View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0848-Insertion-2 (Length: 232)
Name: NF0848-Insertion-2
Description: NF0848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0848-Insertion-2 |
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Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 8 - 228
Target Start/End: Original strand, 29220536 - 29220756
Alignment:
| Q |
8 |
aaaggtttgtcaatatgccacaatccaaccatgtgaaggttaaagaaagatttcccaaacaatactcgcattacgattgaaatggacgccttagaaaaac |
107 |
Q |
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| T |
29220536 |
aaaggtttgtcaatatgccacaatccaaccatgcgaaggttaaagaaagatttcccaaacaatagtcgcattacgattgaaatggacgccttagaaaaac |
29220635 |
T |
|
| Q |
108 |
agtcaagataaatatgaactgtgtcgaatgtccggacatatccgcaaatattatccttagaaaattggctttgctacttagttggaagtagannnnnnna |
207 |
Q |
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||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
29220636 |
agttaagataaatatgaactgtgtcgaatgtccggtcatatccgcaaatattatccttagaaaattggctttgctacttagttggaagtagattttttta |
29220735 |
T |
|
| Q |
208 |
gatgtcacgattagcatcgtt |
228 |
Q |
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||||||||||||||||||||| |
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| T |
29220736 |
gatgtcacgattagcatcgtt |
29220756 |
T |
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