View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0849_low_37 (Length: 257)
Name: NF0849_low_37
Description: NF0849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0849_low_37 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 30 - 257
Target Start/End: Complemental strand, 2366723 - 2366496
Alignment:
| Q |
30 |
atctggtcacaagagagaaaacattggtaagcattttaagagcctgtgtacttttctcatgtgaattgtactgtttttccattccatatatgtctggcat |
129 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
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| T |
2366723 |
atctggtcacaagagagaaaacattggtaagcattttaagagcatgtgtacttttctcatgtgatttgtactgtttttccattccatatatgtcaggcat |
2366624 |
T |
|
| Q |
130 |
ggaatggacaaggttgcactcaagctttaacagatcaatcacatctgcttcttctggtacacaaacatgcactgttacttcattcccttcagaagaatct |
229 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2366623 |
ggaatggacaaggttgcactcaagctttaacaaatcaatcacatctgcttcttttggtacacaaacatgcactgttacttcattcccttcagaagaatct |
2366524 |
T |
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| Q |
230 |
ctcaagtcttgtccaggcatggaatatc |
257 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
2366523 |
ctcaagtcttgtccaggcatggaatatc |
2366496 |
T |
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