View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0848_high_4 (Length: 472)

Name: NF0848_high_4
Description: NF0848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0848_high_4
NF0848_high_4
[»] chr7 (40 HSPs)
chr7 (83-352)||(29403603-29403872)
chr7 (350-470)||(8076644-8076764)
chr7 (350-463)||(9650340-9650453)
chr7 (350-470)||(27256831-27256951)
chr7 (350-470)||(40864743-40864863)
chr7 (349-470)||(16459760-16459881)
chr7 (349-470)||(20488542-20488663)
chr7 (363-470)||(20485181-20485288)
chr7 (349-470)||(14928015-14928136)
chr7 (349-470)||(15351481-15351602)
chr7 (349-470)||(18426521-18426642)
chr7 (350-470)||(19640893-19641013)
chr7 (350-453)||(8954647-8954750)
chr7 (349-470)||(14259600-14259721)
chr7 (349-470)||(45169310-45169431)
chr7 (350-470)||(838812-838932)
chr7 (350-470)||(1203992-1204112)
chr7 (400-470)||(47102133-47102203)
chr7 (350-470)||(19096848-19096969)
chr7 (350-470)||(845988-846108)
chr7 (350-470)||(853365-853485)
chr7 (350-470)||(1211369-1211489)
chr7 (363-464)||(36477577-36477671)
chr7 (377-470)||(29727211-29727304)
chr7 (349-470)||(32302433-32302554)
chr7 (350-432)||(9008789-9008871)
chr7 (350-470)||(16580823-16580943)
chr7 (363-432)||(10499497-10499566)
chr7 (363-432)||(10504526-10504595)
chr7 (363-446)||(11017474-11017557)
chr7 (363-432)||(10532226-10532295)
chr7 (350-429)||(15566012-15566089)
chr7 (426-470)||(26341826-26341870)
chr7 (350-432)||(13343809-13343891)
chr7 (350-408)||(18385144-18385202)
chr7 (367-430)||(2629290-2629353)
chr7 (350-410)||(1043873-1043933)
chr7 (350-404)||(11297413-11297467)
chr7 (363-431)||(10488691-10488759)
chr7 (350-382)||(47102211-47102243)
[»] chr5 (28 HSPs)
chr5 (350-470)||(36936891-36937011)
chr5 (350-470)||(36941645-36941765)
chr5 (350-470)||(41997258-41997378)
chr5 (350-470)||(42002027-42002147)
chr5 (356-470)||(557290-557404)
chr5 (350-470)||(32460924-32461044)
chr5 (356-470)||(562062-562176)
chr5 (350-470)||(13300870-13300990)
chr5 (350-470)||(31732131-31732251)
chr5 (350-470)||(21323356-21323476)
chr5 (350-453)||(23976967-23977070)
chr5 (349-470)||(10754044-10754165)
chr5 (350-470)||(12044510-12044635)
chr5 (350-470)||(21826817-21826937)
chr5 (350-470)||(26869694-26869814)
chr5 (350-468)||(8770839-8770958)
chr5 (350-470)||(3666509-3666627)
chr5 (350-454)||(36949395-36949499)
chr5 (351-470)||(24435564-24435683)
chr5 (363-412)||(15395233-15395282)
chr5 (426-470)||(26667897-26667941)
chr5 (426-470)||(26939494-26939538)
chr5 (426-470)||(29167405-29167449)
chr5 (350-424)||(41099170-41099244)
chr5 (428-470)||(36430230-36430272)
chr5 (426-470)||(7452372-7452416)
chr5 (426-470)||(36424257-36424301)
chr5 (428-463)||(6154867-6154902)
[»] chr3 (46 HSPs)
chr3 (350-470)||(3034237-3034357)
chr3 (350-470)||(3693212-3693332)
chr3 (350-470)||(8888524-8888644)
chr3 (350-470)||(3673180-3673300)
chr3 (350-470)||(8070273-8070393)
chr3 (350-470)||(8883764-8883884)
chr3 (350-470)||(10585570-10585690)
chr3 (349-470)||(9706970-9707091)
chr3 (349-470)||(16749299-16749420)
chr3 (349-470)||(19776479-19776600)
chr3 (350-470)||(6595773-6595893)
chr3 (350-470)||(18350155-18350275)
chr3 (366-470)||(4106722-4106826)
chr3 (366-470)||(4110574-4110678)
chr3 (350-470)||(8223529-8223649)
chr3 (366-470)||(15965649-15965753)
chr3 (366-470)||(15969573-15969677)
chr3 (366-470)||(15973497-15973601)
chr3 (349-453)||(22758559-22758663)
chr3 (350-470)||(45903925-45904045)
chr3 (350-468)||(8197048-8197166)
chr3 (349-470)||(8488770-8488890)
chr3 (350-467)||(14425223-14425340)
chr3 (350-470)||(29822-29942)
chr3 (349-470)||(37438939-37439060)
chr3 (363-454)||(51922944-51923035)
chr3 (392-470)||(18699200-18699278)
chr3 (350-432)||(35456320-35456401)
chr3 (365-463)||(53358703-53358805)
chr3 (350-436)||(47540899-47540985)
chr3 (351-463)||(16055777-16055889)
chr3 (426-470)||(18467831-18467875)
chr3 (426-470)||(32473456-32473500)
chr3 (426-470)||(39775160-39775204)
chr3 (350-412)||(11997387-11997448)
chr3 (350-424)||(12899123-12899197)
chr3 (409-470)||(14671987-14672048)
chr3 (376-436)||(429057-429117)
chr3 (426-470)||(14438132-14438176)
chr3 (363-463)||(16043103-16043202)
chr3 (426-470)||(18472625-18472669)
chr3 (350-405)||(16023191-16023246)
chr3 (350-403)||(49020114-49020167)
chr3 (363-411)||(16048646-16048694)
chr3 (361-413)||(47540520-47540572)
chr3 (363-412)||(18011992-18012041)
[»] scaffold0182 (1 HSPs)
scaffold0182 (350-463)||(9260-9373)
[»] chr8 (24 HSPs)
chr8 (350-470)||(4237721-4237841)
chr8 (350-470)||(4242460-4242580)
chr8 (350-470)||(31449245-31449365)
chr8 (350-470)||(8330743-8330863)
chr8 (350-470)||(43302064-43302184)
chr8 (353-470)||(37772301-37772418)
chr8 (350-470)||(25367366-25367486)
chr8 (350-470)||(34818086-34818206)
chr8 (350-470)||(4582676-4582796)
chr8 (349-470)||(21384338-21384459)
chr8 (349-470)||(21387758-21387879)
chr8 (349-470)||(21411617-21411738)
chr8 (349-470)||(21806109-21806230)
chr8 (366-470)||(18861966-18862070)
chr8 (350-470)||(19393111-19393231)
chr8 (363-470)||(23915086-23915193)
chr8 (350-467)||(22104272-22104389)
chr8 (366-470)||(21827335-21827439)
chr8 (350-464)||(16066597-16066711)
chr8 (380-454)||(25733575-25733649)
chr8 (350-436)||(14036083-14036169)
chr8 (350-404)||(17153198-17153252)
chr8 (350-404)||(17157432-17157486)
chr8 (371-436)||(15197266-15197331)
[»] chr2 (24 HSPs)
chr2 (350-470)||(10160100-10160220)
chr2 (350-470)||(25375483-25375603)
chr2 (350-470)||(34070013-34070133)
chr2 (349-470)||(23068132-23068253)
chr2 (350-470)||(28855725-28855844)
chr2 (358-470)||(30658771-30658883)
chr2 (349-470)||(1284108-1284229)
chr2 (350-470)||(22844996-22845116)
chr2 (350-470)||(377670-377790)
chr2 (350-470)||(24292842-24292962)
chr2 (366-470)||(30344312-30344416)
chr2 (350-470)||(7559730-7559851)
chr2 (350-463)||(26897228-26897341)
chr2 (354-470)||(6297277-6297392)
chr2 (350-470)||(6856791-6856911)
chr2 (350-470)||(24286274-24286394)
chr2 (349-463)||(9785751-9785863)
chr2 (350-470)||(42248821-42248941)
chr2 (350-464)||(30635393-30635510)
chr2 (351-412)||(17327712-17327773)
chr2 (426-470)||(18345030-18345074)
chr2 (428-470)||(17968397-17968439)
chr2 (350-432)||(17452966-17453053)
chr2 (350-404)||(30641491-30641545)
[»] chr1 (32 HSPs)
chr1 (350-470)||(3094683-3094803)
chr1 (350-470)||(40232768-40232888)
chr1 (350-470)||(41097338-41097458)
chr1 (350-470)||(13893910-13894030)
chr1 (350-470)||(17213824-17213944)
chr1 (349-470)||(39243402-39243523)
chr1 (349-470)||(39246957-39247078)
chr1 (350-470)||(1067075-1067195)
chr1 (350-470)||(52100602-52100721)
chr1 (349-470)||(41387354-41387475)
chr1 (350-470)||(14804098-14804218)
chr1 (350-470)||(22428576-22428695)
chr1 (350-463)||(21498252-21498365)
chr1 (366-470)||(1924450-1924554)
chr1 (366-470)||(20923464-20923568)
chr1 (350-470)||(26198952-26199072)
chr1 (350-449)||(14819587-14819686)
chr1 (350-470)||(19725286-19725404)
chr1 (377-470)||(33055630-33055723)
chr1 (350-470)||(2367637-2367757)
chr1 (382-470)||(16836698-16836786)
chr1 (350-470)||(2384626-2384746)
chr1 (350-410)||(8267232-8267292)
chr1 (350-463)||(19726967-19727079)
chr1 (426-470)||(26927153-26927197)
chr1 (386-464)||(26319589-26319667)
chr1 (426-470)||(10135944-10135988)
chr1 (350-431)||(23285219-23285300)
chr1 (351-431)||(23254568-23254648)
chr1 (428-470)||(10140712-10140754)
chr1 (419-453)||(18784002-18784036)
chr1 (425-470)||(51040942-51040987)
[»] scaffold0060 (2 HSPs)
scaffold0060 (350-470)||(47353-47473)
scaffold0060 (350-470)||(52297-52417)
[»] chr4 (34 HSPs)
chr4 (350-470)||(3997442-3997562)
chr4 (350-467)||(7902491-7902608)
chr4 (350-463)||(13521365-13521478)
chr4 (350-470)||(34561018-34561138)
chr4 (350-470)||(15225759-15225879)
chr4 (350-470)||(47575256-47575375)
chr4 (355-452)||(31297880-31297977)
chr4 (349-470)||(15011195-15011316)
chr4 (349-470)||(12488392-12488513)
chr4 (350-470)||(41817376-41817509)
chr4 (350-470)||(14868448-14868568)
chr4 (350-470)||(14877366-14877486)
chr4 (350-470)||(14898996-14899116)
chr4 (349-470)||(10713534-10713655)
chr4 (349-470)||(10927304-10927425)
chr4 (350-470)||(9185064-9185184)
chr4 (366-470)||(14953451-14953555)
chr4 (350-470)||(8660783-8660903)
chr4 (350-470)||(9190929-9191049)
chr4 (366-470)||(25690588-25690692)
chr4 (350-470)||(26034782-26034902)
chr4 (367-470)||(39320156-39320259)
chr4 (409-470)||(18023215-18023276)
chr4 (350-431)||(26188048-26188129)
chr4 (426-470)||(5270856-5270900)
chr4 (426-470)||(5927650-5927694)
chr4 (367-430)||(52742621-52742684)
chr4 (363-432)||(43477410-43477477)
chr4 (368-412)||(32545535-32545579)
chr4 (361-436)||(55073774-55073849)
chr4 (428-470)||(30564184-30564226)
chr4 (432-470)||(31728803-31728841)
chr4 (426-470)||(8694332-8694376)
chr4 (426-470)||(31766490-31766534)
[»] scaffold0061 (1 HSPs)
scaffold0061 (350-470)||(49364-49484)
[»] scaffold0017 (1 HSPs)
scaffold0017 (350-470)||(149150-149270)
[»] chr6 (26 HSPs)
chr6 (350-470)||(6112139-6112259)
chr6 (363-465)||(24588571-24588673)
chr6 (349-470)||(15704290-15704411)
chr6 (350-470)||(16625010-16625130)
chr6 (349-470)||(19772391-19772512)
chr6 (349-470)||(27324440-27324559)
chr6 (349-470)||(2077406-2077527)
chr6 (349-470)||(22806945-22807066)
chr6 (349-452)||(31477083-31477186)
chr6 (349-470)||(16760976-16761098)
chr6 (366-470)||(22949826-22949930)
chr6 (366-470)||(22953782-22953886)
chr6 (366-470)||(23872270-23872374)
chr6 (366-470)||(23876226-23876330)
chr6 (363-470)||(14073729-14073836)
chr6 (353-470)||(26981189-26981306)
chr6 (350-470)||(27073579-27073699)
chr6 (350-432)||(15991075-15991157)
chr6 (350-470)||(18387526-18387646)
chr6 (426-470)||(17963991-17964035)
chr6 (350-436)||(2862852-2862938)
chr6 (350-412)||(2759756-2759818)
chr6 (363-436)||(15640938-15641011)
chr6 (349-405)||(14322789-14322845)
chr6 (431-470)||(5600745-5600784)
chr6 (428-470)||(11956474-11956516)
[»] scaffold0041 (1 HSPs)
scaffold0041 (350-470)||(35084-35204)
[»] scaffold0357 (1 HSPs)
scaffold0357 (350-470)||(3727-3847)
[»] scaffold0327 (1 HSPs)
scaffold0327 (350-470)||(19602-19722)
[»] scaffold0070 (2 HSPs)
scaffold0070 (350-470)||(59020-59140)
scaffold0070 (350-408)||(63284-63342)
[»] scaffold0020 (1 HSPs)
scaffold0020 (350-470)||(620-740)
[»] scaffold0011 (1 HSPs)
scaffold0011 (363-470)||(126997-127104)
[»] scaffold0572 (1 HSPs)
scaffold0572 (349-470)||(10355-10476)
[»] scaffold0452 (1 HSPs)
scaffold0452 (349-470)||(12347-12468)
[»] scaffold0431 (1 HSPs)
scaffold0431 (349-470)||(14856-14977)
[»] scaffold0018 (1 HSPs)
scaffold0018 (349-470)||(21901-22022)
[»] scaffold0009 (1 HSPs)
scaffold0009 (350-454)||(71741-71846)
[»] scaffold0205 (1 HSPs)
scaffold0205 (350-454)||(30877-30981)
[»] scaffold0132 (1 HSPs)
scaffold0132 (350-470)||(24676-24796)
[»] scaffold0019 (1 HSPs)
scaffold0019 (350-454)||(30294-30398)
[»] scaffold0015 (2 HSPs)
scaffold0015 (350-470)||(193647-193767)
scaffold0015 (350-470)||(187962-188081)
[»] scaffold0144 (1 HSPs)
scaffold0144 (349-463)||(7478-7592)
[»] scaffold0628 (1 HSPs)
scaffold0628 (349-470)||(6982-7103)
[»] scaffold0229 (1 HSPs)
scaffold0229 (349-470)||(10805-10926)
[»] scaffold0157 (1 HSPs)
scaffold0157 (349-470)||(31964-32085)
[»] scaffold0141 (1 HSPs)
scaffold0141 (349-470)||(13391-13512)
[»] scaffold0124 (1 HSPs)
scaffold0124 (349-470)||(21365-21486)
[»] scaffold0034 (1 HSPs)
scaffold0034 (349-454)||(121176-121281)
[»] scaffold0031 (1 HSPs)
scaffold0031 (349-470)||(35390-35511)
[»] scaffold1910 (1 HSPs)
scaffold1910 (350-470)||(460-580)
[»] scaffold0044 (2 HSPs)
scaffold0044 (350-470)||(81152-81272)
scaffold0044 (350-470)||(64754-64874)
[»] scaffold0575 (1 HSPs)
scaffold0575 (363-470)||(5274-5381)
[»] scaffold0415 (1 HSPs)
scaffold0415 (366-470)||(1082-1186)
[»] scaffold0292 (1 HSPs)
scaffold0292 (363-470)||(7761-7868)
[»] scaffold0004 (1 HSPs)
scaffold0004 (366-470)||(199786-199888)
[»] scaffold0008 (1 HSPs)
scaffold0008 (350-432)||(256444-256526)
[»] scaffold0155 (1 HSPs)
scaffold0155 (402-470)||(22269-22337)
[»] scaffold0096 (1 HSPs)
scaffold0096 (401-448)||(22325-22372)
[»] scaffold0478 (1 HSPs)
scaffold0478 (350-436)||(8215-8301)
[»] scaffold0932 (1 HSPs)
scaffold0932 (351-436)||(1020-1105)
[»] scaffold0232 (2 HSPs)
scaffold0232 (370-431)||(22583-22644)
scaffold0232 (426-470)||(11788-11832)
[»] scaffold0035 (1 HSPs)
scaffold0035 (363-407)||(6910-6954)
[»] scaffold0720 (1 HSPs)
scaffold0720 (350-404)||(5931-5985)
[»] scaffold0131 (1 HSPs)
scaffold0131 (352-436)||(8261-8344)


Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 83 - 352
Target Start/End: Complemental strand, 29403872 - 29403603
Alignment:
Q  83 gaacctgtgtcaaattttatgtgcttgcgaaaagggggaaatgttcttataaactgagtttggctctaaaataaacaagtccatctaagactgatttgaa 182  Q
    |||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29403872 gaacctgtgtcaaattttatgtgcttgcaaaatgggggaaatgttcttataaactgagtttggctctaaaataaacaagtccatctaagactgatttgaa 29403773  T
Q  183 atgtattgtaatttcatctcactataatattaatgtagatattcctttgcttactttagatgcaaactcactttagaggtattttctatacagaaggtga 282  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29403772 atgtattgtaatttcatctcactataatattaatgtagatattcctttgcttactttagatgcaaactcactttagaggtattttttatacagaaggtga 29403673  T
Q  283 gaagttaaaatgaagaccacggttgttggtgaaaacttccatggtatctctttcgctatacatctccatt 352  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  29403672 gaagttaaaatgaaggccacggtttttggtgaaaacttccatggtatctctttctctatacatctccatt 29403603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 8076764 - 8076644
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8076764 attacttgctcccaaagtttctcacttattagatgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 8076665  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||  |||||||||||||||    
T  8076664 cttcatgtgtttttcctctct 8076644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 9650340 - 9650453
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  9650340 attacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattccacaaatcgaaattcacagttgatg 9650439  T
Q  450 cttccagtgttttt 463  Q
    ||||| ||||||||    
T  9650440 cttcctgtgttttt 9650453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 27256951 - 27256831
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| | ||||||||||||||||||||||    
T  27256951 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgctttcgatacaccgaaattcacagttgatg 27256852  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  27256851 cttcctgtgcttttcctctct 27256831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 40864743 - 40864863
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||||||||||||||||||    
T  40864743 attacttgctcccaaagttactcacttattagttgtgaactttctctataaatagagagctcacacagtactttcgatacaccgaaattcacagttgatg 40864842  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  40864843 cttcctgtgcttttcctctct 40864863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 16459760 - 16459881
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| || ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  16459760 cattacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 16459859  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  16459860 gcttcctgtgcttttcttctct 16459881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 20488663 - 20488542
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  20488663 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 20488564  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||  ||| ||||| |||||    
T  20488563 gcttcgtgtgcttttcttctct 20488542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 20485288 - 20485181
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 462  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||  ||| |||    
T  20485288 aaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcgtgtgcttt 20485189  T
Q  463 tcctctct 470  Q
    || |||||    
T  20485188 tcttctct 20485181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 14928015 - 14928136
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||  |||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||    
T  14928015 cattacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattctacacaccgaaattcacagttgat 14928114  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  14928115 gcttcctgtgcttttcttctct 14928136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 15351481 - 15351602
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||  |||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||    
T  15351481 cattacttgtttccaaagtttctcacttattagttgtaaaccatctctataaatagaggactcacacagtgcattctacacaccgaaattcacagttgat 15351580  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  15351581 gcttcctgtgcttttcttctct 15351602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 18426642 - 18426521
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  18426642 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 18426543  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||| ||| ||||| |||||    
T  18426542 acttcctgtgcttttcttctct 18426521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 19641013 - 19640893
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||| |  || | ||| | ||||||||||||||||||||||    
T  19641013 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagtgttcacattgttctttcgatacaccgaaattcacagttgatg 19640914  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||  ||| |||||||||||    
T  19640913 cttcttgtgcttttcctctct 19640893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 350 - 453
Target Start/End: Original strand, 8954647 - 8954750
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||  || ||||||||| |||||||||    
T  8954647 attacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattccgaaccccgaaattcccagttgatg 8954746  T
Q  450 cttc 453  Q
    ||||    
T  8954747 cttc 8954750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 14259721 - 14259600
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| ||||   ||||||||||||||||    
T  14259721 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacactttgaaattcacagttgat 14259622  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  14259621 gcttcctgtgcttttcttctct 14259600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 45169310 - 45169431
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||| ||||| |||||||||||||||||||||||    
T  45169310 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacaccgaaattcacagttgat 45169409  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||| ||| ||||| |||||    
T  45169410 acttcctgtgcttttcttctct 45169431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 838812 - 838932
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||| |||||||   || ||||||||||| |||||||    
T  838812 attacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgatg 838911  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||| ||||||    
T  838912 cttcctgtgttttttctctct 838932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 1203992 - 1204112
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||||||||| ||| |||||||   || ||||||||||| |||||||    
T  1203992 attacttgttcccaaagtttctcacctattagttgcgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacggttgatg 1204091  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||| ||||||    
T  1204092 cttcctgtgttttttctctct 1204112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 400 - 470
Target Start/End: Complemental strand, 47102203 - 47102133
Alignment:
Q  400 aatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  47102203 aatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctgtgtttttcctctct 47102133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 19096969 - 19096848
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccg-aaattcacagttgat 448  Q
    |||||||| ||  |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||   || ||| |||||||||||||||    
T  19096969 attacttgttcgcaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaaattcacagttgat 19096870  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||  |||||||||||||||    
T  19096869 gcttcatgtgtttttcctctct 19096848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 845988 - 846108
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||| ||||||| | || ||||||||||  |||||||    
T  845988 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatg 846087  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||| ||||||    
T  846088 cttcctgtgctttttctctct 846108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 853365 - 853485
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||| ||||||| | || ||||||||||  |||||||    
T  853365 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatg 853464  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||| ||||||    
T  853465 cttcctgtgctttttctctct 853485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 1211369 - 1211489
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||| ||||||| | || ||||||||||  |||||||    
T  1211369 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagttcacacaatgcattctagaccccgaaattcatggttgatg 1211468  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||| ||||||    
T  1211469 cttcctgtgctttttctctct 1211489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 363 - 464
Target Start/End: Complemental strand, 36477671 - 36477577
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 462  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||       |||||||||||||||||||||||||||| |||||||    
T  36477671 aaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatg-------cacaccgaaattcacagttgatgcttcctgtgtttt 36477579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 377 - 470
Target Start/End: Original strand, 29727211 - 29727304
Alignment:
Q  377 attagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||||| ||||||||||||||||||||||| || ||||||||   ||||| |||||||||||||||| |||| ||| |||||||||||    
T  29727211 attagttgtgaattttctctataaatagagagctcacacggtgcattctggacaccaaaattcacagttgatgtttcctgtgcttttcctctct 29727304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 32302554 - 32302433
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||| ||||||||||||||||||| |||| |||||||||||| ||| || | |  |||||||| |||||||||||||||||||||||    
T  32302554 cattacttgtttccaaaatttctcacttattagttgtaaactatctctataaatatagaactgacatggtgcattctacacaccgaaattcacagttgat 32302455  T
Q  449 gcttccagtgtttttcctctct 470  Q
    | |||| ||| ||||| |||||    
T  32302454 gtttcctgtgcttttcttctct 32302433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 432
Target Start/End: Complemental strand, 9008871 - 9008789
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 432  Q
    |||| ||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||  | || ||||||||||||||    
T  9008871 attatttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctctcatagcgcattccacacacc 9008789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 16580943 - 16580823
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| | | |||||||||||||||||| |||| |||| || | |||||||| || |||| ||||||||||  ||||| ||||||||||||||||||    
T  16580943 attacttgtttccaaagtttctcacttattaattgtaaactatcccaataaatagggaactcacacagtgcattgtacacaacgaaattcacagttgatg 16580844  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||  ||| ||||| |||||    
T  16580843 cttcatgtgcttttcttctct 16580823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 10499497 - 10499566
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 432  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||    |||||||||||||||||    
T  10499497 aaagtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacacc 10499566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 10504526 - 10504595
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 432  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||    |||||||||||||||||    
T  10504526 aaagtttctcacttattagttgtgaattttctctataaatagagaactctggtagtgcattccacacacc 10504595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 363 - 446
Target Start/End: Original strand, 11017474 - 11017557
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttg 446  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||| ||   |||| ||||| |  ||||||||||||||||||    
T  11017474 aaagtttctcacttattagttgtgaattttctatataaatagagaggtcgcgcagtacattctatccaccgaaattcacagttg 11017557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 10532226 - 10532295
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 432  Q
    |||||||||||||||||||||||||| ||||||||||| ||||||  |||   |||||||||||||||||    
T  10532226 aaagtttctcacttattagttgtgaattttctctataagtagagaattcacgtagtgcattccacacacc 10532295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 350 - 429
Target Start/End: Complemental strand, 15566089 - 15566012
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacac 429  Q
    |||||||| ||| |||||||||||| ||||||||||||  ||||| |||||||  |||||||||||||| ||||||||||    
T  15566089 attacttgttccaaaagtttctcacatattagttgtgagttttctatataaat--agagctcatacagttcattccacac 15566012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 26341870 - 26341826
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  26341870 acacaccgaaattcacagttgatgcttcctgtgtttttcctctct 26341826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 13343809 - 13343891
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 432  Q
    |||| ||| ||| |||||||||| ||||||||||||||| ||||||||||||||| || ||||   | |||||||||||||||    
T  13343809 attaattgttcccaaagtttctctcttattagttgtgaattttctctataaatagtgaactcaggtaatgcattccacacacc 13343891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 18385202 - 18385144
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagag 408  Q
    |||||||| ||| |||||||||||| ||| | |||||||||||||||||||||||||||    
T  18385202 attacttgttccaaaagtttctcacgtatcaattgtgaactttctctataaatagagag 18385144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 430
Target Start/End: Complemental strand, 2629353 - 2629290
Alignment:
Q  367 tttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacaca 430  Q
    |||||||| |||||||||| || |||||||||||||| |||||||| | ||| |||||||||||    
T  2629353 tttctcacatattagttgtaaattttctctataaatatagagctcacatagttcattccacaca 2629290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 1043933 - 1043873
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagct 410  Q
    |||||||| | | |||||||||||| ||||| ||||||| |||||||||||||| ||||||    
T  1043933 attacttgtttccaaagtttctcacatattaattgtgaattttctctataaataaagagct 1043873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 11297467 - 11297413
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatag 404  Q
    |||||||| ||  |||||||||||| ||||||||||||  |||||||||||||||    
T  11297467 attacttgttcacaaagtttctcacatattagttgtgatttttctctataaatag 11297413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 363 - 431
Target Start/End: Original strand, 10488691 - 10488759
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacac 431  Q
    ||||||||||   ||||||||||||  ||| | |||||||| |||||||||| ||| ||||||||||||    
T  10488691 aaagtttctcctatattagttgtgatttttttttataaatatagagctcatatagttcattccacacac 10488759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 350 - 382
Target Start/End: Complemental strand, 47102243 - 47102211
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagt 382  Q
    |||||||||||| ||||||||||||||||||||    
T  47102243 attacttgctcccaaagtttctcacttattagt 47102211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 109; Significance: 1e-54; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 36936891 - 36937011
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36936891 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 36936990  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  36936991 cttcctgtgtttttcctctct 36937011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 36941645 - 36941765
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  36941645 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccatacaccgaaattcacagttgatg 36941744  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  36941745 cttcctgtgtttttcctctct 36941765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 41997378 - 41997258
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  41997378 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 41997279  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||||||||| |||||    
T  41997278 cttcctgtgtttttcttctct 41997258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 42002147 - 42002027
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  42002147 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 42002048  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||||||||| |||||    
T  42002047 cttcctgtgtttttcttctct 42002027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 356 - 470
Target Start/End: Complemental strand, 557404 - 557290
Alignment:
Q  356 tgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttcca 455  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  557404 tgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 557305  T
Q  456 gtgtttttcctctct 470  Q
    |||||||||||||||    
T  557304 gtgtttttcctctct 557290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 32460924 - 32461044
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  32460924 attacttgctcctaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacaatgcattccatacaccgaaattcacagttgatg 32461023  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  32461024 cttcctgtgtttttcctctct 32461044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 356 - 470
Target Start/End: Complemental strand, 562176 - 562062
Alignment:
Q  356 tgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttcca 455  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  562176 tgctcccaaagtttcttacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcct 562077  T
Q  456 gtgtttttcctctct 470  Q
    |||||||||||||||    
T  562076 gtgtttttcctctct 562062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 13300870 - 13300990
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  13300870 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacaccgaaattcacagttgatg 13300969  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||  ||| |||||||||||    
T  13300970 cttcatgtgcttttcctctct 13300990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 31732251 - 31732131
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||    
T  31732251 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatg 31732152  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  31732151 cttcctgtgcttttcctctct 31732131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 21323356 - 21323476
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||||    
T  21323356 attacttgcttccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgttttccatacaccgaaattcacagttgatg 21323455  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||  |||||||||||    
T  21323456 cttcctgtacttttcctctct 21323476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 350 - 453
Target Start/End: Original strand, 23976967 - 23977070
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  23976967 attacttgctcccaaagtttctcacttattagtagtgaactttctctataaatagagagctcacacagtgcattccatacactgaaattcacagttgatg 23977066  T
Q  450 cttc 453  Q
    ||||    
T  23977067 cttc 23977070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 10754165 - 10754044
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10754165 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10754066  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  10754065 gcttcctgtgcttttcttctct 10754044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 12044510 - 12044635
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcata-----cagtgcattccacacaccgaaattcacagt 444  Q
    |||||||||||| ||||||| |||||||||||||||||| |||||||| ||| |||||||||| |     |||||||||||||||||||||||||| |||    
T  12044510 attacttgctcccaaagtttttcacttattagttgtgaattttctctagaaaaagagagctcacacacagcagtgcattccacacaccgaaattcaaagt 12044609  T
Q  445 tgatgcttccagtgtttttcctctct 470  Q
    |||||||||| |||||||||||||||    
T  12044610 tgatgcttcctgtgtttttcctctct 12044635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 21826937 - 21826817
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||    
T  21826937 attacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctacaccccgaaattcacagttgatg 21826838  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  21826837 attcctgtgcttttcctctct 21826817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 26869694 - 26869814
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| |||||||   ||||||||||||||||||||||    
T  26869694 attacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatg 26869793  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  26869794 cttcctgtgcttttcctctct 26869814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 350 - 468
Target Start/End: Complemental strand, 8770958 - 8770839
Alignment:
Q  350 attacttgctcctaaagtttctcactt-attagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||||| |||||||||||  || |||||||||||| ||||||||||||||||||||||| ||| |||||||   |||| ||||||||||||||||    
T  8770958 attacttgctcgtaaagtttctctttttattagttgtgaattttctctataaatagagagctcacacaatgcattctggacactgaaattcacagttgat 8770859  T
Q  449 gcttccagtgtttttcctct 468  Q
    |||||| |||||||||||||    
T  8770858 gcttcctgtgtttttcctct 8770839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 3666627 - 3666509
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||  |||||||||||||||||||||||||| |||||||||||||||||||||||  ||| |||||| ||||||||||||||||  ||||||    
T  3666627 attacttgttctcaaagtttctcacttattagttgtgaattttctctataaatagagagctcacgcagggcattctacacaccgaaattcac--ttgatg 3666530  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||  |||||||| ||||||    
T  3666529 cttcttgtgttttttctctct 3666509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 36949499 - 36949395
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| ||||||||||||||||||||| |||| ||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||| ||||||    
T  36949499 attacttgttcccaaagtttctcacttattagttatgaattttttctataaatagagagctcacacagtgcattcaacacaccgaaaatcacaattgatg 36949400  T
Q  450 cttcc 454  Q
     ||||    
T  36949399 tttcc 36949395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 351 - 470
Target Start/End: Original strand, 24435564 - 24435683
Alignment:
Q  351 ttacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgc 450  Q
    ||||||| ||||||||| | |||||||||||| | ||||||||||||||||||||||||||  |||||||||||  ||||||||| | |||||| ||||     
T  24435564 ttacttgttcctaaagtctttcacttattagtagagaactttctctataaatagagagctctcacagtgcattcttcacaccgaattccacagtcgatga 24435663  T
Q  451 ttccagtgtttttcctctct 470  Q
    |||| ||||  |||||||||    
T  24435664 ttcctgtgtgattcctctct 24435683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 363 - 412
Target Start/End: Original strand, 15395233 - 15395282
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctca 412  Q
    |||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  15395233 aaagttactcacttattagttgtgaattttctctataaatagagagctca 15395282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 26667941 - 26667897
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  26667941 acacaccgaaattcacagttgatgcttcctgtgtttttcctctct 26667897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 26939538 - 26939494
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  26939538 acacaccgaaattcacagttgatgcttcctgtgtttttcctctct 26939494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 29167405 - 29167449
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  29167405 acacaccgaaattcacagttgatgcttcctgtgtttttcctctct 29167449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 424
Target Start/End: Complemental strand, 41099244 - 41099170
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattc 424  Q
    |||||||| ||| ||||||| |||| ||||||||| ||| ||||||||||||||||| ||||| ||| |||||||    
T  41099244 attacttgttcccaaagtttatcacctattagttgggaagtttctctataaatagagggctcacacaatgcattc 41099170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 470
Target Start/End: Complemental strand, 36430272 - 36430230
Alignment:
Q  428 acaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||| ||||||||||||| |||||||||||||||    
T  36430272 acaccgaaattcatagttgatgcttcctgtgtttttcctctct 36430230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 7452416 - 7452372
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||    
T  7452416 acacgccgaaattcacagttgatgcttcctgtgtttttcttctct 7452372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 36424301 - 36424257
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||||||||||||||||| || | |||||||||||||||    
T  36424301 acacaccgaaattcacagttgatgttttctgtgtttttcctctct 36424257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 463
Target Start/End: Original strand, 6154867 - 6154902
Alignment:
Q  428 acaccgaaattcacagttgatgcttccagtgttttt 463  Q
    ||||||||||||||||||||||||||| ||||||||    
T  6154867 acaccgaaattcacagttgatgcttcctgtgttttt 6154902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 1e-54; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 3034357 - 3034237
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3034357 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 3034258  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  3034257 cttcctgtgtttttcctctct 3034237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 3693332 - 3693212
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3693332 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 3693233  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  3693232 cttcctgtgtttttcctctct 3693212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 8888644 - 8888524
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8888644 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 8888545  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  8888544 cttcctgtgtttttcctctct 8888524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 3673300 - 3673180
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  3673300 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacactgaaattcacagttgatg 3673201  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  3673200 cttcctgtgtttttcctctct 3673180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 8070393 - 8070273
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8070393 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccagacaccgaaattcacagttgatg 8070294  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| || ||||||||||||    
T  8070293 cttcctgtatttttcctctct 8070273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 8883884 - 8883764
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||    
T  8883884 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaataaagagcttacacagtgcattccacacaccgaaattcacagttgatg 8883785  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  8883784 cttcctgtgtttttcctctct 8883764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 10585570 - 10585690
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||| ||||||||||||||||    
T  10585570 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccaaaattcacagttgatg 10585669  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  10585670 cttcctgtgtttttcctctct 10585690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 9706970 - 9707091
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  9706970 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 9707069  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  9707070 gcttcctgtgcttttcttctct 9707091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 16749299 - 16749420
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  16749299 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 16749398  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  16749399 gcttcctgtgcttttcttctct 16749420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 19776600 - 19776479
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  19776600 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 19776501  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  19776500 gcttcctgtgcttttcttctct 19776479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 6595773 - 6595893
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| ||||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||||||  ||||| | ||||||| ||||||||    
T  6595773 attacttgttcccaaagtttttcacttattagttgtgaattttctctataaatagagagctcacagagtgcattttacacatcaaaattcatagttgatg 6595872  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  6595873 cttcctgtgtttttcctctct 6595893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 18350155 - 18350275
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||||    
T  18350155 attacttgttcccaaagtttctcacctattagttgcgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatg 18350254  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||||||||| |||||    
T  18350255 cttcctgtgtttttcttctct 18350275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 4106722 - 4106826
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  4106722 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 4106821  T
Q  466 tctct 470  Q
    |||||    
T  4106822 tctct 4106826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 4110574 - 4110678
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  4110574 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 4110673  T
Q  466 tctct 470  Q
    |||||    
T  4110674 tctct 4110678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 8223649 - 8223529
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| |||||||   || |||||||||||||||||||    
T  8223649 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggaccccgaaattcacagttgatg 8223550  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  8223549 cttcctgtgcttttcctctct 8223529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 15965753 - 15965649
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  15965753 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 15965654  T
Q  466 tctct 470  Q
    |||||    
T  15965653 tctct 15965649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 15969677 - 15969573
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  15969677 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 15969578  T
Q  466 tctct 470  Q
    |||||    
T  15969577 tctct 15969573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 15973601 - 15973497
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  15973601 gtttctcacttattagttgtaaattctctctataaatagagaactcatacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 15973502  T
Q  466 tctct 470  Q
    |||||    
T  15973501 tctct 15973497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 349 - 453
Target Start/End: Original strand, 22758559 - 22758663
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||| ||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  22758559 cattacttgtttccaaaatttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 22758658  T
Q  449 gcttc 453  Q
    |||||    
T  22758659 gcttc 22758663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 45903925 - 45904045
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||| |  |||| ||| | |||||||||||||||||| |||    
T  45903925 attacttgctcctaaagtttctcacttattactttggaactttctctataaatagagagctcacaatgtgctttcaatacaccgaaattcacagttaatg 45904024  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  45904025 tttcctgtgcttttcctctct 45904045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 350 - 468
Target Start/End: Complemental strand, 8197166 - 8197048
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||||    || |||||||||||||||||||    
T  8197166 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattatggaccccgaaattcacagttgatg 8197067  T
Q  450 cttccagtgtttttcctct 468  Q
    ||||| ||| |||||||||    
T  8197066 cttcctgtgcttttcctct 8197048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 8488770 - 8488890
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||| ||||| ||||||||||| | |||||||||    
T  8488770 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagt-cattctacacaccgaaagttacagttgat 8488868  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  8488869 gcttcctgtgcttttcttctct 8488890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 467
Target Start/End: Original strand, 14425223 - 14425340
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| |||||| |||||| |||||||| |||||||||||||| ||| |||||||   ||||||||||||||||||||||    
T  14425223 attacttgttcccaaagtttctcacctattagctgtgaagtttctctagaaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatg 14425322  T
Q  450 cttccagtgtttttcctc 467  Q
     |||| ||| ||||||||    
T  14425323 attcctgtgcttttcctc 14425340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 29942 - 29822
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||| ||||||||||||| ||||| ||| |||||||   |||||||||||||||| |||||    
T  29942 attacttgttcccaaagtttctcacctattagttgtgaaatttttctataaatagagggctcacacaatgcattcaggacaccgaaattcacagatgatg 29843  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  29842 attcctgtgcttttcctctct 29822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 37438939 - 37439060
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||| ||||| |||| ||||||||||||||||||    
T  37438939 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagttcattctacacgccgaaattcacagttgat 37439038  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||  ||| ||||| |||||    
T  37439039 acttcatgtgcttttcttctct 37439060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 363 - 454
Target Start/End: Complemental strand, 51923035 - 51922944
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttcc 454  Q
    |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| |||||||   |||||||||||||||||||||| ||||    
T  51923035 aaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggacaccgaaattcacagttgatgattcc 51922944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 392 - 470
Target Start/End: Original strand, 18699200 - 18699278
Alignment:
Q  392 tctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||||||| ||||||||||| ||| ||||| |||||    
T  18699200 tctctataaatagagaactcacacagtgcattctacacaccgaaattcacacttgatgcttcctgtgcttttcttctct 18699278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 35456320 - 35456401
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 432  Q
    |||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||  ||| | |||||||||||||||||    
T  35456320 attacttgttcccaaagtttctc-cttattagttgtgaattttctctataaatagagaattcacatagtgcattccacacacc 35456401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 365 - 463
Target Start/End: Complemental strand, 53358805 - 53358703
Alignment:
Q  365 agtttctcacttattagttgtgaactttctctataaatagagagct--catacagtgcattccacacaccgaaat--tcacagttgatgcttccagtgtt 460  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||  || ||| ||||||| |||||||| |||  ||| ||||||||||||  |||||    
T  53358805 agtttttcacttattagttgtgaactttctttataaatagagagctcacacacaatgcattctacacaccgtaattgtcatagttgatgcttcatgtgtt 53358706  T
Q  461 ttt 463  Q
    |||    
T  53358705 ttt 53358703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 47540899 - 47540985
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    |||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||| || ||| | ||| ||||| ||||| |||||    
T  47540899 attacttgttcccaaagtttctcacatattagttgtgaattttctctataaatagaaagttcacatagttcattctacacatcgaaa 47540985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 351 - 463
Target Start/End: Complemental strand, 16055889 - 16055777
Alignment:
Q  351 ttacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgc 450  Q
    ||||||| ||||||||||| |||||||||||| | ||||||||||||||||| ||| ||||  | | ||||||   ||| ||||||  ||||||||||||    
T  16055889 ttacttgttcctaaagtttttcacttattagtagagaactttctctataaatggagggctctcaaaatgcatttttcacgccgaaaaacacagttgatgc 16055790  T
Q  451 ttccagtgttttt 463  Q
    |||| ||| ||||    
T  16055789 ttcctgtgctttt 16055777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 18467875 - 18467831
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  18467875 acacaccgaaattcacagttgatgcttcctgtgtttttcctctct 18467831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 32473456 - 32473500
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  32473456 acacaccgaaattcacagttgatgcttcctgtgtttttcctctct 32473500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 39775160 - 39775204
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  39775160 acacaccgaaattcacagttgatgcttcctgtgtttttcctctct 39775204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 11997387 - 11997448
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctca 412  Q
    |||||||| ||| ||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  11997387 attacttgttcccaaagtttctcaat-attagttgtgaattttctctataaatagagagctca 11997448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 424
Target Start/End: Original strand, 12899123 - 12899197
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattc 424  Q
    |||||||| ||| ||||||||||||||||||| |||||| ||||||||||||||  ||| ||| | |||||||||    
T  12899123 attacttgttcccaaagtttctcacttattagctgtgaattttctctataaataatgagatcacatagtgcattc 12899197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 470
Target Start/End: Complemental strand, 14672048 - 14671987
Alignment:
Q  409 ctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||    
T  14672048 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctct 14671987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 376 - 436
Target Start/End: Complemental strand, 429117 - 429057
Alignment:
Q  376 tattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    ||||| ||||||| |||||||||||||| |||||||| | ||| |||||||||||||||||    
T  429117 tattacttgtgaattttctctataaataaagagctcacaaagttcattccacacaccgaaa 429057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 14438132 - 14438176
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||    
T  14438132 acacaccgaaattcacagttgatgcttcctgtgtttttcttctct 14438176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 363 - 463
Target Start/End: Complemental strand, 16043202 - 16043103
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 462  Q
    ||||||| |||||||||||| | ||||||||||||||||||||| ||||  | | |||||||  ||||||||||   ||||||||||||||| ||| |||    
T  16043202 aaagtttttcacttattagtagagaactttctctataaatagagggctctcaaaatgcattcttcacaccgaaa-aaacagttgatgcttcctgtgattt 16043104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 18472669 - 18472625
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||||||||||||| |||||||| |||||||||||||||    
T  18472669 acacaccgaaattcacagttaatgcttcctgtgtttttcctctct 18472625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 405
Target Start/End: Complemental strand, 16023246 - 16023191
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaataga 405  Q
    |||||||| ||| ||||||| |||| ||||||||||||| ||||||||||||||||    
T  16023246 attacttgttcccaaagtttgtcacatattagttgtgaattttctctataaataga 16023191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 403
Target Start/End: Complemental strand, 49020167 - 49020114
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaata 403  Q
    |||||||| ||| ||| ||| |||||||||||||||||| ||||||||||||||    
T  49020167 attacttgttcccaaaatttatcacttattagttgtgaattttctctataaata 49020114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 411
Target Start/End: Complemental strand, 16048694 - 16048646
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctc 411  Q
    ||||||| |||||||||||| | ||||||||||||||||||||| ||||    
T  16048694 aaagtttttcacttattagtagagaactttctctataaatagagggctc 16048646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 47540520 - 47540572
Alignment:
Q  361 ctaaagtttctcacttattagttgtgaactttctctataaatagagagctcat 413  Q
    |||||||||||||| ||||||||||||| |||||||| ||||| || ||||||    
T  47540520 ctaaagtttctcacatattagttgtgaattttctctaaaaataaagggctcat 47540572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 363 - 412
Target Start/End: Complemental strand, 18012041 - 18011992
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctca 412  Q
    ||||||| |||| ||||||||||||| |||||||||||||| | ||||||    
T  18012041 aaagtttatcacatattagttgtgaattttctctataaataaatagctca 18011992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 106; Significance: 7e-53; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 9260 - 9373
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9260 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 9359  T
Q  450 cttccagtgttttt 463  Q
    ||||| ||||||||    
T  9360 cttcctgtgttttt 9373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 105; Significance: 3e-52; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 4237721 - 4237841
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  4237721 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacgcaccgaaattcacagttgatg 4237820  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  4237821 cttcctgtgtttttcctctct 4237841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 4242460 - 4242580
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||    
T  4242460 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacgcaccgaaattcacagttgatg 4242559  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  4242560 cttcctgtgtttttcctctct 4242580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 31449245 - 31449365
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  31449245 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 31449344  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||| | |||||||||||||||    
T  31449345 ctttctgtgtttttcctctct 31449365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 8330743 - 8330863
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  8330743 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccatacaccgaaattcacagttgatg 8330842  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  8330843 cttcctgtgcttttcctctct 8330863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 43302064 - 43302184
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  43302064 attacttgctcccaaagtttctcacttattacttgtgaactttctctataaatagagagctcacacagtgcattccacacatcgaaattcacagttgatg 43302163  T
Q  450 cttccagtgtttttcctctct 470  Q
    |||||  ||||||||||||||    
T  43302164 cttcctatgtttttcctctct 43302184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 353 - 470
Target Start/End: Complemental strand, 37772418 - 37772301
Alignment:
Q  353 acttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgctt 452  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || |||||||||||||||||||||||||    
T  37772418 acttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatgctt 37772319  T
Q  453 ccagtgtttttcctctct 470  Q
    || |||||||||||||||    
T  37772318 cctgtgtttttcctctct 37772301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 25367366 - 25367486
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||||||||| ||||||    
T  25367366 attacttgatcccaaagtttctcacttactagttgtgaactttctctataaatagagagttcacacagtgctttccatacaccgaaattcacaattgatg 25367465  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||  |||||||||||||||    
T  25367466 cttcatgtgtttttcctctct 25367486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 34818086 - 34818206
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| |||   ||||||||||||||||||||||    
T  34818086 attacttgctccgaaagtttctcagttattagttgtgaactttctctataaatagagagttcacacagtgctttcggtacaccgaaattcacagttgatg 34818185  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  34818186 cttcctgtgcttttcctctct 34818206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 4582676 - 4582796
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||||    
T  4582676 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatg 4582775  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||||||||| |||||    
T  4582776 cttcctgtgtttttcttctct 4582796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 21384459 - 21384338
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  21384459 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgat 21384360  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  21384359 gcttcctgtgcttttcttctct 21384338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 21387879 - 21387758
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  21387879 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgat 21387780  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  21387779 gcttcctgtgcttttcttctct 21387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 21411738 - 21411617
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||  | ||||||||| |||||||||||||||||||||||    
T  21411738 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgat 21411639  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||  ||| ||||| |||||    
T  21411638 gcttcatgtgcttttcttctct 21411617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 21806230 - 21806109
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||  | ||||||||| |||||||||||||||||||||||    
T  21806230 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcgcatagtgcattctacacaccgaaattcacagttgat 21806131  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||  ||| ||||| |||||    
T  21806130 gcttcatgtgcttttcttctct 21806109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 18861966 - 18862070
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  18861966 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 18862065  T
Q  466 tctct 470  Q
    |||||    
T  18862066 tctct 18862070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 19393111 - 19393231
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||    || |||||||||||||||||||    
T  19393111 attacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagatctcacacaatgcattatggaccccgaaattcacagttgatg 19393210  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| ||||| |||||    
T  19393211 cttcctgtgcttttcttctct 19393231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 23915193 - 23915086
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 462  Q
    ||||||||||| ||||||||||| |||| || ||||||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||| ||| |||    
T  23915193 aaagtttctcatttattagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgatgcttcctgtgcttt 23915094  T
Q  463 tcctctct 470  Q
    || |||||    
T  23915093 tcttctct 23915086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 467
Target Start/End: Complemental strand, 22104389 - 22104272
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| |||||| |||||| ||||||||||||||||||||||| ||| |||||||   ||||||||||||||| ||||||    
T  22104389 attacttgttcccaaagtttctcacctattagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacatttgatg 22104290  T
Q  450 cttccagtgtttttcctc 467  Q
     |||| ||| ||||||||    
T  22104289 attcctgtgcttttcctc 22104272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 21827335 - 21827439
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| ||   |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  21827335 gtttctcacttattagttgtaaatgatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 21827434  T
Q  466 tctct 470  Q
    |||||    
T  21827435 tctct 21827439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 350 - 464
Target Start/End: Original strand, 16066597 - 16066711
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    ||||||||  || |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||| |    ||||||||||||||||||||||    
T  16066597 attacttgtccccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcactatggacaccgaaattcacagttgatg 16066696  T
Q  450 cttccagtgtttttc 464  Q
    ||||| || ||||||    
T  16066697 cttcctgtatttttc 16066711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 25733575 - 25733649
Alignment:
Q  380 agttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttcc 454  Q
    |||||| |||| || ||||||||||||| |||| | ||||||||| |||||||||||||||||||||||||||||    
T  25733575 agttgtaaactatccctataaatagagaactcacaaagtgcattctacacaccgaaattcacagttgatgcttcc 25733649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 14036169 - 14036083
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    |||||| | ||| |||||||||||| ||||| | ||||| ||| ||||||||||||||||||| | | | |||||||||||||||||    
T  14036169 attactcgttcccaaagtttctcacatattaatcgtgaattttttctataaatagagagctcacaaaattcattccacacaccgaaa 14036083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 404
Target Start/End: Complemental strand, 17153252 - 17153198
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatag 404  Q
    |||||||| ||| |||||||||||| ||||||||||||  |||||||||||||||    
T  17153252 attacttgttcccaaagtttctcacatattagttgtgatttttctctataaatag 17153198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 17157432 - 17157486
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatag 404  Q
    ||||| || ||| |||||||||||| ||||||||||||  |||||||||||||||    
T  17157432 attacgtgttcccaaagtttctcacatattagttgtgatttttctctataaatag 17157486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 436
Target Start/End: Complemental strand, 15197331 - 15197266
Alignment:
Q  371 tcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    |||| ||||||||||||| || | |||||||||||||| ||| | ||| |||||||| ||||||||    
T  15197331 tcacatattagttgtgaatttacactataaatagagagttcagatagttcattccacgcaccgaaa 15197266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 7e-50; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 10160100 - 10160220
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10160100 attacttactcccaaagtttctcacttattagttgtgaactttctctacaaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 10160199  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  10160200 cttcctgtgtttttcctctct 10160220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 25375603 - 25375483
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||| |||||| |||||||||||||||||    
T  25375603 attacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagcttacacagtgcattctacacactgaaattcacagttgatg 25375504  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||  |||||||||||    
T  25375503 attccggtacttttcctctct 25375483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 34070133 - 34070013
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||||    
T  34070133 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatg 34070034  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||||||| ||||| |||||    
T  34070033 cttccagtgcttttcttctct 34070013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 23068132 - 23068253
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | |||||||||| |||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  23068132 cattacttgtttccaaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 23068231  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  23068232 gcttcctgtgcttttcttctct 23068253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 28855844 - 28855725
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||| | ||||||||||| |||||||||||||| |||| |||||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  28855844 attacttgcttccaaagtttctcatttattagttgtgaa-tttccctataaatagagagctcacaaagtgcattcgacacaccgaaattcacagttgatg 28855746  T
Q  450 cttccagtgtttttcctctct 470  Q
     ||||  ||||||||||||||    
T  28855745 attcctatgtttttcctctct 28855725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 358 - 470
Target Start/End: Complemental strand, 30658883 - 30658771
Alignment:
Q  358 ctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagt 457  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||  ||||||||||||||||||||   |    
T  30658883 ctcccaaagtttctcacttattagttgtgaactttctccataaatagagagctcacacagtgcattccacatacacaaattcacagttgatgcttcatat 30658784  T
Q  458 gtttttcctctct 470  Q
    |||| ||||||||    
T  30658783 gtttgtcctctct 30658771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 1284229 - 1284108
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  1284229 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 1284130  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||| ||| ||||| |||||    
T  1284129 acttcctgtgcttttcttctct 1284108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 22845116 - 22844996
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||| |  ||| | ||||||||||| ||||||    
T  22845116 attacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacatagtgcaatgtacagaacgaaattcacaattgatg 22845017  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||  |||||||||||||||    
T  22845016 cttcttgtgtttttcctctct 22844996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 377670 - 377790
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    ||||||||  ||||||||||||||| | ||||||||||| ||| ||||||||||||||||||| | | |||||| |  ||||||||||||||||||||||    
T  377670 attacttgtccctaaagtttctcaccttttagttgtgaagtttttctataaatagagagctcacataatgcattacggacaccgaaattcacagttgatg 377769  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||||||||| |||||    
T  377770 cttcctgtgtttttcttctct 377790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 24292842 - 24292962
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| | ||||||||||| ||||||||||||||||| ||||| ||| |||||||   || |||||||||||||||||||    
T  24292842 attacttgttcccaaagtttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatg 24292941  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  24292942 cttcctgtgcttttcctctct 24292962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 30344312 - 30344416
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  30344312 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 30344411  T
Q  466 tctct 470  Q
    |||||    
T  30344412 tctct 30344416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 7559730 - 7559851
Alignment:
Q  350 attacttgctcctaaagtttctcactt-attagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||||| |||||||||||  || |||||||||||| ||||||||||||||||||||||| ||| |||||||   ||||  |||||||||||||||    
T  7559730 attacttgctcgtaaagtttctctttttattagttgtgaattttctctataaatagagagctcacacaatgcattctggacacttaaattcacagttgat 7559829  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| |||||||| ||||||    
T  7559830 gcttcctgtgttttttctctct 7559851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 26897341 - 26897228
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| |||||||   || |||||||||||||||||||    
T  26897341 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattctggactccgaaattcacagttgatg 26897242  T
Q  450 cttccagtgttttt 463  Q
    ||||| ||| ||||    
T  26897241 cttcctgtgctttt 26897228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 354 - 470
Target Start/End: Original strand, 6297277 - 6297392
Alignment:
Q  354 cttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttc 453  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||| ||||| | ||| | |||| |||||||||||||||||||||    
T  6297277 cttgctcccaaagtttatcacttattagttgtcaactttctcta-aaatagagagctcacacagttctttctatacacagaaattcacagttgatgcttc 6297375  T
Q  454 cagtgtttttcctctct 470  Q
      ||| |||||||||||    
T  6297376 atgtgcttttcctctct 6297392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 6856911 - 6856791
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| | |||||     ||||||||||||||||||||    
T  6856911 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatacattctggggaccgaaattcacagttgatg 6856812  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| ||||| |||||    
T  6856811 cttcctgtgcttttcttctct 6856791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 24286274 - 24286394
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||| ||||||| | ||||||||||| ||||||||||||||||| ||||| ||| |||||||   || |||||||||||||||||||    
T  24286274 attacttgttcccaaagcttctcaccttttagttgtgaagtttctctataaatagagggctcacacaatgcattcaggaccccgaaattcacagttgatg 24286373  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  24286374 cttcctgtgcttttcctctct 24286394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 349 - 463
Target Start/End: Complemental strand, 9785863 - 9785751
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| || ||||||||||||| |||  ||||||||||  |||||||||||||||||||||||    
T  9785863 cattacttgtttccaaagtttctcacttattagttgtaaactatccctataaatagagaactc--acagtgcattttacacaccgaaattcacagttgat 9785766  T
Q  449 gcttccagtgttttt 463  Q
    |||||| ||| ||||    
T  9785765 gcttcctgtgctttt 9785751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 42248941 - 42248821
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| | | |||||||||||| ||||||||  ||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||| ||||||    
T  42248941 attacttgtttccaaagtttctcacctattagttcggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacaattgatg 42248842  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| ||||| |||||    
T  42248841 cttcctgtgcttttcttctct 42248821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 464
Target Start/End: Complemental strand, 30635510 - 30635393
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaata--gagagctcatacagtgcattccacacaccg-aaattcacagttg 446  Q
    |||||||| |||  ||||||||||||||||||||||||| ||||| ||||||||   |||||||| | ||||||||  |||||||| |||||||||||||    
T  30635510 attacttgttccccaagtttctcacttattagttgtgaattttctttataaatatttagagctcacaaagtgcattttacacaccgaaaattcacagttg 30635411  T
Q  447 atgcttccagtgtttttc 464  Q
    |||||||| ||| |||||    
T  30635410 atgcttcctgtgcttttc 30635393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 351 - 412
Target Start/End: Complemental strand, 17327773 - 17327712
Alignment:
Q  351 ttacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctca 412  Q
    ||||||| ||| ||| ||||||||||||||||||| || |||||||||||||||||||||||    
T  17327773 ttacttgttcccaaaatttctcacttattagttgtaaattttctctataaatagagagctca 17327712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 18345074 - 18345030
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  18345074 acacaccgaaattcacagttgatgcttcctgtgtttttcctctct 18345030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 428 - 470
Target Start/End: Original strand, 17968397 - 17968439
Alignment:
Q  428 acaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  17968397 acaccgaaattcacagttgatgcttcctgtgtttttcctctct 17968439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 17452966 - 17453053
Alignment:
Q  350 attacttgctcctaaagtttctcacttattag-----ttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 432  Q
    |||||||| ||| |||||||||||||||||||     |||| || |||||||||||||||||| |||| | ||| |||||||||||||    
T  17452966 attacttgttcccaaagtttctcacttattagattagttgtaaattttctctataaatagagatctcacatagtacattccacacacc 17453053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 30641491 - 30641545
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatag 404  Q
    |||||||| ||| |||||||||||| ||||||||| ||  |||||||||||||||    
T  30641491 attacttgttccaaaagtttctcacatattagttgagatttttctctataaatag 30641545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 7e-50; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 3094803 - 3094683
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||     
T  3094803 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagttcacacagtgcattccacacaccgaaattcacagttgata 3094704  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  3094703 cttcctgtgtttttcctctct 3094683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 40232768 - 40232888
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40232768 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatg 40232867  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||  |||||||||||    
T  40232868 cttcctgtacttttcctctct 40232888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 41097338 - 41097458
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  41097338 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttccacacaccgaaattcacagttgatg 41097437  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||  ||| |||||||||||    
T  41097438 cttcatgtgcttttcctctct 41097458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 13894030 - 13893910
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||| ||| ||| ||||||| |||||| |||| ||||||||||||    
T  13894030 attacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagttcacacaatgcattctacacactgaaaatcacagttgatg 13893931  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  13893930 cttcctgtgtttttcctctct 13893910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 17213824 - 17213944
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| | ||||||||||| | ||||||||    
T  17213824 attacttgttcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtacattcgatacaccgaaatttatagttgatg 17213923  T
Q  450 cttccagtgtttttcctctct 470  Q
     ||||  ||||||||||||||    
T  17213924 tttcctatgtttttcctctct 17213944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 39243402 - 39243523
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  39243402 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 39243501  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  39243502 gcttcctgtgcttttcttctct 39243523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 39246957 - 39247078
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  39246957 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 39247056  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  39247057 gcttcctgtgcttttcttctct 39247078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 1067195 - 1067075
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||| |||| ||| ||||||    ||| ||||||||||||||||||    
T  1067195 attacgtgttcctaaagtttctcacttattagttgtgaattttctctataaatagagaactcacacattgcattatggacaacgaaattcacagttgatg 1067096  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  1067095 cttcctgtgtttttcctctct 1067075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 52100602 - 52100721
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||| |||||||||||  |||||||||||    
T  52100602 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcatacaatgcattcaacacaccgaaa-acacagttgatg 52100700  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| |||||||||||||||    
T  52100701 attcctgtgtttttcctctct 52100721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 41387354 - 41387475
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  41387354 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 41387453  T
Q  449 gcttccagtgtttttcctctct 470  Q
    || ||  ||||||||| |||||    
T  41387454 gcatcatgtgtttttcttctct 41387475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 14804218 - 14804098
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| |||||||||||||||||||||||  || ||||||| | || |||||||||||||||||||    
T  14804218 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacgcaatgcattctagaccccgaaattcacagttgatg 14804119  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  14804118 attcctgtgcttttcctctct 14804098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 22428576 - 22428695
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||   || |||||||||||||||||||    
T  22428576 attacttgttcccaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggac-ccgaaattcacagttgatg 22428674  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  22428675 attcctgtgcttttcctctct 22428695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 21498365 - 21498252
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||||||| |||||||||||| |||||||||||    
T  21498365 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacacaccgaaatacacagttgatg 21498266  T
Q  450 cttccagtgttttt 463  Q
    ||||| ||| ||||    
T  21498265 cttcctgtgctttt 21498252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 1924450 - 1924554
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  1924450 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 1924549  T
Q  466 tctct 470  Q
    |||||    
T  1924550 tctct 1924554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 20923464 - 20923568
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  20923464 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 20923563  T
Q  466 tctct 470  Q
    |||||    
T  20923564 tctct 20923568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 26199072 - 26198952
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| ||||||| |||| | |||| |||||| ||||||||||||||||||||||| ||| |||||||   ||||||||||||||||||||||    
T  26199072 attacttgttcccaaagtttttcaccttttagctgtgaagtttctctataaatagagagctcacacaatgcattctgtacaccgaaattcacagttgatg 26198973  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  26198972 cttcctgtgcttttcctctct 26198952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 350 - 449
Target Start/End: Complemental strand, 14819686 - 14819587
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||| | || |||||||||||||||||||    
T  14819686 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctagaccccgaaattcacagttgatg 14819587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 19725286 - 19725404
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||| ||| ||| |||||||    |||||||||||||||||||||    
T  19725286 attacttgctcccaaagtttctcatttattagttgtga--tttctctataaatagagagttcacacattgcattctgggcaccgaaattcacagttgatg 19725383  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||| ||||    
T  19725384 cttcctgtgcttttcccctct 19725404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 377 - 470
Target Start/End: Complemental strand, 33055723 - 33055630
Alignment:
Q  377 attagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||||| | ||||| |||||||||||||||| |||  ||||||||| |||||    
T  33055723 attagttgtgaactttctctataaatagagagttcacacagtgcattctatacaccaaaattcacagttgatgattcttgtgtttttcttctct 33055630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 2367757 - 2367637
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| |||||| ||| ||  |||||||||||||||||||||| ||| |||||||   |||| |||||||||||||||||    
T  2367757 attacttgttcccaaagtttctcacctattagctgtaaagcttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatg 2367658  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| ||||| |||||    
T  2367657 cttcctgtgcttttcttctct 2367637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 382 - 470
Target Start/End: Original strand, 16836698 - 16836786
Alignment:
Q  382 ttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||| ||||||||||||||||||||||| |||||||||||   ||||||||||||||||||||||||||  ||| |||||||||||    
T  16836698 ttgtgaattttctctataaatagagagctcacacagtgcattctggacaccgaaattcacagttgatgcttcatgtgcttttcctctct 16836786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 2384626 - 2384746
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| |||||| | | ||  |||||||||||||||||||||| ||| |||||||   |||| |||||||||||||||||    
T  2384626 attacttgttcccaaagtttctcacctattagctctaaagcttctctataaatagagagctcacacaatgcattctggacacggaaattcacagttgatg 2384725  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| ||||| |||||    
T  2384726 cttcctgtgcttttcttctct 2384746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 350 - 410
Target Start/End: Original strand, 8267232 - 8267292
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagct 410  Q
    |||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8267232 attacttgctcacaaagtttatcacttattagttgtgaactttctctataaatagagagct 8267292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 350 - 463
Target Start/End: Complemental strand, 19727079 - 19726967
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||  ||| ||||||| ||||||||||||   |||||| |||||||||||||||| |||  ||||||   | ||||||||||||||||||||    
T  19727079 attacttgctctcaaaatttctcatttattagttgtgtgatttctcgataaatagagagctcacaca-agcattctggataccgaaattcacagttgatg 19726981  T
Q  450 cttccagtgttttt 463  Q
    ||||| || |||||    
T  19726980 cttcctgtattttt 19726967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 26927153 - 26927197
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  26927153 acacaccgaaattcacagttgatgcttcctgtgtttttcctctct 26927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 386 - 464
Target Start/End: Original strand, 26319589 - 26319667
Alignment:
Q  386 gaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttc 464  Q
    |||||||||||||||||| |||||||| ||| |||||||  |||||| |||  |||||||||||||||| ||| |||||    
T  26319589 gaactttctctataaataaagagctcacacaatgcattcttcacaccaaaaaacacagttgatgcttcctgtgattttc 26319667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 10135988 - 10135944
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||    
T  10135988 acacaccgaaattcacagttgatgcttcctgtgtttttcttctct 10135944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 431
Target Start/End: Original strand, 23285219 - 23285300
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacac 431  Q
    |||||||| ||| |||| ||||||| ||||| ||||||| |||||||||||||||| ||| || | | ||||||| ||||||    
T  23285219 attacttgttcccaaaggttctcacatattaattgtgaattttctctataaatagatagcccacaaattgcattctacacac 23285300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 431
Target Start/End: Original strand, 23254568 - 23254648
Alignment:
Q  351 ttacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacac 431  Q
    ||||||| | ||||| |||||||| ||||| || | || |||||||||||||||||||| || | ||||||||| ||||||    
T  23254568 ttacttgtttctaaaatttctcacatattaattataaattttctctataaatagagagcacacaaagtgcattctacacac 23254648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 470
Target Start/End: Complemental strand, 10140754 - 10140712
Alignment:
Q  428 acaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    
T  10140754 acaccgaaattcacagttgatgcttcatgtgtttttcttctct 10140712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 419 - 453
Target Start/End: Original strand, 18784002 - 18784036
Alignment:
Q  419 gcattccacacaccgaaattcacagttgatgcttc 453  Q
    |||||| ||||||||||||||||||||||||||||    
T  18784002 gcattctacacaccgaaattcacagttgatgcttc 18784036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Original strand, 51040942 - 51040987
Alignment:
Q  425 cacacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||| |||||||||||||||||| || | |||||||||||||||    
T  51040942 cacacatcgaaattcacagttgatgttttctgtgtttttcctctct 51040987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 93; Significance: 4e-45; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 47353 - 47473
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||    
T  47353 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatg 47452  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  47453 cttcctgtgcttttcctctct 47473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 52297 - 52417
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||||||||||||||||    
T  52297 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacatacaccgaaattcacagttgatg 52396  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  52397 cttcctgtgcttttcctctct 52417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 4e-45; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 3997442 - 3997562
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| || |||||||||||||||||||||||||    
T  3997442 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatattgctttacacacaccgaaattcacagttgatg 3997541  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  3997542 cttcctgtgtttttcctctct 3997562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 350 - 467
Target Start/End: Original strand, 7902491 - 7902608
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||||||||||| ||||||    
T  7902491 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacacagtgctttacacacaccgaaattcacatttgatg 7902590  T
Q  450 cttccagtgtttttcctc 467  Q
    ||||| ||| ||||||||    
T  7902591 cttcctgtgcttttcctc 7902608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 350 - 463
Target Start/End: Original strand, 13521365 - 13521478
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||    
T  13521365 attacttgctcccaaagtttctcacttattagttgtgaactttatctataaatagagagctcacacagtgcattccacaaatcgaaattcacagttgatg 13521464  T
Q  450 cttccagtgttttt 463  Q
    ||||| ||||||||    
T  13521465 cttcctgtgttttt 13521478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 34561138 - 34561018
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||| | ||||||||||||||||||||||    
T  34561138 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacatagtgctttcgatacaccgaaattcacagttgatg 34561039  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  34561038 cttcctgtgcttttcctctct 34561018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 15225879 - 15225759
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||    
T  15225879 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacagagtgcattctacacaccgaaattcacagttgatg 15225780  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| ||||| |||||    
T  15225779 cttcctgtgcttttcttctct 15225759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 47575375 - 47575256
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  47575375 attacttgctcc-atagtttctcacttattagttgtgaattttctctataaaaagagagctcacacagtgcattccacacaccgaaattcaaagttgatg 47575277  T
Q  450 cttccagtgtttttcctctct 470  Q
    |  || |||||||||||||||    
T  47575276 caacctgtgtttttcctctct 47575256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 355 - 452
Target Start/End: Original strand, 31297880 - 31297977
Alignment:
Q  355 ttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgctt 452  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  31297880 ttgctcccaaagtttctcacttattagttgtgaactctctctataaatagagagctcacacagtgcattccatacaccgaaattcacaattgatgctt 31297977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 15011195 - 15011316
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||  |||||||||||||||||||||||    
T  15011195 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattatacacaccgaaattcacagttgat 15011294  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  15011295 gcttcctgtgcttttcttctct 15011316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 12488513 - 12488392
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  12488513 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 12488414  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||| ||| ||||| |||||    
T  12488413 acttcctgtgcttttcttctct 12488392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 41817509 - 41817376
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctcta-------------taaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||             ||||||||||||||| ||||||||||| |||||||||||    
T  41817509 attacttgctcccaaagtttctcacttattagttgtgaactttctctagagagcttctctgtaaatagagagctcacacagtgcattctacacaccgaaa 41817410  T
Q  437 ttcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||||||||||  |||||||||||||||    
T  41817409 ttcacagttgatgcttcttgtgtttttcctctct 41817376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 14868448 - 14868568
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||  ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||   || |||||||||||||||||||    
T  14868448 attacttcttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatg 14868547  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  14868548 attcctgtgcttttcctctct 14868568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 14877486 - 14877366
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||  ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||   || |||||||||||||||||||    
T  14877486 attacttcttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatg 14877387  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  14877386 attcctgtgcttttcctctct 14877366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 14898996 - 14899116
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||   || |||||||||||||||||||    
T  14898996 attacttgttcccaaagtttctcatttattagttgtgaagtttctctataaatagagagctcacacagtgcattctggaccccgaaattcacagttgatg 14899095  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||  ||| |||||||||||    
T  14899096 attcatgtgcttttcctctct 14899116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 10713655 - 10713534
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||| ||||||||| ||   |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10713655 cattacttgtttccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10713556  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  10713555 gcttcctgtgcttttcttctct 10713534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 10927425 - 10927304
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||| ||||||||| ||   |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10927425 cattacttgtttccaaagtttctcactcattagttgtaaatcatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10927326  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  10927325 gcttcctgtgcttttcttctct 10927304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 9185064 - 9185184
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||| |||||||   || |||||||||| ||||||||    
T  9185064 attacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattctggaccccgaaattcagagttgatg 9185163  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  9185164 attcctgtgcttttcctctct 9185184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 366 - 470
Target Start/End: Original strand, 14953451 - 14953555
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  14953451 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 14953550  T
Q  466 tctct 470  Q
    |||||    
T  14953551 tctct 14953555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 8660783 - 8660903
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||| ||| ||| ||||||  |||||||||||| ||||| ||||||| ||||||||||||||| |||||||| |  ||||||||| ||||||||||||||    
T  8660783 attatttgttcccaaagttcttcacttattagtagtgaattttctctgtaaatagagagctcacacagtgcagtatacacaccgagattcacagttgatg 8660882  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  8660883 cttcctgtgcttttcctctct 8660903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 9190929 - 9191049
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||| |||||||| |||||||||||||| ||| ||||||    || |||||||||| ||||||||    
T  9190929 attacttgttcccaaagtttctcacttattagttgtgaaatttctctacaaatagagagctcacacaatgcattatggaccccgaaattcagagttgatg 9191028  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  9191029 attcctgtgcttttcctctct 9191049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 25690692 - 25690588
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||| | || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  25690692 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 25690593  T
Q  466 tctct 470  Q
    |||||    
T  25690592 tctct 25690588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 26034902 - 26034782
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||   || | ||||| |||||| ||||    
T  26034902 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccctgaaatacacagtcgatg 26034803  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||  ||| |||||||||||    
T  26034802 tttcatgtgcttttcctctct 26034782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 367 - 470
Target Start/End: Complemental strand, 39320259 - 39320156
Alignment:
Q  367 tttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcct 466  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||| | ||||| ||| ||||||||| |  ||||||| |||  ||| |||||||    
T  39320259 tttctcacttattagttgtgaactttcactataaatagagagctcacacaattcattcgacaaaccgaaatttaacgttgatgtttcacgtgcttttcct 39320160  T
Q  467 ctct 470  Q
    ||||    
T  39320159 ctct 39320156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 470
Target Start/End: Complemental strand, 18023276 - 18023215
Alignment:
Q  409 ctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||| ||| ||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||    
T  18023276 ctcacacactgcattctacacaccgaaattcacagttgatgcttcctgtgcttttcttctct 18023215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 350 - 431
Target Start/End: Original strand, 26188048 - 26188129
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacac 431  Q
    |||||||| |||||||||||||||| ||||||||||||| |  || |||||||||||| ||||   ||||||||||| ||||    
T  26188048 attacttgttcctaaagtttctcacatattagttgtgaattaactatataaatagagaactcacgtagtgcattccagacac 26188129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 5270856 - 5270900
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||    
T  5270856 acacaccgaaattcacagttgatgcttcctgtgtttttcttctct 5270900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 5927650 - 5927694
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||| |||||||||||||||||||||| |||||||||||||||    
T  5927650 acacactgaaattcacagttgatgcttcctgtgtttttcctctct 5927694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 430
Target Start/End: Original strand, 52742621 - 52742684
Alignment:
Q  367 tttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacaca 430  Q
    |||||| | |||||||||| || ||||||||||||||||||||||| | ||| |||||||||||    
T  52742621 tttctcgcgtattagttgtcaattttctctataaatagagagctcacatagttcattccacaca 52742684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 432
Target Start/End: Original strand, 43477410 - 43477477
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 432  Q
    ||||||| |||||||||| ||||||| |||||||||||||||| | |||||  |||||||| ||||||||    
T  43477410 aaagtttatcacttattaattgtgaattttctctataaatagataactcat--agtgcatttcacacacc 43477477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 412
Target Start/End: Complemental strand, 32545579 - 32545535
Alignment:
Q  368 ttctcacttattagttgtgaactttctctataaatagagagctca 412  Q
    ||||||| ||||||||| ||| |||||||||||||||||||||||    
T  32545579 ttctcacatattagttgcgaattttctctataaatagagagctca 32545535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 55073849 - 55073774
Alignment:
Q  361 ctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    |||||||||| ||  ||||||||||||| |||||||||||||||||| ||||   ||| ||||  |||||||||||    
T  55073849 ctaaagtttcacatatattagttgtgaattttctctataaatagagatctcacgtagttcattatacacaccgaaa 55073774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 470
Target Start/End: Original strand, 30564184 - 30564226
Alignment:
Q  428 acaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||||||||||||||| |||  |||||||||||||||    
T  30564184 acaccgaaattcacagttgatgattcatgtgtttttcctctct 30564226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 432 - 470
Target Start/End: Original strand, 31728803 - 31728841
Alignment:
Q  432 cgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||| ||||||||| |||||    
T  31728803 cgaaattcacagttgatgcttcctgtgtttttcttctct 31728841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 8694376 - 8694332
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||||||||||  ||||| |||| |||||||||||||||    
T  8694376 acacaccgaaattcacaaatgatgattcctgtgtttttcctctct 8694332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 31766534 - 31766490
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||||||||||||||||  |||| |||||| ||||||||    
T  31766534 acacaccgaaattcacagttgatatttcctgtgtttctcctctct 31766490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 49364 - 49484
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||| |    
T  49364 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcacacagtgctttcaatacaccgaaattcacagttgacg 49463  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  49464 cttcctgtgtttttcctctct 49484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 89; Significance: 1e-42; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 149270 - 149150
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||| | |||||||||||||||||||| |    
T  149270 attacttgctcccaaagtttctcacttattagttgtgaactttctctataaatagagaactcacacagtgctttcaatacaccgaaattcacagttgacg 149171  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| |||||||||||||||    
T  149170 cttcctgtgtttttcctctct 149150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 89; Significance: 1e-42; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 6112139 - 6112259
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  6112139 attacttgctcccaaagtttctcacttattagttgggaactttctatataaatagagagctcacacagtgcattcaacacaccgaaattcacagttgatg 6112238  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||  ||| |||||||||||    
T  6112239 cttcttgtgcttttcctctct 6112259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 363 - 465
Target Start/End: Original strand, 24588571 - 24588673
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 462  Q
    |||| |||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||    
T  24588571 aaaggttctcacttattagttttgaattttctctataaatagagagctcacacagtgcattccacacaccgaaattcacagttgatgcttcctatgtttt 24588670  T
Q  463 tcc 465  Q
    |||    
T  24588671 tcc 24588673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 15704290 - 15704411
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||| |||||||||||||    
T  15704290 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgagattcacagttgat 15704389  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||||||||| |||||    
T  15704390 gcttcctgtgtttttcttctct 15704411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 16625130 - 16625010
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  16625130 attacttgttcccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatg 16625031  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| ||||| |||||    
T  16625030 cttcctgtgcttttcttctct 16625010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 19772391 - 19772512
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  19772391 cattacttgattccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 19772490  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||  ||| ||||| |||||    
T  19772491 gcttcatgtgcttttcttctct 19772512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 27324440 - 27324559
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||  ||||||| |||||||||||||||||||||||    
T  27324440 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacac--tgcattctacacaccgaaattcacagttgat 27324537  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||||||||| |||||    
T  27324538 gcttcctgtgtttttcttctct 27324559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 2077527 - 2077406
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | |||||||||||||| |||||||| |||| || ||||||||||||| |||  ||||||||||| |||||||||||||||||||||||    
T  2077527 cattacttgtttccaaagtttctcactttttagttgtaaactatccctataaatagagaactctcacagtgcattctacacaccgaaattcacagttgat 2077428  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  2077427 gcttcctgtgcttttcttctct 2077406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 22807066 - 22806945
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||| ||||||||||| |||| ||||||||||||| || |||| ||||||||||| |||||||||||||||||||||||    
T  22807066 cattacttgtttccaaagtttctcatttattagttgtaaactatctctataaatagggaactcacacagtgcattctacacaccgaaattcacagttgat 22806967  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||| ||| ||||| |||||    
T  22806966 acttcctgtgcttttcttctct 22806945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 349 - 452
Target Start/End: Original strand, 31477083 - 31477186
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||| |||||||||||||||    
T  31477083 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccaaaattcacagttgat 31477182  T
Q  449 gctt 452  Q
    ||||    
T  31477183 gctt 31477186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 16761098 - 16760976
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctc-tataaatagagagctcatacagtgcattccacacaccgaaattcacagttga 447  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||| |||||||||||| |||| ||||||||||| ||||||||||||||||||||||    
T  16761098 cattacttgtttccaaagtttctcacttattagttgtaaattatctcctataaatagagaactcacacagtgcattctacacaccgaaattcacagttga 16760999  T
Q  448 tgcttccagtgtttttcctctct 470  Q
    | ||||| ||| ||||| |||||    
T  16760998 tacttcctgtgcttttcttctct 16760976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 22949930 - 22949826
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||| | || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  22949930 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 22949831  T
Q  466 tctct 470  Q
    |||||    
T  22949830 tctct 22949826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 22953886 - 22953782
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||| | || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  22953886 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 22953787  T
Q  466 tctct 470  Q
    |||||    
T  22953786 tctct 22953782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 23872374 - 23872270
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||| | || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  23872374 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 23872275  T
Q  466 tctct 470  Q
    |||||    
T  23872274 tctct 23872270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 23876330 - 23876226
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||| | || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  23876330 gtttctcacttattagttataaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 23876231  T
Q  466 tctct 470  Q
    |||||    
T  23876230 tctct 23876226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 14073836 - 14073729
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 462  Q
    |||||||||||  ||||||||||||| ||||||||||||||||||||||||||| ||||||||  || ||||||||||||||| ||| |||  ||| |||    
T  14073836 aaagtttctcatctattagttgtgaaatttctctataaatagagagctcatacaatgcattccggaccccgaaattcacagttcatgattcttgtgcttt 14073737  T
Q  463 tcctctct 470  Q
    ||||||||    
T  14073736 tcctctct 14073729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 353 - 470
Target Start/End: Complemental strand, 26981306 - 26981189
Alignment:
Q  353 acttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgctt 452  Q
    ||||| ||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||  |||||||   || ||||||| ||||||||||||||    
T  26981306 acttgttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatgctt 26981207  T
Q  453 ccagtgtttttcctctct 470  Q
    || ||| ||||| |||||    
T  26981206 cctgtgcttttcttctct 26981189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 27073699 - 27073579
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||| ||  |||||||   || ||||||| |||||||||||    
T  27073699 attacttgttcccaaagtttctcacctattagttgtgaaatttctttataaatagagagctcacacgatgcattctggaccccgaaatacacagttgatg 27073600  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| ||||| |||||    
T  27073599 tttcctgtgcttttcttctct 27073579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 15991075 - 15991157
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 432  Q
    |||||||| | | |||||||||||||||||||||||||| |||||||| ||||||||| | | || |||||||||||||||||    
T  15991075 attacttgtttccaaagtttctcacttattagttgtgaattttctctacaaatagagaacacgtatagtgcattccacacacc 15991157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 18387646 - 18387526
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    ||||||||  || |||||||||||| ||||| ||||||| ||||| ||||||||||||||||| ||| ||||||    || || ||| ||||||||||||    
T  18387646 attacttgtccccaaagtttctcacctattaattgtgaagtttctgtataaatagagagctcacacaatgcattttggaccccaaaaatcacagttgatg 18387547  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  18387546 attcctgtgcttttcctctct 18387526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 17963991 - 17964035
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| |||||||||||||||    
T  17963991 acacaccgaaattcacagttgatgcttcctgtgtttttcctctct 17964035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 2862852 - 2862938
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    |||||||| ||| |||||| | ||| || || ||||||| ||||||||||||||||||||||| | ||| ||||||| |||||||||    
T  2862852 attacttgttcccaaagttgcacacatactatttgtgaattttctctataaatagagagctcacatagttcattccatacaccgaaa 2862938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 412
Target Start/End: Original strand, 2759756 - 2759818
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctca 412  Q
    |||||||| ||  ||||||||| |||||||||||||||| ||||||| |||| ||||||||||    
T  2759756 attacttgttcaaaaagtttcttacttattagttgtgaattttctctgtaaacagagagctca 2759818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 363 - 436
Target Start/End: Complemental strand, 15641011 - 15640938
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    ||||||| |||| ||||||||||||| | ||||||||||||| ||||||| | | | ||||| |||||||||||    
T  15641011 aaagtttatcacgtattagttgtgaattctctctataaatagtgagctcacataattcattcaacacaccgaaa 15640938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 405
Target Start/End: Original strand, 14322789 - 14322845
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaataga 405  Q
    ||||||||| | | ||||||||||||||||||||||| || | ||||||||||||||    
T  14322789 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaataga 14322845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 470
Target Start/End: Original strand, 5600745 - 5600784
Alignment:
Q  431 ccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||| | |||||||||||||||||||||||||||    
T  5600745 ccgaaattcataattgatgcttccagtgtttttcctctct 5600784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 428 - 470
Target Start/End: Original strand, 11956474 - 11956516
Alignment:
Q  428 acaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    |||||||||||||||||||||| |||| ||| |||||||||||    
T  11956474 acaccgaaattcacagttgatgattcctgtgcttttcctctct 11956516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 85; Significance: 3e-40; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 35084 - 35204
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| |||| || |||||||||||||||||||||||||||||||||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  35084 attacttgctcccaaagcttgtcacttattagttgtgaactttctctataaatagagagctcacacagtgctttcgatacaccgaaattcacagttgatg 35183  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  35184 cttcctgtgcttttcctctct 35204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 3727 - 3847
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||   || |||||||||||||||||||    
T  3727 attacttgttcctaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcattctgaaccccgaaattcacagttgatg 3826  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  3827 cttcctgtgcttttcctctct 3847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 19602 - 19722
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||   || |||||||||||||||||||    
T  19602 attacttgttcctaaagtttctcacttattagttgtgaagtttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatg 19701  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||| ||||||    
T  19702 cttcctgtgctttttctctct 19722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 59140 - 59020
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||||| ||||||||||||| | ||||||    
T  59140 attacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagagagctcacataatgctttccatacaccgaaattcataattgatg 59041  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  59040 cttcctgtgcttttcctctct 59020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 408
Target Start/End: Complemental strand, 63342 - 63284
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagag 408  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  63342 attacttgatcccaaagtttctcacttattagttgtgaactttctctataaatagagag 63284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 620 - 740
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||||| | |||||||||||| ||||||| ||| | ||||||||||||||||||||||    
T  620 attacttgctcccaaagtttctcacttattagttatgaactttctctacatatagagagctcacacagtgctttcaatacaccgaaattcacagttgatg 719  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||  |||||||||||    
T  720 cttcctgtacttttcctctct 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 76; Significance: 6e-35; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 127104 - 126997
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 462  Q
    ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| ||| |||    
T  127104 aaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatgcttcctgtgcttt 127005  T
Q  463 tcctctct 470  Q
    || |||||    
T  127004 tcttctct 126997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0572 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0572
Description:

Target: scaffold0572; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 10355 - 10476
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10355 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10454  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||| ||||| |||||    
T  10455 gcttcctgtgcttttcttctct 10476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 12347 - 12468
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  12347 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 12446  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||| | ||| ||||| |||||    
T  12447 gctttctgtgattttcttctct 12468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 14856 - 14977
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  14856 cattacttgtttccaaagtttctcacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 14955  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||  ||| ||||| |||||    
T  14956 gcttcttgtgcttttcttctct 14977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 22022 - 21901
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | |||||||||||||||| |||||| |||| |||||||||||||||| |||| ||||||||||| |||||| ||||||||||||||||    
T  22022 cattacttgtttccaaagtttctcacttataagttgtaaactatctctataaatagagaactcacacagtgcattctacacactgaaattcacagttgat 21923  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||| ||||||||| |||||    
T  21922 gcttcctgtgtttttcttctct 21901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 71846 - 71741
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa-ttcacagttgat 448  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||| ||||||||||||    
T  71846 attacttgttcccaaagtttctcacttattagttgtgaattttctctataaatagagagctcacacagtgcattctacacaccaaaatttcacagttgat 71747  T
Q  449 gcttcc 454  Q
    ||||||    
T  71746 gcttcc 71741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 30981 - 30877
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| | | |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||| | ||||||||||||||||||||||    
T  30981 attacttgtttccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattcaagacaccgaaattcacagttgatg 30882  T
Q  450 cttcc 454  Q
    |||||    
T  30881 cttcc 30877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 24676 - 24796
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||   || |||||||||||||||||||    
T  24676 attacttgttcccaaagtttctcacttattagttgtgaaatttctctataaatagagagctcacacaatgcattctggaccccgaaattcacagttgatg 24775  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  24776 attcctgtgcttttcctctct 24796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 73; Significance: 4e-33; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 454
Target Start/End: Complemental strand, 30398 - 30294
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| ||||||| |||| |||||||||||||||||||    
T  30398 attacttgttcccaaagtttctcacctattagttgtgaaatttctctataaatagagagctcacacactgcattcgacaccccgaaattcacagttgatg 30299  T
Q  450 cttcc 454  Q
    |||||    
T  30298 cttcc 30294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 73; Significance: 4e-33; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 193647 - 193767
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||||| ||||| ||| |||||||   ||||||||||||||||||||||    
T  193647 attacttgttcccaaagtttctcacctattagttgtgaagtttctctataaatagagggctcacacaatgcattcaggacaccgaaattcacagttgatg 193746  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| |||||||||||    
T  193747 cttcctgtgcttttcctctct 193767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 470
Target Start/End: Original strand, 187962 - 188081
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||| ||||||||| |||||||||||||| || | ||| ||| |||||||   || ||||||| |||||||||||    
T  187962 attacttgttcc-aaagtttctcacctatcagttgtgaagtttctctataaatatagggttcacacaatgcattcaggaccccgaaatacacagttgatg 188060  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||| ||||| |||||    
T  188061 cttcctgtgcttttcttctct 188081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 349 - 463
Target Start/End: Complemental strand, 7592 - 7478
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  7592 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 7493  T
Q  449 gcttccagtgttttt 463  Q
    |||||| ||| ||||    
T  7492 gcttcctgtgctttt 7478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Complemental strand, 7103 - 6982
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||| ||||||||||||| |||| |||||||||||||||| |||| ||||||||||| ||||||||||||||| |||||||    
T  7103 cattacttgtttccaaagtttctaacttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacaccgaaattcatagttgat 7004  T
Q  449 gcttccagtgtttttcctctct 470  Q
    |||||  ||| |||||||||||    
T  7003 gcttcatgtgcttttcctctct 6982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 10805 - 10926
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10805 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 10904  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||| ||| ||||| |||||    
T  10905 acttcctgtgcttttcttctct 10926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 31964 - 32085
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  31964 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 32063  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||| ||| ||||| |||||    
T  32064 acttcctgtgcttttcttctct 32085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 13391 - 13512
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  13391 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 13490  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||| ||| ||||| |||||    
T  13491 acttcctgtgcttttcttctct 13512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 21365 - 21486
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  21365 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 21464  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||| ||| ||||| |||||    
T  21465 acttcctgtgcttttcttctct 21486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 454
Target Start/End: Complemental strand, 121281 - 121176
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  121281 cattacttgtttccaaagtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 121182  T
Q  449 gcttcc 454  Q
    ||||||    
T  121181 gcttcc 121176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 349 - 470
Target Start/End: Original strand, 35390 - 35511
Alignment:
Q  349 cattacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||||| | | ||||||||||||||||||||||| |||  |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  35390 cattacttgtttccaaagtttctcacttattagttgtaaacaatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgat 35489  T
Q  449 gcttccagtgtttttcctctct 470  Q
     ||||| ||| ||||| |||||    
T  35490 acttcctgtgcttttcttctct 35511  T

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Target: scaffold1910 (Bit Score: 69; Significance: 9e-31; HSPs: 1)
Name: scaffold1910
Description:

Target: scaffold1910; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 580 - 460
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    ||||||||  || |||||||||||| ||||||||||||| ||||||||||||||||||||||| ||| |||||||   | ||||||||||||||||||||    
T  580 attacttgtccccaaagtttctcacctattagttgtgaagtttctctataaatagagagctcacacaatgcattctggataccgaaattcacagttgatg 481  T
Q  450 cttccagtgtttttcctctct 470  Q
    ||||| ||||||||| |||||    
T  480 cttcctgtgtttttcttctct 460  T

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Target: scaffold0044 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 81272 - 81152
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||||||| |||| |||||||||||||||||||    
T  81272 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcattcaacaccccgaaattcacagttgatg 81173  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||| ||| |||||||||||    
T  81172 attcctgtgcttttcctctct 81152  T

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Target: scaffold0044; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 350 - 470
Target Start/End: Complemental strand, 64874 - 64754
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatg 449  Q
    |||||||| ||| |||||||||||| ||||||||| ||| ||||||||||||||||| ||||| ||| ||| | | |||| |||||||||||||||||||    
T  64874 attacttgttcccaaagtttctcacctattagttgggaagtttctctataaatagagggctcacacaatgcgtacaacaccccgaaattcacagttgatg 64775  T
Q  450 cttccagtgtttttcctctct 470  Q
     |||  ||| |||||||||||    
T  64774 attcatgtgcttttcctctct 64754  T

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Target: scaffold0575 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 363 - 470
Target Start/End: Original strand, 5274 - 5381
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 462  Q
    ||||||||||||||||||||||| |||| || ||||||||||||| |||| ||||||||| | ||||||||||||||||||||||||||||| ||| |||    
T  5274 aaagtttctcacttattagttgtaaactatccctataaatagagaactcacacagtgcatcctacacaccgaaattcacagttgatgcttcctgtgcttt 5373  T
Q  463 tcctctct 470  Q
    || |||||    
T  5374 tcttctct 5381  T

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Target: scaffold0415 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 1186 - 1082
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    |||||||||||||||||||| || | |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||| ||| |||||     
T  1186 gtttctcacttattagttgtaaattatctctataaatagagaactcacacagtgcattctacacaccgaaattcacagttgatacttcctgtgcttttct 1087  T
Q  466 tctct 470  Q
    |||||    
T  1086 tctct 1082  T

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Target: scaffold0292 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 363 - 470
Target Start/End: Complemental strand, 7868 - 7761
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttt 462  Q
    |||||||||| |||||||||||| |||| |||||||||||||||| |||| ||||||||||| |||||| |||||||||| || |||||||| ||| |||    
T  7868 aaagtttctcgcttattagttgtaaactatctctataaatagagaactcacacagtgcattctacacacagaaattcacaatttatgcttcctgtgattt 7769  T
Q  463 tcctctct 470  Q
    || |||||    
T  7768 tcttctct 7761  T

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Target: scaffold0004 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 366 - 470
Target Start/End: Complemental strand, 199888 - 199786
Alignment:
Q  366 gtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcc 465  Q
    ||||||||| ||||||||| ||| ||||||||||||||||||||||| ||| |||||||     |||||||||||||||||||| |||| ||| ||||||    
T  199888 gtttctcacctattagttgcgaagtttctctataaatagagagctcacacaatgcattc--tggaccgaaattcacagttgatgattcctgtgcttttcc 199791  T
Q  466 tctct 470  Q
    |||||    
T  199790 tctct 199786  T

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Target: scaffold0008 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 350 - 432
Target Start/End: Complemental strand, 256526 - 256444
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacacc 432  Q
    |||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||  ||| | |||||||| ||||||||    
T  256526 attacttgttcccaaagtttctcacttattagttgtgaatattctctataaatagagaaatcacatagtgcatttcacacacc 256444  T

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Target: scaffold0155 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 470
Target Start/End: Complemental strand, 22337 - 22269
Alignment:
Q  402 tagagagctcatacagtgcattccacacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||| ||| |||||||   || |||||||||||||||||||||||| ||| |||||||||||    
T  22337 tagagagctcacacaatgcattctggaccccgaaattcacagttgatgcttcctgtggttttcctctct 22269  T

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Target: scaffold0096 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 448
Target Start/End: Complemental strand, 22372 - 22325
Alignment:
Q  401 atagagagctcatacagtgcattccacacaccgaaattcacagttgat 448  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  22372 atagagaactcacacagtgcattctacacaccgaaattcacagttgat 22325  T

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Target: scaffold0478 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0478
Description:

Target: scaffold0478; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 8301 - 8215
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    |||||||| ||| |||||||||||| |||||||| |||  |||||||||||||||  || |||   ||| |||||||||||||||||    
T  8301 attacttgttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacctagttcattccacacaccgaaa 8215  T

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Target: scaffold0932 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0932
Description:

Target: scaffold0932; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 1020 - 1105
Alignment:
Q  351 ttacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    ||||||| ||| |||||||||||| |||||||| |||  |||||||||||||||  || |||   ||| |||||||||||||||||    
T  1020 ttacttgttcccaaagtttctcacatattagttatgatttttctctataaataggtagatcacgtagttcattccacacaccgaaa 1105  T

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Target: scaffold0232 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 370 - 431
Target Start/End: Complemental strand, 22644 - 22583
Alignment:
Q  370 ctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacac 431  Q
    |||||||||||||||| |||| || ||||||||||||| |||  ||||||||||| ||||||    
T  22644 ctcacttattagttgtaaactatccctataaatagagaactctcacagtgcattctacacac 22583  T

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Target: scaffold0232; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 11832 - 11788
Alignment:
Q  426 acacaccgaaattcacagttgatgcttccagtgtttttcctctct 470  Q
    ||||||||||||||||||||||||||||| ||| ||||| |||||    
T  11832 acacaccgaaattcacagttgatgcttcctgtgcttttcttctct 11788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 363 - 407
Target Start/End: Original strand, 6910 - 6954
Alignment:
Q  363 aaagtttctcacttattagttgtgaactttctctataaatagaga 407  Q
    ||||||||||||||||||||||| |||| || |||||||||||||    
T  6910 aaagtttctcacttattagttgtaaactatccctataaatagaga 6954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0720 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 5931 - 5985
Alignment:
Q  350 attacttgctcctaaagtttctcacttattagttgtgaactttctctataaatag 404  Q
    |||||||| ||| |||||||||||| |||||||||||   |||||||||||||||    
T  5931 attacttgttccgaaagtttctcacatattagttgtgctttttctctataaatag 5985  T

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Target: scaffold0131 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 8344 - 8261
Alignment:
Q  352 tacttgctcctaaagtttctcacttattagttgtgaactttctctataaatagagagctcatacagtgcattccacacaccgaaa 436  Q
    |||||| ||| ||| ||||| ||  ||||| |||||||||||||||||||| |||||||| || ||| || |||| |||||||||    
T  8344 tacttgttcccaaaatttctaacacattagatgtgaactttctctataaat-gagagctcgtatagttcactccatacaccgaaa 8261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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