View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0850_low_4 (Length: 316)
Name: NF0850_low_4
Description: NF0850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0850_low_4 |
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Alignment Details
Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 94 - 266
Target Start/End: Complemental strand, 33338007 - 33337833
Alignment:
| Q |
94 |
atctagtcaatcaagtcaaaggaaaaagatatttgtagagactccctnnnnnnnn-gatatttaaagagatattttatgaactaagttaaaaatgtggtg |
192 |
Q |
| |
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||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33338007 |
atctattcaatcaaatcaaaggaaaaagatatttgtagagactccctaaaaaaaaagatatttaaagagatattttatgaactaagttaaaaatgtggtg |
33337908 |
T |
|
| Q |
193 |
ttgtaaaataatttgatttggtgcatatgtaaaaaagttttacaacgt-tgtgatacaaattaaacaagtataat |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
33337907 |
ttgtaaaataatttgatttggtgcatatgtaaaaaagttttacaacgtctgtgatacaaattaaacaagtataat |
33337833 |
T |
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