View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0849_low_9 (Length: 421)
Name: NF0849_low_9
Description: NF0849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0849_low_9 |
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Alignment Details
Target: chr6 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 29 - 330
Target Start/End: Complemental strand, 32865552 - 32865251
Alignment:
| Q |
29 |
atgattgaatgcaaagaaataaacttggcagaaagtatgaaatttcatataatgtctacaattttaacgaaaactatacattacacagaaaatactataa |
128 |
Q |
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| T |
32865552 |
atgattgaatgcaaagaaataaacttggcagaaagtatgaaaattcatataatgtctacaattttaacgaaaactatacattacacagaaaatactataa |
32865453 |
T |
|
| Q |
129 |
ctataagcatcacaatggggaatgcttgattacatggtgtcacgtggaaacctatacatgaagcttacacaagagacaaaccacaaaagattatacaaac |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32865452 |
ctataagcatcacaatggggaatgcttgattacatggtgtcacgtggaaacctatacatgaagcttacacaagagacaaaccacaaaagattatacaaac |
32865353 |
T |
|
| Q |
229 |
tnnnnnnnntgttaaaagataactgtttgaagaagtttatgtggacatgttggaaaaaatgatccacttagttttatgttttaggttcattggtctattt |
328 |
Q |
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| T |
32865352 |
taaaaaaaatgttaaaagataactgtttgaagaagtttatgtggacatgttggaaaaaatgatccacttagttttatgttttaggttcattgatctattt |
32865253 |
T |
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| Q |
329 |
tg |
330 |
Q |
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|| |
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| T |
32865252 |
tg |
32865251 |
T |
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