View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0849_low_13 (Length: 386)

Name: NF0849_low_13
Description: NF0849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0849_low_13
NF0849_low_13
[»] chr7 (109 HSPs)
chr7 (1-383)||(4818702-4819084)
chr7 (1-383)||(4785702-4786083)
chr7 (132-273)||(7318269-7318411)
chr7 (132-269)||(10586989-10587127)
chr7 (138-383)||(16365707-16365948)
chr7 (153-383)||(3734614-3734838)
chr7 (138-342)||(17153049-17153251)
chr7 (135-263)||(8054457-8054589)
chr7 (121-382)||(9731485-9731741)
chr7 (132-383)||(15869591-15869837)
chr7 (153-273)||(8313353-8313476)
chr7 (132-271)||(9574403-9574543)
chr7 (132-273)||(4986551-4986693)
chr7 (132-273)||(4990649-4990791)
chr7 (138-235)||(13759859-13759957)
chr7 (136-233)||(18662441-18662539)
chr7 (121-233)||(2563803-2563915)
chr7 (132-210)||(9864350-9864429)
chr7 (132-271)||(23099916-23100055)
chr7 (121-213)||(3329679-3329772)
chr7 (120-383)||(5108550-5108807)
chr7 (131-207)||(10937597-10937674)
chr7 (134-234)||(31492928-31493029)
chr7 (153-236)||(18368978-18369061)
chr7 (159-273)||(3191020-3191134)
chr7 (139-381)||(7492126-7492358)
chr7 (153-234)||(8979006-8979087)
chr7 (158-235)||(11803103-11803180)
chr7 (121-239)||(6042446-6042564)
chr7 (132-246)||(1584541-1584654)
chr7 (132-233)||(21230308-21230410)
chr7 (121-213)||(2350768-2350861)
chr7 (132-273)||(12181604-12181746)
chr7 (135-235)||(1848226-1848325)
chr7 (135-263)||(8054029-8054158)
chr7 (143-234)||(10648585-10648677)
chr7 (161-251)||(17077154-17077247)
chr7 (132-273)||(1587677-1587818)
chr7 (136-209)||(11221189-11221263)
chr7 (131-207)||(18449237-18449314)
chr7 (288-383)||(39273032-39273126)
chr7 (293-364)||(9131065-9131134)
chr7 (123-234)||(16297820-16297932)
chr7 (132-202)||(5797507-5797578)
chr7 (132-270)||(6013589-6013728)
chr7 (135-251)||(13418533-13418653)
chr7 (158-233)||(18467474-18467549)
chr7 (157-235)||(4449002-4449080)
chr7 (132-233)||(5530017-5530119)
chr7 (132-233)||(10584487-10584589)
chr7 (153-235)||(39273174-39273256)
chr7 (288-383)||(1848085-1848177)
chr7 (133-233)||(4579095-4579195)
chr7 (305-361)||(7397308-7397362)
chr7 (138-207)||(21102320-21102389)
chr7 (309-383)||(6042621-6042691)
chr7 (132-249)||(12329678-12329797)
chr7 (132-210)||(14755154-14755233)
chr7 (288-364)||(20582405-20582479)
chr7 (134-207)||(21912507-21912581)
chr7 (288-383)||(8978862-8978956)
chr7 (131-207)||(9916561-9916638)
chr7 (131-207)||(9924473-9924550)
chr7 (158-235)||(17203047-17203123)
chr7 (12-85)||(19008671-19008744)
chr7 (131-184)||(33035468-33035521)
chr7 (293-364)||(18662595-18662663)
chr7 (135-251)||(20582258-20582375)
chr7 (132-234)||(1872781-1872884)
chr7 (132-206)||(7397192-7397266)
chr7 (132-210)||(9500440-9500519)
chr7 (157-235)||(16059020-16059099)
chr7 (223-273)||(1584320-1584370)
chr7 (135-205)||(7748115-7748184)
chr7 (131-205)||(7782556-7782630)
chr7 (288-364)||(8053938-8054012)
chr7 (132-233)||(9245177-9245279)
chr7 (158-211)||(22067248-22067302)
chr7 (56-89)||(4676395-4676428)
chr7 (155-200)||(8877441-8877486)
chr7 (132-213)||(9130902-9130985)
chr7 (131-207)||(12391180-12391257)
chr7 (301-342)||(16297729-16297770)
chr7 (119-199)||(16306677-16306758)
chr7 (131-207)||(23093305-23093381)
chr7 (309-364)||(16058908-16058961)
chr7 (161-233)||(18466031-18466103)
chr7 (153-233)||(18495391-18495471)
chr7 (136-199)||(18661590-18661654)
chr7 (344-383)||(3329499-3329537)
chr7 (131-193)||(9866582-9866644)
chr7 (132-246)||(19153294-19153407)
chr7 (305-336)||(19153462-19153493)
chr7 (132-246)||(20752693-20752806)
chr7 (305-336)||(20752861-20752892)
chr7 (131-193)||(26134789-26134851)
chr7 (309-354)||(3329542-3329585)
chr7 (132-233)||(14195974-14196075)
chr7 (346-383)||(2350568-2350605)
chr7 (288-383)||(2563967-2564060)
chr7 (303-383)||(18368836-18368913)
chr7 (132-233)||(21885157-21885255)
chr7 (164-213)||(22339332-22339381)
chr7 (177-233)||(6005878-6005934)
chr7 (153-209)||(9261222-9261278)
chr7 (288-383)||(9574557-9574648)
chr7 (309-364)||(13289294-13289347)
chr7 (153-189)||(21227197-21227233)
chr7 (58-86)||(27509380-27509408)
[»] chr3 (81 HSPs)
chr3 (121-381)||(16245589-16245843)
chr3 (119-383)||(21303212-21303470)
chr3 (132-273)||(12805851-12805993)
chr3 (121-273)||(2167579-2167730)
chr3 (121-235)||(21301903-21302018)
chr3 (132-273)||(21325336-21325479)
chr3 (138-235)||(17438430-17438527)
chr3 (153-273)||(8319057-8319177)
chr3 (132-246)||(3116407-3116521)
chr3 (119-383)||(41508350-41508608)
chr3 (132-209)||(6289899-6289977)
chr3 (134-235)||(12411149-12411251)
chr3 (153-233)||(821515-821595)
chr3 (132-336)||(5508332-5508532)
chr3 (132-210)||(10744898-10744977)
chr3 (132-210)||(10917914-10917993)
chr3 (132-207)||(13908253-13908328)
chr3 (137-235)||(22349410-22349509)
chr3 (131-207)||(12759382-12759459)
chr3 (131-188)||(51119289-51119346)
chr3 (153-213)||(19171855-19171915)
chr3 (153-232)||(4650249-4650328)
chr3 (135-236)||(932742-932843)
chr3 (153-207)||(8557156-8557210)
chr3 (157-235)||(8889151-8889229)
chr3 (132-233)||(21825870-21825971)
chr3 (135-235)||(8770019-8770119)
chr3 (131-207)||(28728939-28729016)
chr3 (309-364)||(8170042-8170095)
chr3 (309-364)||(12754798-12754851)
chr3 (317-380)||(17438290-17438351)
chr3 (136-235)||(19908307-19908407)
chr3 (156-236)||(19925621-19925701)
chr3 (309-383)||(7494971-7495043)
chr3 (136-194)||(11518001-11518060)
chr3 (309-362)||(16229831-16229882)
chr3 (153-271)||(20429728-20429845)
chr3 (131-193)||(21083306-21083368)
chr3 (309-358)||(27413778-27413825)
chr3 (309-364)||(19908478-19908531)
chr3 (309-364)||(19909848-19909901)
chr3 (305-383)||(2167475-2167549)
chr3 (123-193)||(18458465-18458536)
chr3 (132-210)||(18736696-18736774)
chr3 (154-205)||(21019625-21019675)
chr3 (121-249)||(7478319-7478444)
chr3 (157-211)||(16229965-16230019)
chr3 (132-213)||(31286037-31286117)
chr3 (218-271)||(2723798-2723851)
chr3 (301-364)||(8770170-8770231)
chr3 (302-364)||(4650389-4650449)
chr3 (155-235)||(8765137-8765217)
chr3 (343-383)||(12411350-12411390)
chr3 (160-235)||(27413881-27413957)
chr3 (138-193)||(27542956-27543011)
chr3 (309-383)||(7478211-7478283)
chr3 (305-383)||(8143781-8143854)
chr3 (158-213)||(8445846-8445900)
chr3 (288-339)||(10745051-10745101)
chr3 (56-87)||(12565816-12565847)
chr3 (56-87)||(13155735-13155766)
chr3 (56-87)||(13260219-13260250)
chr3 (131-233)||(20339765-20339867)
chr3 (146-193)||(52517834-52517880)
chr3 (153-207)||(10923165-10923219)
chr3 (288-365)||(12805765-12805839)
chr3 (313-374)||(19171732-19171791)
chr3 (301-357)||(19925504-19925559)
chr3 (288-364)||(21302068-21302143)
chr3 (317-361)||(932921-932963)
chr3 (153-249)||(7495079-7495171)
chr3 (58-87)||(7791566-7791595)
chr3 (301-364)||(8765268-8765329)
chr3 (198-271)||(17155855-17155928)
chr3 (131-199)||(19706831-19706899)
chr3 (288-364)||(21325491-21325564)
chr3 (12-81)||(27397886-27397955)
chr3 (7-80)||(29626072-29626145)
chr3 (288-336)||(3116321-3116369)
chr3 (132-207)||(7147984-7148059)
chr3 (305-356)||(18736556-18736604)
[»] chr2 (60 HSPs)
chr2 (132-273)||(20174596-20174738)
chr2 (121-383)||(25618542-25618797)
chr2 (132-383)||(32085459-32085704)
chr2 (122-239)||(29719226-29719344)
chr2 (121-213)||(15339223-15339316)
chr2 (135-235)||(17743475-17743576)
chr2 (153-236)||(25196028-25196111)
chr2 (135-235)||(28925521-28925621)
chr2 (121-207)||(25888247-25888334)
chr2 (157-235)||(25535296-25535374)
chr2 (153-235)||(45621880-45621962)
chr2 (135-235)||(27909118-27909219)
chr2 (132-271)||(25885423-25885562)
chr2 (288-383)||(26603217-26603309)
chr2 (121-273)||(31804862-31805014)
chr2 (137-273)||(11382715-11382851)
chr2 (127-244)||(9774325-9774440)
chr2 (132-233)||(45553126-45553228)
chr2 (131-207)||(8503097-8503174)
chr2 (288-383)||(27908975-27909068)
chr2 (121-249)||(17349343-17349472)
chr2 (288-383)||(25887760-25887853)
chr2 (135-251)||(17635755-17635875)
chr2 (157-235)||(24090925-24091003)
chr2 (157-211)||(25530469-25530523)
chr2 (132-235)||(12953293-12953397)
chr2 (121-185)||(20173347-20173411)
chr2 (158-234)||(27418389-27418465)
chr2 (173-273)||(28606139-28606239)
chr2 (131-205)||(8447079-8447153)
chr2 (121-235)||(26603349-26603464)
chr2 (153-211)||(30411696-30411754)
chr2 (288-383)||(17349497-17349591)
chr2 (288-383)||(30411816-30411909)
chr2 (135-210)||(17675654-17675730)
chr2 (132-239)||(19200130-19200237)
chr2 (132-246)||(13776335-13776449)
chr2 (301-374)||(29719097-29719169)
chr2 (133-271)||(23011725-23011864)
chr2 (309-364)||(26667465-26667518)
chr2 (153-233)||(28770444-28770524)
chr2 (153-273)||(29027514-29027634)
chr2 (293-378)||(15339392-15339476)
chr2 (132-233)||(5777213-5777314)
chr2 (311-364)||(17198029-17198080)
chr2 (131-207)||(12557736-12557812)
chr2 (309-342)||(31804794-31804827)
chr2 (317-364)||(28925700-28925745)
chr2 (56-88)||(40499636-40499668)
chr2 (131-205)||(25070123-25070197)
chr2 (172-235)||(25920303-25920366)
chr2 (157-235)||(26667339-26667418)
chr2 (52-85)||(15508298-15508331)
chr2 (288-383)||(17675485-17675578)
chr2 (58-87)||(36817803-36817832)
chr2 (137-208)||(17889938-17890009)
chr2 (131-202)||(18553939-18554010)
chr2 (317-364)||(24090814-24090859)
chr2 (317-364)||(25530614-25530659)
chr2 (317-364)||(25535440-25535485)
[»] chr6 (73 HSPs)
chr6 (121-383)||(12183188-12183445)
chr6 (121-249)||(23143707-23143838)
chr6 (119-246)||(21672423-21672551)
chr6 (119-246)||(21679839-21679967)
chr6 (132-271)||(21907428-21907568)
chr6 (132-273)||(22567836-22567978)
chr6 (132-271)||(11176946-11177086)
chr6 (161-273)||(28933621-28933733)
chr6 (132-233)||(9726018-9726120)
chr6 (138-382)||(23844322-23844562)
chr6 (132-363)||(27737565-27737792)
chr6 (153-249)||(22410311-22410408)
chr6 (137-251)||(9516786-9516904)
chr6 (123-273)||(4339722-4339873)
chr6 (132-273)||(8241273-8241413)
chr6 (124-213)||(17729140-17729230)
chr6 (132-273)||(21688756-21688898)
chr6 (132-273)||(15466366-15466508)
chr6 (121-263)||(18075360-18075502)
chr6 (141-213)||(23645788-23645861)
chr6 (132-232)||(25927305-25927406)
chr6 (153-233)||(22566163-22566243)
chr6 (301-383)||(14637030-14637110)
chr6 (159-273)||(9838380-9838494)
chr6 (153-235)||(23231982-23232064)
chr6 (137-213)||(20005900-20005977)
chr6 (119-184)||(14079494-14079560)
chr6 (157-235)||(24657454-24657532)
chr6 (141-233)||(17299832-17299925)
chr6 (158-235)||(17827091-17827168)
chr6 (138-251)||(27124473-27124589)
chr6 (131-207)||(28586057-28586134)
chr6 (121-184)||(5624625-5624689)
chr6 (288-383)||(5624790-5624883)
chr6 (316-383)||(14079314-14079379)
chr6 (153-213)||(19244603-19244663)
chr6 (132-273)||(8039097-8039234)
chr6 (157-235)||(22413048-22413126)
chr6 (157-235)||(23009394-23009471)
chr6 (157-235)||(23778893-23778970)
chr6 (153-273)||(6630653-6630771)
chr6 (131-202)||(20722209-20722279)
chr6 (132-184)||(21932102-21932155)
chr6 (132-183)||(20145111-20145163)
chr6 (132-183)||(22187676-22187728)
chr6 (136-230)||(24251516-24251611)
chr6 (176-235)||(24252228-24252287)
chr6 (317-383)||(24475234-24475298)
chr6 (132-189)||(7543005-7543063)
chr6 (157-235)||(21841687-21841765)
chr6 (3-81)||(23124178-23124256)
chr6 (153-206)||(17382163-17382216)
chr6 (303-383)||(17883699-17883776)
chr6 (131-207)||(28589457-28589534)
chr6 (132-234)||(9898958-9899062)
chr6 (132-235)||(17883784-17883887)
chr6 (309-364)||(20005793-20005846)
chr6 (317-364)||(24657344-24657389)
chr6 (138-185)||(26587622-26587670)
chr6 (23-87)||(32333541-32333605)
chr6 (301-383)||(6630548-6630627)
chr6 (132-213)||(2586717-2586798)
chr6 (288-364)||(9838506-9838579)
chr6 (309-364)||(11136067-11136121)
chr6 (303-362)||(1635127-1635183)
chr6 (46-78)||(14691079-14691111)
chr6 (56-84)||(14964986-14965014)
chr6 (133-176)||(20002440-20002484)
chr6 (316-383)||(20144978-20145043)
chr6 (316-383)||(22187796-22187861)
chr6 (131-207)||(26215414-26215489)
chr6 (138-173)||(34092327-34092363)
chr6 (153-229)||(34478543-34478618)
[»] scaffold0622 (1 HSPs)
scaffold0622 (132-273)||(724-867)
[»] chr5 (63 HSPs)
chr5 (122-249)||(25550487-25550617)
chr5 (132-268)||(18208215-18208351)
chr5 (132-271)||(24266917-24267057)
chr5 (132-271)||(24343548-24343688)
chr5 (132-268)||(18937744-18937879)
chr5 (153-273)||(34487656-34487776)
chr5 (153-273)||(19283816-19283936)
chr5 (135-213)||(15375903-15375982)
chr5 (132-273)||(15690774-15690914)
chr5 (132-273)||(22755517-22755659)
chr5 (135-235)||(19004225-19004326)
chr5 (155-235)||(23388837-23388917)
chr5 (138-232)||(19086181-19086276)
chr5 (137-235)||(24245543-24245642)
chr5 (132-273)||(25402299-25402440)
chr5 (132-210)||(15469932-15470011)
chr5 (132-234)||(17171553-17171656)
chr5 (153-236)||(24140460-24140543)
chr5 (153-252)||(20315408-20315511)
chr5 (132-233)||(24852173-24852275)
chr5 (153-233)||(17185481-17185561)
chr5 (137-236)||(17431884-17431984)
chr5 (135-213)||(34128636-34128714)
chr5 (132-213)||(24167605-24167687)
chr5 (119-235)||(19051532-19051648)
chr5 (317-380)||(20744529-20744590)
chr5 (172-235)||(20549703-20549766)
chr5 (153-236)||(39434480-39434563)
chr5 (157-235)||(17315099-17315177)
chr5 (157-235)||(20858707-20858785)
chr5 (131-233)||(23014611-23014712)
chr5 (132-236)||(26110460-26110564)
chr5 (293-364)||(34128790-34128859)
chr5 (137-213)||(36175135-36175211)
chr5 (301-383)||(15690940-15691017)
chr5 (317-383)||(17432061-17432125)
chr5 (157-235)||(20564079-20564158)
chr5 (317-383)||(24245401-24245464)
chr5 (196-270)||(24662140-24662214)
chr5 (132-213)||(26120861-26120942)
chr5 (132-213)||(26121345-26121426)
chr5 (157-235)||(28664796-28664874)
chr5 (288-372)||(26121191-26121273)
chr5 (303-383)||(36175298-36175374)
chr5 (309-360)||(20549597-20549646)
chr5 (146-202)||(26502130-26502185)
chr5 (131-205)||(15544046-15544120)
chr5 (131-205)||(28253276-28253350)
chr5 (288-364)||(17314988-17315062)
chr5 (309-362)||(20563969-20564020)
chr5 (132-233)||(24656854-24656956)
chr5 (57-87)||(36226216-36226246)
chr5 (131-207)||(23380284-23380361)
chr5 (131-199)||(32417391-32417459)
chr5 (316-383)||(15375752-15375816)
chr5 (138-174)||(15492955-15492991)
chr5 (309-364)||(16523678-16523731)
chr5 (288-336)||(18937897-18937945)
chr5 (317-364)||(20858851-20858896)
chr5 (288-383)||(24265332-24265424)
chr5 (288-383)||(24341963-24342055)
chr5 (153-233)||(29263582-29263661)
chr5 (56-84)||(30841429-30841457)
[»] chr8 (60 HSPs)
chr8 (132-273)||(34497111-34497254)
chr8 (132-273)||(14528145-14528287)
chr8 (132-273)||(30806453-30806600)
chr8 (132-273)||(19786727-19786869)
chr8 (121-251)||(24114262-24114396)
chr8 (153-383)||(25182284-25182509)
chr8 (132-235)||(29382360-29382464)
chr8 (133-233)||(24904630-24904731)
chr8 (138-213)||(17101914-17101990)
chr8 (309-383)||(24269767-24269839)
chr8 (123-235)||(24269585-24269697)
chr8 (146-251)||(27659455-27659564)
chr8 (155-236)||(17509266-17509347)
chr8 (121-249)||(13314975-13315105)
chr8 (173-273)||(13697893-13697993)
chr8 (288-383)||(18448398-18448491)
chr8 (148-271)||(21314636-21314757)
chr8 (141-210)||(2637603-2637673)
chr8 (132-233)||(5850937-5851039)
chr8 (137-207)||(26615269-26615339)
chr8 (132-232)||(15238795-15238896)
chr8 (121-193)||(24110696-24110769)
chr8 (309-383)||(13314850-13314920)
chr8 (132-213)||(6884954-6885035)
chr8 (132-213)||(30122176-30122257)
chr8 (328-383)||(24114140-24114193)
chr8 (131-202)||(26008018-26008090)
chr8 (317-380)||(26394559-26394619)
chr8 (132-210)||(17976615-17976694)
chr8 (153-251)||(18448522-18448623)
chr8 (317-383)||(24110526-24110590)
chr8 (141-203)||(30783772-30783835)
chr8 (153-207)||(14075612-14075666)
chr8 (132-213)||(28276779-28276860)
chr8 (131-207)||(31288353-31288429)
chr8 (153-210)||(44011048-44011104)
chr8 (131-193)||(14006090-14006153)
chr8 (157-235)||(23893200-23893278)
chr8 (306-340)||(24645008-24645042)
chr8 (219-271)||(26394646-26394697)
chr8 (288-336)||(6885107-6885155)
chr8 (175-235)||(16403952-16404012)
chr8 (135-202)||(17972171-17972237)
chr8 (288-342)||(27659584-27659639)
chr8 (132-193)||(5052962-5053024)
chr8 (318-383)||(7983760-7983822)
chr8 (155-193)||(24723482-24723520)
chr8 (153-207)||(28317432-28317485)
chr8 (132-177)||(30235373-30235419)
chr8 (58-87)||(3739295-3739324)
chr8 (288-340)||(13698005-13698055)
chr8 (288-383)||(17101762-17101855)
chr8 (153-206)||(24644856-24644908)
chr8 (137-213)||(25226137-25226214)
chr8 (56-89)||(43921934-43921967)
chr8 (59-87)||(1170258-1170286)
chr8 (309-341)||(14626200-14626232)
chr8 (317-364)||(16404079-16404124)
chr8 (310-357)||(29382243-29382288)
chr8 (305-360)||(44010903-44010956)
[»] chr4 (72 HSPs)
chr4 (119-273)||(17671985-17672140)
chr4 (132-383)||(14648891-14649136)
chr4 (121-273)||(12578227-12578380)
chr4 (121-273)||(19636548-19636699)
chr4 (132-235)||(13692668-13692772)
chr4 (132-271)||(5679201-5679341)
chr4 (136-235)||(13908854-13908954)
chr4 (119-383)||(24639318-24639569)
chr4 (132-262)||(11490528-11490659)
chr4 (132-273)||(19092291-19092433)
chr4 (133-269)||(19929640-19929777)
chr4 (146-383)||(17336991-17337223)
chr4 (133-273)||(22175924-22176064)
chr4 (132-273)||(13128837-13128977)
chr4 (132-273)||(17951257-17951399)
chr4 (132-273)||(17955109-17955251)
chr4 (135-231)||(17216816-17216913)
chr4 (136-233)||(20315000-20315098)
chr4 (121-272)||(40227762-40227911)
chr4 (153-213)||(7582315-7582375)
chr4 (120-231)||(13992879-13992991)
chr4 (137-235)||(19492699-19492798)
chr4 (132-233)||(19882636-19882738)
chr4 (153-273)||(22357493-22357616)
chr4 (132-235)||(21323874-21323978)
chr4 (309-383)||(19492568-19492640)
chr4 (121-235)||(19562177-19562292)
chr4 (138-207)||(11093966-11094036)
chr4 (288-383)||(13909003-13909097)
chr4 (137-235)||(15164768-15164867)
chr4 (136-201)||(17709757-17709823)
chr4 (132-233)||(25121227-25121328)
chr4 (288-383)||(7582446-7582540)
chr4 (132-232)||(3774821-3774923)
chr4 (132-210)||(9737528-9737612)
chr4 (301-383)||(13692537-13692618)
chr4 (309-364)||(17026219-17026272)
chr4 (142-205)||(10589719-10589781)
chr4 (132-210)||(15047124-15047203)
chr4 (132-210)||(15107221-15107300)
chr4 (131-205)||(19900575-19900649)
chr4 (157-235)||(25094589-25094668)
chr4 (138-207)||(11521218-11521288)
chr4 (288-364)||(19562050-19562125)
chr4 (132-209)||(20829764-20829841)
chr4 (318-386)||(11935237-11935303)
chr4 (293-364)||(12406578-12406648)
chr4 (288-364)||(25121102-25121175)
chr4 (153-249)||(8969707-8969802)
chr4 (119-234)||(9052657-9052772)
chr4 (132-183)||(12318429-12318481)
chr4 (131-205)||(10107006-10107080)
chr4 (132-234)||(11933415-11933517)
chr4 (141-207)||(22526369-22526436)
chr4 (165-235)||(16730398-16730468)
chr4 (131-179)||(1833648-1833697)
chr4 (121-166)||(11935176-11935221)
chr4 (138-213)||(19374834-19374909)
chr4 (157-236)||(25097856-25097936)
chr4 (56-87)||(20702108-20702139)
chr4 (293-383)||(22357388-22357476)
chr4 (309-363)||(25097992-25098044)
chr4 (19-81)||(893646-893708)
chr4 (132-193)||(11700610-11700672)
chr4 (57-87)||(35603423-35603453)
chr4 (58-87)||(4609118-4609147)
chr4 (131-179)||(15050138-15050186)
chr4 (131-179)||(15104238-15104286)
chr4 (157-210)||(43941811-43941864)
chr4 (83-115)||(9828518-9828550)
chr4 (58-86)||(10249082-10249110)
chr4 (128-179)||(13787192-13787244)
[»] scaffold0005 (2 HSPs)
scaffold0005 (132-273)||(168260-168401)
scaffold0005 (288-383)||(168156-168248)
[»] chr1 (82 HSPs)
chr1 (121-383)||(13345194-13345450)
chr1 (119-273)||(17359145-17359297)
chr1 (120-235)||(21449073-21449189)
chr1 (132-270)||(22664202-22664341)
chr1 (132-273)||(24281273-24281415)
chr1 (132-273)||(147627-147768)
chr1 (135-251)||(12208600-12208720)
chr1 (135-251)||(25405610-25405730)
chr1 (137-235)||(17610255-17610354)
chr1 (135-251)||(15543946-15544066)
chr1 (140-273)||(33190681-33190815)
chr1 (135-251)||(14779564-14779684)
chr1 (155-251)||(21666588-21666687)
chr1 (153-268)||(24214562-24214677)
chr1 (139-262)||(16179010-16179137)
chr1 (135-235)||(18736239-18736340)
chr1 (132-231)||(21847630-21847729)
chr1 (132-239)||(23038007-23038114)
chr1 (313-383)||(21449252-21449320)
chr1 (132-273)||(9787840-9787982)
chr1 (132-233)||(17837513-17837615)
chr1 (135-251)||(29242518-29242638)
chr1 (121-374)||(28008090-28008338)
chr1 (121-242)||(15813516-15813639)
chr1 (132-273)||(22620258-22620400)
chr1 (135-200)||(24306339-24306405)
chr1 (301-380)||(17610115-17610193)
chr1 (303-383)||(21334574-21334652)
chr1 (135-235)||(21987981-21988082)
chr1 (155-235)||(16069550-16069630)
chr1 (160-263)||(51473849-51473950)
chr1 (132-206)||(12012828-12012903)
chr1 (293-383)||(17121359-17121444)
chr1 (309-383)||(17359332-17359404)
chr1 (132-213)||(3591674-3591756)
chr1 (135-251)||(21334699-21334819)
chr1 (155-213)||(22622910-22622968)
chr1 (132-233)||(24267783-24267885)
chr1 (131-199)||(26540891-26540959)
chr1 (153-249)||(31236032-31236129)
chr1 (132-235)||(16787725-16787829)
chr1 (309-364)||(16916821-16916874)
chr1 (157-236)||(16916931-16917011)
chr1 (132-207)||(27117745-27117821)
chr1 (153-213)||(44795387-44795446)
chr1 (288-377)||(12208751-12208838)
chr1 (309-383)||(15543823-15543895)
chr1 (132-246)||(15813143-15813257)
chr1 (288-364)||(18736127-18736202)
chr1 (132-213)||(26648992-26649073)
chr1 (157-210)||(24054001-24054053)
chr1 (132-184)||(32383048-32383101)
chr1 (153-235)||(9401526-9401605)
chr1 (155-235)||(18830501-18830581)
chr1 (157-211)||(23179819-23179874)
chr1 (131-205)||(25958104-25958178)
chr1 (157-235)||(727489-727567)
chr1 (301-383)||(16179168-16179246)
chr1 (225-271)||(18100976-18101022)
chr1 (305-374)||(21973071-21973138)
chr1 (288-383)||(31235905-31235999)
chr1 (48-85)||(47401591-47401628)
chr1 (301-337)||(9787779-9787815)
chr1 (309-364)||(14781741-14781794)
chr1 (132-191)||(17121523-17121582)
chr1 (135-202)||(18825655-18825722)
chr1 (161-233)||(24306957-24307028)
chr1 (153-193)||(34480987-34481027)
chr1 (317-379)||(9401684-9401744)
chr1 (291-364)||(22623043-22623114)
chr1 (131-174)||(33712659-33712702)
chr1 (157-211)||(14781876-14781930)
chr1 (132-213)||(16359867-16359948)
chr1 (3-85)||(16823838-16823920)
chr1 (318-383)||(25961023-25961085)
chr1 (303-383)||(18100871-18100947)
chr1 (309-342)||(21987889-21987922)
chr1 (58-87)||(23773671-23773700)
chr1 (304-380)||(33190843-33190915)
chr1 (305-333)||(155183-155211)
chr1 (49-85)||(5256998-5257034)
chr1 (309-356)||(25403974-25404019)
[»] scaffold0155 (1 HSPs)
scaffold0155 (153-383)||(35851-36076)
[»] scaffold0062 (2 HSPs)
scaffold0062 (157-273)||(43188-43304)
scaffold0062 (288-332)||(43132-43176)
[»] scaffold0008 (3 HSPs)
scaffold0008 (132-273)||(54856-54999)
scaffold0008 (135-189)||(48235-48290)
scaffold0008 (156-235)||(234362-234441)
[»] scaffold0024 (1 HSPs)
scaffold0024 (153-384)||(39602-39828)
[»] scaffold0638 (2 HSPs)
scaffold0638 (138-236)||(821-919)
scaffold0638 (309-380)||(681-750)
[»] scaffold0838 (1 HSPs)
scaffold0838 (137-273)||(2371-2508)
[»] scaffold0832 (1 HSPs)
scaffold0832 (137-273)||(2402-2539)
[»] scaffold0056 (3 HSPs)
scaffold0056 (158-235)||(21299-21376)
scaffold0056 (289-364)||(25125-25198)
scaffold0056 (158-235)||(25009-25086)
[»] scaffold0016 (2 HSPs)
scaffold0016 (155-235)||(3551-3631)
scaffold0016 (131-207)||(12104-12181)
[»] scaffold0427 (1 HSPs)
scaffold0427 (171-273)||(2778-2881)
[»] scaffold0650 (1 HSPs)
scaffold0650 (132-213)||(6283-6365)
[»] scaffold0035 (2 HSPs)
scaffold0035 (134-235)||(69911-70013)
scaffold0035 (293-357)||(70066-70129)
[»] scaffold0102 (2 HSPs)
scaffold0102 (121-273)||(35522-35675)
scaffold0102 (303-364)||(35703-35761)
[»] scaffold0001 (2 HSPs)
scaffold0001 (126-202)||(69072-69148)
scaffold0001 (132-210)||(81483-81561)
[»] scaffold0136 (1 HSPs)
scaffold0136 (115-205)||(15494-15585)
[»] scaffold0043 (1 HSPs)
scaffold0043 (132-210)||(89878-89956)
[»] scaffold1869 (2 HSPs)
scaffold1869 (136-213)||(410-488)
scaffold1869 (298-364)||(264-328)
[»] scaffold0263 (1 HSPs)
scaffold0263 (292-364)||(15800-15870)
[»] scaffold0034 (2 HSPs)
scaffold0034 (157-235)||(76439-76518)
scaffold0034 (309-364)||(76575-76628)
[»] scaffold0957 (2 HSPs)
scaffold0957 (121-213)||(3138-3230)
scaffold0957 (293-383)||(3299-3386)
[»] scaffold0672 (1 HSPs)
scaffold0672 (153-206)||(1752-1805)
[»] scaffold0671 (1 HSPs)
scaffold0671 (317-364)||(609-654)
[»] scaffold0653 (1 HSPs)
scaffold0653 (132-233)||(4484-4586)
[»] scaffold0042 (1 HSPs)
scaffold0042 (138-257)||(29909-30027)
[»] scaffold0019 (2 HSPs)
scaffold0019 (161-207)||(11266-11312)
scaffold0019 (137-234)||(181706-181803)
[»] scaffold0048 (1 HSPs)
scaffold0048 (132-207)||(78590-78666)
[»] scaffold0002 (1 HSPs)
scaffold0002 (56-87)||(151222-151253)
[»] scaffold0054 (2 HSPs)
scaffold0054 (138-183)||(72074-72120)
scaffold0054 (288-383)||(72159-72253)
[»] scaffold0394 (1 HSPs)
scaffold0394 (131-179)||(13963-14011)
[»] scaffold0620 (1 HSPs)
scaffold0620 (138-173)||(7661-7697)
[»] scaffold0386 (1 HSPs)
scaffold0386 (309-364)||(6590-6643)
[»] scaffold0111 (1 HSPs)
scaffold0111 (309-364)||(3805-3858)


Alignment Details
Target: chr7 (Bit Score: 306; Significance: 1e-172; HSPs: 109)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 383
Target Start/End: Original strand, 4818702 - 4819084
Alignment:
Q  1 taaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtatagatataaaggaccaagttt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4818702 taaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaaggggttattttctttatatatagtatagatataaaggaccaagttt 4818801  T
Q  101 gattgaaaaaggttaacaactgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4818802 gattgaaaaaggttaacaactgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcacatccacagggattg 4818901  T
Q  201 tcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaagagttaagggttagaga-nnnnnnnnnnnnnnatctatttgaaa 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||               ||||| ||| ||    
T  4818902 tcgtttcgtccaagcacttcacgttacttatttttagttgacgatataaaataaaagagttaagggttagagatttttaattttttttatcta-ttgcaa 4819000  T
Q  300 tagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4819001 tagagcaagttacctatttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 4819084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 1 - 383
Target Start/End: Original strand, 4785702 - 4786083
Alignment:
Q  1 taaaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtatagatataaaggaccaagttt 100  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4785702 taaaaattgaaggtaatcttagaaagagaaaaagttggcacaaaaaatccaaaaggggttattttctttatatatagtatagatataaaggaccaagttt 4785801  T
Q  101 gattgaaaaaggttaacaactgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  4785802 gattgaaaaaggttaacaactgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcacatccacagggattg 4785901  T
Q  201 tcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaagagttaagggttagaga-nnnnnnnnnnnnnnatctatttgaaa 299  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||               ||||||||| ||    
T  4785902 tcgtttcgtccaagcacttcacgttacttatttttagttgacgatataaaataaaagagttaagggttagagatttttaattttttttatctatttgcaa 4786001  T
Q  300 tagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  4786002 tagagcaagttacctgtttttggttgcagaaaagtaagca--gcggttaggattcttcgaatccctcctatttatattgttgga 4786083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 7318269 - 7318411
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| || |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||| || ||  ||   |||||||    
T  7318269 ttaggcaagtgtaccatatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtctaaacagctcgcattactta 7318368  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| |||||||||||||||||||||||| |||||||||||||    
T  7318369 ttttaagttgacgatataaaataaaagagataagggttagaga 7318411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 132 - 269
Target Start/End: Complemental strand, 10587127 - 10586989
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || ||  ||||||||||||    
T  10587127 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatctacagggattgtcgtttcgtctaaacaactcatgttactta 10587028  T
Q  231 tttttagttgacgatataaaataaaagagttaagggtta 269  Q
    |||| |||| || |||||||||||||||  |||||||||    
T  10587027 ttttaagtttacaatataaaataaaagaaataagggtta 10586989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 138 - 383
Target Start/End: Original strand, 16365707 - 16365948
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt- 235  Q
    ||||||| ||||||||| ||||||||||||||| | |||||||||||| |||||||| |||||||||||| || ||| || |||  |||||||||||||     
T  16365707 aagtgtaccaaatcgtttaccaagtaataaagtaaaaagtagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgttacttattttta 16365806  T
Q  236 agttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaaaagta 335  Q
    ||||||||||||  |||||||||||||||| |||||||              ||||||||| |   ||||||||||| |||||||||||||| |||||||    
T  16365807 agttgacgatat--aataaaagagttaaggtttagaga--ttttcaattttgatctatttgcatctgagcaagttacatgtttttggttgcaaaaaagta 16365902  T
Q  336 agcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||  ||||||||||||||||||||| | ||||||||||||||||||    
T  16365903 agca--gcggttaggattcttcgaatctcccctatttatattgttgga 16365948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 153 - 383
Target Start/End: Original strand, 3734614 - 3734838
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaat 252  Q
    |||||||||||||||||||||||||||||||| |||||||| | ||||| |||| |||||| || |||| |||||||||||| |||||||||||||||||    
T  3734614 ttaccaagtaataaagtgataagtagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttacttattttaagttgacgatataaaat 3734713  T
Q  253 aaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggat 352  Q
    ||||||||||||||||| |||              |||| |||| || ||||||||||||||||||| |||||||||||||||||||    ||||||||     
T  3734714 aaaagagttaagggttaaagattgcaaatttt---atctgtttgcaacagagcaagttacctgtttt-ggttgcagaaaagtaagca--atggttaggac 3734807  T
Q  353 tcttcgaatccctcctatttatattgttgga 383  Q
    |||| ||||| | ||||||||| | ||||||    
T  3734808 tctttgaatctcccctatttatttcgttgga 3734838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 138 - 342
Target Start/End: Complemental strand, 17153251 - 17153049
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    ||||||||||||| ||| ||||||||| |||||||||||||||||||| ||||||||  ||||||||||||||| || ||  ||  |||||||||||| |    
T  17153251 aagtgtatcaaatagtttaccaagtaagaaagtgataagtagagtatcgtatccacatagattgtcgtttcgtctaaacagctcgcgttacttattttaa 17153152  T
Q  237 gttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaa 336  Q
    |||||||| |||||||||||||| |||||||||||||              |||| |||| || | ||||||||||||||||||||||||||||||||||    
T  17153151 gttgacgacataaaataaaagagataagggttagaga---ttgttatttttatctgtttgcaacaaagcaagttacctgtttttggttgcagaaaagtaa 17153055  T
Q  337 gcagcg 342  Q
    ||||||    
T  17153054 gcagcg 17153049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 8054589 - 8054457
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||||| || ||| ||||||||||||    
T  8054589 ggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttattt 8054490  T
Q  234 tt---agttgacgatataaaataaaagagttaa 263  Q
    ||   |||||||||||||||| | |||||||||    
T  8054489 ttgtaagttgacgatataaaagataagagttaa 8054457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 121 - 382
Target Start/End: Complemental strand, 9731741 - 9731485
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| ||||||||||||| ||||||||| |  ||||| ||||||||||||||||||||| || ||||| ||||||||||||||||||| || ||    
T  9731741 tgatgtgcggattaggcaagtgtaccaaatcgtttaaaaagtagtaaagtgataagtagagtatcgtaaccacaaggattgtcgtttcgtccaaacaatt 9731642  T
Q  220 catgttacttatttttag-ttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgttt 318  Q
    |  ||||||||||||||| |||| |  ||||||||||||||||| |  |||||||              |||||| || || | ||||||||||||||||    
T  9731641 cgcgttacttatttttagtttgatg--ataaaataaaagagttacgaattagaga--tttgcaatttttatctatgtgtaacatagcaagttacctgttt 9731546  T
Q  319 ttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgg 382  Q
    ||||||||| |||||||||||  ||||||||| ||  |||||||||  ||||||||||||||||    
T  9731545 ttggttgcataaaagtaagca--gcggttagggttgatcgaatccc-actatttatattgttgg 9731485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 383
Target Start/End: Original strand, 15869591 - 15869837
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||| | |||| ||| ||  | |    ||||||||    
T  15869591 ttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccgcaaggatttttgttttgtctaaatagtctgcgttactta 15869690  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaa 330  Q
    |||| ||||||||||||||||||||| || |||||||| ||||              |||| |||| ||||||  |||||||||||||||||||||| ||    
T  15869691 ttttaagttgacgatataaaataaaatagataagggtttgaga----ttgcaattttatctgtttgcaatagaaaaagttacctgtttttggttgcataa 15869786  T
Q  331 aagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||| ||   ||||||||| |||| ||||||| ||| ||||||||||||||    
T  15869787 aagtaaaca--acggttaggactctttgaatcccccctgtttatattgttgga 15869837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 153 - 273
Target Start/End: Complemental strand, 8313476 - 8313353
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttca---tgttacttatttttagttgacgatataa 249  Q
    ||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| || ||  | |   ||||||||||||| |||||| | |||||    
T  8313476 ttaccaagtaataaagtgataagtagattatcgtatccacagggattgtcgtttcgtctaaacaactaattgtgttacttattttaagttgaaggtataa 8313377  T
Q  250 aataaaagagttaagggttagaga 273  Q
    ||||||||||||||||||||||||    
T  8313376 aataaaagagttaagggttagaga 8313353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 132 - 271
Target Start/End: Original strand, 9574403 - 9574543
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||||||||  |||||||| |||||| ||||||||||||||||||||||| |||| |||| |||||| |||||||| || |   ||  |||| |||    
T  9574403 ttaggcaagtgtactaaatcgtttaccaaggaataaagtgataagtagagtatcgtatctacagagattgttgtttcgtctaaacgactcgcgttattta 9574502  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttaga 271  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  9574503 ttttaagttgacgatataaaataaaagagttaagggttaga 9574543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 4986551 - 4986693
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| |||||||| ||||||||| |||||||||||||||| | ||||||||||  || ||||| |||||||||||||||| ||  |  ||  ||||||||    
T  4986551 ttagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttactta 4986650  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| ||||||||||| |||||||||| |||||||||||||||    
T  4986651 ttttaagttgacgataaaaaataaaagtgttaagggttagaga 4986693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 4990649 - 4990791
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| |||||||| ||||||||| |||||||||||||||| | ||||||||||  || ||||| |||||||||||||||| ||  |  ||  ||||||||    
T  4990649 ttagacaagtgtaccaaatcgtttaccaagtaataaagtgctgagtagagtatagtacccacatggattgtcgtttcgtctaaatagctcgcgttactta 4990748  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| ||||||||||| |||||||||| |||||||||||||||    
T  4990749 ttttaagttgacgataaaaaataaaagtgttaagggttagaga 4990791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 13759957 - 13759859
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||| ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||  |||||||||||||    
T  13759957 aagtgtaccaaatcgtttaccaattaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttattttt 13759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 18662441 - 18662539
Alignment:
Q  136 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||||||| |||||||| ||||||||||||||||||| || |||| |||||||||||    
T  18662441 gcaagtgtatcaaatcgtttaccaagcactaaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttattt 18662539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 121 - 233
Target Start/End: Original strand, 2563803 - 2563915
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| ||| ||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| || ||    
T  2563803 tgatgtgcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaatt 2563901  T
Q  220 catgttacttattt 233  Q
      ||||||||||||    
T  2563902 tgtgttacttattt 2563915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 9864429 - 9864350
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9864429 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacaaggattgtcgtttcgtc 9864350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 271
Target Start/End: Complemental strand, 23100055 - 23099916
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||  |||||||||||||||||| || |||  |  |||||    
T  23100055 ttaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcccgacactta 23099956  T
Q  231 tttttagttgacgatataaaataaaagagtt-aagggttaga 271  Q
    | |||||||||  |  ||||||||||||||| ||||||||||    
T  23099955 tgtttagttga--aagtaaaataaaagagttaaagggttaga 23099916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 3329772 - 3329679
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||| ||||| |||||||||||||  || |||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  3329772 tgatgtgcggattaggtaagtgtatcaaattatttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcatccaa 3329679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 383
Target Start/End: Original strand, 5108550 - 5108807
Alignment:
Q  120 ctgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcact 218  Q
    |||||||| || || |||||||||| |||||  || |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| || |    
T  5108550 ctgatgtgtggatttggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaat 5108648  T
Q  219 tcatgttacttattttt-agttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaag-ttacctgt 316  Q
    ||     |||||||||| ||||||||||||  |||||||||||  | |||||||||              |||| |||| || |||||||| |||| ||     
T  5108649 tc-gaacacttatttttaagttgacgatat--aataaaagagtatatggttagaga--gttacaatttttatctgtttgcaagagagcaagtttacttga 5108743  T
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||||    
T  5108744 ttttggttgcagaaaagtaagca--gcggttaggattctttgaatccc-cctatttatattgttgga 5108807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 10937597 - 10937674
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  10937597 tttaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtatagtatcgtatccacatggattgtcgtttc 10937674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 31492928 - 31493029
Alignment:
Q  134 aggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatt 232  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||||||| |||||||||||| |||||| || ||  | |||||||||    
T  31492928 aggcaagtgtatcaaatcgtttaccaggtaataaagtgataagtagagtatcgtatccacatggattgtcgttttgtccaaacaatttgttttacttatt 31493027  T
Q  233 tt 234  Q
    ||    
T  31493028 tt 31493029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 18369061 - 18368978
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    |||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||| || |||  ||||||||||||||    
T  18369061 ttaccaagtaataaagtgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattttta 18368978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 159 - 273
Target Start/End: Complemental strand, 3191134 - 3191020
Alignment:
Q  159 agtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaaga 258  Q
    ||||||||||||| ||||| ||||| ||||| | ||||||||||||||||||||| || ||| ||||| ||||||| |||||| ||||||||| |||||     
T  3191134 agtaataaagtgaaaagtaaagtattatatctatagggattgtcgtttcgtccaaacaattcgtgttatttattttaagttgaggatataaaacaaaagg 3191035  T
Q  259 gttaagggttagaga 273  Q
    |||  ||||||||||    
T  3191034 gttttgggttagaga 3191020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 139 - 381
Target Start/End: Complemental strand, 7492358 - 7492126
Alignment:
Q  139 agtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta-g 237  Q
    |||||| ||||| |||| | ||||||||| |||||||||||||||| |||||||| ||||||| ||||||| ||| || ||    |||||||||||||      
T  7492358 agtgtaccaaattgttatccagtaataaaatgataagtagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttatttttatt 7492259  T
Q  238 ttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaag 337  Q
    |||| |||||  ||||||||||||||||||||||||              | || |||| || |||||||||||||||||||||||||||||||||||||    
T  7492258 ttgatgatat--aataaaagagttaagggttagaga--tttgcaatttttaactgtttgcaacagagcaagttacctgtttttggttgcagaaaagtaag 7492163  T
Q  338 cagcgcggttaggattcttcgaatccctcctatttatattgttg 381  Q
     ||      ||||||||||| |||||| ||||||||||||||||    
T  7492162 aag------taggattcttccaatccc-cctatttatattgttg 7492126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 153 - 234
Target Start/End: Complemental strand, 8979087 - 8979006
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttt 234  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| || |||   |||||||||||    
T  8979087 ttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttatttt 8979006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 11803103 - 11803180
Alignment:
Q  158 aagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| || |||  |||||||||||||    
T  11803103 aagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttattttt 11803180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 239
Target Start/End: Original strand, 6042446 - 6042564
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| |||| |||||||||||||||||| |||| |||||||| || ||||||||||||| ||||||||| | |||||||||||| ||| || ||    
T  6042446 tgatgtgcggattagacaagtgtatcaaatcgtttaccatgtaataaaatg-taagtagagtatcgtatccacagaggttgtcgtttcgttcaaacaatt 6042544  T
Q  220 catgttacttatttttagtt 239  Q
       |||||||||||||||||    
T  6042545 tgcgttacttatttttagtt 6042564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 1584541 - 1584654
Alignment:
Q  132 ttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttat 231  Q
    ||||||||||||| |||    |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||| || ||  ||  |||||||||    
T  1584541 ttaggcaagtgtaccaatcatttaccaagtaataaagtgataagt-gagtatcgtatccacagggattgttgtttcgtctaaacaaatcgcgttacttat 1584639  T
Q  232 ttttagttgacgata 246  Q
    ||| |||||||||||    
T  1584640 tttaagttgacgata 1584654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 21230308 - 21230410
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||||| |||||||||||| ||||| ||||||| |||||||||||||||| ||| || ||||||| |||||||||| ||||| ||  |||||||||    
T  21230308 ttaggcaagtatatcaaatcgtttaccaaataataaaatgataagtagagtatcgtattcatagggattatcgtttcgtctaagcaatttgtgttactta 21230407  T
Q  231 ttt 233  Q
    |||    
T  21230408 ttt 21230410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 213
Target Start/End: Complemental strand, 2350861 - 2350768
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||| ||||||||||||| |||||| || ||||||||||||| || |||||||| |||| |||||||| |||||||||||| ||||||    
T  2350861 tgatgtgcggattaggcaagtgtaccaaatcatttaccaagtaataaactgctaagtagattatcgtatccacatggattgtcgttttgtccaa 2350768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 12181604 - 12181746
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgt-ccaagcacttcatgttactt 229  Q
    |||||||||| || ||||||||| |  |||||||||||||| |||||||||| | |||||||| | ||||||||||||| |||| || |||  |||||||    
T  12181604 ttaggcaagtataccaaatcgtttataaagtaataaagtgagaagtagagtaccgtatccacatgaattgtcgtttcgtcccaaacaattcgagttactt 12181703  T
Q  230 atttttagttgacgatataaaataaaagagtt-aagggttagaga 273  Q
    ||||| ||||||||  ||||| |||||||||| ||||||||||||    
T  12181704 attttaagttgacg--ataaattaaaagagttgaagggttagaga 12181746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 1848325 - 1848226
Alignment:
Q  135 ggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttt 234  Q
    |||||||||| ||||| || ||||||||||||||||||||||| |||||| ||||||| ||||||||| |||||||||| || ||   ||||||||||||    
T  1848325 ggcaagtgtaccaaattgt-accaagtaataaagtgataagtacagtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttatttt 1848227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 135 - 263
Target Start/End: Complemental strand, 8054158 - 8054029
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||||||| |||||||| | |||||||||   ||||| || |||   ||||||||||    
T  8054158 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataattagagtatcgtatccacatgaattgtcgtt---tccaaacaattctcattacttattt 8054062  T
Q  234 tt---agttgacgatataaaataaaagagttaa 263  Q
    ||   |||||||||||||||| | |||||||||    
T  8054061 ttgtaagttgacgatataaaagataagagttaa 8054029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 10648585 - 10648677
Alignment:
Q  143 tatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttt 234  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||| | || ||||||||||||| || || || ||| |||||||||||||    
T  10648585 tatcaaatcgtttaccaagtaataaagtgataaatagagtatcatatgcgcacggattgtcgtttcatctaaacaattcgtgttacttatttt 10648677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 251
Target Start/End: Original strand, 17077154 - 17077247
Alignment:
Q  161 taataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt---agttgacgatataaaa 251  Q
    ||||||||||||| |||||||||  ||||||  |||||||||||||||||||| || ||||||||||||||||||   |||||||| |||||||    
T  17077154 taataaagtgataggtagagtattgtatccatggggattgtcgtttcgtccaaacaattcatgttacttatttttgtaagttgacggtataaaa 17077247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 1587677 - 1587818
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||| |||| ||||||||| || ||||| ||||||||||| |||||||||||||| |||  ||| || ||||| ||||| || |||  ||||| ||    
T  1587677 ttaggcaaatgtaccaaatcgtttactaagtagtaaagtgataattagagtatcatatctacatagatagttgtttcatccaaacaattcgcgttaccta 1587776  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    ||||   ||||||||||||||||||||| || |||||||||||    
T  1587777 ttttgttttgacgatataaaataaaaga-tttagggttagaga 1587818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 209
Target Start/End: Complemental strand, 11221263 - 11221189
Alignment:
Q  136 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgt 209  Q
    ||||||||| ||||||||| || |||||||||| |||||||||||||||  ||||||||||||||||||||||||    
T  11221263 gcaagtgtaccaaatcgtttactaagtaataaattgataagtagagtattgtatccacagggattgtcgtttcgt 11221189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 18449237 - 18449314
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||||||||| ||| ||||||||||||||||| ||||| | |||| |||||| |||||||||||||||    
T  18449237 tttaggcaagtgtatcaaattgtttaccaagtaataaagtgagaagtataatatcgtatccatagggattgtcgtttc 18449314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 39273126 - 39273032
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||| || |||||||||| |||| ||||||||||||||||||||||||  ||||||||||| ||||||||| |  || ||||||||||||||    
T  39273126 atctatttgcaacagagcaagtttacctatttttggttgcagaaaagtaagca--gcggttaggatccttcgaatctcctctgtttatattgttgga 39273032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 9131065 - 9131134
Alignment:
Q  293 tttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| |||||||||||||| ||||||||||||||| ||||||||||   |||||||||||||||||||||||    
T  9131065 tttgcaatagagcaagttaactgtttttggttgcaaaaaagtaagc--tgcggttaggattcttcgaatccc 9131134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 234
Target Start/End: Complemental strand, 16297932 - 16297820
Alignment:
Q  123 atgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttca 221  Q
    |||||| | ||||||||||||| |||||  || |||||||||||| |||||||||||| |||| ||| |||| |||||||| |||||||||| || ||||    
T  16297932 atgtgcagattaggcaagtgtaccaaataatttaccaagtaataatgtgataagtagattatcgtattcacatggattgtcatttcgtccaaacaattca 16297833  T
Q  222 tgttacttatttt 234  Q
      |||||||||||    
T  16297832 cattacttatttt 16297820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 202
Target Start/End: Original strand, 5797507 - 5797578
Alignment:
Q  132 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtc 202  Q
    ||||||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||||||| | ||||||    
T  5797507 ttaggcaagtgtaacaaatcgcttaccaagtaataaagtaataagtagagtatcgtatccacatgaattgtc 5797578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 6013589 - 6013728
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| |||||| || | |||||| | ||||||||||||||||||| |||||||| ||||| || |||  ||||| || ||    |||||||    
T  6013589 ttaggcaagtgtaccaaatcatttatcaagtacttaagtgataagtagagtatcgtatccacaaggattctcattttatccaaacaattggctttactta 6013688  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttag 270  Q
    ||||   |||| |||||||||||||||||| |||||||||    
T  6013689 ttttagtttgatgatataaaataaaagagtaaagggttag 6013728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 13418533 - 13418653
Alignment:
Q  135 ggcaagtgtatcaaatcgtta-ccaagtaataaa-gtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatt 232  Q
    |||||||||| ||| |||||| |||||||||||| ||||||||||||||||| |||||| |||||||||| |||||||||| || ||   ||||||||||    
T  13418533 ggcaagtgtaccaa-tcgttaaccaagtaataaaagtgataagtagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttatt 13418631  T
Q  233 ttt---agttgacgatataaaa 251  Q
    |||   |||||||| |||||||    
T  13418632 tttttaagttgacggtataaaa 13418653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 18467474 - 18467549
Alignment:
Q  158 aagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||||||||||||| |||||  |||||||| |||||||||||||||| || || || |||||||||||||    
T  18467474 aagtaataaagtgataagtaaagtattgtatccacatggattgtcgtttcgtctaaacaatttatgttacttattt 18467549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 4449002 - 4449080
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||||||||||| |||||  |||||||||||| |||| ||| |||||| || ||| ||||||||||||||    
T  4449002 caagtaataaagtgataagtaaagtattgtatccacagggactgtccttttgtccaaacaattcttgttacttattttt 4449080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 5530017 - 5530119
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||| ||||| ||||| ||| ||||||||||||| ||||||||| || ||| ||||||||| |||| ||||||||||||| || ||  |||||||||    
T  5530017 ttaggcaggtgtaccaaattgtttaccaagtaataaaatgataagtaaagcatcgtatccacagagattttcgtttcgtccaaacaatttgtgttactta 5530116  T
Q  231 ttt 233  Q
    |||    
T  5530117 ttt 5530119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 10584589 - 10584487
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| |||||||| ||||||||| | ||||||||||||||||||| | |||||| |||||||| ||||||||||||| |  || || ||| |||||||||    
T  10584589 ttagacaagtgtaccaaatcgtttatcaagtaataaagtgataagcaaagtatcgtatccacatggattgtcgtttcatagaaacaattcgtgttactta 10584490  T
Q  231 ttt 233  Q
    |||    
T  10584489 ttt 10584487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 39273256 - 39273174
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||| ||||||||||||||||||||||||||| ||| || | |||||||||||||||||||  | ||  ||||||||||||||    
T  39273256 ttactaagtaataaagtgataagtagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttattttt 39273174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 1848177 - 1848085
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| ||||||| |||||||||| ||||||||| |||||||||||||||||||  ||||||| ||||||||||||| | ||||| ||||||||||||    
T  1848177 atctgtttgaaacagagcaagtttacctgtttt-ggttgcagaaaagtaagca--gcggttatgattcttcgaatctc-cctatatatattgttgga 1848085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 4579095 - 4579195
Alignment:
Q  133 taggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttat 231  Q
    |||||||||||  ||||||||| || ||||||||| ||||||||||||||||| |||||| || ||||||| ||| |||||| || ||| ||||||||||    
T  4579095 taggcaagtgttccaaatcgtttactaagtaataa-gtgataagtagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgttacttat 4579193  T
Q  232 tt 233  Q
    ||    
T  4579194 tt 4579195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 305 - 361
Target Start/End: Original strand, 7397308 - 7397362
Alignment:
Q  305 caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaat 361  Q
    ||||||| |||||||||||||||||||||||||||  ||||||||||||||||||||    
T  7397308 caagttatctgtttttggttgcagaaaagtaagca--gcggttaggattcttcgaat 7397362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 21102389 - 21102320
Alignment:
Q  138 aagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||  ||| ||||  ||||||||||||    
T  21102389 aagtgtattgaatcgttaccaagtaataaagtgataagtagagtattgtattcacaatgattgtcgtttc 21102320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 6042621 - 6042691
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||| ||||||||||||||||| ||||||  ||||||||||||||| ||||||  ||||||||||||||||||    
T  6042621 ttacctttttttggttgcagaaaaataagca--gcggttaggattctttgaatcc--cctatttatattgttgga 6042691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 249
Target Start/End: Original strand, 12329678 - 12329797
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||| |||| ||||||||| ||||||||| ||| |||||| ||||||||  |||||||| |||||||||||| | ||||  | | |  ||||||||    
T  12329678 ttaggcaaatgtaccaaatcgtttaccaagtaagaaattgataaatagagtatagtatccacaaggattgtcgttttgcccaaataatccgcgttactta 12329777  T
Q  231 ttttt-agttgacgatataa 249  Q
    ||||| ||||||||||||||    
T  12329778 tttttaagttgacgatataa 12329797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 14755233 - 14755154
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    |||| |||||||| ||||||||| | |||||| |||||||| ||||||||||||||||||||| | ||||| ||||||||    
T  14755233 ttagacaagtgtaccaaatcgtttatcaagtagtaaagtgagaagtagagtatcatatccacaagtattgttgtttcgtc 14755154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 20582405 - 20582479
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||| || |||||||||| ||||||||| |||||||||||||||||||  || ||||||||||||||||||||    
T  20582405 atctatttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagca--gcagttaggattcttcgaatccc 20582479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 21912581 - 21912507
Alignment:
Q  134 aggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||||||||||||| ||| | ||| |||||||||||||||| ||||||| |||| || ||||||||||||||    
T  21912581 aggcaagtgtatcaaattgtttatcaaataataaagtgataagttgagtatcgtatctacggggattgtcgtttc 21912507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 8978956 - 8978862
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| |||||| |||||| |||||||||||||||||||||| ||||||  || ||||||||||||  ||||||  || ||||||||||||||    
T  8978956 atctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagca--gcagttaggattctttaaatcccctctgtttatattgttgga 8978862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 9916561 - 9916638
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||||||| || |||||| || |||| |||||||||| |||||||||||||| |||||||| ||||||| |||||    
T  9916561 tttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttc 9916638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 9924473 - 9924550
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||||||| || |||||| || |||| |||||||||| |||||||||||||| |||||||| ||||||| |||||    
T  9924473 tttaggcaagtataccaaatcatttaccacgtaataaagtaataagtagagtatcgtatccacatggattgtagtttc 9924550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 17203047 - 17203123
Alignment:
Q  158 aagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||| |||||||||||||| ||| ||| |||||||||||||||||||| || | |  |||||||||||||    
T  17203047 aagtaataaagt-ataagtagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttattttt 17203123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 85
Target Start/End: Original strand, 19008671 - 19008744
Alignment:
Q  12 ggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtatagata 85  Q
    |||||| ||| ||||| |||||||  || ||||||| |||||||  ||||||||||||||||||||||||||||    
T  19008671 ggtaattttgaaaagataaaaagtcagcccaaaaaaaccaaaacatgttattttctttatatatagtatagata 19008744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 184
Target Start/End: Original strand, 33035468 - 33035521
Alignment:
Q  131 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatc 184  Q
    ||||||||||||||||||||||||  | ||||||||||||||| ||||||||||    
T  33035468 tttaggcaagtgtatcaaatcgtttaccagtaataaagtgataggtagagtatc 33035521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 18662595 - 18662663
Alignment:
Q  293 tttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| || ||||||||||||||||||| ||||||||||| |||||||  |||||||||| ||||||||||||    
T  18662595 tttgcaacagagcaagttacctgtttt-ggttgcagaaatgtaagca--gcggttaggactcttcgaatccc 18662663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 20582258 - 20582375
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||| ||| ||||||||| ||||| ||||||||||||||||   ||||| ||||||||||||| |||||||| ||||  || |||  |||||||| ||    
T  20582258 ggcaagggtaccaaatcgtttaccaattaataaagtgataagt---gtatcgtatccacagggatcgtcgtttcttccatacaattctcgttacttaatt 20582354  T
Q  234 tt---agttgacgatataaaa 251  Q
    ||   ||||||||||||||||    
T  20582355 ttataagttgacgatataaaa 20582375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 1872781 - 1872884
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||  ||||||||| || |||||||| | |||||||||||||||| ||||||||    |||||||||| | ||| || ||| |||||||||    
T  1872781 ttaggcaagtgtgacaaatcgttcactaagtaatacaatgataagtagagtatcgtatccacataagttgtcgtttcatacaaacaattcgtgttactta 1872880  T
Q  231 tttt 234  Q
    ||||    
T  1872881 tttt 1872884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 206
Target Start/End: Original strand, 7397192 - 7397266
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgttt 206  Q
    ||||| ||||||| |||| |||| |||||||||||||||| ||| ||||||||| |||||||| ||||||||||||    
T  7397192 ttaggaaagtgtaccaaaccgtttaccaagtaataaagtg-taactagagtatcgtatccacatggattgtcgttt 7397266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 9500440 - 9500519
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    |||||||||||||  ||||| || |||||||||||| ||||| | ||||||||| |||||||| ||||||| ||||||||    
T  9500440 ttaggcaagtgtacaaaatcatttaccaagtaataatgtgatcattagagtatcgtatccacaaggattgttgtttcgtc 9500519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 16059099 - 16059020
Alignment:
Q  157 caagtaataaagtga-taagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||| | ||||||||||||| |||||||| |||||||| |||||||||| || ||   |||||||||||||    
T  16059099 caagtaataaagttagtaagtagagtatcgtatccacatggattgtcctttcgtccaaacaattttagttacttattttt 16059020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 223 - 273
Target Start/End: Original strand, 1584320 - 1584370
Alignment:
Q  223 gttacttatttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    ||||||||||||   |||||||||||||||||||||||||| |||||||||    
T  1584320 gttacttattttgttttgacgatataaaataaaagagttaaaggttagaga 1584370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 205
Target Start/End: Complemental strand, 7748184 - 7748115
Alignment:
Q  135 ggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    |||||||||||||||||||||   || ||||||||||||||| ||||||| |||||||| ||||| |||||    
T  7748184 ggcaagtgtatcaaatcgttatttagaaataaagtgataagt-gagtatcgtatccacatggattatcgtt 7748115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 7782556 - 7782630
Alignment:
Q  131 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    ||||||| |||||| |||||||||||| |||||||||||||||| | || |||| |||| |||| || |||||||    
T  7782556 tttaggcgagtgtaccaaatcgttacccagtaataaagtgataaattgaatatcgtatctacagagactgtcgtt 7782630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 8054012 - 8053938
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||| |||| |||||||| ||||||||| |||||||||||||||||||  || |||||||||||| |||||||    
T  8054012 atctatttgcaatatagcaagtttacctgtttt-ggttgcagaaaagtaagca--gcagttaggattctttgaatccc 8053938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 9245177 - 9245279
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||| |||| | ||||||| ||||||||| ||| || |||| |||||||| |||||||| |||||||| ||||||  || || ||| |||||||||    
T  9245177 ttaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttactta 9245276  T
Q  231 ttt 233  Q
    |||    
T  9245277 ttt 9245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 22067302 - 22067248
Alignment:
Q  158 aagtaataaagtga-taagtagagtatcatatccacagggattgtcgtttcgtcc 211  Q
    |||||||||||| | |||||||||||||||||||| |||||||||| ||||||||    
T  22067302 aagtaataaagttagtaagtagagtatcatatccatagggattgtcctttcgtcc 22067248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 56 - 89
Target Start/End: Original strand, 4676395 - 4676428
Alignment:
Q  56 gggttattttctttatatatagtatagatataaa 89  Q
    ||||||||||||||||||||||||||||||||||    
T  4676395 gggttattttctttatatatagtatagatataaa 4676428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 8877441 - 8877486
Alignment:
Q  155 accaagtaataaagtgataagtagagtatcatatccacagggattg 200  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||    
T  8877441 accaagtaataaggtgataagtagagtatcgtatccacatggattg 8877486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 9130902 - 9130985
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc--atatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||||||||| ||| | |||||||||||||| |||||| |||||   ||||||||| ||||| |||||||||||||    
T  9130902 ttaggcaagtgtatcaaattgtttatcaagtaataaagtg-taagtatagtattgtatatccacatggattatcgtttcgtccaa 9130985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 12391180 - 12391257
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||| ||||| ||| | ||| ||||||||||||||| ||||| || ||| |||||| |||||||||||    
T  12391180 tttaggcaagtgtaccaaatagtttatcaaataataaagtgataagaagagtgtcgtattcacaggaattgtcgtttc 12391257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 342
Target Start/End: Complemental strand, 16297770 - 16297729
Alignment:
Q  301 agagcaagttacctgtttttggttgcagaaaagtaagcagcg 342  Q
    |||| ||||||||| |||||||||||||||||||||||||||    
T  16297770 agagtaagttacctatttttggttgcagaaaagtaagcagcg 16297729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 16306677 - 16306758
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggatt 199  Q
    |||||||  ||| |||| ||||||||| ||||| || | |||||||||||||||||||||||||||| |||| ||| |||||    
T  16306677 actgatggtcggattagacaagtgtataaaatcctttaacaagtaataaagtgataagtagagtatcgtatctacaaggatt 16306758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 23093305 - 23093381
Alignment:
Q  131 tttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||| ||||||| |||| ||||||||||||| ||||||||||||  |||| ||  |||||||||||||    
T  23093305 tttaggcaagtgtaccaaatcgtttactaagtaataaagtg-taagtagagtattgtatctacgtggattgtcgtttc 23093381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 16058961 - 16058908
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| ||||||||||||||| ||||||||||  || ||||||||||||||||||||    
T  16058961 ttacttgtttttggttgcagtaaagtaagca--gctgttaggattcttcgaatccc 16058908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Original strand, 18466031 - 18466103
Alignment:
Q  161 taataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||||||||||||||| | |||||| ||||||| |||||||  |||| || ||  ||||||||||||    
T  18466031 taataaagtgataagtagagtaacgtatccatagggattctcgtttcagccaaacaatttgtgttacttattt 18466103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 18495391 - 18495471
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||| |||||||||||||||||||| ||||   ||||||  ||||||||||||||||| || || ||  ||||||||||||    
T  18495391 ttactaagtaataaagtgataagtaaagtaatgtatccatggggattgtcgtttcgtctaaacaatttgtgttacttattt 18495471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 199
Target Start/End: Original strand, 18661590 - 18661654
Alignment:
Q  136 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggatt 199  Q
    ||||||||| ||||||||| |||||  ||||||||||||||||||||||  |||||||| |||||    
T  18661590 gcaagtgtaccaaatcgtttaccaaacaataaagtgataagtagagtattgtatccacaaggatt 18661654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 383
Target Start/End: Complemental strand, 3329537 - 3329499
Alignment:
Q  344 ggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  3329537 ggttaggattcttcgaatccc-cctatttatattgttgga 3329499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 9866644 - 9866582
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 193  Q
    |||| ||||||||| ||||| ||| ||||| |||||||||| ||||||||||||||||||||||    
T  9866644 tttacgcaagtgtaccaaattgtttaccaaataataaagtg-taagtagagtatcatatccaca 9866582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 19153294 - 19153407
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| |||||| || |||||||||||||||||||| | |||||||| |||| || || ||||||||| ||||||  |  ||  ||||||||    
T  19153294 ttaggcaagtgtaccaaatcttttaccaagtaataaagtgataaat-gagtatcacatccgcatgg-ttgtcgttttgtccaaataactcgcgttactta 19153391  T
Q  231 tttttagttgacgata 246  Q
    |||| || ||||||||    
T  19153392 ttttaaggtgacgata 19153407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 336
Target Start/End: Original strand, 19153462 - 19153493
Alignment:
Q  305 caagttacctgtttttggttgcagaaaagtaa 336  Q
    ||||||||||||||||||||||||||||||||    
T  19153462 caagttacctgtttttggttgcagaaaagtaa 19153493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 20752693 - 20752806
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| |||||| || |||||||||||||||||||| | |||||||| |||| || || ||||||||| ||||||  |  ||  ||||||||    
T  20752693 ttaggcaagtgtaccaaatcttttaccaagtaataaagtgataaat-gagtatcacatccgcatgg-ttgtcgttttgtccaaataactcgcgttactta 20752790  T
Q  231 tttttagttgacgata 246  Q
    |||| || ||||||||    
T  20752791 ttttaaggtgacgata 20752806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 336
Target Start/End: Original strand, 20752861 - 20752892
Alignment:
Q  305 caagttacctgtttttggttgcagaaaagtaa 336  Q
    ||||||||||||||||||||||||||||||||    
T  20752861 caagttacctgtttttggttgcagaaaagtaa 20752892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 193
Target Start/End: Complemental strand, 26134851 - 26134789
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 193  Q
    ||||| |||||||| ||||||||| ||||||||||||| || ||||||||||||| ||||||||    
T  26134851 tttagacaagtgtaccaaatcgtttaccaagtaataaaatg-taagtagagtatcgtatccaca 26134789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 354
Target Start/End: Complemental strand, 3329585 - 3329542
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattc 354  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||    
T  3329585 ttacttgtttttggttgcagaaaagtaagca--gcggttaggattc 3329542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 14196075 - 14195974
Alignment:
Q  132 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||| ||| ||| |||||||||| |||||| |||| | |||||||| | ||| | ||||||||||| || |||  ||||||||    
T  14196075 ttaggcaagtgtaccaaatcgtttatcaaataataaagtg-taagtaaagtaccgtatccacaagaattattgtttcgtccaaacaattcgcgttactta 14195977  T
Q  231 ttt 233  Q
    |||    
T  14195976 ttt 14195974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 346 - 383
Target Start/End: Complemental strand, 2350605 - 2350568
Alignment:
Q  346 ttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  2350605 ttaggattcttcgaatcccccatatttatattgttgga 2350568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 2563967 - 2564060
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||| ||||| ||| | ||||||||||||||| ||||  |||||||| ||||||||||| ||| |||||||| |||||    
T  2563967 atctgtttgcaacagagcaagtttacctgctttagtttgcagaaaagtaagtagcg--gttaggatccttcgaatccc-cctgtttatattattgga 2564060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 18368913 - 18368836
Alignment:
Q  303 agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||| ||||||||| ||||||||||| |   |||||||||||| | ||||||| ||| | ||||||||||||    
T  18368913 agcaagttacctgcttttggttgtagaaaagtaagaa--acggttaggattccttgaatccc-cctgtctatattgttgga 18368836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 21885255 - 21885157
Alignment:
Q  132 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||| | |||||||||||    |||||||||| | |||||||| |||  |||||||||||||  |||| || |||| ||||||||    
T  21885255 ttaggcaagtgtaccaaatgggttaccaagtaa----gtgataagtaaaatatcatattcacgtggattgtcgtttcaaccaaacaattcacgttactta 21885160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 22339381 - 22339332
Alignment:
Q  164 taaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||||||| ||||||  |||| || |||||||||||||||||||    
T  22339381 taaagtgataagtaaagtatcgcatccgcaaggattgtcgtttcgtccaa 22339332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 6005878 - 6005934
Alignment:
Q  177 agagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||  |||||||| |||||||||||| |||||| || |||| |||||||||||    
T  6005878 agagtattgtatccacatggattgtcgtttggtccaaacaattcacgttacttattt 6005934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 9261222 - 9261278
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgt 209  Q
    ||||||||||| ||| ||||||| |||||||| |||||| | |||||||| ||||||    
T  9261222 ttaccaagtaaaaaaatgataagcagagtatcgtatccatatggattgtcatttcgt 9261278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 9574557 - 9574648
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| |||||||||||| |||||  |||| ||| |||||||||| ||  || |||||||||||| ||||||| ||||||||| ||||||||    
T  9574557 atctgtttgcaatagagcaagtaacctg-gtttgtttgaagaaaagtaaaca--gcagttaggattctttgaatccc-cctatttattttgttgga 9574648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 13289347 - 13289294
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||||||||||||||||| |||  |  |||||||| ||||||||||||||    
T  13289347 ttacctgtttttggttgcagaaaattaataa--gcggttagaattcttcgaatccc 13289294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 189
Target Start/End: Original strand, 21227197 - 21227233
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatc 189  Q
    |||| ||||||||||||||||||||||||||| ||||    
T  21227197 ttacaaagtaataaagtgataagtagagtatcgtatc 21227233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 86
Target Start/End: Complemental strand, 27509408 - 27509380
Alignment:
Q  58 gttattttctttatatatagtatagatat 86  Q
    |||||||||||||||||||||||||||||    
T  27509408 gttattttctttatatatagtatagatat 27509380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 6e-50; HSPs: 81)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 121 - 381
Target Start/End: Complemental strand, 16245843 - 16245589
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| |||| |||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||| || ||    
T  16245843 tgatgtgcggattagacaagtgtaccaactcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgtccaaacaatt 16245744  T
Q  220 catgttacttatttttagttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttt 319  Q
    |  ||||||||||||   |||||   ||||||||||||||||||||||||||||              ||||||||| || |||||||||||||||||||    
T  16245743 ctcgttacttattttagtttgac--aataaaataaaagagttaagggttagaga--tttgcaatttttatctatttgcaacagagcaagttacctgtttt 16245648  T
Q  320 tggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttg 381  Q
    ||||||||||||||||||||  |||||||| ||||| |||||||| ||||||||||||||||    
T  16245647 tggttgcagaaaagtaagca--gcggttagaattctccgaatccc-cctatttatattgttg 16245589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 119 - 383
Target Start/End: Complemental strand, 21303470 - 21303212
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcac 217  Q
    |||| ||||||| ||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| || |||||  |||||| ||||| ||||| ||     
T  21303470 actggtgtgcggattatgcaagtgtatcaaatcgtttaccaaataataaaatgataagtagagtatcgtagccacaaagattgttgtttcatccaaacaa 21303371  T
Q  218 ttcatgttacttatttttagttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtt 317  Q
    ||   |||||||||||| ||||||| ||||||||||||||||| ||||||||||||              |||| |||| || |||||||||||| || |    
T  21303370 tttccgttacttattttaagttgactatataaaataaaagagtaaagggttagaga---ttgcaatttttatctgtttgcaacagagcaagttacttg-t 21303275  T
Q  318 tttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||||||||  |||||||||||| || ||||||| ||||||||| ||||||||    
T  21303274 tttggttgcagaaaagtaagca--gcggttaggattatttgaatcccccctatttat-ttgttgga 21303212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 12805993 - 12805851
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| || ||   ||||||||    
T  12805993 ttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgttactta 12805894  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| ||| |||| |||||||||||||| | ||||||||||||    
T  12805893 ttttaagtcgacgttataaaataaaagattaaagggttagaga 12805851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 2167730 - 2167579
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttc 220  Q
    |||||||| | |||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||   | ||||||||||||||| || |||    
T  2167730 tgatgtgcagattagacaagtgtaccaaatcgttaccaagtaataaagtgataagtagagtatcgtatccacataaaatgtcgtttcgtccaaacaattc 2167631  T
Q  221 atgttacttatttttag-ttgacgatataaaataaaagagttaagggttagaga 273  Q
    |  |||||||||||||| |||||  |||||||||||||||| || |||||||||    
T  2167630 acattacttatttttagtttgac--tataaaataaaagagtaaatggttagaga 2167579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 121 - 235
Target Start/End: Original strand, 21301903 - 21302018
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||| || ||    
T  21301903 tgatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcatttcgtccaaacaatt 21302002  T
Q  220 catgttacttattttt 235  Q
    |  |||||||||||||    
T  21302003 cgagttacttattttt 21302018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 21325336 - 21325479
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||| ||| ||||||||||||| ||||||||| |||||| ||||||||   ||||||||||||||||| || ||  |||||||||    
T  21325336 ttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtatagtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttactta 21325435  T
Q  231 tttttagttgacgatataaaataaaagagtt-aagggttagaga 273  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||    
T  21325436 ttttaagttaacgatataaaataaaagagttgaagggttagaga 21325479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 138 - 235
Target Start/End: Complemental strand, 17438527 - 17438430
Alignment:
Q  138 aagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||| || |||| |||||||||||||    
T  17438527 aagtgtaccaaatcgttaccaagttataaaatgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttattttt 17438430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 153 - 273
Target Start/End: Original strand, 8319057 - 8319177
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaat 252  Q
    |||||||||||| |||||||||||||| |||  |||||||||||||| ||||||||| ||| || ||||||||||||||||| |||||| ||||||||||    
T  8319057 ttaccaagtaatgaagtgataagtagaatatagtatccacagggattatcgtttcgtacaaacaattcatgttacttattttaagttgatgatataaaat 8319156  T
Q  253 aaaagagttaagggttagaga 273  Q
    | ||||| |||| ||||||||    
T  8319157 acaagagataagagttagaga 8319177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 3116521 - 3116407
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||| || |||| ||||||||    
T  3116521 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagt-gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttactta 3116423  T
Q  231 tttttagttgacgata 246  Q
    |||| |||||||||||    
T  3116422 ttttaagttgacgata 3116407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 383
Target Start/End: Original strand, 41508350 - 41508608
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcac 217  Q
    |||||||||||| ||||||||||||| ||||||||| | ||||||||||||||||| ||||| |||| ||||  | ||||||||||||| |||||| ||     
T  41508350 actgatgtgcggattaggcaagtgtaccaaatcgtttatcaagtaataaagtgataggtagaatatcgtatctgcggggattgtcgtttagtccaaacaa 41508449  T
Q  218 ttcatgttacttatttttagtt-gacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgt 316  Q
    ||    ||||||||||||| || |||||||  |||||||||||||||||||||||||              |||| |||| || | |||||||||| |||    
T  41508450 tttgcattacttatttttaatttgacgata--aaataaaagagttaagggttagagatttgcaatttgt--atctgtttgcaacaaagcaagttacatgt 41508545  T
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||| |||||||||||||||| ||  ||||||| ||||||| ||||||| ||| ||||||||||||||    
T  41508546 ttt-ggttgcagaaaagtaacca--gcggttaagattctttgaatccc-cctctttatattgttgga 41508608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 6289899 - 6289977
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgt 209  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||    
T  6289899 ttaggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattatcatttcgt 6289977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 12411149 - 12411251
Alignment:
Q  134 aggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatt 232  Q
    ||||||||||| ||||||  |||||||||||||||||||| ||||||||||| |||||||| ||||||||||||||| ||| || || | ||||||||||    
T  12411149 aggcaagtgtaccaaatcacttaccaagtaataaagtgattagtagagtatcgtatccacaaggattgtcgtttcgtacaaacaatttaggttacttatt 12411248  T
Q  233 ttt 235  Q
    |||    
T  12411249 ttt 12411251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 821595 - 821515
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||  || || ||||||||||||||||    
T  821595 ttaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgtttcgtgtaaacaattcatgttacttattt 821515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 336
Target Start/End: Original strand, 5508332 - 5508532
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtta-ccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| |||||| ||  ||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| ||  ||  ||||||||    
T  5508332 ttaggcaagtgtaccaaatcatttgccaagtaataaagtgataagt-gagtataatatccacatggattgtcgtttcgtccaaacatctcgcgttactta 5508430  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaa 330  Q
    |||| || |||||  ||||||| |||||| ||||||||| |||              |||| |||| ||||||||||||||| ||||||| |||||||||    
T  5508431 ttttaaggtgacg--ataaaat-aaagagataagggtta-agagatttgaaatttttatctgtttgcaatagagcaagttacatgttttttgttgcagaa 5508526  T
Q  331 aagtaa 336  Q
    ||||||    
T  5508527 aagtaa 5508532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 10744898 - 10744977
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||| | |||| ||||||||||||||||||    
T  10744898 ttaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtttccatagggattgtcgtttcgtc 10744977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 10917914 - 10917993
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||||| ||||||| ||||||||    
T  10917914 ttaggcaagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacatggattgttgtttcgtc 10917993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 13908328 - 13908253
Alignment:
Q  132 ttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||| ||||||| |||||| || |||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  13908328 ttaggaaagtgtaccaaatcttttccaagtaataaagtgataagtagagtatcatatccatagggattatcgtttc 13908253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 22349410 - 22349509
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||||| ||||||||   ||||||||||||||||| || ||||  ||||||||||||    
T  22349410 caagtgtaccaaatcgtttaccaaataataaagtgataagtagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttattttt 22349509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 12759382 - 12759459
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||| |||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||||| | |||||||||||    
T  12759382 tttagacaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcgtatccacaagtattgtcgtttc 12759459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 131 - 188
Target Start/End: Complemental strand, 51119346 - 51119289
Alignment:
Q  131 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatat 188  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  51119346 tttatgcaagtgtatcaaatcgttaccaaataataaagtgataagtaaagtatcatat 51119289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 19171915 - 19171855
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||||||||||||| |||| ||||||| |||| |||||||||||||||||||    
T  19171915 ttaccaagtaataaagtgataagcagaggatcatattcacaaggattgtcgtttcgtccaa 19171855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 153 - 232
Target Start/End: Original strand, 4650249 - 4650328
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatt 232  Q
    |||||||||||||||||||| |||| |||||| ||||||||||||||||| ||||| |||| || |||  ||||||||||    
T  4650249 ttaccaagtaataaagtgatgagtaaagtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt 4650328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 236
Target Start/End: Original strand, 932742 - 932843
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||||||| ||||| || |||||||||| |||||| ||||||||| ||||||||| ||||||| ||||||||||  | ||||  ||||||||||    
T  932742 ggcaagtgtatcaa-tcgtttactaagtaataaattgataaatagagtatcgtatccacagagattgtcctttcgtccaaaaaattcacattacttattt 932840  T
Q  234 tta 236  Q
    |||    
T  932841 tta 932843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 207
Target Start/End: Complemental strand, 8557210 - 8557156
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||| |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  8557210 ttaccgagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttc 8557156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 8889229 - 8889151
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||| | | || |||  |||||||||||||    
T  8889229 caagtaataaagtgataagtagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttattttt 8889151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 21825971 - 21825870
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||| ||||||| ||||||||| ||| |||||||||||| ||||||||||||| |||||||| ||||| | ||||||||||| || |||  ||||||||    
T  21825971 ttaggtaagtgtaccaaatcgtttaccgagtaataaagtg-taagtagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttactta 21825873  T
Q  231 ttt 233  Q
    |||    
T  21825872 ttt 21825870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 8770019 - 8770119
Alignment:
Q  135 ggcaagtgtatcaaatcgtta-ccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| ||| |||||| |||||||||||||||||||||| ||||||||||||||| |||||||| ||| |||  | || ||| ||||||||| ||    
T  8770019 ggcaagtgtaccaa-tcgttaaccaagtaataaagtgataagtaaagtatcatatccacatggattgtccttttgtctgaacaattcttgttacttagtt 8770117  T
Q  234 tt 235  Q
    ||    
T  8770118 tt 8770119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 28728939 - 28729016
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||||||||| ||||||  || | |||||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  28728939 tttaggcaagtgtgtcaaataatttatcaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttc 28729016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 8170042 - 8170095
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  8170042 ttacctgtttttggttgcagaaaagtatgca--gcggttaggattcttcgaatccc 8170095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 12754851 - 12754798
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  12754851 ttacctggttttggttgcagaaaagtaagca--gcggttaggattcttcgaatccc 12754798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 17438351 - 17438290
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgtt 380  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||||  ||||||||||||||    
T  17438351 ttttggttgcagaaaagtaagcaacg--gttaggattcttcgaatcccctctatttatattgtt 17438290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 19908307 - 19908407
Alignment:
Q  136 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttt 234  Q
    ||||||||| ||||||||| ||||| ||||||| ||||||||| |||||| |||||||| || | |||||||||||||| || |||| || || ||||||    
T  19908307 gcaagtgtaccaaatcgtttaccaaataataaaatgataagtatagtatcgtatccacaagggtcgtcgtttcgtccaaacaattcacgtaacctatttt 19908406  T
Q  235 t 235  Q
    |    
T  19908407 t 19908407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 19925701 - 19925621
Alignment:
Q  156 ccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    ||||||||||| |||||| |||||||||| |||||||| |||||||| ||||||||||  | |||  ||||||||||||||    
T  19925701 ccaagtaataaggtgatatgtagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttattttta 19925621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 7495043 - 7494971
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||| |||||||||||||  | | |||||||| ||||||||||  |||||||||||||||||    
T  7495043 ttacctgtttttggttgtagaaaagtaagca--gggattaggattattcgaatcccctctatttatattgttgga 7494971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 194
Target Start/End: Complemental strand, 11518060 - 11518001
Alignment:
Q  136 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacag 194  Q
    ||||||||| ||||||||| | ||||||||||||||||||||||| ||||||||||||||    
T  11518060 gcaagtgtaccaaatcgttcatcaagtaataaagtgataagtagaatatcatatccacag 11518001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 16229882 - 16229831
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatc 362  Q
    ||||||||||||||||||| |||||||||||  |||||||||||||||||||||    
T  16229882 ttacctgtttttggttgcaaaaaagtaagca--gcggttaggattcttcgaatc 16229831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 271
Target Start/End: Original strand, 20429728 - 20429845
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta--gttgacgatataaa 250  Q
    ||||||||||||||| |||||||||||||||| |||| | | |||||||| |||| ||||  || |||  ||||||||||||||   ||||||||||  |    
T  20429728 ttaccaagtaataaaatgataagtagagtatcgtatctataaggattgtcatttcatccacacaattcgcgttacttatttttaagtttgacgatat--a 20429825  T
Q  251 ataaaagagttaagggttaga 271  Q
    ||||||||| |||||||||||    
T  20429826 ataaaagag-taagggttaga 20429845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 21083306 - 21083368
Alignment:
Q  131 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 193  Q
    |||||||||||||| |||||||||||||| ||||||| ||| ||||| |||||| ||||||||    
T  21083306 tttaggcaagtgtaacaaatcgttaccaaataataaaatgacaagtaaagtatcgtatccaca 21083368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 358
Target Start/End: Complemental strand, 27413825 - 27413778
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcg 358  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||    
T  27413825 ttacctgtttttggttgcagaaaagtaagca--gcggttaggattcttcg 27413778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 19908478 - 19908531
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||| ||||||||||||||||||||||||  || ||||||||||||||||||||    
T  19908478 ttacctatttttggttgcagaaaagtaagca--gcagttaggattcttcgaatccc 19908531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 19909901 - 19909848
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||||| ||||||||||||||||||  ||||||||||||||| |||||||    
T  19909901 ttacctgttttttgttgcagaaaagtaagca--gcggttaggattctttgaatccc 19909848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 305 - 383
Target Start/End: Complemental strand, 2167549 - 2167475
Alignment:
Q  305 caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||| |||||  |||||||||| || |  |||||||||||||||||||| ||||||||||||||||||    
T  2167549 caagttacctgtttt-ggttgtggaaaagtaagaagtg--gttaggattcttcgaatccc-cctatttatattgttgga 2167475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 123 - 193
Target Start/End: Complemental strand, 18458536 - 18458465
Alignment:
Q  123 atgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 193  Q
    ||||| || |||| |||||||| ||||| ||| | |||||||||||||||||||||||||||| ||||||||    
T  18458536 atgtgtggattagacaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccaca 18458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 18736774 - 18736696
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    |||| |||||||| ||||||||| ||||||||||||||| ||||||||| |||| |||| |||||  |||||||||||||    
T  18736774 ttagacaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagaatatcgtatctacaggtgttgtcgtttcgtc 18736696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 21019675 - 21019625
Alignment:
Q  154 taccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    |||||||||||||||| |||||||||||||| |||||||| |||||||||||    
T  21019675 taccaagtaataaagt-ataagtagagtatcttatccacaaggattgtcgtt 21019625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 7478444 - 7478319
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| | ||||||||||| ||||  ||| ||||| ||||||||||||     || |||| ||||||||  ||||||||||| |||||| || ||    
T  7478444 tgatgtgcggatcaggcaagtgtaccaaactgtttaccaaataataaagtgat-----gactatcgtatccacattgattgtcgtttggtccaaacaatt 7478350  T
Q  220 catgttacttat-ttttagttgacgatataa 249  Q
    || ||||||||| |||||||||| |||||||    
T  7478349 cacgttacttattttttagttgatgatataa 7478319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 16230019 - 16229965
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtcc 211  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||| ||| ||||    
T  16230019 caagtaataaagtagtaagtagagtatcgtatccacagggattgtccttttgtcc 16229965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 31286117 - 31286037
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||| |||||||| |||||| || |||||||||||||||| ||| |||| |||| |||||||||||||||| |||||||||||    
T  31286117 ttagacaagtgtaccaaatcatttaccaagtaataaagtg-taactagaatatcgtatccacagggattgt-gtttcgtccaa 31286037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 271
Target Start/End: Complemental strand, 2723851 - 2723798
Alignment:
Q  218 ttcatgttacttatttttagttgacgatataaaataaaagagttaagggttaga 271  Q
    |||||||||||||||||   |||| ||||||||||||| |||||||||||||||    
T  2723851 ttcatgttacttattttagtttgatgatataaaataaatgagttaagggttaga 2723798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 8770170 - 8770231
Alignment:
Q  301 agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||| ||||||||| |||||||||||||||||||  || ||||||||||||||||||||    
T  8770170 agagcaagtttacctgtttt-ggttgcagaaaagtaagca--gcagttaggattcttcgaatccc 8770231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 4650389 - 4650449
Alignment:
Q  302 gagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||||||||||    
T  4650389 gagcaagtttacctgtttt-ggttgcagaaaagtaagca--acggttaggattcttcgaatccc 4650449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 8765137 - 8765217
Alignment:
Q  155 accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||| ||||||||||||||||| |||||| |||||||| |||||||| ||| |||  | || ||| ||||||||| ||||    
T  8765137 accaattaataaagtgataagtaaagtatcgtatccacatggattgtccttttgtctgaacaattcttgttacttagtttt 8765217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 343 - 383
Target Start/End: Original strand, 12411350 - 12411390
Alignment:
Q  343 cggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  12411350 cggttaggattcttcgaatcccccctgtttatattgttgga 12411390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 235
Target Start/End: Complemental strand, 27413957 - 27413881
Alignment:
Q  160 gtaataaagtga-taagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||| | |||||||||||||||||||| |||||||||| ||||| |  | || ||| ||||||||||||||    
T  27413957 gtaataaagttagtaagtagagtatcatatccaaagggattgtcctttcgactgaacaattcttgttacttattttt 27413881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 27543011 - 27542956
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 193  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||||| ||||||||    
T  27543011 aagtgtatcaaatcgtttaccaagaaataaagt-ataagtagagtatcgtatccaca 27542956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 7478283 - 7478211
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||| |||| ||||| |||||||| |   |||||||| ||||||||||  |||||||||||||||||    
T  7478283 ttacctgtttttagttgtagaaatgtaagcaggga--ttaggattattcgaatcccctctatttatattgttgga 7478211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 305 - 383
Target Start/End: Original strand, 8143781 - 8143854
Alignment:
Q  305 caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||| ||||||||||| ||||||| ||  |||||||||||| ||||||| ||||||||| ||||||||    
T  8143781 caagttacctgtttt-ggttgcagaaa-gtaagcaacg--gttaggattcttggaatcccccctatttat-ttgttgga 8143854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 213
Target Start/End: Original strand, 8445846 - 8445900
Alignment:
Q  158 aagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||| ||||||||||||  | |||||| |||||||||||||||||||    
T  8445846 aagtaataaagtg-taagtagagtattgtgtccacatggattgtcgtttcgtccaa 8445900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 10745051 - 10745101
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagca 339  Q
    ||||||||| || ||||||||||||||| ||||||||||||||| |||||||    
T  10745051 atctatttgcaacagagcaagttacctg-ttttggttgcagaaatgtaagca 10745101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 87
Target Start/End: Original strand, 12565816 - 12565847
Alignment:
Q  56 gggttattttctttatatatagtatagatata 87  Q
    ||||||||||||||||||||||||||||||||    
T  12565816 gggttattttctttatatatagtatagatata 12565847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 87
Target Start/End: Original strand, 13155735 - 13155766
Alignment:
Q  56 gggttattttctttatatatagtatagatata 87  Q
    ||||||||||||||||||||||||||||||||    
T  13155735 gggttattttctttatatatagtatagatata 13155766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 87
Target Start/End: Original strand, 13260219 - 13260250
Alignment:
Q  56 gggttattttctttatatatagtatagatata 87  Q
    ||||||||||||||||||||||||||||||||    
T  13260219 gggttattttctttatatatagtatagatata 13260250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 20339867 - 20339765
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactt 229  Q
    |||||| |||| |||||||||||| ||||||||||||| || ||||||||||||| ||| |||| |  |||| |||||  ||| ||| || |||||||||    
T  20339867 tttagggaagtatatcaaatcgtttaccaagtaataaaatg-taagtagagtatcgtattcacatgtgttgttgtttcaaccaggcaattgatgttactt 20339769  T
Q  230 attt 233  Q
    ||||    
T  20339768 attt 20339765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 52517880 - 52517834
Alignment:
Q  146 caaatcgttaccaagtaataaagtgataagtagagtatcatatccaca 193  Q
    |||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  52517880 caaatcgttatcaagtaataaagtgataagt-gagtatcgtatccaca 52517834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 10923165 - 10923219
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||||||||||| || |||||| |||||||  ||||||| |||||    
T  10923165 ttaccaagtaataaagtgataattacagtatcgtatccacgaggattgttgtttc 10923219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 365
Target Start/End: Complemental strand, 12805839 - 12805765
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccct 365  Q
    |||| |||| || |||| || ||||||| ||| |||||||||||||||||||  | ||||||||||||||||||||||    
T  12805839 atctgtttgcaacagagaaaattacctgattt-ggttgcagaaaagtaagca--ggggttaggattcttcgaatccct 12805765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 374
Target Start/End: Complemental strand, 19171791 - 19171732
Alignment:
Q  313 ctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat 374  Q
    |||||||| |||||||||||||| |||| |  |||||||||||||||||| | |||||||||    
T  19171791 ctgttttttgttgcagaaaagtatgcagtg--gttaggattcttcgaatcacccctatttat 19171732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 357
Target Start/End: Complemental strand, 19925559 - 19925504
Alignment:
Q  301 agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttc 357  Q
    |||||||||| ||||||||| | |||||||||||||||||  ||||||||||||||||    
T  19925559 agagcaagtttacctgttttggtttgcagaaaagtaagca--gcggttaggattcttc 19925504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 21302068 - 21302143
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| |||| || |||||||||| |||| |||||| |||||||||| ||| |||||  ||||||||||||||||||||    
T  21302068 atctgtttgcaacagagcaagtttacctttttttgattgcagaaaaataaacagcg--gttaggattcttcgaatccc 21302143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 361
Target Start/End: Original strand, 932921 - 932963
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaat 361  Q
    |||||||||||||||||||||||  |||||||| |||||||||||    
T  932921 ttttggttgcagaaaagtaagca--gcggttagtattcttcgaat 932963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 7495171 - 7495079
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttat-ttttagttgacgatataa 249  Q
    ||||||| ||||||||||||     |||||||  ||||||| |||| |||||||||||||| || || | ||||||||| |||||||||| |||||||    
T  7495171 ttaccaaataataaagtgat-----gagtatcgaatccacatggatcgtcgtttcgtccaaacaattaacgttacttattttttagttgatgatataa 7495079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 7791566 - 7791595
Alignment:
Q  58 gttattttctttatatatagtatagatata 87  Q
    ||||||||||||||||||||||||||||||    
T  7791566 gttattttctttatatatagtatagatata 7791595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 364
Target Start/End: Original strand, 8765268 - 8765329
Alignment:
Q  301 agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||| ||||||||| |||||||||||||||||||  || |||| |||||||||||||||    
T  8765268 agagcaagtttacctgtttt-ggttgcagaaaagtaagca--gcagttaagattcttcgaatccc 8765329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 17155855 - 17155928
Alignment:
Q  198 ttgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaagagttaagggttaga 271  Q
    |||| ||||||| ||| || | |||||||||||||||   || ||||||||||| |||||||||| ||||||||    
T  17155855 ttgttgtttcgttcaaacaatccatgttacttattttagtttaacgatataaaaaaaaagagttacgggttaga 17155928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 19706899 - 19706831
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggatt 199  Q
    |||| ||||||||||||||| ||| ||||| |||||||| | |||||| ||||||||||||||| |||||    
T  19706899 tttaagcaagtgtatcaaattgtttaccaaataataaagag-taagtaaagtatcatatccacatggatt 19706831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 21325491 - 21325564
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||| || ||||||||||||||  ||| ||||||||||||||||| |  ||||||| ||||||||| |||||    
T  21325491 atctatttgcaacagagcaagttacctaattt-ggttgcagaaaagtaagta--gcggttatgattcttcgcatccc 21325564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 27397955 - 27397886
Alignment:
Q  12 ggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtata 81  Q
    |||||| ||||||||||||| | |   | ||||||| |||||||  ||||||||||||||||||||||||    
T  27397955 ggtaatattggaaagagaaataatcaacccaaaaaagccaaaacatgttattttctttatatatagtata 27397886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 80
Target Start/End: Original strand, 29626072 - 29626145
Alignment:
Q  7 ttgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtat 80  Q
    |||||| |||| |||||||||||||||||  || ||||| |  |||| |  |||||||||||||||||||||||    
T  29626072 ttgaagataattttggaaagagaaaaagtcagcccaaaagagtcaaagcatgttattttctttatatatagtat 29626145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Complemental strand, 3116369 - 3116321
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaa 336  Q
    |||| |||| || |||||||| |||||| ||||||||||||||||||||    
T  3116369 atctgtttgcaacagagcaagatacctggttttggttgcagaaaagtaa 3116321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 7147984 - 7148059
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||| |||| ||||||||| |||||||| ||||   |||||||||||||| | |||||| |||||||||||||    
T  7147984 ttaggcaaatgtaccaaatcgtttaccaagtactaaaaa-ataagtagagtatcgtctccacatggattgtcgtttc 7148059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 356
Target Start/End: Complemental strand, 18736604 - 18736556
Alignment:
Q  305 caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattctt 356  Q
    ||||||||||||||| |||||||||||| ||||||  |||||||||||||||    
T  18736604 caagttacctgtttt-ggttgcagaaaaataagca--gcggttaggattctt 18736556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 9e-49; HSPs: 60)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 20174738 - 20174596
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| || |||||||||||||    
T  20174738 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttactta 20174639  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| |||||| |||||||||||||| ||||||||||||||||    
T  20174638 ttttaagttgatgatataaaataaaatagttaagggttagaga 20174596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 121 - 383
Target Start/End: Original strand, 25618542 - 25618797
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttc 220  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || || |||    
T  25618542 tgatgtgcggattaggcaagcgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacaattc 25618641  T
Q  221 atgttacttatttttagttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaag-ttacctgtttt 319  Q
      || ||||||||||||||||||||||  ||||||||||| ||  ||||||||              |||| |||| || |||| ||| ||||||| |||    
T  25618642 gcgtaacttatttttagttgacgatat--aataaaagagtgaaaagttagaga--tttgcaatttttatctgtttgcaacagagaaagtttacctg-ttt 25618736  T
Q  320 tggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||||||  |||||| | |||||||||||||| || |||||||||||||||    
T  25618737 tggttgcagaaaagtaagca--gcggttcgaattcttcgaatccc-cccatttatattgttgga 25618797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 132 - 383
Target Start/End: Original strand, 32085459 - 32085704
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||| ||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || ||  || |||||||||    
T  32085459 ttaggtaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtctaaacagctcgtgttactta 32085558  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaa 330  Q
    |||| ||||||||||||||||||||||||||||| ||||||||              |||| |||| || |||||||||||||||  |||||||||||||    
T  32085559 ttttaagttgacgatataaaataaaagagttaagagttagaga---ttgcaatttttatctgtttgcaacagagcaagttacctg-gtttggttgcagaa 32085654  T
Q  331 aagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||  |||||||||| ||||  |||||| ||||||||| ||||||||    
T  32085655 aagtaagca--gcggttaggactctttaaatccc-cctatttattttgttgga 32085704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 122 - 239
Target Start/End: Complemental strand, 29719344 - 29719226
Alignment:
Q  122 gatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttc 220  Q
    ||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||| ||| || |||    
T  29719344 gatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagattatcgtatccacaaggattgtcgtttcgttcaaacaattc 29719245  T
Q  221 atgttacttatttttagtt 239  Q
      |||||||||||||||||    
T  29719244 gcgttacttatttttagtt 29719226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 15339223 - 15339316
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||| ||||||||||||| |||||| || ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  15339223 tgatgtgcggattaggcaagtgtaccaaatcatttaccaagtaataaagtgaaaagtagagtatcatatccacatggattgtcgtttcgtccaa 15339316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 17743576 - 17743475
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| || ||| ||||||||||||    
T  17743576 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttattt 17743477  T
Q  234 tt 235  Q
    ||    
T  17743476 tt 17743475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 25196028 - 25196111
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| || |||| ||||||||||||||    
T  25196028 ttaccaagtaataaagtgataagtagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttattttta 25196111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 135 - 235
Target Start/End: Original strand, 28925521 - 28925621
Alignment:
Q  135 ggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttt 234  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||  |  |||||||  ||||||||||||||||||| || ||||||||| |||||||    
T  28925521 ggcaagtgtactaaatcgttaccaagtaataaagtgataagtagagcgttgtatccacgtggattgtcgtttcgtccaaacaattcatgttatttatttt 28925620  T
Q  235 t 235  Q
    |    
T  28925621 t 28925621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 25888334 - 25888247
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  25888334 tgatgtgcggattaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcgtttc 25888247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 25535296 - 25535374
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| |||||||| | || ||| ||||||||||||||    
T  25535296 caagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttattttt 25535374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 45621962 - 45621880
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||| || ||| ||||||||||||||    
T  45621962 ttaccaagtaataaagtgagaagtagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgttacttattttt 45621880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 27909219 - 27909118
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| || || | ||||| ||||| || |||| |||||||||||    
T  27909219 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttattt 27909120  T
Q  234 tt 235  Q
    ||    
T  27909119 tt 27909118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 271
Target Start/End: Complemental strand, 25885562 - 25885423
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||| | |||| ||||||||| || ||||||||| |||||||| | |||||| |||||||| | ||||||||||||||||| || ||  |||||||||    
T  25885562 ttaggcgattgtaccaaatcgtttacaaagtaataa-gtgataagaatagtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttactta 25885464  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttaga 271  Q
    ||||     ||||||||||||||||||||||||||||||||    
T  25885463 ttttattccgacgatataaaataaaagagttaagggttaga 25885423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 26603309 - 26603217
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || ||||||  ||||||||||||||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||||    
T  26603309 atctgtttgcaacagagcagtttacctgtttttggttgtagaaaagtaagca--gcggttaggattcttcgaatccc-cctatttatattgttgga 26603217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 31805014 - 31804862
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||  ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||||||  ||||||||| ||||| |||||||||||| || |     
T  31805014 tgatgtgcgaattaggaaagtgtaccaaattgtttaccaaataataaagtgataagtagagtattgtatccacagagattgccgtttcgtccaaccaatc 31804915  T
Q  220 catgttacttattttt---agttgacgatataaaataaaagagttaagggttagaga 273  Q
      ||||||||||||||   ||||||||||||  |||||||||  |||||||||||||    
T  31804914 tgtgttacttatttttgtaagttgacgatat--aataaaaga--taagggttagaga 31804862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 273
Target Start/End: Complemental strand, 11382851 - 11382715
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| | |||||  |||| |||||  | |||  |||||||||||||    
T  11382851 caagtgtatcaaatcgtttaccagataataaagtgataagtagagtatcatatccacatgaattgtattttcatccaaataattcgcgttacttattttt 11382752  T
Q  236 ag-ttgacgatataaaataaaagagttaagggttagaga 273  Q
    || ||||||  |||| |||||||||||||  ||||||||    
T  11382751 agtttgacg--ataagataaaagagttaaaagttagaga 11382715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 9774440 - 9774325
Alignment:
Q  127 gcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgtta 226  Q
    |||| |||||||| |||||| || |||||||||| |||||||||||  |||||||||| |||||||| |||||||||||| |||||| || ||   ||||    
T  9774440 gcggattaggcaaatgtatcgaaccgttaccaaggaataaagtgat--gtagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgtta 9774343  T
Q  227 cttatttttagttgacga 244  Q
    ||||||||||||| ||||    
T  9774342 cttatttttagttaacga 9774325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 45553126 - 45553228
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| | ||||||||||||||||||||| | |||| |||  |||||||||||||||| ||||||||| ||| ||||| |||    
T  45553126 ttaggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtaaaatatcgtatttacagggattgtcgttttgtccaagcaattcgtgttaatta 45553225  T
Q  231 ttt 233  Q
    |||    
T  45553226 ttt 45553228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 8503174 - 8503097
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||||| ||||    
T  8503174 tttaggcaagtgtaccaaatcgtttaccaagtaataacgtgataagtagaggatcatatccacatggattgtcatttc 8503097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 27909068 - 27908975
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||| ||||||||| |||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  27909068 atctgtttgcaacagagcaagtttacctgtttt-ggttgcagaaaattaagcagcg--gttaggattcttcgaatcccccctatttatattgttgga 27908975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 17349343 - 17349472
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||| | |||||||| ||||  |||||||| |||||||||||||||| ||||||||||||| ||||||||  |||||||||||||||||| || ||    
T  17349343 tgatgtgcagattaggcaa-tgtactaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaagattgtcgtttcgtccaaacattt 17349440  T
Q  220 catgttacttattt--ttagttgacgatataa 249  Q
    |  |||||||||||  | ||||||||||||||    
T  17349441 cgcgttacttattttgtaagttgacgatataa 17349472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 25887853 - 25887760
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||||||| ||||||||||||||||||||| ||  ||| ||| |||||||| |||||| ||||||||||||||||||    
T  25887853 atctgtttgcaacagagcaagttacctatttttggttgcagaaaagtaacca--gcgattatgattcttcaaatcccccctatttatattgttgga 25887760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 17635875 - 17635755
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    ||||| |||| ||||||||| |||||||||||||| || |||||||| ||||||||||||| ||||||||||||||| ||  |  ||| |||||||||||    
T  17635875 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatccacagagattgtcgtttcgtcaaaaaaactcacgttacttattt 17635776  T
Q  234 tt---agttgacgatataaaa 251  Q
    ||   |||||||||| |||||    
T  17635775 ttgtaagttgacgatgtaaaa 17635755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 24091003 - 24090925
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||||||||| |||| |||| |||||||| |||||||| |||||||||| || ||| ||||||||||||||    
T  24091003 caagtaataaagtgataaatagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttattttt 24090925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 25530469 - 25530523
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtcc 211  Q
    |||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  25530469 caagtaataaagtgataagtagagtatcgtatccacagggattgtcctttcgtcc 25530523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 12953397 - 12953293
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| |||||| || | ||||||||||||| |||||||||||||  | |||||| |||||||||||||||| || || |||  ||||||||    
T  12953397 ttaggcaagtgtaccaaatcatttatcaagtaataaagtaataagtagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttactta 12953298  T
Q  231 ttttt 235  Q
    |||||    
T  12953297 ttttt 12953293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 20173411 - 20173347
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatca 185  Q
    |||||||||| ||||| ||||||| |||||||||||||||| ||||||||||||| |||||||||    
T  20173411 tgatgtgcggattaggaaagtgtaccaaatcgttaccaagttataaagtgataagcagagtatca 20173347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 27418389 - 27418465
Alignment:
Q  158 aagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttt 234  Q
    |||||||||||||||||||||||||||||||||||| ||||| || ||||  |||| || ||| |||||||||||||    
T  27418389 aagtaataaagtgataagtagagtatcatatccacatggattatcatttcaaccaaacaattcgtgttacttatttt 27418465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 173 - 273
Target Start/End: Complemental strand, 28606239 - 28606139
Alignment:
Q  173 aagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaagagttaagggttagag 272  Q
    |||||||||||| |||||||  |||||||||||||||| || ||  |   |||||||||||| ||||||||||||| ||||||||||  |||||||||||    
T  28606239 aagtagagtatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttattttaagttgacgatatataataaaagagacaagggttagag 28606140  T
Q  273 a 273  Q
    |    
T  28606139 a 28606139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 8447153 - 8447079
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||||| |||| |||||||| |||||||||||    
T  8447153 tttaggcaagtgtaccaaatcgtttaccaagtaataaagt-ataagtagattatcgtatccacatggattgtcgtt 8447079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 26603464 - 26603349
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| ||||||||||||| ||||| ||| | ||||||| |||||||||||||||||||| |||  | | |||||||| |||||| ||| || ||    
T  26603464 tgatgtgcggattaggcaagtgtaccaaattgtttatcaagtaaaaaagtgataagtagagtatcgtatttatatggattgtcttttcgtgcaaacaatt 26603365  T
Q  220 catgttacttattttt 235  Q
     | |||||||||||||    
T  26603364 gacgttacttattttt 26603349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 30411696 - 30411754
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtcc 211  Q
    |||||| ||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  30411696 ttaccatgtaataaagtgataagtagagtatcgtatcaacagggattgtcatttcgtcc 30411754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 17349497 - 17349591
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||| || |||||||||||||| |||||||||||  ||||| || ||||||||||||||  |||||||||||||||||    
T  17349497 atctgtttgcaacagagcaagtttacttgtttttggttgcaaaaaagtaagca--gcggtcagaattcttcgaatcccctctatttatattgttgga 17349591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 30411816 - 30411909
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||| || ||||||||||||||||||||||||||  |||||||||||| |||||||||| ||| || |||||||||||    
T  30411816 atctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagca--gcggttaggatttttcgaatccc-cctgttcatattgttgga 30411909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 17675730 - 17675654
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    ||||| |||| ||||||||| |||||||||||||| || |||||||| |||||||| |||| |||||||||||||||    
T  17675730 ggcaaatgtagcaaatcgtttaccaagtaataaagagaaaagtagagaatcatatcaacagagattgtcgtttcgtc 17675654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 19200237 - 19200130
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| |||||| || ||||| |||||| ||||||||| ||||||| |||||||| ||||||||||||| ||||| ||  |||  |||||||    
T  19200237 ttaggcaagtgtaccaaatcttttaccaaataataatgtgataagt-gagtatcgtatccacaaggattgtcgtttcatccaaacaactcacattactta 19200139  T
Q  231 tttttagtt 239  Q
    |||| ||||    
T  19200138 ttttaagtt 19200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 246
Target Start/End: Original strand, 13776335 - 13776449
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| |||||||| ||||||||| |  || |||||||||||||||| ||||||| ||||||||  ||||||| |||||||||| ||   || ||||||||    
T  13776335 ttagacaagtgtagcaaatcgtttattaaataataaagtgataagt-gagtatcgtatccacatagattgtcatttcgtccaaacaacccacgttactta 13776433  T
Q  231 tttttagttgacgata 246  Q
    |||| |||||||||||    
T  13776434 ttttaagttgacgata 13776449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 301 - 374
Target Start/End: Complemental strand, 29719169 - 29719097
Alignment:
Q  301 agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat 374  Q
    |||||||||| |||||| ||||||||||||||||||||||  || ||||||||||||||||||||  ||||||||    
T  29719169 agagcaagtttacctgtgtttggttgcagaaaagtaagca--gcagttaggattcttcgaatcccctctatttat 29719097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 271
Target Start/End: Complemental strand, 23011864 - 23011725
Alignment:
Q  133 taggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttat 231  Q
    |||||||||||| |||||  || |||||||||||||||| |||||||| |||  |||||||| |||||||||||| ||| || || ||   |||| ||||    
T  23011864 taggcaagtgtaccaaattttttaccaagtaataaagtg-taagtagattattgtatccacaaggattgtcgttttgtctaaacaatttgcgttatttat 23011766  T
Q  232 ttttagttgacgatataa-aataaaagagttaagggttaga 271  Q
    ||    | |||||||||| ||||||||||||||||||||||    
T  23011765 ttagtctagacgatataataataaaagagttaagggttaga 23011725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 26667465 - 26667518
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||||| |||||||||||||||| ||  |||||||||||||||||||||||    
T  26667465 ttacctgttttcggttgcagaaaagtaaaca--gcggttaggattcttcgaatccc 26667518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 28770524 - 28770444
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    ||||||| |||||||||||||||||||||||| |||||| ||| | |||| |||| ||||| || |||| | |||||||||    
T  28770524 ttaccaaataataaagtgataagtagagtatcgtatccataggtaatgtcttttcatccaaacaattcacgctacttattt 28770444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 273
Target Start/End: Original strand, 29027514 - 29027634
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaat 252  Q
    ||||||| |||||||||||| || |||||||  ||| |||| | ||||| |||| || |||  | ||   |||||||||||| ||||| |||||| ||||    
T  29027514 ttaccaaataataaagtgatgagcagagtattgtattcacatgaattgttgttttgtgcaaataatttgcgttacttattttaagttgccgatattaaat 29027613  T
Q  253 aaaagagttaagggttagaga 273  Q
    ||||||| |||||||||||||    
T  29027614 aaaagagataagggttagaga 29027634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 15339392 - 15339476
Alignment:
Q  293 tttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattg 378  Q
    |||| || |||||||||| | |||||||| ||||||||||||||||||  || ||||||||||||| ||||||  ||||||||||||    
T  15339392 tttgcaacagagcaagtttatctgttttttgttgcagaaaagtaagca--gcagttaggattcttcaaatcccctctatttatattg 15339476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 5777213 - 5777314
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||||||||||| |||||| | ||| |||||||||  |||||| ||||||  ||| | | ||||||||||||||||||| || |||| ||||||||    
T  5777213 ttaggcaagtgtatcatatcgtttatcaaataataaagtt-taagtaaagtatcgaatctatatggattgtcgtttcgtccaaacaattcacgttactta 5777311  T
Q  231 ttt 233  Q
    |||    
T  5777312 ttt 5777314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 311 - 364
Target Start/End: Original strand, 17198029 - 17198080
Alignment:
Q  311 acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| ||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  17198029 acctatttttggttgcagaaaagtaagca--gcggttaagattcttcgaatccc 17198080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 12557812 - 12557736
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||| |||||| || |||||||||||||||| |||||||| ||||  ||||||| |||||| ||||||    
T  12557812 tttaggcaagtgtaccaaatcttttaccaagtaataaagtg-taagtagaatatcgaatccacaaggattgccgtttc 12557736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 31804827 - 31804794
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcg 342  Q
    ||||||||||||||||||||||||||||||||||    
T  31804827 ttacctgtttttggttgcagaaaagtaagcagcg 31804794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 28925700 - 28925745
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||||||||||||||||  | |||||||||||||||||||||    
T  28925700 ttttggttgcagaaaagtaagca--gaggttaggattcttcgaatccc 28925745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 88
Target Start/End: Original strand, 40499636 - 40499668
Alignment:
Q  56 gggttattttctttatatatagtatagatataa 88  Q
    |||||||||||||||||||||||||||||||||    
T  40499636 gggttattttctttatatatagtatagatataa 40499668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 25070123 - 25070197
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    ||||| ||||| |||||||||||| | ||| |||||||||| |||||||||||||  ||||||| |||||||||||    
T  25070123 tttagacaagtatatcaaatcgtttatcaaataataaagtg-taagtagagtatcgcatccacaaggattgtcgtt 25070197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 172 - 235
Target Start/End: Original strand, 25920303 - 25920366
Alignment:
Q  172 taagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||| |||||||| |||||||| |||||||| | || |||  |||||||||||||    
T  25920303 taagtagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttattttt 25920366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 26667339 - 26667418
Alignment:
Q  157 caagtaataaagtga-taagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||| | ||||||||||||| |||||||||||||| || |||||| | | || |||  |||||||||||||    
T  26667339 caagtaataaagttagtaagtagagtatcgtatccacagggattttcctttcgtacgaacaattctcgttacttattttt 26667418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 85
Target Start/End: Complemental strand, 15508331 - 15508298
Alignment:
Q  52 aaacgggttattttctttatatatagtatagata 85  Q
    |||||||||| |||||||||||||||||||||||    
T  15508331 aaacgggttactttctttatatatagtatagata 15508298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 17675578 - 17675485
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||| ||||||||| |||||||||||| ||| |||||  ||||| ||| ||||||| || ||| ||||||||||||||    
T  17675578 atctgtttgcaacagagcaagtttacctgtttt-ggttgcagaaaaataaacagcg--gttagaatttttcgaattccccctgtttatattgttgga 17675485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 36817803 - 36817832
Alignment:
Q  58 gttattttctttatatatagtatagatata 87  Q
    ||||||||||||||||||||||||||||||    
T  36817803 gttattttctttatatatagtatagatata 36817832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 208
Target Start/End: Original strand, 17889938 - 17890009
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcg 208  Q
    |||||||| ||||||||| || || ||||| |||| ||||||| ||||||||| || ||||||||||||||||    
T  17889938 caagtgtaccaaatcgtttactaaataatacagtg-taagtagggtatcatattcatagggattgtcgtttcg 17890009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 18554010 - 18553939
Alignment:
Q  131 tttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtc 202  Q
    ||||||||||||||  |||| | ||| |||||| |||||| |||| |||||||||||||| ||||||||||||    
T  18554010 tttaggcaagtgtacaaaattggttatcaagtagtaaagt-ataattagagtatcatatctacagggattgtc 18553939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 24090859 - 24090814
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||||||||||||||||  | ||||||||| |||||||||||    
T  24090859 ttttggttgcagaaaagtaagca--gtggttaggatgcttcgaatccc 24090814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 25530614 - 25530659
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||||| || |||||||||||  ||||||||||||||||||||    
T  25530614 ttttggttgcaaaatagtaagcagcg--gttaggattcttcgaatccc 25530659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 25535440 - 25535485
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||||| |||||||||||  |||||| ||||||||||||||||    
T  25535440 ttttggttgcaaaaaagtaagca--gcggttgggattcttcgaatccc 25535485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 2e-46; HSPs: 73)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 121 - 383
Target Start/End: Complemental strand, 12183445 - 12183188
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| ||| ||||||||| ||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||| |||||||| | || ||    
T  12183445 tgatgtgcggattatgcaagtgtaccaaatcgtttaccaagtaataaagtgataagtacagtatcgtatccacatggattgtcatttcgtcctaacaatt 12183346  T
Q  220 catgttacttatttttagttgacgatataaaataaaagag-ttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgttt 318  Q
    || |||||||||||| || ||||||||||||||||||||| |||| |||||||||              |||| |||| || | ||||||||||||| ||    
T  12183345 cacgttacttattttaaggtgacgatataaaataaaagagtttaaaggttagaga---ttgcaatgtttatctgtttgcaacatagcaagttacctg-tt 12183250  T
Q  319 ttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||| ||||||||||||||   |||||||||||||||||||||| ||||||||||||||||||    
T  12183249 ttggttacagaaaagtaagca--acggttaggattcttcgaatccc-cctatttatattgttgga 12183188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 23143707 - 23143838
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| ||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||    
T  23143707 tgatgtgcggattaggcaagtgtaccaaatcatttaccaattaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaaacaatt 23143806  T
Q  220 catgttacttattt--ttagttgacgatataa 249  Q
    ||||||||||||||  | ||||||||||||||    
T  23143807 catgttacttattttgtaagttgacgatataa 23143838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 119 - 246
Target Start/End: Complemental strand, 21672551 - 21672423
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcac 217  Q
    |||||||||||| ||||||||||| | ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| || |||||||||| ||     
T  21672551 actgatgtgcggattaggcaagtgcaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaa 21672452  T
Q  218 ttcatgttacttatttttagttgacgata 246  Q
    ||| |||||||| ||||||||||||||||    
T  21672451 ttcgtgttacttttttttagttgacgata 21672423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 119 - 246
Target Start/End: Complemental strand, 21679967 - 21679839
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcac 217  Q
    |||||||||||| ||||||||||| | ||||||||| || ||||||||||||||||||||||||||| |||||||| ||||| || |||||||||| ||     
T  21679967 actgatgtgcggattaggcaagtgcaccaaatcgtttactaagtaataaagtgataagtagagtatcgtatccacatggattatcttttcgtccaaacaa 21679868  T
Q  218 ttcatgttacttatttttagttgacgata 246  Q
    ||| |||||||| ||||||||||||||||    
T  21679867 ttcgtgttacttttttttagttgacgata 21679839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 271
Target Start/End: Original strand, 21907428 - 21907568
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||||| || ||||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||  |  ||  ||||||||    
T  21907428 ttaggcaagtataccaaatcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaaaaagtcgcgttactta 21907527  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttaga 271  Q
     ||| |||||| ||||||||||||||||| |||||||||||    
T  21907528 atttaagttgatgatataaaataaaagagataagggttaga 21907568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 22567836 - 22567978
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||| ||| |||||||||||| |||| ||||| |||||  |||||||| ||||||| ||||||||||| ||  ||| ||||||||    
T  22567836 ttaggcaagtgtaccaaattgtttaccaagtaataacgtgaaaagtatagtattgtatccacatggattgtggtttcgtccaaacaactcacgttactta 22567935  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| |||| ||||||||||||||||| |||||||||||||||    
T  22567936 ttttaagttaacgatataaaataaaagggttaagggttagaga 22567978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 132 - 271
Target Start/End: Original strand, 11176946 - 11177086
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| | ||||||| ||| |||| ||||||||||||||||||||| |||||||| || |||||||||| || ||  | ||| |||||||||    
T  11176946 ttaggcaagtgtacccaatcgtttaccgagtactaaagtgataagtagagtatcgtatccacatgggttgtcgtttcttcgaaataattcgtgttactta 11177045  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttaga 271  Q
    |||| | |||||||||||||||||||||| |||||||||||    
T  11177046 ttttaaattgacgatataaaataaaagagataagggttaga 11177086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 161 - 273
Target Start/End: Complemental strand, 28933733 - 28933621
Alignment:
Q  161 taataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaagagt 260  Q
    |||||||||||||||||||||||| |||||||| ||||| ||||||||||||| || ||  |||| |||||||| |||||| |||||||||||||||||     
T  28933733 taataaagtgataagtagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttgcttattttaagttgatgatataaaataaaagaga 28933634  T
Q  261 taagggttagaga 273  Q
    |||||||||||||    
T  28933633 taagggttagaga 28933621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 9726018 - 9726120
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||   ||||||||    
T  9726018 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgttactta 9726117  T
Q  231 ttt 233  Q
    |||    
T  9726118 ttt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 138 - 382
Target Start/End: Complemental strand, 23844562 - 23844322
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt- 235  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||  ||  |||||||||||||     
T  23844562 aagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatttttg 23844463  T
Q  236 --agttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaag-ttacctgtttttggttgcagaaaa 332  Q
      |||||||||||||||| | ||     |||||||||| |              |||| |||| |||||| |||| ||||||| ||||||||||| ||||    
T  23844462 taagttgacgatataaaagataa-----aagggttaga-aatgttgcaatttttatctgtttgcaatagaccaagtttacctg-ttttggttgcataaaa 23844370  T
Q  333 gtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgg 382  Q
    |||||||  |||||||||||| |||||||||||||| |||||||||||||    
T  23844369 gtaagca--gcggttaggatttttcgaatccctcctgtttatattgttgg 23844322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 132 - 363
Target Start/End: Complemental strand, 27737792 - 27737565
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||||||||  |||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||| || |||  ||||||||    
T  27737792 ttaggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttactta 27737693  T
Q  231 ttttt---agttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaag-ttacctgtttttggttgc 326  Q
    |||||   ||||||||  ||||||| |||||  |||||||||||||              |||| |||| || |||||||| |||||||||||| |||||    
T  27737692 tttttgtaagttgacg--ataaaatgaaaga--taagggttagaga--gttgcaatttttatctgtttgcaacagagcaagtttacctgttttt-gttgc 27737600  T
Q  327 agaaaagtaagcagcgcggttaggattcttcgaatcc 363  Q
    | |||||||||||  ||||||||||||||||||||||    
T  27737599 aaaaaagtaagca--gcggttaggattcttcgaatcc 27737565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 22410408 - 22410311
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt-agttgacgatataa 249  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| | ||| || |||| ||||||||||||| ||||||||||||||    
T  22410408 ttaccaagtaataaaatgataagtagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttatttttaagttgacgatataa 22410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 137 - 251
Target Start/End: Original strand, 9516786 - 9516904
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||| ||||||||| ||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||  ||  |||||||||||||    
T  9516786 caagtgtaccaaatcgtttacctagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttattttt 9516885  T
Q  236 ---agttgacgatataaaa 251  Q
       ||||||||||||||||    
T  9516886 gtaagttgacgatataaaa 9516904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 123 - 273
Target Start/End: Original strand, 4339722 - 4339873
Alignment:
Q  123 atgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttca 221  Q
    ||||| || |||| |||||||| ||||| ||| | ||| |||||||||||||||||||||||  ||||||||  ||||||||||| |||||| || |||     
T  4339722 atgtgtggattagacaagtgtaccaaattgtttatcaaataataaagtgataagtagagtattgtatccacaatgattgtcgttttgtccaaccaattcg 4339821  T
Q  222 tgttacttatttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
      |||||||||||   |||||||||||||||||||||| |||||||||||||    
T  4339822 cattacttattttagtttgacgatataaaataaaagagataagggttagaga 4339873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 8241273 - 8241413
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| || |||||| |||||||||||||||||||| |||||||| || ||| ||||| |||||| || ||||  |||||||    
T  8241273 ttaggcaagtgtaccaaatcgtttacgaagtaagaaagtgataagtagagtatcgtatccacaagg-ttg-cgttttgtccaaacaattcacattactta 8241370  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    ||||   || |||||||||||||||||||||||| ||||||||    
T  8241371 ttttagtttcacgatataaaataaaagagttaagagttagaga 8241413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 17729140 - 17729230
Alignment:
Q  124 tgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||| ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  17729140 tgtgcggattaggtaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaagattgtcgtttcgtccaa 17729230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 21688898 - 21688756
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||| ||||||| | ||||||| || ||||||| ||||||||||||||||||  |||||| ||||||||||||| | |||||  | |||  ||||||||    
T  21688898 ttaggaaagtgtacccaatcgtttactaagtaatcaagtgataagtagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgttactta 21688799  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| |||||| ||||||||||||||||||||  |||||||||    
T  21688798 ttttgagttgaagatataaaataaaagagttagaggttagaga 21688756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 15466366 - 15466508
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |||||||||||||||| || |||||||||| |||| | |||||||||| ||||||| || || |||  |||| |||    
T  15466366 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-tacgtagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgttagtta 15466464  T
Q  231 tttttagttgacgatataa-aataaaagagttaagggttagaga 273  Q
    ||||   || ||||||||| ||||||||||||||||||||||||    
T  15466465 ttttgttttaacgatataataataaaagagttaagggttagaga 15466508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 121 - 263
Target Start/End: Complemental strand, 18075502 - 18075360
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcact- 218  Q
    |||||||||| ||||| |||||||  |||| ||| ||||||||||||||||||||| |||||||| |||||||  |||||||||||| |||||| || |     
T  18075502 tgatgtgcggattaggaaagtgtacgaaattgtttaccaagtaataaagtgataagcagagtatcgtatccacgtggattgtcgttttgtccaaacaatc 18075403  T
Q  219 tcatgttacttatttttagttgacgatataaaataaaagagttaa 263  Q
    | |  |||||||||||||||||||   ||||||||||||||||||    
T  18075402 tgagtttacttatttttagttgac--aataaaataaaagagttaa 18075360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 23645861 - 23645788
Alignment:
Q  141 tgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  23645861 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcgtccaa 23645788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 132 - 232
Target Start/End: Complemental strand, 25927406 - 25927305
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| |||| |||| ||||||||||||||||||||||||| |||| |||||||| ||||| | ||||||||||| || |||| ||||||||    
T  25927406 ttaggcaagtgtaccaaaacgtttaccaagtaataaagtgataagtagaatatcgtatccacatggattttagtttcgtccaaacaattcacgttactta 25927307  T
Q  231 tt 232  Q
    ||    
T  25927306 tt 25927305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 22566243 - 22566163
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||| ||||| |||  |||||||||||    
T  22566243 ttaccaagtaataaagtgataagtagagtatcatatccacaagaattgtcgcttcgtctaagcaattcgcgttacttattt 22566163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 301 - 383
Target Start/End: Original strand, 14637030 - 14637110
Alignment:
Q  301 agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||| |||||||||||||||||||||||||||||  |||  |||||||||||||||||| ||||||||||||||||||    
T  14637030 agagcaagtttacctgtttttggttgcagaaaagtaagca--gcgaataggattcttcgaatccc-cctatttatattgttgga 14637110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 273
Target Start/End: Original strand, 9838380 - 9838494
Alignment:
Q  159 agtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaaga 258  Q
    |||||||||||||||||||||||||  |||||||| |||||||| ||| ||  || ||  ||  ||||||||||||   |||||||||||||||||||||    
T  9838380 agtaataaagtgataagtagagtattgtatccacatggattgtcattttgttgaaacaactcgcgttacttattttagtttgacgatataaaataaaaga 9838479  T
Q  259 gttaagggttagaga 273  Q
    || ||| ||||||||    
T  9838480 gtgaagcgttagaga 9838494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 23232064 - 23231982
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||||||||||||||||| |||||||||||| | | ||||||| ||||||||| || |||  |||||||||||||    
T  23232064 ttaccaagtaataaagtgataagtagggtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttattttt 23231982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 137 - 213
Target Start/End: Complemental strand, 20005977 - 20005900
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||| ||||||||| ||||||||||||||||||||| |||||||| |||| ||| ||||| |||||||||||||    
T  20005977 caagtgtaccaaatcgtttaccaagtaataaagtgataagcagagtatcgtatctacatggattttcgtttcgtccaa 20005900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 14079560 - 14079494
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 184  Q
    |||||||||||  ||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||    
T  14079560 actgatgtgcgaattaggcaagtgtaccaaatcgtttaccaagttataaagtgataagtagagtatc 14079494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 24657532 - 24657454
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||| |||||||| ||||||| ||||||||||||||||  |||||||| | || ||| ||||||||||||||    
T  24657532 caagtaataaaatgataagtcgagtatcgtatccacagggattgttttttcgtccgaacaattcttgttacttattttt 24657454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 141 - 233
Target Start/End: Complemental strand, 17299925 - 17299832
Alignment:
Q  141 tgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| ||| ||  ||||||||||||| |||||| || ||   |||||||||||    
T  17299925 tgtagcaaatcgtttaccaagtaataaagtgataagtagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttattt 17299832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 158 - 235
Target Start/End: Complemental strand, 17827168 - 17827091
Alignment:
Q  158 aagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||| |||| ||||||||| |||||||| ||||||||||||| ||||| || |||  |||||||||||||    
T  17827168 aagtaataaagttataaatagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattttt 17827091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 27124589 - 27124473
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt- 235  Q
    ||||||| ||||||||| |||||||||||||||||||| || | |||| |||| ||| ||||||||||||||  ||| || |||  |||||||||||||     
T  27124589 aagtgtaccaaatcgtttaccaagtaataaagtgataattatattatcgtatcgacatggattgtcgtttcgagcaaacaattctcgttacttatttttg 27124490  T
Q  236 -agttgacgatataaaa 251  Q
     | ||||||||||||||    
T  27124489 aacttgacgatataaaa 27124473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 28586134 - 28586057
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||| ||||| || ||||||||| ||| ||||||||| ||||||||||||||||||||| ||| |||||||||||||    
T  28586134 tttagacaagtataccaaatcgtttaccgagtaataaattgataagtagagtatcatatcgacatggattgtcgtttc 28586057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 184
Target Start/End: Original strand, 5624625 - 5624689
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 184  Q
    |||||||||  |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||    
T  5624625 tgatgtgcgtattaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatc 5624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 5624790 - 5624883
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| |||||||||  ||||| | |||||||||||||||||||||||  ||||||||||||||||||||| | | || | |||||||||||    
T  5624790 atctgtttgtaatagagcagtttaccggcttttggttgcagaaaagtaagca--gcggttaggattcttcgaatctcccataatcatattgttgga 5624883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 14079379 - 14079314
Alignment:
Q  316 tttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||| |||||||||||||||||  ||||| ||||||||||| || ||||||||||||||||||    
T  14079379 tttttggttacagaaaagtaagcagcg--gttagaattcttcgaattccccctatttatattgttgga 14079314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 19244603 - 19244663
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||||||||||||||||||||||  ||| | || ||||||||||||||||||    
T  19244603 ttaccaagtaataaagtgataagtagagtatcgaatctatagagattgtcgtttcgtccaa 19244663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 8039234 - 8039097
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||  ||||||||| |||||||||||||||| ||||| ||||||| |||       |||||||||||| ||||| || ||| |||||||||    
T  8039234 ttaggcaagtgtgccaaatcgtttaccaagtaataaagtg-taagtggagtatcgtat-------gattgtcgtttcatccaaacaattcgtgttactta 8039143  T
Q  231 tttttagttgacgatataa----aataaaagagttaagggttagaga 273  Q
    ||||   ||||||||||||    ||||||||||||||||||||||||    
T  8039142 ttttgt-ttgacgatataataataataaaagagttaagggttagaga 8039097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 22413126 - 22413048
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||| |||||||||||||| |||| ||| |||||||  |||||||| | || ||| ||||||||||||||    
T  22413126 caagtaataaagttataagtagagtatcgtatctacatggattgttctttcgtccgaacaattcttgttacttattttt 22413048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 23009471 - 23009394
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||| |||| |||||  | ||| ||||||||||||||    
T  23009471 caagtattaaagtgataagtagagcatcgtatccacagggattgtcctttcttccaa-aaattcttgttacttattttt 23009394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 23778893 - 23778970
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||| |||| |||||  | ||| ||||||||||||||    
T  23778893 caagtattaaagtgataagtagagcatcgtatccacagggattgtcctttcttccaa-aaattcttgttacttattttt 23778970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 273
Target Start/End: Complemental strand, 6630771 - 6630653
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaat 252  Q
    ||||||||||||||  | ||||||||||||||  |||||||  ||||||||||||||| || |   |   |||||||||||| ||||||| |||||||||    
T  6630771 ttaccaagtaataa--taataagtagagtatcggatccacatagattgtcgtttcgtctaaaccgcttgcgttacttattttaagttgacaatataaaat 6630674  T
Q  253 aaaagagttaagggttagaga 273  Q
    ||||||  ||| |||||||||    
T  6630673 aaaagatataaaggttagaga 6630653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 20722279 - 20722209
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtc 202  Q
    ||||||||| |||| ||||||||| |||||||||||||||  |||||||||||| ||||||||| ||||||||    
T  20722279 tttaggcaaatgtaccaaatcgtttaccaagtaataaagt--taagtagagtataatatccacaaggattgtc 20722209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 21932155 - 21932102
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 184  Q
    ||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  21932155 ttaggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatc 21932102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Complemental strand, 20145163 - 20145111
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 183  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  20145163 ttaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtat 20145111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 22187676 - 22187728
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtat 183  Q
    ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||    
T  22187676 ttaggcaagtgtaccaaattgttcaccaagtaataaagtgataagtagagtat 22187728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 24251516 - 24251611
Alignment:
Q  136 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||| ||||||||||||||| ||||| |||| |||  |||||||||| ||||||| | |||||| || |||  ||||||||    
T  24251516 gcaagtgtatcaattcgtttaccaagtaataaagtcataagcagaggatcgcatccacagggtttgtcgtcttgtccaaacaattcgcgttactta 24251611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 176 - 235
Target Start/End: Complemental strand, 24252287 - 24252228
Alignment:
Q  176 tagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||| |||||||| |||||||||||| |||||| || ||| ||||||||||||||    
T  24252287 tagagtatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttattttt 24252228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 24475234 - 24475298
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||||||| || |  |||||||||||||||||| | ||| ||||||||||||||    
T  24475234 ttttggttgcagaaaagtaagtagtg--gttaggattcttcgaatctcccctgtttatattgttgga 24475298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 189
Target Start/End: Complemental strand, 7543063 - 7543005
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 189  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||||| |||||| ||||    
T  7543063 ttaggcaaatgtatcaaattgtttaccaagtaataaagtgataagtaaagtatcgtatc 7543005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 21841765 - 21841687
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||| |||||||||||| |   ||||||| |||||||| |||||||| | || ||| ||||||||||||||    
T  21841765 caagtaataaagagataagtagagttttgaatccacatggattgtcctttcgtccgaacatttcttgttacttattttt 21841687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 81
Target Start/End: Complemental strand, 23124256 - 23124178
Alignment:
Q  3 aaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtata 81  Q
    |||||| | |||||| |||||||||||||||||   | ||||| | |||||||  ||||||||||||||||||||||||    
T  23124256 aaaattaagggtaattttggaaagagaaaaagtcatcccaaaagaaccaaaacatgttattttctttatatatagtata 23124178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 17382163 - 17382216
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgttt 206  Q
    |||||||  ||||||||||| ||||||||||| |||| ||||||||||||||||    
T  17382163 ttaccaatgaataaagtgatgagtagagtatcgtatctacagggattgtcgttt 17382216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 17883776 - 17883699
Alignment:
Q  303 agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||| ||||||||||||||||| |||||||||||||  ||| ||| |||||||| |||||| ||  ||||||||||||||    
T  17883776 agcaatttacctgtttttggttggagaaaagtaagca--gcgtttatgattcttcaaatccc-ccagtttatattgttgga 17883699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 28589534 - 28589457
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||| ||||||||| | ||| ||| ||||||||||||| |||||| || ||||| ||||| |||||||    
T  28589534 tttaggcaagtgtaccaaatcgtttatcaaataacaaagtgataagtaaagtatcgtagccacatggattttcgtttc 28589457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 9899062 - 9898958
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtg-ataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactt 229  Q
    |||| |||||||| ||||| ||| |||||||||||||||  | |||||||||||  ||||||| |||||||| ||||||| ||| |  |||| |||||||    
T  9899062 ttagacaagtgtaccaaattgtttaccaagtaataaagtctaaaagtagagtattgtatccacggggattgttgtttcgttcaaaccattcacgttactt 9898963  T
Q  230 atttt 234  Q
    |||||    
T  9898962 atttt 9898958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 17883887 - 17883784
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| ||| |||| ||||||||| |||||||||||| ||| | ||||||| |||  ||| |||||||||||| |||||||||| || ||| |||||||||    
T  17883887 ttagccaaatgtaccaaatcgtttaccaagtaataacgtg-tgagtagaggatcgcatcgacagggattgtcctttcgtccaaacaattcgtgttactta 17883789  T
Q  231 ttttt 235  Q
     ||||    
T  17883788 ctttt 17883784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 20005846 - 20005793
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||||||||||||||||| ||| |||  ||||||| |||||||||||||||    
T  20005846 ttacctgtttttggttgcagaaaggtatgca--gcggttaagattcttcgaatccc 20005793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 24657389 - 24657344
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||||||||||||||||  |||||||| ||||||||||||||    
T  24657389 ttttggttgcagaaaagtaagca--gcggttagaattcttcgaatccc 24657344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 185
Target Start/End: Original strand, 26587622 - 26587670
Alignment:
Q  138 aagtgtatcaaatcgt-taccaagtaataaagtgataagtagagtatca 185  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  26587622 aagtgtatcaaatcgtataccacgtaataaagtgataagtagggtatca 26587670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 32333541 - 32333605
Alignment:
Q  23 aaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtatagatata 87  Q
    |||||||||||||  || ||||||| | |||| || ||||||||||||||||||||||| |||||    
T  32333541 aaagagaaaaagtcagctcaaaaaagctaaaagggattattttctttatatatagtataaatata 32333605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 301 - 383
Target Start/End: Complemental strand, 6630627 - 6630548
Alignment:
Q  301 agagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||||||||||||| ||| | ||  |  |||||||||| |||| |||| || ||||||||||||||||||    
T  6630627 agagcaagttacctgtttttggttgcaaaaatggaa--atagcggttaggactctttgaatacc-cctatttatattgttgga 6630548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 2586717 - 2586798
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||| ||||| ||| |||||||||| |||||||||||| |||||   ||||| |  ||||||||||||||||||    
T  2586717 ttaggcaagtgtaccaaattgtttaccaagtaatgaagtgataagtatagtat-gcatccaaaatgattgtcgtttcgtccaa 2586798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 364
Target Start/End: Original strand, 9838506 - 9838579
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| |||| || ||||||||||||| ||||| |||||||||||||||||||    |||||||||||||| ||||||    
T  9838506 atctgtttgcaaaagagcaagttacccgtttt-ggttgcagaaaagtaagca--atggttaggattcttcaaatccc 9838579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 11136067 - 11136121
Alignment:
Q  309 ttacctgtttttggttgcagaaaa-gtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||||||||||||| |||| ||||| ||||  ||||||||||||||||||||    
T  11136067 ttacctgtttttggttgcaaaaaaagtaagaagcg--gttaggattcttcgaatccc 11136121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 362
Target Start/End: Original strand, 1635127 - 1635183
Alignment:
Q  303 agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatc 362  Q
    |||||||||| |||||| ||||| |||||||||| |||||  ||||||||||||||||||    
T  1635127 agcaagttacatgtttt-ggttgtagaaaagtaaacagcg--gttaggattcttcgaatc 1635183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 14691079 - 14691111
Alignment:
Q  46 aatccaaaacgggttattttctttatatatagt 78  Q
    |||||||||||| ||||||||||||||||||||    
T  14691079 aatccaaaacggcttattttctttatatatagt 14691111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 84
Target Start/End: Complemental strand, 14965014 - 14964986
Alignment:
Q  56 gggttattttctttatatatagtatagat 84  Q
    |||||||||||||||||||||||||||||    
T  14965014 gggttattttctttatatatagtatagat 14964986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 20002484 - 20002440
Alignment:
Q  133 taggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagt 176  Q
    |||||||||||| ||||||  ||||||||||||||||||||||||    
T  20002484 taggcaagtgtaccaaatcaattaccaagtaataaagtgataagt 20002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 20145043 - 20144978
Alignment:
Q  316 tttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||| |||||||||||| ||||||||  || |||||||||||||||||  ||  |||||||||||||    
T  20145043 tttttagttgcagaaaagcaagcagcg--gtaaggattcttcgaatcccctctggttatattgttgga 20144978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 22187796 - 22187861
Alignment:
Q  316 tttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||| |||||||||||| ||||||||  || |||||||||||||||||  ||  |||||||||||||    
T  22187796 tttttagttgcagaaaagcaagcagcg--gtaaggattcttcgaatcccctctggttatattgttgga 22187861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 26215489 - 26215414
Alignment:
Q  131 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||  ||| |||||| || |||| |||||||||| ||||||||||||| |||||| |  ||||||||||||    
T  26215489 tttaggcaatagtaccaaatcatttccaaataataaagtg-taagtagagtatcgtatccatatagattgtcgtttc 26215414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 173
Target Start/End: Complemental strand, 34092363 - 34092327
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgata 173  Q
    ||||||||||||||||| |||||||||||||||||||    
T  34092363 aagtgtatcaaatcgtttaccaagtaataaagtgata 34092327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 229
Target Start/End: Original strand, 34478543 - 34478618
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactt 229  Q
    ||||||| |||||||||| ||||||||||||| |||||||| |||||| | ||||  | | ||| ||||||||||||    
T  34478543 ttaccaaataataaagtg-taagtagagtatcgtatccacaaggattgacatttcaactaggcaattcatgttactt 34478618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 724 - 867
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttc-atgttactt 229  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||  |||| ||| ||||||||||||||||||| || | | | |||||||    
T  724 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatcaacaaggattgtcgtttcgtccaaacaatccgacgttactt 823  T
Q  230 atttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    ||||| |||||| |||||||||||||||||||||||||||||||    
T  824 attttaagttgaagatataaaataaaagagttaagggttagaga 867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 8e-40; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 25550617 - 25550487
Alignment:
Q  122 gatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttc 220  Q
    ||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||    
T  25550617 gatgtgcagattaggcaagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcatttcgtccaaacaattc 25550518  T
Q  221 atgttacttattt--ttagttgacgatataa 249  Q
     ||||||||||||  | ||||||||||||||    
T  25550517 ttgttacttattttgtaagttgacgatataa 25550487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 132 - 268
Target Start/End: Complemental strand, 18208351 - 18208215
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| || ||||||||||||| ||||||||||||| |||||||| |||||||| |||||||||| || |||||||||||||    
T  18208351 ttaggcaagtgtaccaaatcgtttacaaagtaataaagtg-taagtagagtatcgtatccacatggattgtcctttcgtccaaacaattcatgttactta 18208253  T
Q  231 tttttagttgacgatataaaataaaagagttaagggtt 268  Q
    ||||   |||| ||||||||||||||||||||||||||    
T  18208252 ttttgttttgatgatataaaataaaagagttaagggtt 18208215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 271
Target Start/End: Complemental strand, 24267057 - 24266917
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||| || ||| |||||| || ||| |||||||||    
T  24267057 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttactta 24266959  T
Q  231 tttttagttgacgatataa-aataaaagagttaagggttaga 271  Q
    ||||   |||||||||||| ||||||||||||||||||||||    
T  24266958 ttttgttttgacgatataataataaaagagttaagggttaga 24266917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 132 - 271
Target Start/End: Complemental strand, 24343688 - 24343548
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||| |||||||| ||||| || ||| |||||| || ||| |||||||||    
T  24343688 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttactta 24343590  T
Q  231 tttttagttgacgatataa-aataaaagagttaagggttaga 271  Q
    ||||   |||||||||||| ||||||||||||||||||||||    
T  24343589 ttttgttttgacgatataataataaaagagttaagggttaga 24343548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 18937744 - 18937879
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |  |||||||||||||||||||| |||||| ||| || ||||||||| ||||||||||| || |||| ||||||||    
T  18937744 ttaggcaagtgtaccaaatcgtttattaagtaataaagtgataagta-agtatcgtattcagagggattgttgtttcgtccaaacaattcacgttactta 18937842  T
Q  231 tttttagttgacgatataaaataaaagagttaagggtt 268  Q
    |||| |||| | |||||||||| |||||||||||||||    
T  18937843 ttttaagttaatgatataaaat-aaagagttaagggtt 18937879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 153 - 273
Target Start/End: Original strand, 34487656 - 34487776
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataa-aa 251  Q
    |||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||| || || |||  ||||||||||||   |||||||||||| ||    
T  34487656 ttaccaagtaataaagtg-taagtagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttattttgttttgacgatataataa 34487754  T
Q  252 taaaagagttaagggttagaga 273  Q
    ||||| || |||||||||||||    
T  34487755 taaaaaagataagggttagaga 34487776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 153 - 273
Target Start/End: Complemental strand, 19283936 - 19283816
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaat 252  Q
    ||||||| |||||||||||||||||||||||  |||||||| | |||  |||||||||||| || ||    | ||||||||| ||||||||||||||| |    
T  19283936 ttaccaaataataaagtgataagtagagtattgtatccacaagaattaacgtttcgtccaaacaatttgcttaacttattttaagttgacgatataaagt 19283837  T
Q  253 aaaagagttaagggttagaga 273  Q
    |||||||||||||||||||||    
T  19283836 aaaagagttaagggttagaga 19283816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 15375982 - 15375903
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||| ||||||||| ||||| ||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  15375982 ggcaagtgtaccaaatcgtttaccaaataataaaatgataagtagagtatcctatccacagggattgtcgtttcgtccaa 15375903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 15690774 - 15690914
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||| |||| || ||||||||| ||||| |||||||||||||||||||||||| |||||||  | ||||||||||||||||| || |||  ||||||||    
T  15690774 ttaggtaagtttaccaaatcgtttaccaa-taataaagtgataagtagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttactta 15690872  T
Q  231 tttttagttgacgatataaaataaaagagtt-aagggttagaga 273  Q
    |||||||||||| | || ||||||||||||| ||||||||||||    
T  15690873 tttttagttgac-aaat-aaataaaagagttaaagggttagaga 15690914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 22755517 - 22755659
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| |||||||| | ||||||| |||||||||| ||| ||||||||||||||| |||||| | ||||||||||||| ||||| || ||    ||| |||    
T  22755517 ttagacaagtgtaccgaatcgtttaccaagtaatgaagagataagtagagtatcgtatccataaggattgtcgtttcttccaaacaattggcattattta 22755616  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    ||||   || |||||||||||||||||||||||||||||||||    
T  22755617 ttttagttttacgatataaaataaaagagttaagggttagaga 22755659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 19004326 - 19004225
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    ||||||||||  |||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||| ||| |||||| || |||| |||||||||||    
T  19004326 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtggagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttattt 19004227  T
Q  234 tt 235  Q
    ||    
T  19004226 tt 19004225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 23388917 - 23388837
Alignment:
Q  155 accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| | || ||| ||||||||||||||    
T  23388917 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattttt 23388837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 232
Target Start/End: Complemental strand, 19086276 - 19086181
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatt 232  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||| | ||||| |||| ||| || || |||||||||||||||    
T  19086276 aagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattatatccacatgaattgttgttttgtcaaatcaattcatgttacttatt 19086181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 24245642 - 24245543
Alignment:
Q  137 caagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||  ||||||| |||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||  ||  |||||||||||||    
T  24245642 caagtgtcacaaatcgcttaccatgtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttattttt 24245543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 25402440 - 25402299
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtta-ccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||| |||  ||||||||  ||||||||||||||||||  |||||||||||||||||||||||||| |    |||  ||||||||    
T  25402440 ttaggcaagtgtaccaaattgtttgccaagtaaggaagtgataagtagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttactta 25402341  T
Q  231 tttttag-ttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| || |||||   ||||||||||||||| ||||||||||||    
T  25402340 ttttaagtttgac--aataaaataaaagagtgaagggttagaga 25402299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 15469932 - 15470011
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| || ||||||| |||||||| | ||||||||||||||    
T  15469932 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataggtcgagtatcgtatccacatgaattgtcgtttcgtc 15470011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 17171656 - 17171553
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||| ||||||| |||||| || | |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| ||||| |||  |||| |||    
T  17171656 ttaggtaagtgtaccaaatcttttatcaagtaataaagtgataagtagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgttaatta 17171557  T
Q  231 tttt 234  Q
    ||||    
T  17171556 tttt 17171553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 24140460 - 24140543
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||| || |||  ||||| ||||||||    
T  24140460 ttaccaagtaataaagtgataagtagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatattttta 24140543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 153 - 252
Target Start/End: Complemental strand, 20315511 - 20315408
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt----agttgacgatata 248  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||| || |||||||||| || |||  || ||||||||||    |||||||||||||    
T  20315511 ttaccaagtaataatgtgataagtagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttatttttattaagttgacgatata 20315412  T
Q  249 aaat 252  Q
    ||||    
T  20315411 aaat 20315408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 24852275 - 24852173
Alignment:
Q  132 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||||| ||  |||||| ||||||||||||||| ||||||||| |||||| |||||||| ||||||| |||||||| || || |||| ||||||||    
T  24852275 ttaggcaagtctactaaatcgattaccaagtaataaaatgataagtatagtatcgtatccacatggattgttgtttcgtctaaacaattcacgttactta 24852176  T
Q  231 ttt 233  Q
    |||    
T  24852175 ttt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 17185481 - 17185561
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||  |||| || |||| ||||| |||||    
T  17185481 ttaccaaataataaagtgataagtagagtatcgtatctacagggattgtcgtttcaaccaaacaattcacgttacgtattt 17185561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 236
Target Start/End: Original strand, 17431884 - 17431984
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||  |||||||| ||||||||||||||||  |||||||||||| ||||||||| |||||||||||| ||||| ||  ||| | |||||||||||    
T  17431884 caagtgtactaaatcgtttaccaagtaataaagtggaaagtagagtatcgtatccacagagattgtcgtttcatccaaacaactcacgctacttattttt 17431983  T
Q  236 a 236  Q
    |    
T  17431984 a 17431984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 135 - 213
Target Start/End: Original strand, 34128636 - 34128714
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||| |||| |||||||||| |||||| ||||||||||    
T  34128636 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtagaatatcgtatccacaggaattgtcctttcgtccaa 34128714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 24167687 - 24167605
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||| |||||||| |||||||| |||||||||||||||  |||||||||||||||||  ||| ||||||||||||| |||||    
T  24167687 ttaggtaagtgtattaaatcgtttaccaagtaataaagtagtaagtagagtatcatatatacatggattgtcgtttcttccaa 24167605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 19051532 - 19051648
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcac 217  Q
    |||||||||||| ||||  ||||||| ||||||||| || ||||||||||||||||||| |||| || ||||| |||||||||| ||| | || || ||     
T  19051532 actgatgtgcggattagaaaagtgtaccaaatcgtttacaaagtaataaagtgataagttgagtgtcgtatcc-cagggattgttgttccatctaaacaa 19051630  T
Q  218 ttcatgttacttattttt 235  Q
    ||| ||||||||||||||    
T  19051631 ttcttgttacttattttt 19051648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 20744590 - 20744529
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgtt 380  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||| ||| |||||||||||    
T  20744590 ttttggttgtagaaaagtaagcagcg--gttaggattcttcgaatcccacctgtttatattgtt 20744529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 235
Target Start/End: Complemental strand, 20549766 - 20549703
Alignment:
Q  172 taagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||| ||||||||||||||||| |||||||| | || ||| ||||||||||||||    
T  20549766 taagtagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttattttt 20549703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 236
Target Start/End: Original strand, 39434480 - 39434563
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    ||||||||||||||| |||||||||||  ||| |||||||| |||||||| ||| |||||| || |||  ||||||||||||||    
T  39434480 ttaccaagtaataaattgataagtagaaaatcgtatccacatggattgtccttttgtccaaacaattcgcgttacttattttta 39434563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 17315177 - 17315099
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||| |||| ||| | || |||  |||||||||||||    
T  17315177 caagtaataaagtgataagtaaagtatcgtatccacatggattgtcctttcttccgaacaattctagttacttattttt 17315099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 20858707 - 20858785
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||| |||||||||||||||| ||||||| | ||||||| ||| |||| | || ||| ||||||||||||||    
T  20858707 caagtaataaaatgataagtagagtatcgtatccacggagattgtccttttgtccgaacaattcttgttacttattttt 20858785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 23014712 - 23014611
Alignment:
Q  131 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||||||||||  ||| ||| |||||||||||||||||||||||  |||||  | |||||||||||||  | | ||| |||| ||||||||    
T  23014712 tttaggcaagtgtatcaaatgattatcaaataataaagtgataagtagagtattgtatcc-taaggattgtcgtttcaactaggcaattcacgttactta 23014614  T
Q  231 ttt 233  Q
    |||    
T  23014613 ttt 23014611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 236
Target Start/End: Complemental strand, 26110564 - 26110460
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| | ||||||| | ||||||||||| || |||||||||||| ||||||||||||||| | ||||| ||||| || ||  |||||| ||    
T  26110564 ttaggcaagtgtaccgaatcgtttatcaagtaataaaatg-taagtagagtataatatccacagggatttttgtttcatccaatcaatttgtgttacata 26110466  T
Q  231 ttttta 236  Q
    ||||||    
T  26110465 ttttta 26110460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 364
Target Start/End: Original strand, 34128790 - 34128859
Alignment:
Q  293 tttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| ||||||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||||||||||    
T  34128790 tttgcaatagagcaagtttacctgtttt-ggttgcagaaaagtaagca--acggttaggattcttcgaatccc 34128859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 36175135 - 36175211
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||| ||||||||| |||||||||||||||| |  |||||||||| |||||| | |||||||||||||||||||    
T  36175135 caagtgtaccaaatcgtttaccaagtaataaagtgttt-gtagagtatcgtatccataaggattgtcgtttcgtccaa 36175211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 383
Target Start/End: Original strand, 15690940 - 15691017
Alignment:
Q  301 agagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||| ||||||||||| ||||||||||||||||||||    |||||||||||||||||||| |||||||||  |||||||    
T  15690940 agagcaaattacctgtttt-ggttgcagaaaagtaagcag---tgttaggattcttcgaatccc-cctatttattatgttgga 15691017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 17432061 - 17432125
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||||||||||||||  |||||||||||||||||||| ||   | ||||||||||||||    
T  17432061 ttttggttgcagaaaagtaagca--gcggttaggattcttcgaataccctatgtttatattgttgga 17432125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 20564158 - 20564079
Alignment:
Q  157 caagtaataaagtga-taagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||| | ||||||||||||| |||||||| |||||||  |||||||||| | ||||  |||||||||||||    
T  20564158 caagtaataaagttagtaagtagagtatcgtatccacatggattgttctttcgtccaaacgcttctagttacttattttt 20564079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 24245464 - 24245401
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||||||||||||||||| ||  |||||||||||||||||||| ||| ||||||||||||||    
T  24245464 ttttagttgcagaaaagtaagcaacg--gttaggattcttcgaatccc-cctgtttatattgttgga 24245401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 24662214 - 24662140
Alignment:
Q  196 gattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaagagttaagggttag 270  Q
    |||||| |||||| | || || |||| ||||||||||||   || ||||||||||||||||||||||||||||||    
T  24662214 gattgttgtttcgcctaaacaattcacgttacttattttagtttaacgatataaaataaaagagttaagggttag 24662140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 26120861 - 26120942
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||| ||||||| ||||| ||| |||| ||||||||||  ||||||||||||||||| || | |||||||||||||||||||    
T  26120861 ttaggaaagtgtaccaaattgtttaccatgtaataaagtt-taagtagagtatcatattcaaaaggattgtcgtttcgtccaa 26120942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 26121426 - 26121345
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||| ||||||||| | ||||||||||| || ||||||||||||  |||||||||||||| | ||||| |||||    
T  26121426 ttaggcaagtgtaccaaatcgtttagcaagtaataaaatg-taagtagagtatagtatccacagggatttttgtttcatccaa 26121345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 28664796 - 28664874
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||||||||||||||||||| ||| || ||||| |||| |||||| | | || |||  |||||||||||||    
T  28664796 caagtaataaagtgataagtagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttattttt 28664874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 372
Target Start/End: Complemental strand, 26121273 - 26121191
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctattt 372  Q
    |||| |||| || ||||||||||| || ||||||||| |||||||||||| |  | ||||||||||||| ||||||| |||||||    
T  26121273 atctgtttgcaagagagcaagttatctatttttggttacagaaaagtaagta--gtggttaggattctttgaatcccccctattt 26121191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 383
Target Start/End: Original strand, 36175298 - 36175374
Alignment:
Q  303 agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||| ||||| ||||||||||| ||||  |||| ||||||| ||||| ||||||||||| ||||||||    
T  36175298 agcaagttacctgtttt-ggttgtagaaaagtaagaagcg--gttatgattctttgaatctctcctatttat-ttgttgga 36175374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 360
Target Start/End: Complemental strand, 20549646 - 20549597
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaa 360  Q
    ||||||||||||||||||||  |||||||||  |||||||||||||||||||    
T  20549646 ttacctgtttttggttgcaggcaagtaagca--gcggttaggattcttcgaa 20549597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 202
Target Start/End: Original strand, 26502130 - 26502185
Alignment:
Q  146 caaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtc 202  Q
    |||| |||||||||||||||||||||||||| |||| || |||||||| ||||||||    
T  26502130 caaaccgttaccaagtaataaagtgataagt-gagtgtcgtatccacatggattgtc 26502185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 15544046 - 15544120
Alignment:
Q  131 tttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    |||||||||||||| ||||||| ||||||||||||||| || | ||||||||||| ||| || ||||||| |||||    
T  15544046 tttaggcaagtgtaccaaatcgtttaccaagtaataaactg-tcagtagagtatcgtatacatagggattatcgtt 15544120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 28253276 - 28253350
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    |||| |||| |||| ||||||||| |||||||||||||||| |||||||| |||| ||| |||||||||| |||||    
T  28253276 tttatgcaaatgtaccaaatcgtttaccaagtaataaagtg-taagtagaatatcgtattcacagggattatcgtt 28253350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 17315062 - 17314988
Alignment:
Q  288 atctatttgaaatagagc-aagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| |||| |||||||| |||||||||||||| ||||||| |||||||||||  ||||||| ||||||| |||||||    
T  17315062 atctttttgcaatagagcgaagttacctgtttt-ggttgcaaaaaagtaagca--gcggttaagattctttgaatccc 17314988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 309 - 362
Target Start/End: Complemental strand, 20564020 - 20563969
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatc 362  Q
    |||| |||||||||||||||||||||||| |  || ||||||||||||||||||    
T  20564020 ttacttgtttttggttgcagaaaagtaagaa--gcagttaggattcttcgaatc 20563969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 24656956 - 24656854
Alignment:
Q  132 ttaggcaagtgtatcaaatcgttacc-aagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| || || ||| || || ||||||| | |||||||||| |||| ||| ||| ||||||| |||||||| || || ||| |||||||||    
T  24656956 ttaggcaagtgtaccagatagtttcccaattaataaaattataagtagagaatcaaatcaacatggattgttgtttcgtctaaacaattcgtgttactta 24656857  T
Q  231 ttt 233  Q
    |||    
T  24656856 ttt 24656854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Complemental strand, 36226246 - 36226216
Alignment:
Q  57 ggttattttctttatatatagtatagatata 87  Q
    |||||||||||||||||||||||||||||||    
T  36226246 ggttattttctttatatatagtatagatata 36226216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 23380361 - 23380284
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||| ||||| ||| ||||||||||||| ||||||||| | |||| ||| || | |||||||| ||||    
T  23380361 tttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtcatttc 23380284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 32417459 - 32417391
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggatt 199  Q
    |||||| ||||||| ||||||||| | |||||||||||||| |||||||||||| ||||| ||| |||||    
T  32417459 tttaggtaagtgtaccaaatcgtttatcaagtaataaagtg-taagtagagtattatatcgacatggatt 32417391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 15375816 - 15375752
Alignment:
Q  316 tttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||| ||||||||| | ||  |||||||||||||||||||| |||||  |||||||||||    
T  15375816 tttttggttgcataaaagtaagtaacg--gttaggattcttcgaatccc-cctatacatattgttgga 15375752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 15492991 - 15492955
Alignment:
Q  138 aagtgtatcaaatcgttaccaagtaataaagtgataa 174  Q
    ||||||| |||||||||||||||| ||||||||||||    
T  15492991 aagtgtaccaaatcgttaccaagtgataaagtgataa 15492955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 16523731 - 16523678
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||||| |||  |||||||||||||  ||||||||||||||| |||||||    
T  16523731 ttacctgttttttgttatagaaaagtaagca--gcggttaggattctttgaatccc 16523678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 18937897 - 18937945
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaa 336  Q
    |||| |||| || |||||||||||| |||||||||||||||||| ||||    
T  18937897 atctgtttgcaacagagcaagttacatgtttttggttgcagaaatgtaa 18937945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 20858851 - 20858896
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||||| |||||||||||  ||||||||||||| |||||||||    
T  20858851 ttttggttgcataaaagtaagca--gcggttaggattcgtcgaatccc 20858896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 24265424 - 24265332
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| |||| |||||||||||| | ||| ||||||||||||||||||  |||||||||| | || |||| || ||||||||  ||||||||    
T  24265424 atctgtttgcaataaagcaagttacct-tatttagttgcagaaaagtaagca--gcggttaggactatttgaattccccctatttactttgttgga 24265332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 24342055 - 24341963
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| |||| |||||||||||| | ||| ||||||||||||||||||  |||||||||| | || |||| || ||||||||  ||||||||    
T  24342055 atctgtttgcaataaagcaagttacct-tatttagttgcagaaaagtaagca--gcggttaggactatttgaattccccctatttactttgttgga 24341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 233
Target Start/End: Complemental strand, 29263661 - 29263582
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    ||||||||||||||| |||||| ||||  ||| |||| ||| ||||||||||||   |||| || ||||||||||||||||    
T  29263661 ttaccaagtaataaaatgataattagac-atcgtatctacatggattgtcgttttaaccaaacaattcatgttacttattt 29263582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 56 - 84
Target Start/End: Complemental strand, 30841457 - 30841429
Alignment:
Q  56 gggttattttctttatatatagtatagat 84  Q
    |||||||||||||||||||||||||||||    
T  30841457 gggttattttctttatatatagtatagat 30841429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 60)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 34497111 - 34497254
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||||| |||||||||||| |||||||||||||||||| ||||||||||| |||||| || || ||||||||||||||| || | || ||||||||    
T  34497111 ttaggcaagtctatcaaatcgtttaccaagtaataaagtgattagtagagtatcgtatccatagagactgtcgtttcgtccaaacaatccacgttactta 34497210  T
Q  231 tttttagttgacgatataaaataaaagagtt-aagggttagaga 273  Q
    |||| | |||||||||||||||||||||||| ||||||||||||    
T  34497211 ttttaaattgacgatataaaataaaagagttaaagggttagaga 34497254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 14528145 - 14528287
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||  ||||||||| ||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||| ||  ||| ||||||||    
T  14528145 ttaggcaagtgtgccaaatcgtttaccaagtaataaagtgatacgtagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgttactta 14528244  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| |  |||||||||||||||||| ||||||||||||||||    
T  14528245 ttttaaactgacgatataaaataaaatagttaagggttagaga 14528287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 30806600 - 30806453
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca-----cagggattgtcgtttcgtccaagcacttcatgtt 225  Q
    ||||||||||||||||||||||| |  ||||||||||||||||||||||||||| ||||||     || ||||||||||||| ||||| || ||   |||    
T  30806600 ttaggcaagtgtatcaaatcgtttattaagtaataaagtgataagtagagtatcgtatccagtccacaaggattgtcgtttcatccaaacaatttgcgtt 30806501  T
Q  226 acttatttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||||||||   ||||||||||||||||||||||||||||||||||||    
T  30806500 acttattttagtttgacgatataaaataaaagagttaagggttagaga 30806453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 19786727 - 19786869
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| ||||| || ||||||||| ||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||||||||| ||  || ||||||||     
T  19786727 ttagacaagtataccaaatcgtttaccaagtaataaagtgacaagtaaagtatcatatccatagggactgtcgtttcgtccaaacaactcgtgttacttg 19786826  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| |||||| ||||||||||||||||| |||  ||||||||    
T  19786827 ttttaagttgatgatataaaataaaagagataaaagttagaga 19786869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 121 - 251
Target Start/End: Complemental strand, 24114396 - 24114262
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| ||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| ||  |    
T  24114396 tgatgtgcggattaggcaagtgtaccaaattgtttaccaagtaataaaatgataagtagagtatcgtatccgcagggattgtcgtttcgtccaaacaact 24114297  T
Q  220 catgttacttattttt---agttgacgatataaaa 251  Q
       |||||||||||||   ||||||||||||||||    
T  24114296 tgcgttacttatttttgtaagttgacgatataaaa 24114262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 153 - 383
Target Start/End: Complemental strand, 25182509 - 25182284
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaat 252  Q
    ||||||| ||||||||||| |||||||||||| ||| |||| |||||||| ||||||| || |   |   |||||||||||| |||||||||||||||||    
T  25182509 ttaccaaataataaagtgacaagtagagtatcgtattcacatggattgtcatttcgtctaaactgcttgcgttacttattttaagttgacgatataaaat 25182410  T
Q  253 aaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggat 352  Q
    ||||||| |||||||||||||              ||||||||| || ||||||||||||||||||||||||||||||||| || ||  | ||||||||     
T  25182409 aaaagagataagggttagaga---ttgcaatttttatctatttgcaacagagcaagttacctgtttttggttgcagaaaaggaaaca--gtggttaggac 25182315  T
Q  353 tcttcgaatccctcctatttatattgttgga 383  Q
    |||| ||||||| | ||||||  ||||||||    
T  25182314 tctttgaatcccccatatttactttgttgga 25182284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 29382464 - 29382360
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| || ||   ||||||||    
T  29382464 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttactta 29382365  T
Q  231 ttttt 235  Q
    |||||    
T  29382364 ttttt 29382360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 133 - 233
Target Start/End: Original strand, 24904630 - 24904731
Alignment:
Q  133 taggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttat 231  Q
    |||||||||||| |||||| || ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| || || ||||  ||||||||    
T  24904630 taggcaagtgtaccaaatcatttaccaaataataaagtgataagtagagtatcatatccacagtgattgtcgtttcgtctaaacaattcacattacttat 24904729  T
Q  232 tt 233  Q
    ||    
T  24904730 tt 24904731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 17101990 - 17101914
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||| |||||    
T  17101990 aagtgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccatagggattgtcgtttcatccaa 17101914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 24269767 - 24269839
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||| ||||||||||||||    
T  24269767 ttacctgtttttggttgcagaaaagtaagca--gcggttaggattcttcgaatcccccctgtttatattgttgga 24269839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 123 - 235
Target Start/End: Original strand, 24269585 - 24269697
Alignment:
Q  123 atgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttca 221  Q
    |||||| | ||||||||||||| |||||  || |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| || ||||    
T  24269585 atgtgcagattaggcaagtgtaccaaattatttaccaagtaataaagtg-taagtagagtatcgtatccacagggattgtcgtttcgtccaaacaattca 24269683  T
Q  222 tgttacttattttt 235  Q
      ||| ||||||||    
T  24269684 cattatttattttt 24269697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 146 - 251
Target Start/End: Original strand, 27659455 - 27659564
Alignment:
Q  146 caaatcgttacc-aagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt---agttga 241  Q
    |||||||||| | ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||| || | |  |||||||||||||   ||||||    
T  27659455 caaatcgttagcgaagtaataaagtgataagtagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttatttttgtaagttga 27659554  T
Q  242 cgatataaaa 251  Q
    ||||||||||    
T  27659555 cgatataaaa 27659564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 17509266 - 17509347
Alignment:
Q  155 accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||| || |||   |||||||||||||    
T  17509266 accaagtaataaagtgataagtagagtatcatatccacatggattgttctttcgtccaaacaattctctttacttattttta 17509347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 13315105 - 13314975
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| ||||| ||||||| || ||| || ||||||||||||||||||||||| |||||| |||||||| ||||| | ||||||||||| || ||    
T  13315105 tgatgtgcggattagg-aagtgtaccagatcatttaccaagtaataaagtgataagtatagtatcgtatccacatggatttttgtttcgtccaaacaatt 13315007  T
Q  220 catgttacttattt--ttagttgacgatataa 249  Q
    |  |||||||||||  | ||||||||||||||    
T  13315006 cgcgttacttattttataagttgacgatataa 13314975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 173 - 273
Target Start/End: Original strand, 13697893 - 13697993
Alignment:
Q  173 aagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaagagttaagggttagag 272  Q
    |||||||||||| |||||||| ||||| ||||||||||||| ||      |||||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  13697893 aagtagagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttacttattttaagttgacgatataaaatacaagagataagggttagag 13697992  T
Q  273 a 273  Q
    |    
T  13697993 a 13697993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 18448491 - 18448398
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || ||||||||||||||||||||||||||| |||||||||||   |||||| ||||||| | ||||||||||| ||||||||||||    
T  18448491 atctgtttgcaacagagcaagttacctgtttttggttgcataaaagtaagca--acggttatgattctttgtatccctcctatatatattgttgga 18448398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 148 - 271
Target Start/End: Original strand, 21314636 - 21314757
Alignment:
Q  148 aatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatat 247  Q
    |||| |||||||||||||||||||||||||| ||||| |||| ||||||||| ||||||||| ||| || | |  |||||||||||||||||  | ||||    
T  21314636 aatcattaccaagtaataaagtgataagtagtgtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttatttttagttaccaatat 21314735  T
Q  248 aaaataaaagagttaagggttaga 271  Q
      |||| ||||||||| |||||||    
T  21314736 --aatagaagagttaaaggttaga 21314757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 2637603 - 2637673
Alignment:
Q  141 tgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    |||||||||| ||| | |||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  2637603 tgtatcaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacatggattgtcgtttcgtc 2637673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 5850937 - 5851039
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| |||||||| | ||||||| |||||||||||||||||||||||||||||| ||||||||  ||||||||||||  |||| || | | |||||||||    
T  5850937 ttagtcaagtgtacctaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcgtttcaaccaaacaatccgtgttactta 5851036  T
Q  231 ttt 233  Q
    |||    
T  5851037 ttt 5851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 137 - 207
Target Start/End: Complemental strand, 26615339 - 26615269
Alignment:
Q  137 caagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||  |||||| | | |||||||||||    
T  26615339 caagtgtatcaaatcgttaccaactaataaagtgataagtagagtattgtatccatatgaattgtcgtttc 26615269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 15238795 - 15238896
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||||||||| ||| ||||||||| ||| ||||||||||| |||| |||||||| | |||||||||||||| || || |||  ||||||||    
T  15238795 ttaggcaagtgtatcaaattgtttaccaagtaagaaaatgataagtagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttactta 15238894  T
Q  231 tt 232  Q
    ||    
T  15238895 tt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 193
Target Start/End: Complemental strand, 24110769 - 24110696
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 193  Q
    |||||||||| ||| |||||||||||||||| || ||||||||||||| |||||||||||||||| ||||||||    
T  24110769 tgatgtgcggattatgcaagtgtatcaaatcatttaccaagtaataaaatgataagtagagtatcgtatccaca 24110696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 13314920 - 13314850
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||||||||||||||||||||||   |||||| ||||||||||||||  ||||||||||||||||||    
T  13314920 ttacctgtttttggttgcagaaaagtaagca--acggttaagattcttcgaatcc--cctatttatattgttgga 13314850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 6884954 - 6885035
Alignment:
Q  132 ttaggcaagtgtatcaaatcgt-taccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||||||  ||||||| |||| |||||||||||||||||| ||||||| |||| ||| |||||||||||||||||||    
T  6884954 ttaggcaagtgtactaaatcgtgtacccagtaataaagtgataagt-gagtatcgtatctacatggattgtcgtttcgtccaa 6885035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 30122257 - 30122176
Alignment:
Q  132 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||| ||||||  || ||||||||||||||| |||||||||||||||||||||| |||||||| ||| ||||||    
T  30122257 ttaggcaagtgtaccaaatcactttccaagtaataaagtg-taagtagagtatcatatccacatggattgtcattttgtccaa 30122176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 328 - 383
Target Start/End: Complemental strand, 24114193 - 24114140
Alignment:
Q  328 gaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  24114193 gaaaagtaagcagcg--gttaggattcttcgaatcccccctatttatattgttgga 24114140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 131 - 202
Target Start/End: Original strand, 26008018 - 26008090
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtc 202  Q
    |||||||||||||| |||||| || |||||||||||||||||||||||||||||  |||| | ||||||||||    
T  26008018 tttaggcaagtgtaccaaatcatttaccaagtaataaagtgataagtagagtatggtatcaagagggattgtc 26008090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 380
Target Start/End: Complemental strand, 26394619 - 26394559
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgtt 380  Q
    |||||||||||||||||||||||   |||||||||||||||||||||| |||||||||||||||    
T  26394619 ttttggttgcagaaaagtaagca--acggttaggattcttcgaatccc-cctatttatattgtt 26394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 17976615 - 17976694
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    ||||||||||||  |||||| || | |||||||||||||||||||||||||||| ||||||||  |||| ||||||||||    
T  17976615 ttaggcaagtgtgccaaatcatttatcaagtaataaagtgataagtagagtatcgtatccacaaagattttcgtttcgtc 17976694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 251
Target Start/End: Complemental strand, 18448623 - 18448522
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt---agttgacgatataa 249  Q
    ||||||||||||||||| |||| ||||| ||| |||| | || ||||||||||| |||||| || |||  |||||||||||||   ||||||||||||||    
T  18448623 ttaccaagtaataaagtaataattagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttatttttataagttgacgatataa 18448524  T
Q  250 aa 251  Q
    ||    
T  18448523 aa 18448522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 24110590 - 24110526
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||||||||||||||| |  ||||||||| |||||||||| ||| ||||||||||||||    
T  24110590 ttttggttgcagaaaagtaagcaggg--gttaggattattcgaatcccccctgtttatattgttgga 24110526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 141 - 203
Target Start/End: Complemental strand, 30783835 - 30783772
Alignment:
Q  141 tgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcg 203  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||||||    
T  30783835 tgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacatagattgtcg 30783772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 14075612 - 14075666
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  14075612 ttaccaagtaagaaagtgataagtagactatcgtatccacatggattgtcgtttc 14075666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 28276860 - 28276779
Alignment:
Q  132 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||| ||||||| |||||| ||||||| | |||| ||||||    
T  28276860 ttaggcaagtgtatcaaatcgtttaccaaataaaaaagtgataagt-gagtatcgtatccatagggattatagttttgtccaa 28276779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 31288353 - 31288429
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||| ||||||| ||||||||| |||||||||||||||| |||||| |||||| |||||| |||||||||| ||||    
T  31288353 tttaggaaagtgtaccaaatcgtttaccaagtaataaagtg-taagtaaagtatcgtatccatagggattgtcttttc 31288429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 44011104 - 44011048
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    |||| ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  44011104 ttacgaagtaataaagtg-taagtagagtatcgtatccacatggattgtcgtttcgtc 44011048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 193
Target Start/End: Original strand, 14006090 - 14006153
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 193  Q
    |||||| |||||||||| ||| || ||||||||||||| |||||||||||||||||||| ||||    
T  14006090 tttaggtaagtgtatcatatcatttaccaagtaataaaatgataagtagagtatcatattcaca 14006153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Complemental strand, 23893278 - 23893200
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||| |||||||||||||||||||||||| |||  ||||||  ||| |||| | || ||| ||||||||||||||    
T  23893278 caagtaatgaagtgataagtagagtatcatatcaacatagattgttcttttgtccgaacaattcttgttacttattttt 23893200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 340
Target Start/End: Original strand, 24645008 - 24645042
Alignment:
Q  306 aagttacctgtttttggttgcagaaaagtaagcag 340  Q
    |||||||||||||||||||||||||||||||||||    
T  24645008 aagttacctgtttttggttgcagaaaagtaagcag 24645042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 271
Target Start/End: Complemental strand, 26394697 - 26394646
Alignment:
Q  219 tcatgttacttattttta-gttgacgatataaaataaaagagttaagggttaga 271  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||    
T  26394697 tcatgttacttatttttaagttgacgatataa--taaaagagttaagggttaga 26394646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 336
Target Start/End: Original strand, 6885107 - 6885155
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaa 336  Q
    |||| |||| ||||||| |||||||||||||||||||||||||| ||||    
T  6885107 atctgtttgtaatagagtaagttacctgtttttggttgcagaaatgtaa 6885155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 16403952 - 16404012
Alignment:
Q  175 gtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||| |||||||| |||||||| |||||||| | || ||| ||||||||||||||    
T  16403952 gtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattttt 16404012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 17972171 - 17972237
Alignment:
Q  135 ggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtc 202  Q
    |||||| ||| |||||| ||| |||||||||||||| ||||||||||||| ||||| || ||||||||    
T  17972171 ggcaagcgtaccaaatcattatcaagtaataaagtg-taagtagagtatcgtatccgcatggattgtc 17972237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 27659584 - 27659639
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcg 342  Q
    ||||||||| || |||||||||| |||||||||| ||||||||||| |||||||||    
T  27659584 atctatttgcaaaagagcaagtttacctgttttttgttgcagaaaattaagcagcg 27659639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 5053024 - 5052962
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 193  Q
    ||||||||||||| ||||||||| |||  ||||||||||| ||||||||||||  ||||||||    
T  5053024 ttaggcaagtgtaccaaatcgtttaccgggtaataaagtgctaagtagagtattgtatccaca 5052962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 7983760 - 7983822
Alignment:
Q  318 tttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||||||||   ||| |||||||||| ||||||| ||||||||| ||||||||    
T  7983760 tttggttgcagaaaagtaagca--acgggtaggattctttgaatccc-cctatttattttgttgga 7983822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 193
Target Start/End: Complemental strand, 24723520 - 24723482
Alignment:
Q  155 accaagtaataaagtgataagtagagtatcatatccaca 193  Q
    ||||||||||||||||||||||| |||||| ||||||||    
T  24723520 accaagtaataaagtgataagtaaagtatcgtatccaca 24723482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 28317432 - 28317485
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||||||| |||||||||||||||||| ||| | ||||| |||||    
T  28317432 ttaccaagtaataaagtg-taagtagagtatcatatcaacatgtattgttgtttc 28317485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 30235373 - 30235419
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagta 177  Q
    |||||||||||||  |||||||| |||||||||||||||||||||||    
T  30235373 ttaggcaagtgtacaaaatcgtttaccaagtaataaagtgataagta 30235419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Complemental strand, 3739324 - 3739295
Alignment:
Q  58 gttattttctttatatatagtatagatata 87  Q
    ||||||||||||||||||||||||||||||    
T  3739324 gttattttctttatatatagtatagatata 3739295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 340
Target Start/End: Original strand, 13698005 - 13698055
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcag 340  Q
    |||| |||| || ||||||||||||||||||  ||||||||||||||||||||    
T  13698005 atctctttgcaacagagcaagttacctgttt--ggttgcagaaaagtaagcag 13698055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 17101855 - 17101762
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||| ||||||||||| ||||| |||||||||||  | ||||||||||| || |||||| | | ||||||||||||||    
T  17101855 atctgtttgcaacagagcaagtttacctgtttttgattgcaaaaaagtaagca--gtggttaggattcatcaaatccc-catgtttatattgttgga 17101762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 24644856 - 24644908
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgttt 206  Q
    |||||||||||||||||| ||||||||||||  |||||||| ||||| ||||||    
T  24644856 ttaccaagtaataaagtg-taagtagagtattgtatccacatggattatcgttt 24644908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 213
Target Start/End: Original strand, 25226137 - 25226214
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||  |||||||| | |||||||||||||||||||| ||||||| |||  ||||||||| | ||||| |||||    
T  25226137 caagtgtactaaatcgtttatcaagtaataaagtgataagttgagtatcgtatatacagggattattgtttcctccaa 25226214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 56 - 89
Target Start/End: Complemental strand, 43921967 - 43921934
Alignment:
Q  56 gggttattttctttatatatagtatagatataaa 89  Q
    ||||| ||||||||||||||||||||||||||||    
T  43921967 gggttgttttctttatatatagtatagatataaa 43921934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 87
Target Start/End: Complemental strand, 1170286 - 1170258
Alignment:
Q  59 ttattttctttatatatagtatagatata 87  Q
    |||||||||||||||||||||||||||||    
T  1170286 ttattttctttatatatagtatagatata 1170258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 341
Target Start/End: Original strand, 14626200 - 14626232
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagc 341  Q
    |||||| ||||||||||||||||||||||||||    
T  14626200 ttacctttttttggttgcagaaaagtaagcagc 14626232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 16404079 - 16404124
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||| ||||||||| |||||||||  ||||||||||||||||||||    
T  16404079 ttttggctgcagaaaaataagcagcg--gttaggattcttcgaatccc 16404124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 357
Target Start/End: Complemental strand, 29382288 - 29382243
Alignment:
Q  310 tacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttc 357  Q
    ||||| ||||||||||||||||||||||||  | ||||||||||||||    
T  29382288 tacctatttttggttgcagaaaagtaagca--gtggttaggattcttc 29382243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 360
Target Start/End: Complemental strand, 44010956 - 44010903
Alignment:
Q  305 caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaa 360  Q
    |||||||| ||||||||||||||||| |||||| |  ||||||| |||||||||||    
T  44010956 caagttacatgtttttggttgcagaagagtaagta--gcggttaagattcttcgaa 44010903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 119 - 273
Target Start/End: Original strand, 17671985 - 17672140
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcac 217  Q
    |||||||  ||| ||||||||||||| ||||||||| |||||||||||||||||||||||||||||  |||||||| ||||||| |||||||| || ||     
T  17671985 actgatggccggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacatggattgttgtttcgtctaaacaa 17672084  T
Q  218 ttcatgttacttatttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
     ||  |||||||||||| |||| ||||||||||||||||||||||| |||||||||    
T  17672085 ctcgcgttacttattttaagttaacgatataaaataaaagagttaaaggttagaga 17672140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 383
Target Start/End: Original strand, 14648891 - 14649136
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||| || ||  |  || |||||||||    
T  14648891 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg-attgtcgtttcttctaaatagctcgtgttactta 14648989  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaa 330  Q
    |||| |||||||||||||||||||||||  |||||||||||||              |||| |||| || |||||||||||| |||||||||||| ||||    
T  14648990 ttttaagttgacgatataaaataaaagacataagggttagagatttcaattttt---atctgtttgcaacagagcaagttacttgtttttggttgtagaa 14649086  T
Q  331 aagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||| || ||   ||||||||| |||| ||||||| ||| ||||||||||||||    
T  14649087 aaggaaaca--acggttaggactctttgaatccc-cctgtttatattgttgga 14649136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 12578380 - 12578227
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    ||||||| || ||||||||||||| |||||| || ||||| |||||||||||||| ||||||||| |||||||| |||||||||||| |||||| || ||    
T  12578380 tgatgtgaggattaggcaagtgtaccaaatcatttaccaaataataaagtgataattagagtatcgtatccacatggattgtcgttttgtccaaacaatt 12578281  T
Q  220 catgttacttatttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
       ||| |||||||| ||||||||||||||||||||||||| ||||||||||||    
T  12578280 tgcgtttcttattttaagttgacgatataaaataaaagagtaaagggttagaga 12578227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 121 - 273
Target Start/End: Complemental strand, 19636699 - 19636548
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttc 220  Q
    |||||||||  ||| | ||||||| ||||||||||| ||||||||||||| ||||||||||||  |||| | ||||||||||||||| ||||| || |||    
T  19636699 tgatgtgcgaattaagaaagtgtaccaaatcgttacaaagtaataaagtggtaagtagagtattgtatctatagggattgtcgtttcatccaaacaattc 19636600  T
Q  221 atgttacttatttttag-ttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||||||||||||| || ||||||  ||||||||||||||||||||||||||||    
T  19636599 atgttacttattttaagtttgacg--ataaaataaaagagttaagggttagaga 19636548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 13692772 - 13692668
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| || ||| |||||||||    
T  13692772 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttactta 13692673  T
Q  231 ttttt 235  Q
    |||||    
T  13692672 ttttt 13692668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 132 - 271
Target Start/End: Original strand, 5679201 - 5679341
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| |||||||| ||||||||| |||||||||||||||||| ||||||||||| |||| ||| | | | | ||||||||||| || |||  ||||||||    
T  5679201 ttagacaagtgtaccaaatcgtttaccaagtaataaagtgattagtagagtatcgtatctacatgaacttttgtttcgtccaaacaattcgcgttactta 5679300  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttaga 271  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  5679301 ttttaagttaacgatataaaataaaagagttaagggttaga 5679341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 13908854 - 13908954
Alignment:
Q  136 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttt 234  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||| |||||||||||||    
T  13908854 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttatttt 13908953  T
Q  235 t 235  Q
    |    
T  13908954 t 13908954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 119 - 383
Target Start/End: Complemental strand, 24639569 - 24639318
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcact 218  Q
    |||||||||| | ||||  |||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||| |||||| || |    
T  24639569 actgatgtgctgattagagaagtgtatcaaatcattaccaagtaataaagtgataagtagagtatcgtatccacatggattttcgttttgtccaaacaat 24639470  T
Q  219 tcatgttacttatttttagttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaag-ttacctgtt 317  Q
    |  ||| ||    ||||||||||||||||  ||||||| ||| ||||||||||||              || | |||| || |||||||| |||||||||    
T  24639469 t--tgtaac----ttttagttgacgatat--aataaaatagtaaagggttagaga---tttgtaattttatttgtttgcaacagagcaagtttacctgtt 24639381  T
Q  318 tttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    || |||||||||||||||||||  | ||||||||||||| |||||||| |||||||||||||||||    
T  24639380 ttcggttgcagaaaagtaagca--gtggttaggattctttgaatccct-ctatttatattgttgga 24639318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 132 - 262
Target Start/End: Original strand, 11490528 - 11490659
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||| ||||||| ||||| ||| | |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || |||  ||||||||    
T  11490528 ttaggaaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttactta 11490627  T
Q  231 tttttagttgacgatataaaataaaagagtta 262  Q
    ||||   |||||||||||||||||||||||||    
T  11490628 ttttagtttgacgatataaaataaaagagtta 11490659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 19092291 - 19092433
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||| ||| | ||||||||||||||||||| ||||||||  || |||| ||||||||||||||||||| ||  ||| ||| ||||    
T  19092291 ttaggcaagtgtaccaaattgtttatcaagtaataaagtgataagaagagtatcgcattcacatggattgtcgtttcgtccaaacaactcacgttgctta 19092390  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| |||||||||||| ||||||||||| |||| ||||||||    
T  19092391 ttttaagttgacgatattaaataaaagagataagagttagaga 19092433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 133 - 269
Target Start/End: Complemental strand, 19929777 - 19929640
Alignment:
Q  133 taggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttat 231  Q
    |||||||||||| |||||| || ||||||||| |||||||||| ||||||||| |||||||| |||||||||||||||| ||  |   | ||||||||||    
T  19929777 taggcaagtgtaccaaatcatttaccaagtaacaaagtgataaatagagtatcgtatccacatggattgtcgtttcgtctaaatagcccgtgttacttat 19929678  T
Q  232 ttttagttgacgatataaaataaaagagttaagggtta 269  Q
    ||| ||||||| |||||||||||||||| |||||||||    
T  19929677 tttaagttgacaatataaaataaaagagataagggtta 19929640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 146 - 383
Target Start/End: Complemental strand, 17337223 - 17336991
Alignment:
Q  146 caaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgat 245  Q
    |||||| ||||| |||||||| ||||||||||||||||| |||||| || ||||||| |||||||||| || ||   |||||||||||||||||||||||    
T  17337223 caaatcattaccgagtaataacgtgataagtagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttatttttagttgacgat 17337124  T
Q  246 ataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaag-ttacctgtttttggttgcagaaaagtaagcagcgcg 344  Q
    ||  ||||||||||| ||||||| ||||              |||| |||  || |||||||| ||||||||||||||||||| |||||||||||  | |    
T  17337123 at--aataaaagagtaaagggtttgaga--tttgcaatttttatctgtttacaacagagcaagtttacctgtttttggttgcataaaagtaagca--gag 17337030  T
Q  345 gttaggattcttcgaatccctcctatttatattgttgga 383  Q
     ||| ||||||||||||||| | ||||||||||| ||||    
T  17337029 attatgattcttcgaatcccccttatttatattgatgga 17336991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 133 - 273
Target Start/End: Complemental strand, 22176064 - 22175924
Alignment:
Q  133 taggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttat 231  Q
    |||||||||||| ||||||||| | |||||||||||||||||||||||||||  |||||| || ||||||| |||  ||||| || |||  || | ||||    
T  22176064 taggcaagtgtaccaaatcgtttatcaagtaataaagtgataagtagagtattgtatccatagagattgtcattttctccaaacaattcgcgtaa-ttat 22175966  T
Q  232 ttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    ||| |||||| |||||||||||||||||||||||||||||||    
T  22175965 tttgagttgatgatataaaataaaagagttaagggttagaga 22175924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 13128977 - 13128837
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||||||||||||  |||||| ||||||||||||||||||||| ||  ||  ||||||||    
T  13128977 ttaggcaagtgtaccaaatcgtttaccaagtaataaaatgataagtagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttactta 13128878  T
Q  231 t--ttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |  ||||||||||| ||||  |||||||||  |||||||||||||    
T  13128877 tttttttagttgaccatat--aataaaaga--taagggttagaga 13128837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 17951399 - 17951257
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| |||||||| ||||||||| |||||||| |||||||||||||| |||||| ||||||  ||  ||||||||||||| ||  |  ||  ||||||||    
T  17951399 ttagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtctaactagctcgcgttactta 17951300  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| ||||||||||||||||||||||||| | ||||||||||    
T  17951299 ttttaagttgacgatataaaataaaagagtgacgggttagaga 17951257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 17955251 - 17955109
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| |||||||| ||||||||| |||||||| |||||||||||||| |||||| ||||||  ||  ||||||||||||| ||  |  ||  ||||||||    
T  17955251 ttagacaagtgtaccaaatcgtttaccaagtactaaagtgataagtaaagtatcgtatccattggatttgtcgtttcgtctaactagctcgcgttactta 17955152  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| ||||||||||||||||||||||||| | ||||||||||    
T  17955151 ttttaagttgacgatataaaataaaagagtgatgggttagaga 17955109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 135 - 231
Target Start/End: Original strand, 17216816 - 17216913
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttat 231  Q
    ||||| |||| ||||||||| |||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| || |||  |||||||||    
T  17216816 ggcaaatgtaccaaatcgtttaccaagcaataaagtgataagtagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttat 17216913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 20315000 - 20315098
Alignment:
Q  136 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    ||||||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||| || ||   |||||||||||    
T  20315000 gcaagtgtaccaaatcgtttaccaagtaataaattgataagtagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 121 - 272
Target Start/End: Original strand, 40227762 - 40227911
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttc 220  Q
    ||||||| || ||||||||||||| |||||||||||||||||||||||||||||||  | |||  |||||| ||| ||||| ||||| ||||| || |||    
T  40227762 tgatgtgaggattaggcaagtgtaccaaatcgttaccaagtaataaagtgataagt-taatattgtatccataggaattgtagtttcatccaaacaattc 40227860  T
Q  221 atgttacttatttttag-ttgacgatataaaataaaagagttaagggttagag 272  Q
      ||||||||||||||| ||||||  |||| |||||||||| ||||| |||||    
T  40227861 gcgttacttatttttagtttgacg--ataatataaaagagtaaagggctagag 40227911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 7582315 - 7582375
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  7582315 ttaccaagtaataaagtgataagtagagtatcatatccacatggattgttgtttcgtccaa 7582375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 120 - 231
Target Start/End: Complemental strand, 13992991 - 13992879
Alignment:
Q  120 ctgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcact 218  Q
    ||||||||||| | ||| ||||||| ||||| ||| |||||||||||||||| ||||||||||||| |||||||| ||||| |||||| |||||| || |    
T  13992991 ctgatgtgcggatgaggtaagtgtaccaaattgtttaccaagtaataaagtggtaagtagagtatcgtatccacatggattttcgttttgtccaaacaat 13992892  T
Q  219 tcatgttacttat 231  Q
    || ||||||||||    
T  13992891 tcgtgttacttat 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 19492798 - 19492699
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||| ||||||||| |||||||||||||| ||||||||||||||| |||||||| | ||||||||||| ||||| || |||  |||||||||||||    
T  19492798 caagtgtaccaaatcgtttaccaagtaataaagggataagtagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttattttt 19492699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 19882636 - 19882738
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||||||||  |||||||| | |||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||| || |||  ||||||||    
T  19882636 ttaggcaagtgtacaaaatcgtttatcaagtaataaagtgattagtagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgttactta 19882735  T
Q  231 ttt 233  Q
    |||    
T  19882736 ttt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 153 - 273
Target Start/End: Complemental strand, 22357616 - 22357493
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagta---tcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataa 249  Q
    ||||||||||||||||||||||||| ||||   || |||||||| ||||||||||||| |  || || ||| ||||||||||||  ||||||||||||||    
T  22357616 ttaccaagtaataaagtgataagtaaagtactatcgtatccacatggattgtcgtttcatttaaacagttcgtgttacttatttaaagttgacgatataa 22357517  T
Q  250 aataaaagagttaagggttagaga 273  Q
    || | ||||| |||| ||||||||    
T  22357516 aaaataagagataagagttagaga 22357493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 21323978 - 21323874
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||||||||  |||||||| ||||| |||||| ||||| ||||||||||| ||||||||  |||||||||||||||||| || |||  ||||||||    
T  21323978 ttaggcaagtgtactaaatcgtttaccaaataataatgtgatcagtagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgttactta 21323879  T
Q  231 ttttt 235  Q
    |||||    
T  21323878 ttttt 21323874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 19492640 - 19492568
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| ||||||||||||||||||||||||| |||  |||||||||||||||||||| ||| ||||||||||||||    
T  19492640 ttacatgtttttggttgcagaaaagtaagcggcg--gttaggattcttcgaatcccccctgtttatattgttgga 19492568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 235
Target Start/End: Complemental strand, 19562292 - 19562177
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||| ||| ||||||||| |||||| || ||||||||||||||||||||||| |||||| | |||||| | ||||||||||| ||||| || ||    
T  19562292 tgatgtgcggattaagcaagtgtaccaaatcatttaccaagtaataaagtgataagtaaagtatcgtgtccacaagtattgtcgtttcatccaaacaatt 19562193  T
Q  220 catgttacttattttt 235  Q
      | ||||||||||||    
T  19562192 tgtattacttattttt 19562177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 138 - 207
Target Start/End: Original strand, 11093966 - 11094036
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||||||||||||| ||||||||||||| ||||| ||||||| |||||||||||| ||||||||||||    
T  11093966 aagtgtatcaaatcgtttaccaagtaataaaatgataggtagagtgtcatatccacagagattgtcgtttc 11094036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 13909003 - 13909097
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||| ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||| | | ||||||||||||||    
T  13909003 atctgtttgcaacagagcaagtttacctgtttttggttgcaaaaaagtaagca--gcggttaggattctttgaatcccccttgtttatattgttgga 13909097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 137 - 235
Target Start/End: Original strand, 15164768 - 15164867
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||| ||||||||| |||||||||| || | ||||| |||||||| ||||||||||||||||| |||||||||| || ||   |||||||||||||    
T  15164768 caagtgtaccaaatcgtttaccaagtaatcaattaataagcagagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttattttt 15164867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 201
Target Start/End: Original strand, 17709757 - 17709823
Alignment:
Q  136 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgt 201  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||  |||||| |||||||||    
T  17709757 gcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccatagggattgt 17709823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 25121328 - 25121227
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||| ||||||  ||||||||| |||||||||||||||| |||||| |||||| |||||||| ||||||| ||||||||||| || |||  ||||||||    
T  25121328 ttaggaaagtgttccaaatcgtttaccaagtaataaagtg-taagtatagtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgttactta 25121230  T
Q  231 ttt 233  Q
    |||    
T  25121229 ttt 25121227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 7582446 - 7582540
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| |||||| |||||| |||||||||||||||||||||| ||||||  | ||||||||||||| |||||||  || ||||||||||||||    
T  7582446 atctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagca--gtggttaggattctttgaatcccctctgtttatattgttgga 7582540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 3774821 - 3774923
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggat--tgtcgtttcgtccaagcacttcatgttact 228  Q
    ||||||||||||||||||| ||| || |||||||||||||  ||||||||||||||||||||| | ||  ||||||||| ||||| || |||| ||||||    
T  3774821 ttaggcaagtgtatcaaattgtttactaagtaataaagtgc-aagtagagtatcatatccacatgaattgtgtcgtttcatccaaacaattcacgttact 3774919  T
Q  229 tatt 232  Q
    ||||    
T  3774920 tatt 3774923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 9737612 - 9737528
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgat-----aagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    ||||||||||||| ||||||||| ||||||||||||||||||     |||||||||||| |||||||| ||||||| ||||||||    
T  9737612 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgatcagtaaagtagagtatcgtatccacatggattgtagtttcgtc 9737528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 383
Target Start/End: Complemental strand, 13692618 - 13692537
Alignment:
Q  301 agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||| |||||||||||||||||||||||||||||  |  |||||||||||||||||||  ||| | ||||||||||||    
T  13692618 agagcaagtttacctgtttttggttgcagaaaagtaagca--gtagttaggattcttcgaatccgccctgtatatattgttgga 13692537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 17026272 - 17026219
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||||||||||    
T  17026272 ttacctgtttttggttgcagacaagtaagca--gcggttaggattcttcgaatccc 17026219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 205
Target Start/End: Original strand, 10589719 - 10589781
Alignment:
Q  142 gtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    |||||||||| |||||||||||||||||||||||| |||| || |||| |||||||||||||||    
T  10589719 gtatcaaatccttaccaagtaataaagtgataagt-gagtgtcgtatcaacagggattgtcgtt 10589781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 15047124 - 15047203
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    ||||| ||||||  ||||||||| |||||||||||||||||||||||||| ||| |||| ||| ||||| ||||||||||    
T  15047124 ttaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtc 15047203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 15107300 - 15107221
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    ||||| ||||||  ||||||||| |||||||||||||||||||||||||| ||| |||| ||| ||||| ||||||||||    
T  15107300 ttaggaaagtgttccaaatcgtttaccaagtaataaagtgataagtagaggatcgtatctacatggattttcgtttcgtc 15107221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 19900575 - 19900649
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    |||||||||||||| ||||| ||| |||||||||||||||| ||||||||||||||||| ||||  ||||||||||    
T  19900575 tttaggcaagtgtaccaaattgtttaccaagtaataaagtg-taagtagagtatcatattcacaaagattgtcgtt 19900649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 25094589 - 25094668
Alignment:
Q  157 caagtaataaagtga-taagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||| | |||||||||||||||||||||| |||||||  |||||||||| || ||| ||||||||| ||||    
T  25094589 caagtaataaagttagtaagtagagtatcatatccacatggattgttctttcgtccaaacaattcttgttacttaatttt 25094668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 138 - 207
Target Start/End: Complemental strand, 11521288 - 11521218
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||| ||||||||| | ||| |||||||||||||||||||||||| ||| |||| |||||||||||||    
T  11521288 aagtgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatacacatggattgtcgtttc 11521218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 19562125 - 19562050
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| |||| || |||||||||| |||||||||||||||||||||||||| ||  |||||||| ||||||||||||||    
T  19562125 atctctttgcaacagagcaagtttacctgtttttggttgcagaaaagtaatca--gcggttagaattcttcgaatccc 19562050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 20829841 - 20829764
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgt 209  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| | ||||||  |||||||| ||||||| |||||||    
T  20829841 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataact-gagtattgtatccacaaggattgttgtttcgt 20829764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 386
Target Start/End: Original strand, 11935237 - 11935303
Alignment:
Q  318 tttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttggagat 386  Q
    ||||||||||||||||||| ||| |  ||||||||||||||||||||  |||||||||| |||||||||    
T  11935237 tttggttgcagaaaagtaatcagtg--gttaggattcttcgaatcccctctatttatatcgttggagat 11935303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 293 - 364
Target Start/End: Complemental strand, 12406648 - 12406578
Alignment:
Q  293 tttgaaatagagc-aagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| |||||||| || |||||||||||||||||||| ||||||| ||  |||||||||||||||||||||||    
T  12406648 tttgcaatagagcgaatttacctgtttttggttgcaggaaagtaaaca--gcggttaggattcttcgaatccc 12406578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 25121175 - 25121102
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| |||| || ||||||||||||| ||||| | ||||||||||||||||||||  ||||||||||||||||||||    
T  25121175 atctgtttgcaacagagcaagttacccgtttt-gattgcagaaaagtaagcagcg--gttaggattcttcgaatccc 25121102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 8969802 - 8969707
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataa 249  Q
    |||| ||||||||||||| ||||||||| | | |||| || | |||||||||||||||||| || ||| |||||||||||||   ||||||||||||    
T  8969802 ttacaaagtaataaagtg-taagtagagcaacgtatctactgagattgtcgtttcgtccaaacaattcgtgttacttattttgttttgacgatataa 8969707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 9052657 - 9052772
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcac 217  Q
    |||||||  ||| ||||||||||||| |||||| || ||||||||||||| || ||||||||||||| ||||| ||  |||||| |||||  |||| ||     
T  9052657 actgatggtcggattaggcaagtgtaccaaatcatttaccaagtaataaaatg-taagtagagtatcgtatccgcaaagattgttgtttcaaccaaacaa 9052755  T
Q  218 ttcatgttacttatttt 234  Q
    |||| ||||||||||||    
T  9052756 ttcacgttacttatttt 9052772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 132 - 183
Target Start/End: Original strand, 12318429 - 12318481
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtta-ccaagtaataaagtgataagtagagtat 183  Q
    ||||||||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  12318429 ttaggcaagtgtaccaaatcattaaccaagtaataaagtgataagtagagtat 12318481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 10107006 - 10107080
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    |||||||||||||| ||||||||| ||||||||||||| ||  |||||||||||  |||||| |||||||||||||    
T  10107006 tttaggcaagtgtagcaaatcgtttaccaagtaataaattgc-aagtagagtattctatccatagggattgtcgtt 10107080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 11933415 - 11933517
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||  | ||||||| |||||||||| ||||||||||| ||||||| |  ||||| ||||||||||||||||||| ||  ||  ||||||||    
T  11933415 ttaggcaagtgttcctaatcgtttaccaagtaatgaagtgataagt-gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttactta 11933513  T
Q  231 tttt 234  Q
    ||||    
T  11933514 tttt 11933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 141 - 207
Target Start/End: Original strand, 22526369 - 22526436
Alignment:
Q  141 tgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||| ||||||||| | ||| |||||||||||||||||||||||| |||||||| | |||||||||||    
T  22526369 tgtaccaaatcgtttatcaaataataaagtgataagtagagtatcgtatccacatgaattgtcgtttc 22526436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 235
Target Start/End: Complemental strand, 16730468 - 16730398
Alignment:
Q  165 aaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||||||||||| |||||| | ||||| ||||||||||||| ||  ||  |||||||||||||    
T  16730468 aaagtgataagtagagtatcgtatccaaaaggattttcgtttcgtccaaacaactcgcgttacttattttt 16730398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 1833697 - 1833648
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtaga 179  Q
    |||||||||||  ||||||||||| |||||||||||||||||||||||||    
T  1833697 tttaggcaagtacatcaaatcgtttaccaagtaataaagtgataagtaga 1833648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 121 - 166
Target Start/End: Original strand, 11935176 - 11935221
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgttaccaagtaataa 166  Q
    |||||||||| |||||| |||||| |||||||||||||||||||||    
T  11935176 tgatgtgcggattaggctagtgtaccaaatcgttaccaagtaataa 11935221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 19374909 - 19374834
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||| ||||||||| | ||||||||||| || ||||||||||||| ||||||| | ||||||||||| ||||||    
T  19374909 aagtgtaccaaatcgtttatcaagtaataaaatg-taagtagagtatcgtatccactgagattgtcgttttgtccaa 19374834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 25097856 - 25097936
Alignment:
Q  157 caagtaataaagtga-taagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    ||||||||||||| | ||||||||||||| |||||||| |||||||  ||| |||| |  | |||||||||||||||||||    
T  25097856 caagtaataaagttagtaagtagagtatcgtatccacatggattgttcttttgtccgaaaaattcatgttacttattttta 25097936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 87
Target Start/End: Complemental strand, 20702139 - 20702108
Alignment:
Q  56 gggttattttctttatatatagtatagatata 87  Q
    ||||||||||||||||||||||||||||||||    
T  20702139 gggttattttctttatatatagtatagatata 20702108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 293 - 383
Target Start/End: Complemental strand, 22357476 - 22357388
Alignment:
Q  293 tttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| |||||||||| |||||||| ||||||||||| |||||   || |||||| | || ||||||| ||||||||| ||||||||    
T  22357476 tttgcaatatagcaagttacttgtttttgattgcagaaaaggaagca--tcgtttaggactttttgaatcccccctatttattttgttgga 22357388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 363
Target Start/End: Original strand, 25097992 - 25098044
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatcc 363  Q
    |||||||||||||||||  |||||||| |||  ||||||||||||||||||||||    
T  25097992 ttacctgtttttggttgttgaaaagtatgca--gcggttaggattcttcgaatcc 25098044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 893708 - 893646
Alignment:
Q  19 ttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtata 81  Q
    |||||||||||||||||| || ||||| | || ||| || ||||||||||||||| |||||||    
T  893708 ttggaaagagaaaaagttagctcaaaagagccgaaagggtttattttctttatatgtagtata 893646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Complemental strand, 11700672 - 11700610
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccaca 193  Q
    |||| |||||||| ||||| ||| ||||||||||||| |||||| ||||||||| ||||||||    
T  11700672 ttagacaagtgtaccaaattgtttaccaagtaataaaatgataaatagagtatcgtatccaca 11700610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 87
Target Start/End: Original strand, 35603423 - 35603453
Alignment:
Q  57 ggttattttctttatatatagtatagatata 87  Q
    |||||||||||||||||||||||||||||||    
T  35603423 ggttattttctttatatatagtatagatata 35603453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Complemental strand, 4609147 - 4609118
Alignment:
Q  58 gttattttctttatatatagtatagatata 87  Q
    ||||||||||||||||||||||||||||||    
T  4609147 gttattttctttatatatagtatagatata 4609118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 15050186 - 15050138
Alignment:
Q  131 tttaggcaagtgtatcaaatc-gttaccaagtaataaagtgataagtaga 179  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  15050186 tttaggcaagtgtatcaaatcatttaccaagtaataaagtg-taagtaga 15050138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Original strand, 15104238 - 15104286
Alignment:
Q  131 tttaggcaagtgtatcaaatc-gttaccaagtaataaagtgataagtaga 179  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  15104238 tttaggcaagtgtatcaaatcatttaccaagtaataaagtg-taagtaga 15104286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 210
Target Start/End: Complemental strand, 43941864 - 43941811
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    |||||||||||||||||||||  ||||| ||||||||  |||||| ||||||||    
T  43941864 caagtaataaagtgataagtaaggtatcctatccacatagattgttgtttcgtc 43941811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 83 - 115
Target Start/End: Complemental strand, 9828550 - 9828518
Alignment:
Q  83 atataaaggaccaagtttgattgaaaaaggtta 115  Q
    ||||||||||||||||||||||| |||||||||    
T  9828550 atataaaggaccaagtttgattgcaaaaggtta 9828518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 86
Target Start/End: Complemental strand, 10249110 - 10249082
Alignment:
Q  58 gttattttctttatatatagtatagatat 86  Q
    |||||||||||||||||||||||||||||    
T  10249110 gttattttctttatatatagtatagatat 10249082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 13787244 - 13787192
Alignment:
Q  128 cggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtaga 179  Q
    |||||||| |||||||||| ||| ||| || ||||||||||||||||||||||    
T  13787244 cggtttagacaagtgtatcgaatggtttactaagtaataaagtgataagtaga 13787192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 168401 - 168260
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||| || ||  |  || |||||||||    
T  168401 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacagg-attgtcgtttcttctaaatagctcgtgttactta 168303  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| |||||||||||||||||||||||  |||||||||||||    
T  168302 ttttaagttgacgatataaaataaaagacataagggttagaga 168260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 168248 - 168156
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||||| |||||||||||| ||||||| || ||   ||||||||| |||| ||||||| ||| ||||||||||||||    
T  168248 atctgtttgcaacagagcaagttacttgtttttggttgtagaaaaggaaaca--acggttaggactctttgaatccc-cctgtttatattgttgga 168156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 5e-35; HSPs: 82)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 121 - 383
Target Start/End: Complemental strand, 13345450 - 13345194
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    ||||||| || || |||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| || ||    
T  13345450 tgatgtgtggattgggcaagtgtaccaaattgtttaccaagtaataaagtgataagtagagtatcatatccacatggattgtcgttttgtccaaacaatt 13345351  T
Q  220 catgttacttatttttag-ttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgttt 318  Q
    |  ||||||||||| ||| ||||||  |||||||||||||||||| ||||| |||              |||||||| ||| | ||| ||||||||| ||    
T  13345350 cgcgttacttatttatagtttgacg--ataaaataaaagagttaaaggttaaaga--tttgcagtttttatctatttaaaacatagc-agttacctg-tt 13345257  T
Q  319 ttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||  |||||||||| ||  |||||||||||| |||||||||| ||||||||||||||||||    
T  13345256 ttggtttaagaaaagtaaaca--gcggttaggatttttcgaatcccccctatttatattgttgga 13345194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 119 - 273
Target Start/End: Original strand, 17359145 - 17359297
Alignment:
Q  119 actgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcac 217  Q
    |||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||| |  ||||||||||||||||||  |     
T  17359145 actgatgtgcggattaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagttgagtatcatatccataaagattgtcgtttcgtccaaataa 17359244  T
Q  218 ttcatgttacttattttta-gttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||  |||||||||||||| |||||||||||  |||||||||  |||||||||||||    
T  17359245 ttctcgttacttatttttaggttgacgatat--aataaaaga--taagggttagaga 17359297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 120 - 235
Target Start/End: Original strand, 21449073 - 21449189
Alignment:
Q  120 ctgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcact 218  Q
    ||||||||||| | ||||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| || |    
T  21449073 ctgatgtgcggatcaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacaaggattgtcgtttcggccaaacaat 21449172  T
Q  219 tcatgttacttattttt 235  Q
    | |||||||||||||||    
T  21449173 ttatgttacttattttt 21449189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 132 - 270
Target Start/End: Original strand, 22664202 - 22664341
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||| |||| ||||||||| |||||||||||||||||||||||||||||| ||||||| |||||| || ||||||| || ||  ||  ||| ||||    
T  22664202 ttaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcttatccactgggattttcatttcgtctaaacaactcgcgttgctta 22664301  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttag 270  Q
    |||| |||||||||||||||||||||||| ||||||||||    
T  22664302 ttttaagttgacgatataaaataaaagagataagggttag 22664341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 24281273 - 24281415
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||| ||||||  ||| | || ||   ||||||||    
T  24281273 ttaggcaaatgtaccaaatcgtttaccaagtaataaagtgataagtagattatcatatccacatggattatcgttttttccgaacaatttgcgttactta 24281372  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||    
T  24281373 ttttaagttgacaatataaaataaaagagtaaagggttagaga 24281415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 147627 - 147768
Alignment:
Q  132 ttaggcaagtgtatcaaatcgttac-caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| |||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||| |||||||| ||||||| || ||  ||  ||||||||    
T  147627 ttagacaagtgtatcaaatcgtttcacaagtaataaagtgataagtggagtatcatattcacatggattgtcatttcgtctaaacagctcgcgttactta 147726  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| | |||||||||| ||||||||||| |||||||||||||    
T  147727 ttttaatttgacgatat-aaataaaagagataagggttagaga 147768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 12208600 - 12208720
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    ||||||||||  |||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || |||  |||||||||||    
T  12208600 ggcaagtgtactaaatcgtttaccaagtaataaagtgataagtagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttattt 12208699  T
Q  234 tt---agttgacgatataaaa 251  Q
    ||   ||||||||||||||||    
T  12208700 ttgtaagttgacgatataaaa 12208720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 25405730 - 25405610
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||| || |||| |||||||||||    
T  25405730 ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtaaagtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttattt 25405631  T
Q  234 tt---agttgacgatataaaa 251  Q
    ||   ||||||||||||||||    
T  25405630 ttgtaagttgacgatataaaa 25405610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 17610354 - 17610255
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||||| |||||||| ||||||||||||||||||| || |||| |||||||||||||    
T  17610354 caagtgtaccaaatcgtttaccaagtaataaagttataagtagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttattttt 17610255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 15544066 - 15543946
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||| |  ||||||||||||||||| || ||| ||||||||||||    
T  15544066 ggcaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttattt 15543967  T
Q  234 tt---agttgacgatataaaa 251  Q
    ||   | ||||||||||||||    
T  15543966 ttttaatttgacgatataaaa 15543946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 140 - 273
Target Start/End: Original strand, 33190681 - 33190815
Alignment:
Q  140 gtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagt 238  Q
    ||||| ||||||||| | ||||||||||| ||||||||||||||| |||||||||   ||||||||||| || || ||  || ||||||||||||| |||    
T  33190681 gtgtaccaaatcgtttatcaagtaataaaatgataagtagagtataatatccacaacaattgtcgtttcatctaaacaactcgtgttacttattttaagt 33190780  T
Q  239 tgacgatataaaataaaagagttaagggttagaga 273  Q
    |||||||||||||||||| |||||||| |||||||    
T  33190781 tgacgatataaaataaaatagttaaggtttagaga 33190815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 14779564 - 14779684
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| |||||| || |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||  ||  |||| ||||||    
T  14779564 ggcaagtgtaccaaatcatttaccaagtaataatgtgataattagagtatcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttattt 14779663  T
Q  234 tt---agttgacgatataaaa 251  Q
    ||   ||||||||||||||||    
T  14779664 ttgtaagttgacgatataaaa 14779684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 155 - 251
Target Start/End: Complemental strand, 21666687 - 21666588
Alignment:
Q  155 accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt---agttgacgatataaaa 251  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||| || |||  |||||||||||||   ||||||||||||||||    
T  21666687 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttatttttataagttgacgatataaaa 21666588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 153 - 268
Target Start/End: Original strand, 24214562 - 24214677
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaat 252  Q
    ||||||||||||||||||||||||| ||||   |||||||| ||||||| |||||||| || ||  | | |||||||||||| ||| |||||||||||||    
T  24214562 ttaccaagtaataaagtgataagtacagtactgtatccacatggattgttgtttcgtctaaacaacttacgttacttattttaagtggacgatataaaat 24214661  T
Q  253 aaaagagttaagggtt 268  Q
    |||||| |||||||||    
T  24214662 aaaagaattaagggtt 24214677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 139 - 262
Target Start/End: Original strand, 16179010 - 16179137
Alignment:
Q  139 agtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt-- 235  Q
    |||||| ||||||||| | ||||||||||| |||||||||||||||| |||||| | |||  |||||||||||||| || ||| ||||||||||||||      
T  16179010 agtgtaccaaatcgtttaacaagtaataaactgataagtagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttttgt 16179109  T
Q  236 -agttgacgatataaaataaaagagtta 262  Q
     |||||||||||||||||| ||| ||||    
T  16179110 aagttgacgatataaaatataagggtta 16179137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 18736340 - 18736239
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| ||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| || ||   |||||||||||    
T  18736340 ggcaagtgtaccaaatcgtttaacaagtaataaagtgataagtagtgtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttattt 18736241  T
Q  234 tt 235  Q
    ||    
T  18736240 tt 18736239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 21847630 - 21847729
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |||||||||||||||  ||||||||||||  |||||||| ||||||||||||||||||| || |||| ||||||||    
T  21847630 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtc-taagtagagtattgtatccacatggattgtcgtttcgtccaaacaattcacgttactta 21847728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 132 - 239
Target Start/End: Complemental strand, 23038114 - 23038007
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| ||||||| |||||||| |||||||||||||||| || ||  ||  ||||||||    
T  23038114 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataagt-gagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttactta 23038016  T
Q  231 tttttagtt 239  Q
    |||| ||||    
T  23038015 ttttaagtt 23038007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 313 - 383
Target Start/End: Original strand, 21449252 - 21449320
Alignment:
Q  313 ctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||| |||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||    
T  21449252 ctgtttttggatgcagaaaagtaagcagcg--gttaggattcttcgaatccctcctgtttatattgttgga 21449320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 273
Target Start/End: Complemental strand, 9787982 - 9787840
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| |||||| || | |||||||||||||||||||||||||||| |||||| |   |||||||||||||| || ||  ||   |||||||    
T  9787982 ttaggcaagtgtaccaaatcatttagcaagtaataaagtgataagtagagtatcgtatccatataaattgtcgtttcgtctaaacaactccaattactta 9787883  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    |||| |||| | ||||||||||| |||||  ||||||||||||    
T  9787882 ttttaagtttatgatataaaatagaagagaaaagggttagaga 9787840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 233
Target Start/End: Original strand, 17837513 - 17837615
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||| ||| ||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||| || || |||  ||||||||    
T  17837513 ttaggcaagtgtaccaaattgtttaccaagtaataaagttataagtagagtatcatatccacaaggattgtcattttgtctaaacaattcgcgttactta 17837612  T
Q  231 ttt 233  Q
    |||    
T  17837613 ttt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 135 - 251
Target Start/End: Original strand, 29242518 - 29242638
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| ||||| ||| | |||||||||||||||||||||||||||| |||||| || |||||||||||| ||||| || |||  ||||| |||||    
T  29242518 ggcaagtgtaccaaattgtttatcaagtaataaagtgataagtagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatattt 29242617  T
Q  234 tt---agttgacgatataaaa 251  Q
    ||   ||||||||||||||||    
T  29242618 ttgtaagttgacgatataaaa 29242638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 374
Target Start/End: Original strand, 28008090 - 28008338
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||||  |||| ||| |||||||||||||| || |||||||||||| ||||| | |||||| ||| ||  || |||||||| |  |  |  || ||    
T  28008090 tgatgtgcgaattagacaaatgtatcaaatcgtttactaagtaataaagttataagaatagtatcgtattcattggaattgtcgtcttctttatacaatt 28008189  T
Q  220 catgttacttatttttagttgacgatataaaataaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttt 319  Q
    | ||||||||||||| ||||||||||||||||||||||||| |||| |||||||              |||| |||  |||||||||| |||| || |||    
T  28008190 cgtgttacttattttaagttgacgatataaaataaaagagtaaaggattagaga---ttgcaatttttatctgtttccaatagagcaaattacttg-ttt 28008285  T
Q  320 tggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat 374  Q
    ||||||||||||||||||||  ||||||||||||||| ||||| | |||||||||    
T  28008286 tggttgcagaaaagtaagca--gcggttaggattctttgaatctcccctatttat 28008338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 242
Target Start/End: Complemental strand, 15813639 - 15813516
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataa-gtagagtatcatatccacagggattgtcgtttcgtccaagcact 218  Q
    |||||||||| |||| |||||||| ||||||||| | |||  ||||||||||||| |||||||||  |||||||| ||||||||||||| |  || || |    
T  15813639 tgatgtgcggattagacaagtgtaccaaatcgtttatcaaaaaataaagtgataaagtagagtattgtatccacaaggattgtcgtttctttgaaacaat 15813540  T
Q  219 tcatgttacttatttttagttgac 242  Q
    || |||||||||||||||||||||    
T  15813539 tcgtgttacttatttttagttgac 15813516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 22620258 - 22620400
Alignment:
Q  132 ttaggcaagtgtatcaaat-cgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||||||||| | |||  ||||||||||||||||| ||||||||| |||||| ||| |||||| ||||||| ||  | |||| ||||||||    
T  22620258 ttaggcaagtgtatcaaattctttaaaaagtaataaagtgataactagagtatcgtatccataggaattgtcttttcgtctaaataattcacgttactta 22620357  T
Q  231 tttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    ||||||    |  | |||||||||| ||||| |||||||||||    
T  22620358 tttttaaacaataaaataaaataaaggagttgagggttagaga 22620400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 24306405 - 24306339
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattg 200  Q
    |||||||||| ||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  24306405 ggcaagtgtaccaagtcgtttaccaagtaataaagtgataagtagagtatcgtatccacagggattg 24306339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 301 - 380
Target Start/End: Complemental strand, 17610193 - 17610115
Alignment:
Q  301 agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgtt 380  Q
    |||||||||| |||||||||||||||||||||||||||||  ||||||||||||||| ||| ||| ||| |||||||||||    
T  17610193 agagcaagtttacctgtttttggttgcagaaaagtaagca--gcggttaggattctttgaaacccccctttttatattgtt 17610115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 21334652 - 21334574
Alignment:
Q  303 agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||| |||||||||| |||||||||| |||||  |||||||||||||||||||| ||| | ||||||||||||    
T  21334652 agcaagttacctatttttggttgaagaaaagtaaacagcg--gttaggattcttcgaatcccccctgtctatattgttgga 21334574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 235
Target Start/End: Complemental strand, 21988082 - 21987981
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| |||||| || ||||| |||||||||||||||||||||||| ||||| | | ||||||| |||||||||| || |||  |||||||||||    
T  21988082 ggcaagtgtaccaaatcctttaccaaataataaagtgataagtagagtatcgtatcctcggagattgtcatttcgtccaatcaattcgcgttacttattt 21987983  T
Q  234 tt 235  Q
    ||    
T  21987982 tt 21987981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 155 - 235
Target Start/End: Complemental strand, 16069630 - 16069550
Alignment:
Q  155 accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||||||||||||   | || ||| ||||||||||||||    
T  16069630 accaagtaataaagtgataagtaaaatatcatatacacagggattgtcgtttcgtttgaacaattcttgttacttattttt 16069550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 160 - 263
Target Start/End: Complemental strand, 51473950 - 51473849
Alignment:
Q  160 gtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaagag 259  Q
    ||||||||||||||||||||||||| |||||| | |||||||||||| |||||| || ||   ||||||| |||||||| |||   ||||||||||||||    
T  51473950 gtaataaagtgataagtagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttacttgtttttagtcgac--aataaaataaaagag 51473853  T
Q  260 ttaa 263  Q
    ||||    
T  51473852 ttaa 51473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 132 - 206
Target Start/End: Complemental strand, 12012903 - 12012828
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgttt 206  Q
    ||||||||||||||||||||||| | |||||| ||||||||||||||||||||  |||||||| | ||||||||||    
T  12012903 ttaggcaagtgtatcaaatcgtttatcaagtattaaagtgataagtagagtattgtatccacatgaattgtcgttt 12012828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 293 - 383
Target Start/End: Complemental strand, 17121444 - 17121359
Alignment:
Q  293 tttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| ||||||||||||||| |||||| |||||||||||||||||||  |||||||||||||||||||| | |||||||||| ||||||||    
T  17121444 tttgcaatagagcaagttacttgtttt-ggttgcagaaaagtaagca--gcggttaggattcttcgaat-cttcctatttat-ttgttgga 17121359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 17359332 - 17359404
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    ||||||||||||||||||| |||||||||  |||  ||||||||||||||||||||  |||||||||||||||||    
T  17359332 ttacctgtttttggttgcataaaagtaagatgcg--gttaggattcttcgaatcccctctatttatattgttgga 17359404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 3591756 - 3591674
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||||||  |||||||| | |||||||||||||||||| ||||||||| ||||||||  ||||||||||| ||||||    
T  3591756 ttaggcaagtgtacaaaatcgtttatcaagtaataaagtgataaatagagtatcgtatccacatagattgtcgttttgtccaa 3591674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 251
Target Start/End: Complemental strand, 21334819 - 21334699
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    ||||| ||||||||||| || | ||||||||||||||||||||| |||||| |||||  ||| |||||| |||| ||||| || |||  |||||||||||    
T  21334819 ggcaaatgtatcaaatcatttatcaagtaataaagtgataagtatagtatcgtatccggaggaattgtcatttcttccaaacaattctcgttacttattt 21334720  T
Q  234 tt---agttgacgatataaaa 251  Q
    ||   ||||||||||||||||    
T  21334719 ttttaagttgacgatataaaa 21334699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 155 - 213
Target Start/End: Original strand, 22622910 - 22622968
Alignment:
Q  155 accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||    
T  22622910 accaagtaataaagtgattagtagagtatcatatcctaagggattgtcctttcgtccaa 22622968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 24267885 - 24267783
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||| ||||||||||||||| || | ||||||||||| ||||||||| ||||||||||||| |  |||||| |||||||| || || |||| ||||||||    
T  24267885 ttagacaagtgtatcaaatcatttatcaagtaataaaatgataagtatagtatcatatccatatagattgttgtttcgtctaatcaattcacgttactta 24267786  T
Q  231 ttt 233  Q
    |||    
T  24267785 ttt 24267783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 131 - 199
Target Start/End: Original strand, 26540891 - 26540959
Alignment:
Q  131 tttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggatt 199  Q
    |||||||||||||| ||||||| |||||||||||||||||| ||||||||||||| |||||||| |||||    
T  26540891 tttaggcaagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatcgtatccacaaggatt 26540959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 153 - 249
Target Start/End: Complemental strand, 31236129 - 31236032
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt-agttgacgatataa 249  Q
    |||| |||||||||||||||||| ||||||| ||||| |||  ||||||||||| ||||||  | |||  ||||||||||||| ||||||||||||||    
T  31236129 ttactaagtaataaagtgataagcagagtattatatctacaaagattgtcgttttgtccaaataattcgcgttacttatttttaagttgacgatataa 31236032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 16787829 - 16787725
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||| | ||||||||||| | |||||||||||||||||||||||||||| ||| ||||  ||||||||||| | |||| || ||   ||||||||    
T  16787829 ttaggcaagggaatcaaatcgtttatcaagtaataaagtgataagtagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttactta 16787730  T
Q  231 ttttt 235  Q
    |||||    
T  16787729 ttttt 16787725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 16916874 - 16916821
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||||||||||||||||||||||||  |||| ||||||||||||||||||    
T  16916874 ttacctgtttttggttgcagaaaagtaagca--gcgggtaggattcttcgaatccc 16916821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 16917011 - 16916931
Alignment:
Q  157 caagtaataaagtga-taagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    ||||||||||||| | ||||||||||||| ||||||||||||||||| |||||||| | || |||  ||||||||||||||    
T  16917011 caagtaataaagttagtaagtagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttattttta 16916931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 207
Target Start/End: Complemental strand, 27117821 - 27117745
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||  ||| |||| | |||||||||||    
T  27117821 ttaggcaagtttaccaaatcgtttaccaagtaataaagtgataagtagagtattgtattcacatgaattgtcgtttc 27117745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 44795387 - 44795446
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||||||||| ||||||| ||||||| |||||||| |||||||||||||||||||    
T  44795387 ttaccaagtaataaagagataagt-gagtatcgtatccacatggattgtcgtttcgtccaa 44795446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 288 - 377
Target Start/End: Original strand, 12208751 - 12208838
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatatt 377  Q
    |||| |||| || |||||||||| ||||||||| | | ||||||||||||||||||  |||||||||||||||||||| ||||||||||||    
T  12208751 atctgtttgcaacagagcaagtttacctgttttagct-gcagaaaagtaagcagcg--gttaggattcttcgaatcccccctatttatatt 12208838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 383
Target Start/End: Complemental strand, 15543895 - 15543823
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||| ||||||||||||||||||   |||||||||||||||||||||| | | |||||| |||||||    
T  15543895 ttacctgttttttgttgcagaaaagtaagca--acggttaggattcttcgaatcccccttgtttatactgttgga 15543823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 246
Target Start/End: Complemental strand, 15813257 - 15813143
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    ||||||||||||| ||||||||| | || ||||||||||||||||| || |||| |||||||| ||||| ||||| ||||||| ||  ||  ||||||||    
T  15813257 ttaggcaagtgtaccaaatcgtttatcatgtaataaagtgataagt-gactatcgtatccacaaggattttcgttgcgtccaaacaactctcgttactta 15813159  T
Q  231 tttttagttgacgata 246  Q
    |||| | |||||||||    
T  15813158 ttttaatttgacgata 15813143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 364
Target Start/End: Complemental strand, 18736202 - 18736127
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| |||| ||||||||||||| |||| |||||||||||||||||||| |||  ||||| |||||||||||||||||    
T  18736202 atctgtttgcaatagagcaagtttacctatttttggttgcagaaaagtaggca--gcggtaaggattcttcgaatccc 18736127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 26649073 - 26648992
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||| || |||  |||||||| ||||| |||||||||||||    
T  26649073 ttagacaagtgtatcaaatcgtttaccaagtaataaaatgataagt-gaatattgtatccacatggattatcgtttcgtccaa 26648992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 24054001 - 24054053
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||| |||||||    
T  24054001 caagtaataaagtaataagtagagtatc-tatccacagggattgtcctttcgtc 24054053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 32383101 - 32383048
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatc 184  Q
    ||||||||||||| ||||||||| |||||||||||||||||||| |||||||||    
T  32383101 ttaggcaagtgtaccaaatcgtttaccaagtaataaagtgataaatagagtatc 32383048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 9401526 - 9401605
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||| ||||||||||   |||||||||||| |||||||| | ||||||||||||||||| || |||  |||||||||||||    
T  9401526 ttaccaggtaataaagt---aagtagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttattttt 9401605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 18830501 - 18830581
Alignment:
Q  155 accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||| |||||||||  || | |||| ||||||||||||||||| |||||||||| || ||| | ||||||||||||    
T  18830501 accaagtaacaaagtgatacttaaattatcgtatccacagggattgtcctttcgtccaaacaattctttttacttattttt 18830581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 211
Target Start/End: Original strand, 23179819 - 23179874
Alignment:
Q  157 caagtaataaagtga-taagtagagtatcatatccacagggattgtcgtttcgtcc 211  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||    
T  23179819 caagtaataaagttagtaaatagagtatcatatccacagggattgtcctttcgtcc 23179874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 25958104 - 25958178
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    |||||| |||||||| |||||||| || ||||||| ||||| ||| |||||||||||||||||| |||||||||||    
T  25958104 tttaggaaagtgtattaaatcgtttacaaagtaatgaagtg-taaatagagtatcatatccacatggattgtcgtt 25958178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 727489 - 727567
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||||||||||||||||||  ||||||| |||||    |||||||| | || ||| ||||||||||||||    
T  727489 caagtaataaagtgataagtagagtatcgcatccacaaggattactctttcgtccgaacaattcttgttacttattttt 727567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 383
Target Start/End: Original strand, 16179168 - 16179246
Alignment:
Q  301 agagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||| |||| ||||||||||||||||||||||||  ||||||||||   |||||||||  ||| ||||||||||||||    
T  16179168 agagcaagtttacctatttttggttgcagaaaagtaagca--gcggttagga---ttcgaatccaccctgtttatattgttgga 16179246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 271
Target Start/End: Complemental strand, 18101022 - 18100976
Alignment:
Q  225 tacttatttttagttgacgatataaaataaaagagttaagggttaga 271  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||    
T  18101022 tacttattttaatttgacgatataaaatagaagagttaagggttaga 18100976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 374
Target Start/End: Complemental strand, 21973138 - 21973071
Alignment:
Q  305 caagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttat 374  Q
    |||||||||||||||||||||||||||||||| |||||     ||||||||||||||||| |||||||||    
T  21973138 caagttacctgtttttggttgcagaaaagtaa-cagcggttagaggattcttcgaatccc-cctatttat 21973071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 31235999 - 31235905
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||| || |||||||||||||| |||||||||||   |||||| ||||||| |||| ||  |||||||||||||||||    
T  31235999 atctctttgcaacagagcaagtttacttgtttttggttgcataaaagtaagca--acggttaagattctttgaattccctctatttatattgttgga 31235905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 48 - 85
Target Start/End: Original strand, 47401591 - 47401628
Alignment:
Q  48 tccaaaacgggttattttctttatatatagtatagata 85  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  47401591 tccaaaaggggttattttctttatatatagtatagata 47401628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 337
Target Start/End: Complemental strand, 9787815 - 9787779
Alignment:
Q  301 agagcaagttacctgtttttggttgcagaaaagtaag 337  Q
    ||||||||| |||||||||||||||||||||||||||    
T  9787815 agagcaagtgacctgtttttggttgcagaaaagtaag 9787779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 14781794 - 14781741
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||||||||||||||||||| | ||  || ||||||||||||||||||||    
T  14781794 ttacctgtttttggttgcagaaaagtgatca--gcagttaggattcttcgaatccc 14781741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 17121582 - 17121523
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatcca 191  Q
    |||| |||||||||||||| ||| | |||||||||||||| ||||||||||||||||||||    
T  17121582 ttagacaagtgtatcaaattgtttatcaagtaataaagtg-taagtagagtatcatatcca 17121523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 202
Target Start/End: Original strand, 18825655 - 18825722
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtc 202  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||| |||||| |||||||| || |||||    
T  18825655 ggcaagtgtaccaa-tcgttgaccaagtaataaagtgataagtaaagtatcgtatccacaagggttgtc 18825722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 233
Target Start/End: Complemental strand, 24307028 - 24306957
Alignment:
Q  161 taataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattt 233  Q
    |||||||||| ||||||||||||| ||| || |||||||||||||||  | ||||| |||| |||||||||||    
T  24307028 taataaagtg-taagtagagtatcgtattcatagggattgtcgtttcaactaagcaattcacgttacttattt 24306957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 34480987 - 34481027
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccaca 193  Q
    ||||||||||||||||||||||||||| ||| |||||||||    
T  34480987 ttaccaagtaataaagtgataagtagaatattatatccaca 34481027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 379
Target Start/End: Original strand, 9401684 - 9401744
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgt 379  Q
    |||||||| || ||||||||| ||||  ||||||||||||||||||||  |||||||||||||    
T  9401684 ttttggttacaaaaaagtaagtagcg--gttaggattcttcgaatcccctctatttatattgt 9401744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 22623043 - 22623114
Alignment:
Q  291 tatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||| || |||||||||| ||||||||| |||||||||||||||||||  || ||||||||||||| ||||||    
T  22623043 tatttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagca--gctgttaggattcttcaaatccc 22623114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 131 - 174
Target Start/End: Original strand, 33712659 - 33712702
Alignment:
Q  131 tttaggcaagtgtatcaaatcgttaccaagtaataaagtgataa 174  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||    
T  33712659 tttaggcaagtgtaccaaatctttaccaaataataaagtgataa 33712702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 211
Target Start/End: Complemental strand, 14781930 - 14781876
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtcc 211  Q
    |||||||||||||  ||||||||||||| |||||||| | |||||| ||||||||    
T  14781930 caagtaataaagtagtaagtagagtatcgtatccacaagaattgtcctttcgtcc 14781876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 16359867 - 16359948
Alignment:
Q  132 ttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||| ||||||| ||||||||||||||| || |||||| |||||  |||||||| | | ||||||||| |||||    
T  16359867 ttaggcaagtgtaccaaatcgtttaccaagtaataaaatg-taagtatagtattgtatccacatgtactgtcgtttcatccaa 16359948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 16823838 - 16823920
Alignment:
Q  3 aaaattgaaggtaatcttggaaagagaaaaagttggcacaaaaaatccaaaacgggttattttctttatatatagtatagata 85  Q
    |||||||| |||| | ||| |||||||||| || ||| |||||||  |  ||  |||||||||||||||||||||||||||||    
T  16823838 aaaattgatggtatttttgaaaagagaaaatgtcggcccaaaaaaaactgaagaggttattttctttatatatagtatagata 16823920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 383
Target Start/End: Complemental strand, 25961085 - 25961023
Alignment:
Q  318 tttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||||||||||||| |  |||||||||| |||| ||||||| ||||||||| ||||||||    
T  25961085 tttggttgcagaaaagtaagaa--gcggttaggactctttgaatccc-cctatttattttgttgga 25961023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 303 - 383
Target Start/End: Complemental strand, 18100947 - 18100871
Alignment:
Q  303 agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||||||||| |||||| |||||||||||||||||||  ||||||| |||| || ||||||| | ||||||| ||||||||    
T  18100947 agcaagttacatgtttt-ggttgcagaaaagtaagca--gcggttatgattatttgaatccc-cgtatttattttgttgga 18100871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 309 - 342
Target Start/End: Complemental strand, 21987922 - 21987889
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcg 342  Q
    ||||||||||||||||||| ||||||||||||||    
T  21987922 ttacctgtttttggttgcataaaagtaagcagcg 21987889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 87
Target Start/End: Original strand, 23773671 - 23773700
Alignment:
Q  58 gttattttctttatatatagtatagatata 87  Q
    ||||||||||||||||||||||||||||||    
T  23773671 gttattttctttatatatagtatagatata 23773700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 380
Target Start/End: Original strand, 33190843 - 33190915
Alignment:
Q  304 gcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgtt 380  Q
    |||||||||||| ||| | |||||||||||||||||  ||||||||||||||| | |||||| |||||||| |||||    
T  33190843 gcaagttacctggttt-gattgcagaaaagtaagca--gcggttaggattctttggatccct-ctatttattttgtt 33190915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 333
Target Start/End: Original strand, 155183 - 155211
Alignment:
Q  305 caagttacctgtttttggttgcagaaaag 333  Q
    |||||||||||||||||||||||||||||    
T  155183 caagttacctgtttttggttgcagaaaag 155211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 85
Target Start/End: Complemental strand, 5257034 - 5256998
Alignment:
Q  49 ccaaaacgggttattttctttatatatagtatagata 85  Q
    |||||||||  ||||||||||||||||||||||||||    
T  5257034 ccaaaacggtctattttctttatatatagtatagata 5256998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 356
Target Start/End: Complemental strand, 25404019 - 25403974
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattctt 356  Q
    |||||||||||||||| |||||||||||| |  |||||||||||||||    
T  25404019 ttacctgtttttggttccagaaaagtaagta--gcggttaggattctt 25403974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 153 - 383
Target Start/End: Complemental strand, 36076 - 35851
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagtt-gacgatataaaa 251  Q
    |||| ||||||||||||||||||||||||||| |||||||| | ||||||||||| |||||  | ||| ||||||||||||| |||| |||||||  |||    
T  36076 ttactaagtaataaagtgataagtagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttacttattttaagtttgacgata--aaa 35979  T
Q  252 taaaagagttaa-gggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttagg 350  Q
    || ||||||||| ||||||||||              ||||||||| || | || |||||||||| |||||||||||||||||||||||  |||||||||    
T  35978 tataagagttaaagggttagagatttgcaattttt--atctatttggaacaaagaaagttacctgattttggttgcagaaaagtaagca--gcggttagg 35883  T
Q  351 attcttcgaatccctcctatttatattgttgga 383  Q
    |||||| ||||||| ||||||||||||||||||    
T  35882 attcttagaatccc-cctatttatattgttgga 35851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 157 - 273
Target Start/End: Complemental strand, 43304 - 43188
Alignment:
Q  157 caagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataaaataaaa 256  Q
    ||||||||||||||||||||| |||| | |||||||| |||||||||||||||| || ||  || ||||||||||||| | |||||||||||||||||||    
T  43304 caagtaataaagtgataagtaaagtaacgtatccacaaggattgtcgtttcgtctaaacagctcgtgttacttattttaaattgacgatataaaataaaa 43205  T
Q  257 gagttaagggttagaga 273  Q
    ||| |||||||||||||    
T  43204 gagataagggttagaga 43188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Complemental strand, 43176 - 43132
Alignment:
Q  288 atctatttgaaatagagcaagttacctgtttttggttgcagaaaa 332  Q
    |||| |||| || |||||||||||||||||||||||| |||||||    
T  43176 atctgtttgcaacagagcaagttacctgtttttggttacagaaaa 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 64; Significance: 7e-28; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 132 - 273
Target Start/End: Original strand, 54856 - 54999
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcg-tttcgtccaagcacttcatgttactt 229  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||| ||  |  |   |||||||    
T  54856 ttaggaaagtgtaccaaatcgtttaccaagtaataaagtgataagtagagtattgtatccacagggattgtcgttttcgtctaaatagcttgcgttactt 54955  T
Q  230 atttttagttgacgatataaaataaaagagttaagggttagaga 273  Q
    ||||| |||| |||||||||||||||| || |||||||||||||    
T  54956 attttaagttaacgatataaaataaaaaagataagggttagaga 54999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 189
Target Start/End: Complemental strand, 48290 - 48235
Alignment:
Q  135 ggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatc 189  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  48290 ggcaaatgtatcaaatcgtttaccaagtaataaagtgataagtagagtatcgtatc 48235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 234362 - 234441
Alignment:
Q  156 ccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||||||||||||| |||||| || |||||| ||||||| |||||||| | || ||| ||| ||||||||||    
T  234362 ccaagtaataaagtgataagtatagtatcgtacccacagagattgtcctttcgtccgaacaattcttgtcacttattttt 234441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 153 - 384
Target Start/End: Original strand, 39602 - 39828
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcact-tcatgttacttatttttagttgacgatataaaa 251  Q
    |||||||||||||||||||||||||||| ||| ||||||||  |||||| |||| ||||||  |   |||  ||||||||||| ||||||||||||||||    
T  39602 ttaccaagtaataaagtgataagtagagcatcgtatccacattgattgttgttttgtccaaaaaaactcactttacttattttaagttgacgatataaaa 39701  T
Q  252 taaaagagttaagggttagagannnnnnnnnnnnnnatctatttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttagga 351  Q
    |||||||| ||||  |||||||              |||| |||| || ||||||||||||||||||| |||||||||||||||||||  ||||||| ||    
T  39702 taaaagagataagaattagagattgcaattttt---atctgtttgcaacagagcaagttacctgtttt-ggttgcagaaaagtaagca--gcggttatga 39795  T
Q  352 ttcttcgaatccctcctatttatattgttggag 384  Q
     |||| ||||||| ||||||||| |||||||||    
T  39796 ctctttgaatcccccctatttattttgttggag 39828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 138 - 236
Target Start/End: Complemental strand, 919 - 821
Alignment:
Q  138 aagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| ||||||  | |||||||||||||||||| || | || ||||||||||||||    
T  919 aagtgtactaaatcgttaccaagtaataaagtgataagtagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttattttta 821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 380
Target Start/End: Complemental strand, 750 - 681
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgtt 380  Q
    ||||||||||||||||||||||||||||| |  ||||||| ||||||||||| |||  || |||||||||||    
T  750 ttacctgtttttggttgcagaaaagtaagaa--gcggttaagattcttcgaaccccctctgtttatattgtt 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0838 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 137 - 273
Target Start/End: Original strand, 2371 - 2508
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||| ||||||||| ||||| |||||||| ||||||||||||||| |||||||| |||||| | |||| ||||| || ||   |||| |||||||     
T  2371 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattttg 2470  T
Q  236 agttgacgatataaaataaaagagttaagggttagaga 273  Q
    | ||||| || |||||||||||||| ||||||||||||    
T  2471 atttgacaatttaaaataaaagagtgaagggttagaga 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0832 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 137 - 273
Target Start/End: Original strand, 2402 - 2539
Alignment:
Q  137 caagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||| ||||||||| ||||| |||||||| ||||||||||||||| |||||||| |||||| | |||| ||||| || ||   |||| |||||||     
T  2402 caagtgtaccaaatcgtttaccaaataataaagggataagtagagtatcgtatccacatggattgacatttcttccaaacaattagcgttaattattttg 2501  T
Q  236 agttgacgatataaaataaaagagttaagggttagaga 273  Q
    | ||||| || |||||||||||||| ||||||||||||    
T  2502 atttgacaatttaaaataaaagagtgaagggttagaga 2539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 54; Significance: 6e-22; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 21299 - 21376
Alignment:
Q  158 aagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||| | || ||| |||||| |||||||    
T  21299 aagtaataaagtgataagtagagtatcatatccacagggattgtcctttcgtccgaacaattcttgttacatattttt 21376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 289 - 364
Target Start/End: Original strand, 25125 - 25198
Alignment:
Q  289 tctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||| || |||||||||| ||||||||| |||||||||||||||||||   ||||||||||||||| ||||||    
T  25125 tctatttgcaacagagcaagtttacctgtttt-ggttgcagaaaagtaagca--acggttaggattcttcaaatccc 25198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 235
Target Start/End: Original strand, 25009 - 25086
Alignment:
Q  158 aagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||| |||| |||||||| ||||||| ||| |||||| ||||||  ||||||||| || ||  ||||||||||||||    
T  25009 aagtattaaaatgataagttgagtatcgtatacacaggaattgtctgttcgtccaaacaattattgttacttattttt 25086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 3551 - 3631
Alignment:
Q  155 accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||| |||||||| | || ||| ||||||||||||||    
T  3551 accaagtaataaagtgataagtagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttattttt 3631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 12104 - 12181
Alignment:
Q  131 tttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    |||||||||||||| ||||| ||| ||||||||||||| ||||||||| | |||| ||| || | |||||||| ||||    
T  12104 tttaggcaagtgtaccaaattgtttaccaagtaataaactgataagtaaactatcgtattcatatggattgtcatttc 12181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 171 - 273
Target Start/End: Complemental strand, 2881 - 2778
Alignment:
Q  171 ataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttttagttgacgatataa-aataaaagagttaagggtta 269  Q
    |||||| ||||||| |||||||| | ||||||||||||||||| || ||| |||||||||||||   ||||| |||||| ||||||||||||||||||||    
T  2881 ataagttgagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttattttgttttgacaatataataataaaagagttaagggtta 2782  T
Q  270 gaga 273  Q
    ||||    
T  2781 gaga 2778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 6283 - 6365
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    ||||||||||||||||||||||| || |||||||||||| ||||||| |||||| |||||||| ||||||| |||||||||||    
T  6283 ttaggcaagtgtatcaaatcgtttacgaagtaataaagtcataagtaaagtatcgtatccacatggattgttgtttcgtccaa 6365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 69911 - 70013
Alignment:
Q  134 aggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatt 232  Q
    ||||||||||| |||||| || ||||||||||||||||| ||||| |||||| ||| |||| ||||||||||||||||||| || |||  ||||||||||    
T  69911 aggcaagtgtaccaaatcatttaccaagtaataaagtgacaagtaaagtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttatt 70010  T
Q  233 ttt 235  Q
    |||    
T  70011 ttt 70013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 357
Target Start/End: Original strand, 70066 - 70129
Alignment:
Q  293 tttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttc 357  Q
    |||| ||||||||||||| ||||||||||||||| |||||||||||||  || |||||||||||||    
T  70066 tttgcaatagagcaagtttacctgtttttggttgtagaaaagtaagca--gcagttaggattcttc 70129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 273
Target Start/End: Original strand, 35522 - 35675
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcactt 219  Q
    |||||||| | ||| |||| |||||| ||||||| | |||||||||||||||||| ||||||||  |||||||| ||||| ||||||||||||| || ||    
T  35522 tgatgtgcagattatgcaaatgtatctaatcgtttatcaagtaataaagtgataaatagagtattgtatccacatggattttcgtttcgtccaaacaatt 35621  T
Q  220 catgttacttatttttag-ttgacgatataaaataaaagagtt-aagggttagaga 273  Q
    |   ||||||||||| || |||| |  |||||||||||||||| ||||||||||||    
T  35622 cgccttacttattttaagtttgatg--ataaaataaaagagttaaagggttagaga 35675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 303 - 364
Target Start/End: Original strand, 35703 - 35761
Alignment:
Q  303 agcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||||||||||| ||||||||||| |||||||  ||||||| |||||||| ||||||    
T  35703 agcaagttacctgtttt-ggttgcagaaaggtaagca--gcggttaagattcttcaaatccc 35761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 126 - 202
Target Start/End: Original strand, 69072 - 69148
Alignment:
Q  126 tgcggtttaggcaagtgtatcaaatcgttaccaagtaataaagtgataagtagagtatcatatccacagggattgtc 202  Q
    ||||| ||||||||||||| |||||| |||||||||||||||||||||||| ||| ||| |||||||| ||||||||    
T  69072 tgcggattaggcaagtgtaccaaatcattaccaagtaataaagtgataagttgagaatcgtatccacaaggattgtc 69148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 81483 - 81561
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    |||||||||| ||  |||||||| ||||| |||||||||||||||||| ||||  |||||||| ||||||| ||||||||    
T  81483 ttaggcaagtttacgaaatcgtttaccaaataataaagtgataagtag-gtattgtatccacatggattgtggtttcgtc 81561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 115 - 205
Target Start/End: Complemental strand, 15585 - 15494
Alignment:
Q  115 aacaactgatgtgcggtttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtt 205  Q
    |||| ||||||  ||| |||||||||||||||||||| || ||||||||||||||| ||| |||||||||| |||||||| |||||||||||    
T  15585 aacacctgatggtcggattaggcaagtgtatcaaatcatttaccaagtaataaagtaatatgtagagtatcgtatccacatggattgtcgtt 15494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 89956 - 89878
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtc 210  Q
    |||| |||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||| | ||||||||||||||    
T  89956 ttagacaagtgtatcaaatcgtttaccaagtaataaagtg-taagtagagtatcatatctacaagtattgtcgtttcgtc 89878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold1869
Description:

Target: scaffold1869; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 136 - 213
Target Start/End: Complemental strand, 488 - 410
Alignment:
Q  136 gcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||||| |||||| || |||||||||||||||| |||||||||| |||| |||||||||||| ||||||||||    
T  488 gcaagtgtatcatatcgtttacaaagtaataaagtgatacgtagagtatcgtatcaacagggattgtcatttcgtccaa 410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1869; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 364
Target Start/End: Complemental strand, 328 - 264
Alignment:
Q  298 aatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||||| ||||||||||||||  |||||  ||||||  || ||||||||||||||||||||    
T  328 aatagagcaagtaacctgtttttggttttagaaatataagca--gccgttaggattcttcgaatccc 264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 15800 - 15870
Alignment:
Q  292 atttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||| || |||||||||||||||||||||||||| ||||||||||||  |||||||| ||||||||||||||    
T  15800 atttgcaacagagcaagttacctgtttttggttgcggaaaagtaagca--gcggttagtattcttcgaatccc 15870  T

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Target: scaffold0034 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 76439 - 76518
Alignment:
Q  157 caagtaataaagtga-taagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttt 235  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||  |||||||| | || ||| ||||||||||||||    
T  76439 caagtaataaagttagtaagtagagtatcatatccacagggattgttctttcgtccgaacaattcttgttacttattttt 76518  T

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Target: scaffold0034; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 76575 - 76628
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    ||||||||||||||||| |||||||||||||   || |||||||||||||||||||    
T  76575 ttacctgtttttggttgtagaaaagtaagca--ccgattaggattcttcgaatccc 76628  T

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Target: scaffold0957 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 213
Target Start/End: Original strand, 3138 - 3230
Alignment:
Q  121 tgatgtgcggtttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaa 213  Q
    |||||||||| |||||||||||||  |||| | |||||||||||||||||| || |||||||||| |||||||| |||||||| |||| |||||    
T  3138 tgatgtgcggattaggcaagtgtacaaaattgtttaccaagtaataaagtg-tatgtagagtatcgtatccacacggattgtcatttcatccaa 3230  T

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Target: scaffold0957; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 383
Target Start/End: Original strand, 3299 - 3386
Alignment:
Q  293 tttgaaatagagcaagttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||||||||| ||||||||||||||||  |||||||||||||  ||||||| |||| || ||||||| || |||||| ||||||||    
T  3299 tttgtaatagagcaatttacctgtttttggttatagaaaagtaagca--gcggttatgattttttgaatccc-cccatttatgttgttgga 3386  T

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Target: scaffold0672 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0672
Description:

Target: scaffold0672; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 1752 - 1805
Alignment:
Q  153 ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgttt 206  Q
    ||||||||||| |||||||||||||||||||| |||||||||| ||||||||||    
T  1752 ttaccaagtaaaaaagtgataagtagagtatcgtatccacaggaattgtcgttt 1805  T

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Target: scaffold0671 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 364
Target Start/End: Original strand, 609 - 654
Alignment:
Q  317 ttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||    
T  609 ttttggttgcagaaaagtaagca--gcggttaggattcttcgaatccc 654  T

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Target: scaffold0653 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 233
Target Start/End: Complemental strand, 4586 - 4484
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttactta 230  Q
    |||||||| |||| | ||||||| ||||||||| ||| || |||| |||||||| |||||||| |||||||| ||||||  || || ||| |||||||||    
T  4586 ttaggcaactgtacctaatcgtttaccaagtaaaaaaatggtaagcagagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttactta 4487  T
Q  231 ttt 233  Q
    |||    
T  4486 ttt 4484  T

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Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 138 - 257
Target Start/End: Original strand, 29909 - 30027
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttattttta 236  Q
    ||||||| ||||||||| |||||||||||||||| ||||||||||||  |||||| || ||||||||| ||   ||| || || | |||||||||||||     
T  29909 aagtgtaccaaatcgtttaccaagtaataaagtg-taagtagagtatggtatccatagagattgtcgtatctgtcaaacaatttacgttacttattttt- 30006  T
Q  237 gttgacgatataa-aataaaag 257  Q
     |||||||||||| ||||||||    
T  30007 -ttgacgatataacaataaaag 30027  T

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Target: scaffold0019 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 207
Target Start/End: Original strand, 11266 - 11312
Alignment:
Q  161 taataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||    
T  11266 taataaagtgataagtagagtatcatatctacatggattgttgtttc 11312  T

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Target: scaffold0019; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 234
Target Start/End: Complemental strand, 181803 - 181706
Alignment:
Q  137 caagtgtatcaaatcg-ttaccaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttcgtccaagcacttcatgttacttatttt 234  Q
    |||||||| ||||||  |||||||||||||||||||||| | ||||||| ||||||||  ||||||||||| ||||||  |  || |||||||||||||    
T  181803 caagtgtaccaaatcaattaccaagtaataaagtgataaat-gagtatcgtatccacatagattgtcgttttgtccaaataagtcgtgttacttatttt 181706  T

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Target: scaffold0048 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 78590 - 78666
Alignment:
Q  132 ttaggcaagtgtatcaaatcgtt-accaagtaataaagtgataagtagagtatcatatccacagggattgtcgtttc 207  Q
    ||||||||||||| || |||||| ||||||||||||| ||||||||  || ||| |||||| | |||||||||||||    
T  78590 ttaggcaagtgtaccatatcgtttaccaagtaataaactgataagttaagcatcgtatccataaggattgtcgtttc 78666  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 56 - 87
Target Start/End: Complemental strand, 151253 - 151222
Alignment:
Q  56 gggttattttctttatatatagtatagatata 87  Q
    ||||||||||||||||||||||||||||||||    
T  151253 gggttattttctttatatatagtatagatata 151222  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 138 - 183
Target Start/End: Original strand, 72074 - 72120
Alignment:
Q  138 aagtgtatcaaatcgtta-ccaagtaataaagtgataagtagagtat 183  Q
    ||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  72074 aagtgtaccaaattgttaaccaagtaataaagtgataagtagagtat 72120  T

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Target: scaffold0054; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 288 - 383
Target Start/End: Original strand, 72159 - 72253
Alignment:
Q  288 atctatttgaaatagagcaagtt-acctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttgga 383  Q
    |||| |||| || |||||||||| || | ||||| |||||||||||||||||||    || |||||||||||||||||  || ||||||||||||||    
T  72159 atctgtttgcaacagagcaagtttacgtatttttagttgcagaaaagtaagcagta--gtaaggattcttcgaatcccctctgtttatattgttgga 72253  T

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Target: scaffold0394 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 179
Target Start/End: Complemental strand, 14011 - 13963
Alignment:
Q  131 tttaggcaagtgtatcaaatcg-ttaccaagtaataaagtgataagtaga 179  Q
    |||||||||||||||||||||| |||||||||||| ||||| ||||||||    
T  14011 tttaggcaagtgtatcaaatcgtttaccaagtaattaagtg-taagtaga 13963  T

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Target: scaffold0620 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 138 - 173
Target Start/End: Complemental strand, 7697 - 7661
Alignment:
Q  138 aagtgtatcaaatcgtt-accaagtaataaagtgata 173  Q
    ||||||||||||||||| |||||||||||||||||||    
T  7697 aagtgtatcaaatcgtttaccaagtaataaagtgata 7661  T

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Target: scaffold0386 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 6643 - 6590
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||| ||||||||||| || |||||||||||  ||||| |||||||||||||||||    
T  6643 ttacttgtttttggtttcaaaaaagtaagca--gcggtcaggattcttcgaatccc 6590  T

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Target: scaffold0111 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 3805 - 3858
Alignment:
Q  309 ttacctgtttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccc 364  Q
    |||||| |||||| ||||||||||||||||   |||||||||||||||| ||||||    
T  3805 ttacctatttttgtttgcagaaaagtaagc--tgcggttaggattcttccaatccc 3858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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