View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0849_low_15 (Length: 381)
Name: NF0849_low_15
Description: NF0849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0849_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 97 - 370
Target Start/End: Original strand, 3323425 - 3323698
Alignment:
| Q |
97 |
ataatttctaggaccaataatatgatttgttaattttaagaaannnnnnngactcctgaaatcaaggaccaaagttggtgaatcacacaattatgaaatt |
196 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3323425 |
ataatttctaggaccaataatatgatttgttaattttaagaaatttttttgactcctgaaatcaaggaccaaagttggtgaatcacacaattatgaaatt |
3323524 |
T |
|
| Q |
197 |
ctaattcatatttgtgataaaacaaatgttccatttgcttggatataagtcacagtgtgaaaatttacttacttcatataatgatgagtgtgtataaagc |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
3323525 |
ctaattcatatttgtgataaaacaaatgttccatttgcttggatataagtcacagtgtgaaaatttacttacttcatataatgatgggtgtgtataaagc |
3323624 |
T |
|
| Q |
297 |
attttcttcaaagccttcccatcccattctatagagaactcttgtgcaatatcatataataaccctatcttcat |
370 |
Q |
| |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
3323625 |
attttcttcaaagccttaccatcccattctatagagaactcttgtgcaatatcatataataaccttatcttcat |
3323698 |
T |
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