View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0849_high_31 (Length: 251)
Name: NF0849_high_31
Description: NF0849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0849_high_31 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 4 - 251
Target Start/End: Original strand, 40743561 - 40743806
Alignment:
| Q |
4 |
ggaggagcagagaccatccttccttttagcttgatgtccattttaaaatctacagtattataatcctattttggctgtgttgatgttcaacaactagctt |
103 |
Q |
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| T |
40743561 |
ggaggatcagtgaccatccttcctt--agcttgatgtccattttaaaatctacagtattataatcctattttggctgtgttgatgttcaacaactagctt |
40743658 |
T |
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| Q |
104 |
agttagatttctaagatactcacctaatgggaatttaaacattaattcagctcaatattgaccgacctattacgtaatagacaattcaactgtttttgtc |
203 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40743659 |
agttagatttctaagatactcacctaatgggaatttaaacattaattcagctcaatattgaccgacctattacgtaatagacaattcaactgtttttgtc |
40743758 |
T |
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| Q |
204 |
ttcaactatttggagcttctcacgatctaatctagacttgatggtatt |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40743759 |
ttcaactatttggagcttctcacgatctaatctagacttgatggtatt |
40743806 |
T |
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