgttcaaatatca 9000908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 14029210 - 14029130
Alignment:
Q  50 tgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||| |||| |||||||||||| |||| | ||||||| |||||||||| |||||| | |||| |||||||| ||||||    
T  14029210 tgtttttaaccaatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactct 14029130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 30578355 - 30578407
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||  ||||||||    
T  30578355 cattgtttttgaccaatgataagagagaaaaaggaggttgtcatcaaagttgt 30578407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 33817258 - 33817334
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | ||||||||||||||  || ||||||| ||| ||||| | |||||||||| |||||||||    
T  33817258 cattgtttttgaccaataaaaagagagaaaaacaagattgtcactaaaattgttatgaaatagatgtacaaatatca 33817334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 38844761 - 38844685
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | | |||||||| |||||||||||||| |||| |||||  ||||| | |||||||||||||    
T  38844761 cattgtttttgaccaataagaagagagagaaaagaggttgtcataaaaattgttaacaaatggttgttcaaatatca 38844685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 154392 - 154475
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||||||| | |||||||||||||   | |||||||||| |||||| | || | | ||||||||||||| ||||||||    
T  154392 attgtttttgaccaataaaaagagagaaaatgaaagttgtcacaatagttgtcttaattggttgttcaaatatcactactcttt 154475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 1796584 - 1796659
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||   ||||||||| | | |||||  ||||| | |||||||||||||    
T  1796584 cattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaacaaatggttgttcaaatatca 1796659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 128
Target Start/End: Complemental strand, 21648898 - 21648819
Alignment:
Q  50 tgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||| |||| |||||||||||| |||| | ||||||| |||||||||| |||||| | |||| |||||||| |||||    
T  21648898 tgtttttaaccaatgaaaagagagagaaaataagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactc 21648819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 52 - 91
Target Start/End: Complemental strand, 26507868 - 26507829
Alignment:
Q  52 tttttgaccattgaaaagagagaaaaaagaggttgtcaca 91  Q
    |||||||||| ||||||||||||||||||| |||||||||    
T  26507868 tttttgaccaatgaaaagagagaaaaaagaagttgtcaca 26507829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 42047437 - 42047480
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcaca 91  Q
    ||||||||| |||||| ||||||||||||||||| |||||||||    
T  42047437 attgttttttaccattaaaaagagagaaaaaagaagttgtcaca 42047480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 130
Target Start/End: Original strand, 43403921 - 43403968
Alignment:
Q  83 gttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||| |||||||| |||||||| ||||||||||||| |||||||    
T  43403921 gttgtcacgaaagttgtctcaaatagttgttcaaatatcactactctt 43403968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 45101497 - 45101579
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||  ||| ||||||||||||||||| | ||||||| |||||||||| | |||| | ||||||||||||| ||||||    
T  45101497 cattgtttttatccaatgaaaagagagaaaaaa-aagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactct 45101579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 3206432 - 3206351
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||||| | ||||||||||||||  | |||||||||||| || |  |||||| | ||||||||||||| |||||    
T  3206432 attgtttttgaccaattaaaagagagaaaaagtatgttgtcacaaaaattatcatcaaatggttgttcaaatatcattactc 3206351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 24946103 - 24946175
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||||| |||||||||   |||||  |||||||||| | |||| | |||||||||||||    
T  24946103 cattgtttttgaccaatgaaaagtgagaaaaaa---gttgtaccaaaagttgtctaaaatggttgttcaaatatca 24946175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 98
Target Start/End: Original strand, 27836287 - 27836332
Alignment:
Q  53 ttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttg 98  Q
    ||||||||| |||||||||||| |||||| ||||||||| ||||||    
T  27836287 ttttgaccaatgaaaagagagagaaaagaagttgtcacataagttg 27836332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 42996563 - 42996604
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtc 88  Q
    |||| |||||||||| ||||||||||||||||||| ||||||    
T  42996563 cattatttttgaccaatgaaaagagagaaaaaagaagttgtc 42996604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 2597130 - 2597078
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  2597130 cattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgt 2597078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 127
Target Start/End: Complemental strand, 9305966 - 9305886
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaataga-tgttcaaatatcaatact 127  Q
    ||||||||||| || ||||||||||||| |   |||||||| |||||||||| |||||| || ||| ||||||||| ||||    
T  9305966 attgtttttgatcaatgaaaagagagaatatcaaggttgtctcaaaagttgtctcaaatggattgtacaaatatcattact 9305886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 9963787 - 9963862
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| ||||||||||||||||| | ||| ||| |||||||||| | |||| | |||||||||||||    
T  9963787 cattgtttttaaccaatgaaaagagagaaaaaa-aagttatcatcaaaagttgtataaaatggttgttcaaatatca 9963862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 122
Target Start/End: Complemental strand, 12668808 - 12668752
Alignment:
Q  66 aaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||   | ||||||||||||||| |||||| ||| |||||||||||||    
T  12668808 aaagagagaaaatgaaagttgtcacaaaagttttttcaattagttgttcaaatatca 12668752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 14548795 - 14548719
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| ||| |||||||||||| ||||||||||   ||||||||  ||||||| |||| ||||||||    
T  14548795 cattgttttttaccaatgagaagagagaaaaatgaggttgtcattgaagttgttagcaaatagttgttaaaatatca 14548719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 20284828 - 20284884
Alignment:
Q  67 aagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatca 122  Q
    ||||||||||||  |||||||||||||||||||  |||||| | |||||||||||||    
T  20284828 aagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatca 20284884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 122
Target Start/End: Original strand, 21071457 - 21071513
Alignment:
Q  67 aagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatca 122  Q
    ||||||||||||  |||||||||||||||||||  |||||| | |||||||||||||    
T  21071457 aagagagaaaaagaaggttgtcacaaaagttgtcatcaaatggttgttcaaatatca 21071513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 30927901 - 30927849
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  30927901 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 30927849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 37471744 - 37471828
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| ||||||||||| | ||  || ||||| ||||||||||  | ||| || ||||||||||||| |||||||    
T  37471744 cattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 37471828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 38174219 - 38174143
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||  ||||||| ||| |||||||||| | ||||||||  ||||| | |||||||||||||    
T  38174219 cattgtttttgaccaatgaggagagagagaaaggaggttgtcatagaagttgttagcaaatggttgttcaaatatca 38174143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 42651022 - 42651106
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaa-tagatgttcaaatatcaatactcttt 131  Q
    ||||||||| |||| ||| ||||||||| ||  |||||||| ||||||||||  |||| ||| ||||||||||||| || |||||    
T  42651022 attgtttttaaccaatgagaagagagaacaacaaggttgtctcaaaagttgtaccaaaatagttgttcaaatatcattattcttt 42651106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 74)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 47849771 - 47849853
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||    
T  47849771 cattgtttttgaccaatgaaaagagagaaaaaagaggctgtcacaagagttgtttcaaatagatgttcaaatatcactactct 47849853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 11173551 - 11173637
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 133  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||| | ||||||||||    
T  11173551 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatggttgttcaaatattattactctttta 11173637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 29706004 - 29706085
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||| |||| ||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||| |||||    
T  29706004 cattgttttttaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatcactactc 29706085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 52727418 - 52727333
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||| |||||||||| |||||| ||||||||||||| ||||||||||| |||||||||||||||||| |||||||| |||||||||    
T  52727418 cattatttttgaccaatgaaaatagagaaaaaagagattgtcacaaaaattgtttcaaatagatgtttaaatatcactactctttt 52727333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 20380859 - 20380776
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| |||| | ||||||||||||| |||||||    
T  20380859 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtcacaaaagttgtttaaaatggttgttcaaatatcactactctt 20380776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 46473229 - 46473312
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| |||||| | ||||||||||||| |||||||    
T  46473229 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcataaaagttgtatcaaatggttgttcaaatatcattactctt 46473312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 34733263 - 34733183
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||||||  ||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||    
T  34733263 cattgtttttgaccaa-gaaaaaagagaaaaaagagattgtctcaaaagttgtttcaaatagatgttcaaatatcactactc 34733183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 19418130 - 19418055
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||| |||||| |||||| |||||||||||||||    
T  19418130 cattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatca 19418055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 7231976 - 7231894
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| ||||||||||||||||| |  |||||||||||||||| |||||| | ||||||||||||| ||||||    
T  7231976 cattgtttttgaccaatgaaaagagagaaaaaataaattgtcacaaaagttgtatcaaatggttgttcaaatatcactactct 7231894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 41112042 - 41111960
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| |||||||||||| |||||| ||||| | ||||||||| |||||| ||||||||||||||| ||||||    
T  41112042 cattgtttttgaccaatgaaaagagagagaaaagaagttgttaaaaaagttgtctcaaatggatgttcaaatatcactactct 41111960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 32687930 - 32687846
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||| |||| ||||||||||||||||||| ||| |||| ||||||||| |||||||| ||||||||||||| |||||||    
T  32687930 cattgtttttaaccaatgaaaagagagaaaaaagaagttatcaccaaaagttgtatcaaatagttgttcaaatatcattactctt 32687846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 49130955 - 49131030
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||| | |||||||||||| |||||| |||||||||||| |||| |||||| |||||||||||||||    
T  49130955 cattgtttttgactaatgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatca 49131030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 34271458 - 34271373
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatag--atgttcaaatatcaatactctt 130  Q
    |||| |||||||||| |||||||||||||||||||| ||||  |||||||||||||||||||  || ||||||||||| |||||||    
T  34271458 cattatttttgaccaatgaaaagagagaaaaaagagattgtatcaaaagttgtttcaaatagatatcttcaaatatcactactctt 34271373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 37215201 - 37215129
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 119  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||| || | ||||||||||    
T  37215201 cattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 37215129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 48 - 130
Target Start/End: Original strand, 37303485 - 37303567
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||| || ||||||||||||||||| |  |||||||||||||||| ||| |||| |||||||||| || |||||||    
T  37303485 attgtttttgatcaatgaaaagagagaaaaaataaattgtcacaaaagttgtctcatatagttgttcaaataacactactctt 37303567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 41957614 - 41957695
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| ||||||| |||||||||||  || ||||||||||||||| |||| | |||| |||||||| |||||    
T  41957614 cattgtttttgaccaatgaaaagtgagaaaaaagaaattatcacaaaagttgtttaaaatggttgtttaaatatcactactc 41957695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 5188337 - 5188389
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||||||||    
T  5188337 cattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgt 5188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 6126555 - 6126643
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactcttttat 134  Q
    |||||||||| |||| ||||||||||||||||||| ||||| | |||||||||| | |||| | ||||||||||||| |||||| ||||    
T  6126555 cattgtttttaaccaatgaaaagagagaaaaaagaagttgtaaccaaaagttgtatgaaatggttgttcaaatatcactactctattat 6126643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 28269907 - 28269979
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 119  Q
    ||||||||||||||| |||||||| |||||||||| |||||| |||||||||| ||| || | ||||||||||    
T  28269907 cattgtttttgaccaatgaaaagatagaaaaaagaagttgtcgcaaaagttgtctcatatggttgttcaaata 28269979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 28300615 - 28300535
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||||| ||||||||||||||| | | |||||||||| |||||| ||| || | ||||||||||||| |||||    
T  28300615 attgtttttgaccaatgaaaagagagaaaataaaagttgtcacaagagttgtatcatatggttgttcaaatatcactactc 28300535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 44127162 - 44127086
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| ||| |||||||||||| |||||||||| ||||||||||  ||||||| |||||||||||||    
T  44127162 cattgtttttaaccaatgagaagagagaaaaatgaggttgtcataaaagttgttagcaaatagttgttcaaatatca 44127086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 33007461 - 33007543
Alignment:
Q  47 cattgtttttgaccattgaaaagagag-aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| ||||||||||| |||||||| |||||||||||| |||| ||| || | |||||||||| || |||||    
T  33007461 cattgtttttgaccaatgaaaagagagaaaaaaagaagttgtcacaaaaattgtctcatatggttgttcaaataacactactc 33007543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 35272128 - 35272210
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatcaatactc 128  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||| ||||||| | |||| |  ||||||||||||| |||||    
T  35272128 cattgtttttgaccaataaaaagagagaaaaaagaagttgtcacataagttgtctaaaatgaattgttcaaatatcactactc 35272210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 53715422 - 53715492
Alignment:
Q  53 ttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||| | ||| |||||||||||| |||||||||| |||||||||| |||||||| |||||||||||||    
T  53715422 ttttgactaatgagaagagagaaaaaggaggttgtcataaaagttgttatcaaatagttgttcaaatatca 53715492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 48 - 133
Target Start/End: Complemental strand, 55344265 - 55344179
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaa-gttgtttcaaatagatgttcaaatatcaatactctttta 133  Q
    ||||||||| |||| ||||||||||||||| | | ||||||| |||| ||||| | |||||| ||||||||||||| ||||||||||    
T  55344265 attgtttttaaccaatgaaaagagagaaaagaaaagttgtcataaaatgttgtatgaaatagttgttcaaatatcactactctttta 55344179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 27198124 - 27198071
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    |||||||||| |||| |||||||||||||||| |||||||||| ||||||||||    
T  27198124 cattgtttttaaccaatgaaaagagagaaaaatgaggttgtcataaaagttgtt 27198071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 37303044 - 37302963
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||| |||| |||||||||||||||||||  |||||||||||||||| ||| ||   |||||||||| || |||||    
T  37303044 cattgttttttaccaatgaaaagagagaaaaaagaaattgtcacaaaagttgtctcatatgcttgttcaaataacactactc 37302963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 55 - 128
Target Start/End: Complemental strand, 46315917 - 46315844
Alignment:
Q  55 ttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||| |||||||| ||| |||| | |||||||||| |||||| || ||| |||||||||||||||||||||    
T  46315917 ttgaccaatgaaaagaaagataaaaaaagttgtcacaagagttgtctcgaatggatgttcaaatatcaatactc 46315844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 32457725 - 32457642
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtc--acaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| ||||| |||| ||||||||||||||||||| ||||||  | |||| |||| |||||||| ||||||||||||| |||||    
T  32457725 cattatttttaaccaatgaaaagagagaaaaaagaagttgtcaaaaaaaaattgtatcaaatagttgttcaaatatcactactc 32457642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 36869807 - 36869731
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||| ||| ||||||||||  |||||||||  ||||| | |||||||||||||    
T  36869807 cattgtttttgaccaatgaaaagagagagaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatca 36869731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 39604216 - 39604144
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 119  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| | ||||| | |||  ||| ||||||||||    
T  39604216 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcaaataagttatctcatttagttgttcaaata 39604144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 31997921 - 31997988
Alignment:
Q  65 aaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||| |||||| ||||||| |||||||||| |||||| | ||||||||||||| ||||||||    
T  31997921 aaaagagagagaaaagaagttgtcatcaaaagttgtctcaaatggttgttcaaatatcactactcttt 31997988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 42475947 - 42475861
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 133  Q
    ||||| ||||||||| ||||||||||||||||| | ||| ||||||||||||| | | || | |||||||||| || ||||| ||||    
T  42475947 cattggttttgaccaatgaaaagagagaaaaaataagttttcacaaaagttgtcttatatggttgttcaaataacactactcattta 42475861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 49457666 - 49457708
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca 89  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  49457666 cattgtttttgaccaatgaaaagagagaaaaatgaggttgtca 49457708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 51672964 - 51673046
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| ||||||  || |||||||| |||||  |||||||||| | |||| | ||||||||||||| ||||||    
T  51672964 cattgtttttgaccaatgaaaactgaaaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactct 51673046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 25959512 - 25959427
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| |||||||||||||||   | ||||||| | | ||||| |||||| | ||||||||||||| | |||||||    
T  25959512 cattgtttttgaccaatgaaaagagagaaaatgaaagttgtcaaataggttgtatcaaatggttgttcaaatatcattgctctttt 25959427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 35376521 - 35376468
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| | |||||||||| ||| |||||||||| ||||||||||    
T  35376521 cattgtttttgaccaataaaaagagagagaaatgaggttgtcataaaagttgtt 35376468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 47276386 - 47276439
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| ||| |||||||||||| |||||||||| | ||||||||    
T  47276386 cattgtttttgaccaatgagaagagagaaaaaggaggttgtcatagaagttgtt 47276439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 21481866 - 21481949
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata-gatgttcaaatatcaatactcttt 131  Q
    |||||||||||||| ||| ||||||||| || ||||||||| |||||||||| | ||||| | ||||||||||||| | ||||||    
T  21481866 attgtttttgaccaatgagaagagagaacaatgaggttgtctcaaaagttgtat-aaataggttgttcaaatatcactcctcttt 21481949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 31249292 - 31249216
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| |||||||||| |||||| | |||||||| ||||||||| | |||| | |||||||||||||    
T  31249292 cattgtttttaaccaatgaaaagagaaaaaaaaaaagttgtcaccaaaagttgtatgaaatggttgttcaaatatca 31249216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 32931888 - 32931812
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||| | |||| ||||| |||||||||    
T  32931888 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgttgtgaaatggatgtacaaatatca 32931812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 34628045 - 34627969
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||| | | ||||||  |||||||||   |||||| |||||||||||||    
T  34628045 cattgtttttgaccaatgaaaagagagaaaaatgtgattgtcatgaaagttgttaataaatagttgttcaaatatca 34627969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 40785669 - 40785593
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||| ||||||||| ||||||||||  ||||| |||  ||||| | |||||||||||||    
T  40785669 cattgtttttgaccaatgaaaatagagaaaaaggaggttgtcatcaaagtcgttagcaaatggttgttcaaatatca 40785593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 43169723 - 43169642
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||| |||| ||||||||||||||||  | ||||||| |||||||||| | |||| | ||||||||||||| ||||||    
T  43169723 cattgtttttaaccaatgaaaagagagaaaaa--aagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactct 43169642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 48117437 - 48117521
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| ||||||||||| | ||  |||||||| ||||||||||  | ||| || ||||||||||||| |||||||    
T  48117437 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 48117521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 51650455 - 51650542
Alignment:
Q  47 cattgtttttgaccattgaaa--agagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||| |||| |||||  |||||||||||||| ||||||| |||||||||| | |||| | |||||||||||||  |||||||    
T  51650455 cattgtttttaaccaatgaaaagagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcaccactcttt 51650542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 7294066 - 7293987
Alignment:
Q  50 tgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||||| ||||||   |||||||||| |||||  |||||||||| | |||| | ||||||||||||| ||||||    
T  7294066 tgtttttgaccaatgaaaaataagaaaaaagaagttgtatcaaaagttgtctaaaatggttgttcaaatatcactactct 7293987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 9027974 - 9028049
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | |||| ||||| ||| || |||||||||||| | || |||||| | |||||||||||||    
T  9027974 cattgtttttgaccaataaaaatagagagaaacgaagttgtcacaaaaatcgtatcaaatggttgttcaaatatca 9028049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 99
Target Start/End: Complemental strand, 26022028 - 26021977
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    |||||||||||||| | ||||||| ||||||  |||||||||||||||||||    
T  26022028 attgtttttgaccaataaaaagagtgaaaaagaaggttgtcacaaaagttgt 26021977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 44365262 - 44365175
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctttta 133  Q
    ||||||||||  ||| |||||||||||| |||||| ||||||| ||||| |||| | |||| | |||||||||||||  |||||||||    
T  44365262 cattgtttttacccaatgaaaagagagagaaaagaagttgtcaccaaaaattgtataaaatggttgttcaaatatcaccactctttta 44365175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 48945948 - 48946023
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||||  ||||||||||| ||| ||| | || |||||||||||   |||||||||||||    
T  48945948 cattgtttttgaccaatgaaaattgagaaaaaagaagttatcatataaattgtttcaaatgattgttcaaatatca 48946023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 1295434 - 1295508
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||||||| |||||||| |||||||  ||||||||| ||  |||||  ||||| | |||||||||||||    
T  1295434 attgtttttgaccaatgaaaagatagaaaaagaaggttgtcaaaattgttgtagcaaatggttgttcaaatatca 1295508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 36799499 - 36799541
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca 89  Q
    ||||||||||||||| |||||||||||||||| || |||||||    
T  36799499 cattgtttttgaccaatgaaaagagagaaaaatgaagttgtca 36799541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 43409335 - 43409293
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca 89  Q
    ||||||||||||||| ||||||||||||||||| || ||||||    
T  43409335 cattgtttttgaccaatgaaaagagagaaaaaaaagattgtca 43409293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 46953086 - 46953132
Alignment:
Q  83 gttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||| ||||||||| |||||||| ||||||||||||| ||||||    
T  46953086 gttgtcataaaagttgtatcaaatagttgttcaaatatcactactct 46953132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 51385410 - 51385336
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatat 120  Q
    ||||||||||||||| ||||||||||||| ||   ||||||| ||||||||||  | |||||| |||||||||||    
T  51385410 cattgtttttgaccaatgaaaagagagaacaacatggttgtcccaaaagttgtactaaaatagttgttcaaatat 51385336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 54233471 - 54233389
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||  |||| | ||||| ||||||||| |||||    
T  54233471 cattgtttttgaccaataagaagagagaaaaacaaggttgtcaccaaagttgtcatcaattggatgtacaaatatcactactc 54233389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 108532 - 108615
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||  ||| |||||| |||||||||| || ||||||| ||||||||| | |||||| ||||||||||||| ||||||||    
T  108532 cattgtttttatccaatgaaaa-agagaaaaaaaag-ttgtcaccaaaagttgtatgaaatagttgttcaaatatcactactcttt 108615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 1901896 - 1901823
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatat 120  Q
    ||||||||||||||| |||||||||||||||   ||||||||| | | |||||  ||||| | |||||||||||    
T  1901896 cattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatat 1901823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 1911342 - 1911269
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatat 120  Q
    ||||||||||||||| |||||||||||||||   ||||||||| | | |||||  ||||| | |||||||||||    
T  1911342 cattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtaccaaatggttgttcaaatat 1911269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 9027714 - 9027799
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| | | ||||||||| ||  |||||||  ||||||||||  | |||||| ||||||||||||| ||||||||    
T  9027714 cattgtttttgaccaataagaagagagaacaacaaggttgtaccaaaagttgtaccaaaatagttgttcaaatatcattactcttt 9027799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 14207476 - 14207517
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtc 88  Q
    ||||||||||||||| | ||||||||||||||||| ||||||    
T  14207476 cattgtttttgaccaataaaaagagagaaaaaagaagttgtc 14207517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 88
Target Start/End: Original strand, 14215224 - 14215265
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtc 88  Q
    ||||||||||||||| | ||||||||||||||||| ||||||    
T  14215224 cattgtttttgaccaataaaaagagagaaaaaagaagttgtc 14215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 14957937 - 14958018
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatcaatact 127  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||| || |||| | |||| || || |||||||||| ||||    
T  14957937 cattatttttgaccaatgaaaagggcgaaaaaagaggttgtcacataaattgtctaaaatgagctgatcaaatatcactact 14958018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 20216049 - 20216102
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||  |  ||||||||||||| ||||||||||||||| |||||    
T  20216049 cattgtttttgaccgatagaaagagagaaaaatgaggttgtcacaaaaattgtt 20216102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 101
Target Start/End: Complemental strand, 23553559 - 23553507
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgttt 101  Q
    |||||| ||| ||| ||||||||||||||||| |||||||||| ||||||||||    
T  23553559 attgttattgtccaatgaaaagagagaaaaaa-aggttgtcactaaagttgttt 23553507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 41877581 - 41877528
Alignment:
Q  47 cattgtttttgaccattgaaaagagaga-aaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| |||||||||||| |||||||  |||||||| |||||||    
T  41877581 cattgtttttgaccaatgaaaagagagagaaaaagaaattgtcacataagttgt 41877528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 51973393 - 51973442
Alignment:
Q  83 gttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||||||||||  ||||| ||||||||||||||| | |||||||    
T  51973393 gttgtcacaaaagttgtaccaaatggatgttcaaatatcatttctctttt 51973442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 8066456 - 8066507
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||| ||||| | |||||||||| ||||||    
T  8066456 cattgtttttgaccaatgaaaagagag-aaaaataagttgtcacaatagttgt 8066507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 9159006 - 9158954
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||| | ||  |||||||| ||||||||||    
T  9159006 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgt 9158954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 13159762 - 13159814
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  13159762 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 13159814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 36819057 - 36819109
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  36819057 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 36819109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 42102338 - 42102414
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | |||| | ||||||| ||||||||||  |||||||||  ||||| | |||||||||||||    
T  42102338 cattgtttttgaccaataaaaaaaaagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatca 42102414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 44593067 - 44593119
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| |||||| ||||||||   ||||||||| |||||||||    
T  44593067 cattgtttttgaccaatgaaaatagagaaaatgaaggttgtcaaaaaagttgt 44593119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 69)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 29795537 - 29795618
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  29795537 cattgtttttgaccaatgaaaagagagaaaaaagtggttgtcacaaaagttgtttcaaattgatgttcaaatatcactactc 29795618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 39454217 - 39454135
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| ||||||    
T  39454217 cattgtttttgaccaatgaaaagagagaaaaaagagattgtctcaaaacttgtttcaaatagatgttcaaatatcactactct 39454135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 3091842 - 3091926
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||  ||||||||||||| ||||||||    
T  3091842 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaataattgttcaaatatcactactcttt 3091926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 6365287 - 6365362
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  6365287 cattgtttttgaccaataaaaagagagaaaaaagaggttgtcataaaagttgttttaaatagatgttcaaatatca 6365362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 34442214 - 34442295
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| | |||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  34442214 cattgtttttgaccaataaaaagagagagaaaagaggttgtcagaaaaattgtttcaaatagatgttcaaatatcactactc 34442295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 11164346 - 11164271
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||    
T  11164346 cattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaatatca 11164271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 36435782 - 36435857
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| | || |||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  36435782 cattgttttttatcaatgaaaagagagagaaaagaggttgtcacaaaagttgtttcaaataaatgttcaaatatca 36435857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 13711162 - 13711246
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||| |||| ||||||||||||||||||| |||||||||||||||||   |||||| ||||||||||||| ||||||||    
T  13711162 cattgtttttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtacaaaatagttgttcaaatatcactactcttt 13711246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 22390253 - 22390337
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| |||||||||||| |||||| |||||||||| |||||| |||||| ||||||||||||||  ||||||||    
T  22390253 cattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatctctactcttt 22390337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 36133075 - 36133159
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||| || |||| ||||||||||||||||||| ||||||||||||||||| | |||||| ||||||||||||| ||||||||    
T  36133075 cattgttcttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatcactactcttt 36133159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 14714088 - 14714168
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||| || |||||||||||| |||||| |||||||||||| |||| |||||| ||||||||||||||| |||||    
T  14714088 attgtttttgatcaatgaaaagagagagaaaagaagttgtcacaaaaattgtctcaaatggatgttcaaatatcactactc 14714168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 12600149 - 12600224
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||| || |||| ||||||||||||||||||| ||||||||||||||||| | |||||| |||||||||||||    
T  12600149 cattgttcttaaccaatgaaaagagagaaaaaagaagttgtcacaaaagttgtatgaaatagttgttcaaatatca 12600224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 25801781 - 25801706
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||||||||||||||||| ||  ||||||||||||| |||||| | |||||||||||||    
T  25801781 cattgtttttgaccaatgaaaagagagaaaaaagaagtgatcacaaaagttgtctcaaattgttgttcaaatatca 25801706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 2013254 - 2013173
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||||||| |||||||||||| |||| | |||||||||| |||||| |||||| |||||| |||||||| ||||||    
T  2013254 attgtttttgaccaatgaaaagagagagaaaataagttgtcacaagagttgtctcaaatggatgttaaaatatcactactct 2013173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 14140309 - 14140228
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||||||||||||||||  |||||||||||||| ||| ||||   ||||||||||||| |||||    
T  14140309 cattgtttttgaccaatgaaaagagagaaaaaagaaattgtcacaaaagttattttaaatgattgttcaaatatcactactc 14140228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 23344958 - 23344878
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||||| |||||||||||| |||||| ||||||| || |||||| ||||||  |||||||||||||| |||||    
T  23344958 attgtttttgaccaatgaaaagagagagaaaagaagttgtcagaagagttgtctcaaatgaatgttcaaatatcactactc 23344878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 32750099 - 32750183
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||| |||| ||| || | |||||||||| || ||||||||    
T  32750099 cattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactcttt 32750183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 36376821 - 36376737
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| ||||||||||||||||||| ||||| | |||| || | |||| ||||||||||||||||| | ||||||    
T  36376821 cattgtttttgaccaatgaaaagagagaaaaaagaagttgttaaaaaaattatctcaattagatgttcaaatatcactcctcttt 36376737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 37631337 - 37631261
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||  ||||| | |||||||||||||    
T  37631337 cattgtttttgaccaatgagaagagagaaaaaagaggttgtcataaaagttgttagcaaatggttgttcaaatatca 37631261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 13104580 - 13104663
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||| |||| ||| || | |||||||||| || |||||||    
T  13104580 cattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactctt 13104663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 42251890 - 42251807
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||| |||||   |||| |||||||| |||||||    
T  42251890 cattgattttgaccaatgaaaagagagaaaaaagaagttgtcacataagttgttccaaatgattgtttaaatatcactactctt 42251807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 8555262 - 8555177
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||||| || |||||||||||||||| |||||||||| ||||||||||  ||||||  ||||||||||||| | ||||||    
T  8555262 cattgtttttgatcaatgaaaagagagaaaaaggaggttgtcataaaagttgttggcaaataattgttcaaatatcattgctcttt 8555177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 11229291 - 11229210
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| ||||||| ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| |||||    
T  11229291 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactc 11229210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 42081139 - 42081220
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||||||| |||||| |||||||||||| ||||| | |||| |||| ||||||  |||||||||||||| ||||||    
T  42081139 attgtttttgaccaatgaaaatagagaaaaaagaagttgttaaaaaaattgtctcaaattaatgttcaaatatcactactct 42081220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 44189929 - 44190011
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||| ||||||| |||||||||||||||  || |||||||||| |||||| || ||| ||||||||||||||| |||||||||    
T  44189929 attgttcttgaccaatgaaaagagagaaaa--gatgttgtcacaagagttgtctcgaatggatgttcaaatatcactactctttt 44190011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 43650517 - 43650430
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttttat 134  Q
    ||||| ||||||||| | |||||||||||||||||  |||||||| ||||||| ||||||   |||| |||||||| |||||||||||    
T  43650517 cattgattttgaccaataaaaagagagaaaaaagaaattgtcacataagttgtatcaaatgattgtttaaatatcattactcttttat 43650430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 43725306 - 43725381
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||||| ||||||||||| |||||  |||||||||| | |||| | |||||||||||||    
T  43725306 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatca 43725381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 39285954 - 39286020
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgtt 113  Q
    |||||||||| |||| | |||| |||||||||||| ||||||||||||||||| |||||||| ||||    
T  39285954 cattgtttttaaccaataaaaaaagagaaaaaagaagttgtcacaaaagttgtatcaaatagttgtt 39286020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 7086093 - 7086012
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||||||| |||||||||||| |||| | |||||||||||| |||| ||| || | |||||||||| || ||||||    
T  7086093 attgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactct 7086012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 31296813 - 31296728
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||| ||||||||| |||||||||||||||||||  |||||||| |||||||  || || | | ||||||||||| |||||||||    
T  31296813 cattgattttgaccaatgaaaagagagaaaaaagaaattgtcacataagttgtcccatatggttattcaaatatcactactctttt 31296728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 1889248 - 1889292
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcaca 91  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||    
T  1889248 cattgtttttgaccaatgaaaagagagaaaaaagaagttgtcaca 1889292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 34249681 - 34249765
Alignment:
Q  47 cattgtttttgaccattgaaaagagag-aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| ||||||||||| |||||| | |||||||||||| |||| ||| || | |||||||||| || |||||||    
T  34249681 cattgtttttgaccaatgaaaagagagaaaaaaataagttgtcacaaaaattgtctcatatggttgttcaaataacactactctt 34249765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 19913885 - 19913968
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||| |||| ||||||||||||||||| | ||||||| | |||||||| | |||| | ||||||||||||| ||||||    
T  19913885 cattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcaccgaaagttgtatgaaatggttgttcaaatatcactactct 19913968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 130
Target Start/End: Complemental strand, 44059692 - 44059609
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||||||| | ||||||||||||||  ||||||||||||||||| |  |||||| | ||||||||||| | |||||||    
T  44059692 attgtttttgaccaattaaaagagagaaaaagtaggttgtcacaaaagttatcatcaaatggttgttcaaatataattactctt 44059609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 45515569 - 45515487
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||| |||| |||||||||||| |||||| ||||||| |||||||||| | |||| | ||||||||||||||| ||||    
T  45515569 cattgtttttaaccaatgaaaagagaga-aaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcaatcctct 45515487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 12962487 - 12962569
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||| |||| | |||||||||| ||||||  |||| |||||| || | |||||||| ||||||||||||| ||||||    
T  12962487 cattgtttttaaccaattaaaagagagagaaaagaaattgttacaaaatttatatcaaatagttgttcaaatatcactactct 12962569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 23045269 - 23045347
Alignment:
Q  54 tttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||| |||||| |||||||||||| ||||||||| ||||||| |||  | | |||||||||| || |||||||||    
T  23045269 tttgaccaatgaaaatagagaaaaaagaagttgtcacataagttgtctcatttggttgttcaaataacactactctttt 23045347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 36763488 - 36763414
Alignment:
Q  49 ttgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||| ||||||||||||||||  ||||||||| |||| |||||  ||||| | |||||||||||||    
T  36763488 ttgtttttgaccaatgaaaagagagaaaaagaaggttgtcataaaaattgttaacaaatggttgttcaaatatca 36763414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 43791760 - 43791675
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||||||| | |||||||||||||   |||||||||||||||||||  | |||  | ||||||||||||| |||||||||    
T  43791760 attgtttttgaccaataaaaagagagaaaaggtaggttgtcacaaaagttgtcactaaaaggttgttcaaatatcattactctttt 43791675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 1574554 - 1574630
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    |||| |||||||||| ||||||||||| |||| ||||||||||  |||||||||  ||||| | |||||||||||||    
T  1574554 cattttttttgaccaatgaaaagagagtaaaatgaggttgtcattaaagttgttagcaaatggttgttcaaatatca 1574630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 131
Target Start/End: Original strand, 2464274 - 2464322
Alignment:
Q  83 gttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||||||    
T  2464274 gttgtcacaaaagttgtatcaaatggatgttcaaatatcatttctcttt 2464322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 3959997 - 3960073
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    |||||||||||| || |||||||||||||||| ||  |||||| ||||||||||  ||||| | |||||||||||||    
T  3959997 cattgtttttgatcaatgaaaagagagaaaaatgaaattgtcataaaagttgttcgcaaatggttgttcaaatatca 3960073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 19668157 - 19668082
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||   ||||| ||| | | ||||| |||||| | |||||||||||||    
T  19668157 cattgtttttgaccaatgaaaagagagaaaaggaaggttatcaaataggttgtatcaaatggttgttcaaatatca 19668082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 30856908 - 30856983
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||||||||||||||  ||||||||| | || ||||  ||||| | |||||| ||||||    
T  30856908 cattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaataaattgtaccaaatggttgttcatatatca 30856983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 694370 - 694420
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagtt 97  Q
    ||||||||||||||| |||||| ||||| ||| |||||||||| |||||||    
T  694370 cattgtttttgaccaatgaaaaaagagataaatgaggttgtcataaaagtt 694420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 6639442 - 6639392
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagtt 97  Q
    |||||||||| |||| |||||||||||| |||||| ||||||||| |||||    
T  6639442 cattgttttttaccaatgaaaagagagagaaaagaagttgtcacataagtt 6639392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Complemental strand, 33296056 - 33295975
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||| |||| ||||||||||||||||| | ||||||| ||||||||||   |||||| | ||||||||||| ||||||    
T  33296056 attgtttttaaccaatgaaaagagagaaaaaa-aagttgtcaccaaaagttgtacgaaatagttcttcaaatatcactactct 33295975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 35008071 - 35007985
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||| |||||||| ||||||||||| | ||  |||||||| ||||||||||  | ||| || ||||||||||||| |||||||||    
T  35008071 cattgtgtttgaccaatgaaaagagagcacaacaaggttgtcccaaaagttgtagtaaaaaagttgttcaaatatcattactctttt 35007985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 35518377 - 35518459
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactct 129  Q
    |||||||||||||| | | ||||||||| ||  | |||||| |||||||||| || |||||| ||||||||||||| ||||||    
T  35518377 attgtttttgaccaataagaagagagaacaacaaagttgtcccaaaagttgtatcaaaatagttgttcaaatatcattactct 35518459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 4263834 - 4263781
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| ||| || |||||||||||| ||||||| |||| |||||    
T  4263834 cattgtttttgaccaatgagaaaagagaaaaaagaagttgtcataaaaattgtt 4263781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 5067611 - 5067531
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| ||||||| ||||||||||| ||||   |||||||||| | ||||   ||||||||||||| |||||    
T  5067611 cattgtttttgaccaatgaaaagtgagaaaaaagaagttg-atcaaaagttgtctaaaatgattgttcaaatatcactactc 5067531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 5455423 - 5455350
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatat 120  Q
    |||||||||| |||| |||||||||||||||||||  ||  | |||||||||| | |||| | |||||||||||    
T  5455423 cattgtttttaaccaatgaaaagagagaaaaaagaaattaccccaaaagttgtataaaatggttgttcaaatat 5455350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 12066010 - 12066063
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgt 99  Q
    ||||| |||| |||| ||||||||||||||||||| ||||||| ||||||||||    
T  12066010 cattgattttaaccaatgaaaagagagaaaaaagaagttgtcaccaaaagttgt 12066063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 18949108 - 18949180
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatat 120  Q
    |||||||||||||| | |||||| ||||||| || |||||||||||||||||| | |||||| ||| |||||||    
T  18949108 attgtttttgaccaataaaaagaaagaaaaa-gaagttgtcacaaaagttgttatgaaatagttgtacaaatat 18949180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 19695661 - 19695581
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| ||||||||||| ||||| | ||||||||| ||||||| |||  | | |||||||||| || |||||    
T  19695661 cattgtttttgaccaatgaaaagagaggaaaaa-aagttgtcacataagttgtctcatttggttgttcaaataacactactc 19695581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 23880196 - 23880277
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| ||||| |||| ||||||||||||||||| |  |||||| ||||||||| ||| || | |||||||||| || |||||    
T  23880196 catttttttttaccaatgaaaagagagaaaaaataaattgtcataaaagttgtctcatatggttgttcaaataacattactc 23880277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 36383563 - 36383616
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| |||||||||    
T  36383563 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtt 36383616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 36909813 - 36909732
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| | | ||||||||||||  | |||||||  |||||||| | |||| ||||| ||||||||| |||||    
T  36909813 cattgtttttgaccaataagaagagagaaaaacaaagttgtcatcaaagttgtatgaaatggatgtacaaatatcactactc 36909732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 132
Target Start/End: Original strand, 7121468 - 7121548
Alignment:
Q  52 tttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||| || |||||||  |||||||||| ||||||||||||||| ||| |||| | | || ||||||||  ||||||||    
T  7121468 tttttgatcaatgaaaagtaagaaaaaagaagttgtcacaaaagttatttaaaatggttatttaaatatcaccactctttt 7121548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 11828790 - 11828706
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| ||||||||||| | ||  ||||||||  |||||||||  | ||| || ||||||||||||| |||||||    
T  11828790 cattgtttttgaccaatgaaaagagagcacaacaaggttgtcctaaaagttgtagcaaaaaagttgttcaaatatcattactctt 11828706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 13881196 - 13881248
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||| | ||  | |||||||||||||||||    
T  13881196 cattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgt 13881248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 14021321 - 14021373
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||| | ||  | |||||||||||||||||    
T  14021321 cattgtttttgaccaatgaaaagagagcacaataaagttgtcacaaaagttgt 14021373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 23048053 - 23048001
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  23048053 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 23048001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 96
Target Start/End: Complemental strand, 25997699 - 25997651
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagt 96  Q
    |||||||||||||| | ||||||||||||| | | ||||||||||||||    
T  25997699 attgtttttgaccaataaaaagagagaaaataaaagttgtcacaaaagt 25997651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 27307215 - 27307163
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  27307215 cattgtttttgaccaataagaagagagaaaaataaggttgtcactaaagttgt 27307163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 35705887 - 35705803
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| ||||||||||| | ||  || ||||| ||||||||||  | ||| || ||||||||||||| |||||||    
T  35705887 cattgtttttgaccaatgaaaagagagcacaacaagattgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 35705803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 36582357 - 36582433
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | | || |||||||||  |||||||||| ||||||||  |||||| ||||| |||||||||    
T  36582357 cattgtttttgaccaattagaatagagaaaaacaaggttgtcaccaaagttgtcatcaaatggatgtacaaatatca 36582433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 37966457 - 37966509
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  37966457 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 37966509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 45202102 - 45202018
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatcaatactctt 130  Q
    |||||||||||| || ||||||||||| | ||  |||||||| ||||||||||  | ||| || ||||||||||||| |||||||    
T  45202102 cattgtttttgatcaatgaaaagagagcacaacaaggttgtcccaaaagttgtagcaaaaaagttgttcaaatatcattactctt 45202018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 38980 - 39061
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| ||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  38980 cattattttttaccaatgaaaagagagaaaaaagagattgtcacaaaagttgtttcaaatagatgttcaaatatcactactc 39061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 129
Target Start/End: Original strand, 113728 - 113808
Alignment:
Q  49 ttgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  113728 ttgtttttgaccaatgaaaagagagaaaagagaggttgtcacaaaaattgtttcaaatagatgtttaaatatcactactct 113808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 2e-24; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 40610330 - 40610411
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||||||||||| |||||| ||||||||||||||| |||||    
T  40610330 cattgtttttgaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtctcaaatggatgttcaaatatcactactc 40610411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 46948080 - 46948162
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| |||||||| ||| |||||| |||||||||| |||||| |||||| ||||||||||||||| ||||||    
T  46948080 cattgtttttgaccaatgaaaagatagagaaaagaagttgtcacaagagttgtctcaaatggatgttcaaatatcactactct 46948162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 22389495 - 22389411
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||| |||||||||| ||||||||||||||||||| ||||||||||||||||  |||||| | ||||||||||||| |||||||||    
T  22389495 cattatttttgaccaatgaaaagagagaaaaaagaagttgtcacaaaagttg-atcaaatggttgttcaaatatcattactctttt 22389411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 49453582 - 49453662
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||| |||| ||||||||||||||||||   |||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  49453582 attgtttttaaccaatgaaaagagagaaaaaag---ttgtcacaaaagttgtatcaaatagttgttcaaatatcactactcttt 49453662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 50659162 - 50659079
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||| ||||||||||| || | |||||||||| || |||||||    
T  50659162 cattgtttttgaccaatgaaaagagagagaaaagaagttgtcacataagttgtttcatatggttgttcaaataacactactctt 50659079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 39010915 - 39010997
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||||||||||| ||| || | |||||||||| || ||||||    
T  39010915 cattgtttttgaccaatgaaaagagagaaaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactct 39010997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 5477133 - 5477073
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 107  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||||||||||| |||||||    
T  5477133 cattgtttttgaccaataaaaagagagaaaaaagaagttgtcacaaaagttgtatcaaata 5477073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 32966368 - 32966444
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | |||||||||||||| |||||||||||||||||||||   |||||| |||||||||||||    
T  32966368 cattgtttttgaccaataaaaagagagaaaaatgaggttgtcacaaaagttgttagtaaatagttgttcaaatatca 32966444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 118
Target Start/End: Original strand, 36418180 - 36418251
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaat 118  Q
    |||| ||||| |||| |||||||||||| |||||| ||||||||||||||||| |||||||| |||||||||    
T  36418180 cattatttttaaccaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaatagttgttcaaat 36418251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 129
Target Start/End: Complemental strand, 30631815 - 30631733
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    ||||||||||||||| ||||||| ||||||||||| |||||  |||||||||| | |||| | ||||||||||||| ||||||    
T  30631815 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatatcactactct 30631733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 21255755 - 21255679
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||  ||||| | |||||||||||||    
T  21255755 cattgtttttgaccaatgagaagagagaaaaaggaggttgtcataaaagttgttagcaaatggttgttcaaatatca 21255679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 119
Target Start/End: Original strand, 28253116 - 28253188
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 119  Q
    ||||||||||||||| |||||||||||| |||||| ||||| ||||||||||| ||| || | ||||||||||    
T  28253116 cattgtttttgaccaatgaaaagagagagaaaagaagttgttacaaaagttgtctcatatggttgttcaaata 28253188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 43640957 - 43640881
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||| ||||||||||  |||||||||  ||||| | |||||||||||||    
T  43640957 cattgtttttgaccaatgaaaagagagaaaaatgaggttgtcatgaaagttgttagcaaatggttgttcaaatatca 43640881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 50141905 - 50141833
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 119  Q
    ||||||||||||||| |||||||||||| |||| |  |||||||||||||||| ||| |||| ||||||||||    
T  50141905 cattgtttttgaccaatgaaaagagagagaaaataaattgtcacaaaagttgtctcatatagttgttcaaata 50141833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 2362476 - 2362551
Alignment:
Q  53 ttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| |||| |||||| ||||| |||||| |||||||||||| |||| |||||||| ||||||||||||| |||||    
T  2362476 ttttaaccaatgaaaaaagagagaaaagaagttgtcacaaaaattgtatcaaatagttgttcaaatatcactactc 2362551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 15466849 - 15466932
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||||||||| | | |||||| ||||||||||| ||||||||||| || ||| |||||||| |||||||||||  |||||||    
T  15466849 attgtttttgacaaataaaaagaaagaaaaaagagattgtcacaaaaattattttaaatagatattcaaatatcaccactcttt 15466932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 31290178 - 31290103
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| |||||| |||||||||| | ||||||||||||||||| | |||| | |||||||||||||    
T  31290178 cattgtttttaaccaatgaaaaaagagaaaaaataagttgtcacaaaagttgtgtgaaatggttgttcaaatatca 31290103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 45740514 - 45740431
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| ||||||  ||||||||||| ||||||| |||| || ||||||||   ||||||||||||| |||||||    
T  45740514 cattgtttttgaccaatgaaaattgagaaaaaagaagttgtcataaaaattatttcaaatgattgttcaaatatcactactctt 45740431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 7645522 - 7645443
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||||||||||||  || ||||| | |||| |||| |||||| ||||||||||||||| |||||    
T  7645522 cattgtttttgaccaatgaaaagagagaaaa--gaagttgttaaaaaaattgtctcaaatggatgttcaaatatcactactc 7645443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 31480105 - 31480023
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||| |||| ||||||||||||||||| | ||||||| ||||| |||| | |||||| ||||||||||||| |||||    
T  31480105 cattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcaccaaaaattgtatgaaatagttgttcaaatatcactactc 31480023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 14002712 - 14002627
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatcaatactcttt 131  Q
    |||| ||||| |||| |||||||||||||||| ||  |||||| ||||||||||  ||||||| ||||||||||||| ||||||||    
T  14002712 cattatttttaaccaatgaaaagagagaaaaatgaaattgtcataaaagttgttagcaaatagttgttcaaatatcactactcttt 14002627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 16836084 - 16836031
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| |||||||  |||||||||| ||||||||||||||||||    
T  16836084 cattgtttttgaccaatgaaaagtaagaaaaaagaagttgtcacaaaagttgtt 16836031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 35846289 - 35846216
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatat 120  Q
    ||||||||||||||| ||||||| ||||||||||| |||||  |||||||||| | |||| | |||||||||||    
T  35846289 cattgtttttgaccaatgaaaagtgagaaaaaagaagttgtaccaaaagttgtctaaaatggttgttcaaatat 35846216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 36690542 - 36690461
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||| ||||| |||| | ||||||||||||||||| ||| || | |||||||||| || |||||    
T  36690542 cattgtttttgaccaatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactc 36690461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 36706643 - 36706562
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||| ||||| |||| | ||||||||||||||||| ||| || | |||||||||| || |||||    
T  36706643 cattgtttttgaccaatgaaaatagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaataacactactc 36706562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 366758 - 366842
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    ||||||||||||||| ||||||||||| ||||| | ||||||||| ||||||| |||  | | |||||||||| || ||||||||    
T  366758 cattgtttttgaccaatgaaaagagaggaaaaaaaagttgtcacataagttgtctcatttggttgttcaaataacattactcttt 366842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 16987548 - 16987624
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||| |||||||||| | || |||||  ||||| | |||||||||||||    
T  16987548 cattgtttttgaccaatgaaaagagagaaaaaggaggttgtcatagaaattgttagcaaatggttgttcaaatatca 16987624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 4604630 - 4604705
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||||||||||||||  ||||||||| | | |||||  ||||| | |||||||||||||    
T  4604630 cattgtttttgaccaatgaaaagagagaaaaagaaggttgtcaaacaggttgtaccaaatcgttgttcaaatatca 4604705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 31427927 - 31427844
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||| |||||||||| ||||||  || ||||||||  |||||| ||||||||||| |||||  ||||||||||||| |||||||    
T  31427927 cattatttttgaccaatgaaaaatgaaaaaaaagaaattgtcataaaagttgtttaaaataattgttcaaatatcactactctt 31427844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 34187365 - 34187440
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||| ||||||||| ||||||||||||||| ||| ||||||||| || |||| ||| || | |||||||||||||    
T  34187365 cattgattttgaccaatgaaaagagagaaaagagaagttgtcacataaattgtctcacatggttgttcaaatatca 34187440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 37843402 - 37843320
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    |||||||||| |||| |||||||||||||||||    |||||||| || || | |||||||| ||||||||||||| |||||||||    
T  37843402 cattgtttttaaccaatgaaaagagagaaaaaaa---ttgtcacacaaattatatcaaatagttgttcaaatatcactactctttt 37843320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 40596024 - 40595949
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||||    |||||| ||| ||||| |||||| | |||||||||||||    
T  40596024 cattgtttttgaccaatgaaaagagagaaaaaaattattgtcaaaaaggttgtatcaaatggttgttcaaatatca 40595949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 48872480 - 48872555
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||   ||||||||| | | ||||| |||||| | |||||||||||||    
T  48872480 cattgtttttgaccaatgaaaagagagaaaaggaaggttgtcaaataggttgtatcaaatggttgttcaaatatca 48872555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 50061946 - 50061871
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||||| || | |||||||||| |||||| ||||| | || | |||||||||||| ||||||||||||||    
T  50061946 cattgtttttgatcaataaaaagagagagaaaagaagttgttataagaattgtttcaaataaatgttcaaatatca 50061871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 51339670 - 51339595
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| |||||||||||||||   ||||||||| | | |||||  ||||||| |||||||||||||    
T  51339670 cattgtttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatagttgttcaaatatca 51339595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 51571534 - 51571602
Alignment:
Q  52 tttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||||||||  |||||||| ||||||||||||||||| | |||| | |||||||||||||    
T  51571534 tttttgaccaatgaaaagag--aaaaaagaagttgtcacaaaagttgtattaaatggttgttcaaatatca 51571602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 27352731 - 27352817
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 133  Q
    ||||||||||||||| ||||||||||||||| | ||||||||  | | |||||  ||||| | ||||||||||||| | ||||||||    
T  27352731 cattgtttttgaccaatgaaaagagagaaaagaaaggttgtcgaataggttgtaccaaatggttgttcaaatatcattgctctttta 27352817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 36930726 - 36930641
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| | ||||||||||||||  ||||||||| ||| |||||   |||| | ||||||||||||| | |||||||    
T  36930726 cattgtttttgaccaataaaaagagagaaaaagaaggttgtcaaaaaggttgtacaaaatggttgttcaaatatcattgctctttt 36930641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Original strand, 37690527 - 37690576
Alignment:
Q  58 accattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 107  Q
    |||| |||||||||||| |||||| ||||||||||||||||| |||||||    
T  37690527 accaatgaaaagagagagaaaagaagttgtcacaaaagttgtatcaaata 37690576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 131
Target Start/End: Complemental strand, 43755629 - 43755572
Alignment:
Q  74 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactcttt 131  Q
    |||||| | |||||||||| |||||| |||||| ||||||||||||||| ||||||||    
T  43755629 aaaaaaaaagttgtcacaagagttgtctcaaatggatgttcaaatatcattactcttt 43755572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 587000 - 587076
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||| | | |||| ||||||||| ||| |||||||||||||||||   |||||| |||||||||||||    
T  587000 cattgtttttgacaaataaaaacagagaaaaatgagattgtcacaaaagttgttagtaaatagttgttcaaatatca 587076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 25130804 - 25130880
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt-ttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||  | |||||||||| |||||||||    
T  25130804 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtcatgaaatagatgtacaaatatca 25130880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 37947190 - 37947114
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttc-aaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||| ||||||||| ||  |||||||| ||||||||||  | |||||| |||||||||||||    
T  37947190 cattgtttttgaccaatgagaagagagaacaacaaggttgtcccaaaagttgtaacaaaatagttgttcaaatatca 37947114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 47059860 - 47059784
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||||||||||||||  || ||||||  |||||||||  ||||| | |||||||||||||    
T  47059860 cattgtttttgaccaatgaaaagagagaaaaataagattgtcatgaaagttgttagcaaatggttgttcaaatatca 47059784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 11460895 - 11460970
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||| |||||||||| | |||||| ||| |||  ||||||||| ||||||||| |||||| | |||||||||||||    
T  11460895 cattatttttgaccaataaaaagaaagagaaagaaggttgtcaaaaaagttgtatcaaattgttgttcaaatatca 11460970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 25061834 - 25061909
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| |||| ||||||||||||||||  ||||||||| | |  |||| |||||| | |||||||||||||    
T  25061834 cattgtttttaaccaatgaaaagagagaaaaagaaggttgtcaaatagattgtatcaaatggttgttcaaatatca 25061909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 122
Target Start/End: Complemental strand, 25302614 - 25302539
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaat-agatgttcaaatatca 122  Q
    ||||||||| |||| ||||||||||||||||| | ||||||||| || |||| | |||| || |||||||||||||    
T  25302614 attgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacataaattgtctaaaatgagttgttcaaatatca 25302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 29264104 - 29264179
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||| ||||||||| | |||||||||| ||||||  || ||||| |||||||| || |||| |||||||||||||    
T  29264104 cattgattttgaccaataaaaagagagagaaaagaaattatcacataagttgttccacatagttgttcaaatatca 29264179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 50436247 - 50436305
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 107  Q
    ||||||||| |||| |||||| |||||| ||||| ||||||||||||||||| |||||||    
T  50436247 attgtttttaaccaatgaaaa-agagaataaagaagttgtcacaaaagttgtatcaaata 50436305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 122
Target Start/End: Complemental strand, 29254034 - 29253960
Alignment:
Q  49 ttgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    |||||||||| || ||| |||||||||||| ||||||||||   ||||||||  ||||||| |||||||||||||    
T  29254034 ttgtttttgatcaatgagaagagagaaaaaggaggttgtcattgaagttgttagcaaatagttgttcaaatatca 29253960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 29294055 - 29294122
Alignment:
Q  53 ttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||| ||||||||||||||| | |  |||||||| |||||||| || |||| |||||||||||||    
T  29294055 ttttgaccaatgaaaagagagaaaagaaa--ttgtcacataagttgttccacatagttgttcaaatatca 29294122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 128
Target Start/End: Original strand, 33676029 - 33676083
Alignment:
Q  74 aaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||| | ||||||||||||||| | | |||||| |||||||||||||||||||    
T  33676029 aaaaaaaaagttgtcacaaaagttttattaaatagttgttcaaatatcaatactc 33676083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 40605385 - 40605315
Alignment:
Q  53 ttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt-tcaaatagatgttcaaatatca 122  Q
    ||||||||| ||| ||||||||||||  ||||||||| ||||||||||  ||||| | |||||||||||||    
T  40605385 ttttgaccaatgagaagagagaaaaagaaggttgtcataaaagttgttagcaaatggttgttcaaatatca 40605315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 48325323 - 48325365
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca 89  Q
    ||||||||||||||| ||| |||||||||||| ||||||||||    
T  48325323 cattgtttttgaccaatgagaagagagaaaaaggaggttgtca 48325365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 89
Target Start/End: Complemental strand, 50528027 - 50527985
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca 89  Q
    ||||||||||||||| ||||||||||||||||  |||||||||    
T  50528027 cattgtttttgaccaatgaaaagagagaaaaagaaggttgtca 50527985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 6841892 - 6841973
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    ||||||||||||||| | ||||||||||||||  | |||||||  | ||||||   |||||| ||||||||||||| |||||    
T  6841892 cattgtttttgaccaataaaaagagagaaaaagaaagttgtcatgatagttgtcaaaaatagttgttcaaatatcagtactc 6841973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 129
Target Start/End: Original strand, 7423116 - 7423197
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||||||| | | || ||||||||   ||||||||||||||||||||  |||||| |||  |||||||| ||||||    
T  7423116 attgtttttgaccaataagaaaagagaaaaggaaggttgtcacaaaagttgttaaaaatagttgtataaatatcactactct 7423197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 13813659 - 13813712
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| |||||||||    
T  13813659 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgtt 13813712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 18959104 - 18959189
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaa-aaaagaggttgtcacaaaagttgtttcaaatagatgttc-aaatatcaatactctt 130  Q
    ||||||||||||||| ||||||||||||| |||| |  ||||| ||||| |||| |||||| | ||||| |||||||| |||||||    
T  18959104 cattgtttttgaccaatgaaaagagagaagaaaaaaaattgtcgcaaaaattgtatcaaatggttgttcaaaatatcactactctt 18959189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 29300553 - 29300496
Alignment:
Q  65 aaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||||| ||||||  |||||||| |||||||| || |||| |||||||||||||    
T  29300553 aaaagagagagaaaagaaattgtcacataagttgttccacatagttgttcaaatatca 29300496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 49 - 122
Target Start/End: Original strand, 44730747 - 44730820
Alignment:
Q  49 ttgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    |||||||| |||| |||||| |||||||||  ||||||||| ||| |||||  ||||| | |||||||||||||    
T  44730747 ttgtttttaaccaatgaaaaaagagaaaaagaaggttgtcaaaaaggttgtaccaaatggttgttcaaatatca 44730820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 134
Target Start/End: Complemental strand, 48872918 - 48872834
Alignment:
Q  50 tgtttttgaccattgaaaagagagaaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactcttttat 134  Q
    |||||||  ||| |||||||||||| |||| || ||||||| ||||||||| | |||| | ||||||||||||| |||||||||||    
T  48872918 tgtttttatccaatgaaaagagagagaaaaaag-ttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactcttttat 48872834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 10384629 - 10384673
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcaca 91  Q
    ||||||||||||||| ||||||||| || |||||| |||||||||    
T  10384629 cattgtttttgaccaatgaaaagagtgagaaaagaagttgtcaca 10384673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 15061946 - 15062030
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||  ||| | ||||||||||||||| | ||||||| |||||||| | | |||| | ||||||||||||| |||||||    
T  15061946 cattgtttttatccaataaaaagagagaaaaaaaaagttgtcaccaaaagttatatgaaatggttgttcaaatatcactactctt 15062030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 18610872 - 18610952
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||||||||||||| | ||||||||| |||   | ||||||||||||||||| | || ||  ||||||||||||| |||||    
T  18610872 attgtttttgaccaataaaaagagaggaaaggaaagttgtcacaaaagttgtcttaattaattgttcaaatatcactactc 18610952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 25995561 - 25995613
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | ||||||||||||||  |||||||||  ||||||||    
T  25995561 cattgtttttgaccaataaaaagagagaaaaataaggttgtcattaaagttgt 25995613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 31436921 - 31437002
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    ||||||||||||||| |||||  |||||||||| |  |||||||||||||| | ||| || | |||||||||| || |||||||    
T  31436921 cattgtttttgaccaatgaaa--agagaaaaaataaattgtcacaaaagttatctcatatggttgttcaaataacactactctt 31437002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 45042362 - 45042413
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| |||||||||| |||||| ||||| ||||| |||||||    
T  45042362 cattgtttttgaccaatgaaaagaga-aaaaaaaaggttatcacataagttgt 45042413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 49425838 - 49425919
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcaatactct 129  Q
    |||||||||| |||| ||||||||||||||||| |  || ||| |||||||||| | |||| | ||||||||||||| ||||||    
T  49425838 cattgtttttaaccaatgaaaagagagaaaaaaaa--ttatcaccaaaagttgtatgaaatggttgttcaaatatcactactct 49425919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 51703081 - 51703002
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatact 127  Q
    |||||||||| |||| |||||||| |||||||| |  || ||||||||||||| | |||| | ||||||||||||| ||||    
T  51703081 cattgtttttaaccaatgaaaaga-agaaaaaaaaaattatcacaaaagttgtctgaaatggttgttcaaatatcactact 51703002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 11293 - 11353
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 107  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11293 cattgtttttgaccaatgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata 11353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 18105 - 18187
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||| |||| ||||||||||||||||| || |||||| ||||||||| |||||||| ||||||||||||| |||||||    
T  18105 cattgtttttaaccaatgaaaagagagaaaaaaaag-ttgtcataaaagttgtatcaaatagttgttcaaatatcactactctt 18187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 130
Target Start/End: Complemental strand, 15158 - 15076
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||||||||| |||| |||||| ||||||||| || |||||||||||||||||  ||||||| ||||||||||||| |||||||    
T  15158 cattgtttttaaccaatgaaaaaagagaaaaa-gaagttgtcacaaaagttgtaccaaatagttgttcaaatatcactactctt 15076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 11506 - 11421
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||||||||| ||||||| ||||||||| |  ||||  |||||||||| | |||||| ||||||||||||| |||||||||    
T  11506 cattgtttttgaccaatgaaaagtgagaaaaaataaattgtatcaaaagttgtctaaaatagttgttcaaatatcactactctttt 11421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 121
Target Start/End: Original strand, 6529 - 6602
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatc 121  Q
    ||||||||||| || ||||||||||||||||||| ||| |||| | |||||| |||||| ||||||||||||||    
T  6529 attgtttttgatcaatgaaaagagagaaaaaagaagttatcacgagagttgtctcaaatggatgttcaaatatc 6602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Complemental strand, 147226 - 147174
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| | | ||||||||||||  |||||||||| ||||||||    
T  147226 cattgtttttgaccaataagaagagagaaaaacaaggttgtcactaaagttgt 147174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 119
Target Start/End: Complemental strand, 10486 - 10414
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaata 119  Q
    ||||||||||||||| |||||||||||| |||| | ||||||||||||||||| ||| || | ||||||||||    
T  10486 cattgtttttgaccaatgaaaagagagagaaaataagttgtcacaaaagttgtctcatatggttgttcaaata 10414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 130
Target Start/End: Original strand, 36100 - 36186
Alignment:
Q  47 cattgtttttgaccattgaaaagagag--aaaaaagaggttgtcac-aaaagttgtttcaaatagatgttcaaatatcaatactctt 130  Q
    |||| |||||||||| |||||||||||  |||||| | |||||||| ||||||||| |||||| | ||||||||||||| |||||||    
T  36100 cattatttttgaccaatgaaaagagagaaaaaaaacaagttgtcacaaaaagttgtatcaaatggttgttcaaatatcactactctt 36186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 190855 - 190780
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| | ||||  |||||||||||  || |||||||| |||||||||||| || |||||||||||    
T  190855 cattgtttttgaccaataaaaaatgagaaaaaagaaattatcacaaaaattgtttcaaataaatattcaaatatca 190780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 98
Target Start/End: Complemental strand, 9817 - 9767
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttg 98  Q
    |||||||||||||| |||||||||| |||||| | ||||||||||||||||    
T  9817 attgtttttgaccaatgaaaagagaaaaaaaataagttgtcacaaaagttg 9767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 219634 - 219552
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaata-gatgttcaaatatcaatactc 128  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||| || |||| | || || | ||||||||||||| |||||    
T  219634 cattgtttttgaccaatgaaaagagagagaaaagaagttgtcacataaattgtctaaagtatgttgttcaaatatcactactc 219552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 31570 - 31517
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtt 100  Q
    |||||||||| |||| ||||||||||||||||| | |||||||||||| |||||    
T  31570 cattgtttttaaccaatgaaaagagagaaaaaaaaagttgtcacaaaaattgtt 31517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 119935 - 120019
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttt 132  Q
    ||||||||| |||| |||||||||||||||||||  ||| ||||  ||| || |||||| | |||| |||||||| |||||||||    
T  119935 attgttttttaccaatgaaaagagagaaaaaagaaattgccacagtagtagtatcaaatggttgtttaaatatcactactctttt 120019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 16564 - 16489
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||| ||||||||||  || |||||| |||||||||  ||||| | |||| ||||||||    
T  16564 cattgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttgtaccaaatggttgttgaaatatca 16489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 56280 - 56355
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatca 122  Q
    ||||||||||||||| ||||| ||||||||||  || |||||| |||||||||  ||||| | |||| ||||||||    
T  56280 cattgtttttgaccaatgaaacgagagaaaaagaagattgtcaaaaaagttgtaccaaatggttgttgaaatatca 56355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 99
Target Start/End: Original strand, 17139 - 17191
Alignment:
Q  47 cattgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgt 99  Q
    ||||||||||||||| ||||||||||| | |   |||||||||||||||||||    
T  17139 cattgtttttgaccaatgaaaagagagcacatcaaggttgtcacaaaagttgt 17191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 34942 - 35022
Alignment:
Q  53 ttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactctttta 133  Q
    ||||||||| |||||||||||||||   ||||||||| | | |||||  ||||| | ||||||||||||| | ||||||||    
T  34942 ttttgaccaatgaaaagagagaaaatgaaggttgtcaaataggttgtaccaaatggttgttcaaatatcattgctctttta 35022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Original strand, 9553 - 9633
Alignment:
Q  48 attgtttttgaccattgaaaagagagaaaaaagaggttgtcacaaaagttgtttcaaatagatgttcaaatatcaatactc 128  Q
    |||| ||||||||| | |||||||||||||  || ||| |||| |||| ||| ||| |||| ||||||||||||| |||||    
T  9553 attgattttgaccaataaaaagagagaaaatggaagttatcaccaaagctgtctcatatagttgttcaaatatcactactc 9633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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