View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0851-INSERTION-1 (Length: 541)

Name: NF0851-INSERTION-1
Description: NF0851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0851-INSERTION-1
NF0851-INSERTION-1
[»] chr6 (42 HSPs)
chr6 (189-541)||(14278083-14278441)
chr6 (8-163)||(14277830-14277986)
chr6 (305-537)||(14283685-14283915)
chr6 (398-537)||(14258459-14258597)
chr6 (192-270)||(28363960-28364038)
chr6 (291-364)||(14258375-14258448)
chr6 (192-267)||(20863401-20863476)
chr6 (195-270)||(6776585-6776660)
chr6 (200-270)||(12188286-12188356)
chr6 (192-270)||(31622966-31623044)
chr6 (201-270)||(33549127-33549196)
chr6 (192-270)||(6385885-6385963)
chr6 (201-271)||(11103419-11103489)
chr6 (201-270)||(30127423-30127492)
chr6 (192-264)||(20213070-20213142)
chr6 (192-264)||(22107093-22107165)
chr6 (200-271)||(11306157-11306228)
chr6 (200-254)||(13330126-13330180)
chr6 (229-270)||(10338186-10338227)
chr6 (200-264)||(15951285-15951349)
chr6 (200-263)||(23910096-23910157)
chr6 (192-271)||(646136-646214)
chr6 (192-267)||(11448890-11448964)
chr6 (199-254)||(14199929-14199984)
chr6 (192-267)||(15360202-15360276)
chr6 (231-270)||(24641204-24641243)
chr6 (204-270)||(1056672-1056738)
chr6 (229-271)||(8639128-8639170)
chr6 (219-293)||(13661520-13661594)
chr6 (20-70)||(14257998-14258048)
chr6 (201-267)||(17149569-17149634)
chr6 (240-270)||(34786477-34786507)
chr6 (201-270)||(3779362-3779431)
chr6 (201-270)||(6758406-6758475)
chr6 (202-267)||(22576086-22576150)
chr6 (192-292)||(24334000-24334101)
chr6 (209-253)||(2092523-2092567)
chr6 (205-249)||(10650027-10650071)
chr6 (194-270)||(12234484-12234560)
chr6 (214-270)||(19638001-19638057)
chr6 (202-270)||(21418493-21418561)
chr6 (192-252)||(28841455-28841515)
[»] scaffold1030 (1 HSPs)
scaffold1030 (298-541)||(3049-3291)
[»] chr2 (48 HSPs)
chr2 (195-270)||(16918556-16918631)
chr2 (192-270)||(42602577-42602655)
chr2 (201-270)||(1729839-1729908)
chr2 (192-270)||(42327370-42327448)
chr2 (200-264)||(14500306-14500370)
chr2 (200-270)||(34041571-34041641)
chr2 (201-270)||(11251110-11251179)
chr2 (192-292)||(37480075-37480176)
chr2 (200-270)||(42922437-42922508)
chr2 (200-270)||(19244132-19244202)
chr2 (200-270)||(19322791-19322861)
chr2 (201-267)||(28194246-28194311)
chr2 (200-295)||(11062357-11062453)
chr2 (200-252)||(45026784-45026836)
chr2 (192-266)||(1435091-1435164)
chr2 (192-254)||(21195651-21195713)
chr2 (192-270)||(23052498-23052576)
chr2 (200-270)||(30410532-30410602)
chr2 (200-270)||(40416373-40416443)
chr2 (201-270)||(7799019-7799088)
chr2 (202-267)||(12517738-12517803)
chr2 (213-269)||(4262298-4262354)
chr2 (203-267)||(8192466-8192529)
chr2 (201-292)||(19016031-19016123)
chr2 (200-294)||(4438962-4439057)
chr2 (215-270)||(29503294-29503349)
chr2 (192-270)||(12086104-12086182)
chr2 (192-270)||(21213792-21213870)
chr2 (212-300)||(5147674-5147763)
chr2 (200-269)||(13803519-13803588)
chr2 (197-254)||(33839240-33839297)
chr2 (194-270)||(18372285-18372361)
chr2 (192-267)||(30359680-30359754)
chr2 (215-262)||(38410438-38410485)
chr2 (215-270)||(39715015-39715070)
chr2 (192-266)||(3890332-3890405)
chr2 (231-296)||(16381668-16381734)
chr2 (192-262)||(25637182-25637252)
chr2 (201-263)||(26176310-26176371)
chr2 (229-270)||(12994388-12994429)
chr2 (201-293)||(18825340-18825432)
chr2 (201-293)||(32106565-32106658)
chr2 (201-289)||(33962768-33962857)
chr2 (201-270)||(41504920-41504989)
chr2 (200-264)||(2750609-2750673)
chr2 (212-248)||(12497777-12497813)
chr2 (214-270)||(26545863-26545919)
chr2 (192-252)||(41908613-41908673)
[»] chr7 (77 HSPs)
chr7 (398-532)||(35131250-35131383)
chr7 (404-532)||(35138564-35138691)
chr7 (200-270)||(26459393-26459463)
chr7 (192-292)||(5273565-5273666)
chr7 (192-267)||(29385718-29385793)
chr7 (9-107)||(35131099-35131198)
chr7 (192-293)||(15137552-15137654)
chr7 (194-268)||(17040989-17041063)
chr7 (201-270)||(31706448-31706517)
chr7 (200-295)||(18363693-18363789)
chr7 (195-270)||(7721392-7721467)
chr7 (200-294)||(39631842-39631937)
chr7 (200-270)||(7744095-7744165)
chr7 (200-270)||(25655211-25655281)
chr7 (200-270)||(29785284-29785354)
chr7 (200-270)||(43215207-43215277)
chr7 (194-267)||(5579211-5579284)
chr7 (192-292)||(30579335-30579436)
chr7 (194-263)||(42262072-42262141)
chr7 (8-107)||(35138406-35138506)
chr7 (192-267)||(38374574-38374649)
chr7 (200-270)||(9608612-9608682)
chr7 (200-270)||(9836184-9836254)
chr7 (192-270)||(11720935-11721013)
chr7 (192-270)||(20335806-20335884)
chr7 (229-290)||(21854550-21854612)
chr7 (200-270)||(22760886-22760956)
chr7 (200-270)||(33222393-33222463)
chr7 (200-262)||(37094780-37094842)
chr7 (192-269)||(279929-280005)
chr7 (192-257)||(9183166-9183231)
chr7 (201-262)||(22696348-22696408)
chr7 (201-269)||(23552142-23552210)
chr7 (214-270)||(30442511-30442567)
chr7 (201-292)||(31835192-31835284)
chr7 (202-270)||(43590930-43590998)
chr7 (195-270)||(4566406-4566481)
chr7 (201-248)||(21558173-21558220)
chr7 (200-294)||(33869428-33869523)
chr7 (211-265)||(9871280-9871334)
chr7 (192-270)||(19553477-19553554)
chr7 (192-270)||(24438222-24438300)
chr7 (192-266)||(41519085-41519159)
chr7 (192-292)||(2446308-2446409)
chr7 (229-270)||(25021347-25021388)
chr7 (229-270)||(25590634-25590675)
chr7 (201-254)||(27313718-27313771)
chr7 (410-455)||(35123179-35123224)
chr7 (237-270)||(48771961-48771994)
chr7 (192-252)||(2882991-2883051)
chr7 (195-267)||(12211642-12211713)
chr7 (229-269)||(26703149-26703189)
chr7 (229-269)||(37233584-37233624)
chr7 (232-295)||(42836016-42836080)
chr7 (200-268)||(48079668-48079736)
chr7 (192-267)||(2751294-2751368)
chr7 (195-270)||(3280464-3280538)
chr7 (200-271)||(17113817-17113888)
chr7 (203-270)||(25956279-25956345)
chr7 (201-268)||(28646991-28647057)
chr7 (200-263)||(37162333-37162396)
chr7 (211-270)||(41519258-41519317)
chr7 (200-270)||(2962482-2962552)
chr7 (237-267)||(5934147-5934177)
chr7 (200-262)||(13106765-13106826)
chr7 (192-270)||(45709683-45709761)
chr7 (229-270)||(7801203-7801244)
chr7 (237-270)||(15905693-15905726)
chr7 (213-270)||(20952145-20952202)
chr7 (200-292)||(23301585-23301678)
chr7 (229-270)||(28236593-28236634)
chr7 (201-270)||(49050475-49050544)
chr7 (200-268)||(11700190-11700257)
chr7 (192-252)||(18056750-18056810)
chr7 (229-269)||(30217903-30217943)
chr7 (195-267)||(37056237-37056308)
chr7 (201-292)||(48039631-48039723)
[»] chr5 (43 HSPs)
chr5 (192-270)||(14495780-14495858)
chr5 (192-293)||(29075780-29075882)
chr5 (200-270)||(34984829-34984899)
chr5 (192-270)||(43442219-43442297)
chr5 (200-268)||(14285186-14285254)
chr5 (200-294)||(7918452-7918547)
chr5 (200-270)||(18595984-18596054)
chr5 (199-270)||(29692368-29692439)
chr5 (192-270)||(16773830-16773908)
chr5 (200-270)||(25627080-25627150)
chr5 (200-270)||(37258349-37258419)
chr5 (192-271)||(17028239-17028318)
chr5 (211-270)||(27596350-27596409)
chr5 (192-266)||(84851-84925)
chr5 (217-270)||(87423-87476)
chr5 (192-292)||(21589288-21589389)
chr5 (229-270)||(30883210-30883251)
chr5 (201-265)||(31074260-31074324)
chr5 (196-259)||(21086748-21086811)
chr5 (192-267)||(38631065-38631139)
chr5 (213-264)||(39327086-39327137)
chr5 (192-293)||(8278250-8278352)
chr5 (200-270)||(16457833-16457903)
chr5 (200-270)||(21549120-21549190)
chr5 (215-269)||(41165627-41165681)
chr5 (213-270)||(22020858-22020915)
chr5 (212-269)||(25979194-25979251)
chr5 (196-269)||(43230753-43230826)
chr5 (202-270)||(1410645-1410712)
chr5 (194-270)||(17761332-17761408)
chr5 (192-267)||(8484765-8484839)
chr5 (200-247)||(17155868-17155915)
chr5 (200-270)||(26078034-26078104)
chr5 (201-267)||(30000142-30000208)
chr5 (229-270)||(4793100-4793141)
chr5 (200-253)||(5156108-5156161)
chr5 (229-270)||(16436641-16436681)
chr5 (192-257)||(18206621-18206686)
chr5 (233-293)||(18989017-18989078)
chr5 (192-257)||(27840994-27841059)
chr5 (192-268)||(12877718-12877794)
chr5 (200-248)||(18974005-18974053)
chr5 (206-293)||(31669014-31669101)
[»] chr4 (66 HSPs)
chr4 (200-270)||(37109334-37109404)
chr4 (200-270)||(38869791-38869861)
chr4 (192-263)||(28635726-28635797)
chr4 (201-268)||(37274443-37274510)
chr4 (199-270)||(53496900-53496971)
chr4 (200-270)||(4249200-4249270)
chr4 (200-269)||(23377980-23378049)
chr4 (192-270)||(7949429-7949507)
chr4 (200-270)||(31759641-31759711)
chr4 (201-270)||(19680772-19680841)
chr4 (192-292)||(51250497-51250598)
chr4 (201-268)||(2622379-2622446)
chr4 (200-270)||(7292781-7292851)
chr4 (200-270)||(15180764-15180831)
chr4 (192-267)||(46295123-46295198)
chr4 (193-252)||(51622526-51622585)
chr4 (200-270)||(1730472-1730542)
chr4 (200-270)||(16581716-16581786)
chr4 (192-293)||(19238552-19238654)
chr4 (216-269)||(5450117-5450170)
chr4 (201-270)||(52880165-52880234)
chr4 (192-292)||(55427175-55427276)
chr4 (205-269)||(3743098-3743162)
chr4 (195-294)||(46545709-46545809)
chr4 (192-267)||(8325354-8325429)
chr4 (230-292)||(37720227-37720290)
chr4 (215-266)||(39509097-39509148)
chr4 (192-290)||(40283961-40284060)
chr4 (200-263)||(48480809-48480872)
chr4 (195-254)||(51969056-51969115)
chr4 (201-267)||(7093395-7093460)
chr4 (192-270)||(8030179-8030257)
chr4 (195-265)||(8306513-8306583)
chr4 (229-294)||(9241037-9241103)
chr4 (200-270)||(11592136-11592206)
chr4 (200-270)||(33632119-33632189)
chr4 (199-265)||(46329192-46329258)
chr4 (201-270)||(8714702-8714771)
chr4 (201-270)||(13265092-13265161)
chr4 (194-251)||(21375819-21375876)
chr4 (201-270)||(33619229-33619298)
chr4 (213-270)||(49576890-49576947)
chr4 (192-268)||(51954139-51954215)
chr4 (218-269)||(12821992-12822043)
chr4 (192-267)||(25852233-25852307)
chr4 (215-270)||(30938217-30938272)
chr4 (200-267)||(32992638-32992705)
chr4 (192-267)||(33992645-33992719)
chr4 (192-267)||(40058956-40059030)
chr4 (204-267)||(56409977-56410039)
chr4 (200-266)||(2185015-2185081)
chr4 (194-252)||(5795386-5795444)
chr4 (192-270)||(31826632-31826710)
chr4 (192-266)||(38838824-38838898)
chr4 (229-267)||(47202435-47202473)
chr4 (196-270)||(56236894-56236968)
chr4 (192-269)||(12793886-12793963)
chr4 (201-270)||(13015450-13015519)
chr4 (226-263)||(14451755-14451792)
chr4 (229-270)||(17618304-17618345)
chr4 (201-270)||(24124039-24124108)
chr4 (201-293)||(44865333-44865426)
chr4 (192-244)||(2732043-2732095)
chr4 (192-248)||(19229183-19229239)
chr4 (229-292)||(21344817-21344880)
chr4 (215-294)||(47044715-47044795)
[»] chr3 (78 HSPs)
chr3 (200-270)||(46518651-46518721)
chr3 (201-270)||(4222164-4222233)
chr3 (200-270)||(27093344-27093414)
chr3 (200-270)||(30311329-30311399)
chr3 (192-270)||(32651413-32651491)
chr3 (200-269)||(28703387-28703456)
chr3 (200-292)||(31520588-31520681)
chr3 (200-270)||(15048044-15048114)
chr3 (192-270)||(28531033-28531111)
chr3 (201-267)||(31608508-31608574)
chr3 (200-257)||(3427536-3427593)
chr3 (192-269)||(31788946-31789022)
chr3 (200-268)||(10445122-10445190)
chr3 (192-267)||(44069784-44069859)
chr3 (200-270)||(4844494-4844564)
chr3 (200-270)||(4870190-4870260)
chr3 (200-270)||(51903861-51903931)
chr3 (200-270)||(53412968-53413038)
chr3 (200-269)||(27259185-27259254)
chr3 (226-270)||(7975441-7975485)
chr3 (202-270)||(14339633-14339701)
chr3 (203-263)||(39253727-39253787)
chr3 (194-266)||(44743832-44743904)
chr3 (199-262)||(2709408-2709471)
chr3 (191-270)||(36720404-36720483)
chr3 (192-271)||(47860778-47860856)
chr3 (192-270)||(2667885-2667963)
chr3 (204-270)||(16354879-16354945)
chr3 (200-270)||(37788448-37788518)
chr3 (192-254)||(47810719-47810781)
chr3 (189-259)||(51766929-51766999)
chr3 (201-267)||(53863852-53863917)
chr3 (192-292)||(10499084-10499185)
chr3 (216-269)||(11090164-11090217)
chr3 (213-270)||(21960574-21960631)
chr3 (201-267)||(4252509-4252574)
chr3 (192-270)||(8075102-8075180)
chr3 (195-269)||(13808863-13808937)
chr3 (192-270)||(14186671-14186748)
chr3 (192-270)||(30232353-30232431)
chr3 (200-270)||(40063642-40063712)
chr3 (192-270)||(47236946-47237024)
chr3 (201-270)||(16991565-16991634)
chr3 (229-270)||(47279416-47279457)
chr3 (201-292)||(5499391-5499483)
chr3 (196-240)||(17155057-17155101)
chr3 (234-270)||(28928896-28928932)
chr3 (200-269)||(34062531-34062602)
chr3 (192-252)||(40777054-40777113)
chr3 (414-453)||(12404067-12404106)
chr3 (215-254)||(17108896-17108935)
chr3 (192-267)||(19716223-19716298)
chr3 (201-272)||(26158832-26158902)
chr3 (192-263)||(30715772-30715842)
chr3 (199-254)||(33899653-33899708)
chr3 (191-270)||(35415291-35415370)
chr3 (215-270)||(47454615-47454670)
chr3 (192-267)||(53234014-53234088)
chr3 (192-270)||(8170695-8170773)
chr3 (202-252)||(9345245-9345295)
chr3 (236-270)||(9557343-9557377)
chr3 (201-263)||(11612329-11612391)
chr3 (232-270)||(17554794-17554832)
chr3 (200-262)||(20501727-20501789)
chr3 (192-292)||(8051214-8051315)
chr3 (201-250)||(8390680-8390729)
chr3 (201-266)||(12279543-12279607)
chr3 (194-271)||(19154653-19154730)
chr3 (213-266)||(26481954-26482007)
chr3 (201-270)||(26505345-26505414)
chr3 (205-254)||(36010781-36010830)
chr3 (201-270)||(51742380-51742448)
chr3 (230-270)||(18319181-18319221)
chr3 (195-267)||(30257643-30257714)
chr3 (226-270)||(42430357-42430400)
chr3 (194-238)||(46552986-46553030)
chr3 (192-260)||(52769958-52770026)
chr3 (215-267)||(54990728-54990780)
[»] chr1 (73 HSPs)
chr1 (200-270)||(8177165-8177235)
chr1 (201-270)||(33700757-33700826)
chr1 (192-292)||(51814494-51814595)
chr1 (200-270)||(2799885-2799955)
chr1 (200-270)||(15786303-15786373)
chr1 (192-270)||(52336749-52336827)
chr1 (194-270)||(10526846-10526922)
chr1 (200-294)||(9165178-9165273)
chr1 (200-270)||(36371493-36371563)
chr1 (201-270)||(21267977-21268046)
chr1 (201-291)||(44126396-44126487)
chr1 (200-270)||(8904437-8904507)
chr1 (192-289)||(9964441-9964539)
chr1 (200-270)||(11063579-11063649)
chr1 (200-262)||(40810498-40810560)
chr1 (201-270)||(6650618-6650687)
chr1 (200-268)||(18459214-18459282)
chr1 (194-292)||(19528306-19528403)
chr1 (217-292)||(41508831-41508907)
chr1 (200-263)||(22049811-22049874)
chr1 (192-270)||(31794239-31794317)
chr1 (231-270)||(44046162-44046201)
chr1 (200-254)||(3265963-3266017)
chr1 (192-270)||(6122817-6122895)
chr1 (192-270)||(31383773-31383851)
chr1 (201-270)||(9643793-9643862)
chr1 (190-267)||(39964531-39964607)
chr1 (209-270)||(51703802-51703863)
chr1 (201-269)||(4566572-4566640)
chr1 (199-267)||(4824997-4825065)
chr1 (192-252)||(45266875-45266935)
chr1 (200-255)||(1247151-1247206)
chr1 (201-252)||(19940856-19940907)
chr1 (192-267)||(31605823-31605898)
chr1 (192-267)||(36428738-36428813)
chr1 (199-250)||(51281394-51281445)
chr1 (201-267)||(1138598-1138663)
chr1 (207-269)||(12587294-12587356)
chr1 (194-268)||(15904636-15904710)
chr1 (192-270)||(21547455-21547533)
chr1 (192-270)||(24730407-24730485)
chr1 (192-270)||(27476746-27476824)
chr1 (195-268)||(1600270-1600343)
chr1 (192-264)||(17297013-17297086)
chr1 (201-270)||(17745240-17745309)
chr1 (201-270)||(28411353-28411422)
chr1 (208-269)||(31049637-31049698)
chr1 (192-292)||(40257399-40257500)
chr1 (192-268)||(50901607-50901682)
chr1 (202-270)||(52116766-52116834)
chr1 (192-267)||(8077666-8077740)
chr1 (192-271)||(9879460-9879539)
chr1 (213-264)||(12370192-12370243)
chr1 (215-270)||(25297795-25297850)
chr1 (192-267)||(30677195-30677269)
chr1 (192-267)||(34228900-34228974)
chr1 (195-270)||(37400297-37400372)
chr1 (201-252)||(42949276-42949327)
chr1 (200-267)||(43445989-43446056)
chr1 (192-251)||(44961807-44961866)
chr1 (192-270)||(1094548-1094626)
chr1 (231-292)||(16169992-16170054)
chr1 (200-270)||(16893417-16893487)
chr1 (213-259)||(17439951-17439997)
chr1 (202-252)||(49101754-49101803)
chr1 (192-267)||(9500459-9500533)
chr1 (201-242)||(29753700-29753741)
chr1 (199-252)||(32916785-32916838)
chr1 (201-270)||(42983358-42983427)
chr1 (229-270)||(47753737-47753778)
chr1 (215-267)||(952537-952589)
chr1 (215-267)||(39714777-39714828)
chr1 (215-263)||(48615341-48615389)
[»] scaffold0299 (1 HSPs)
scaffold0299 (197-270)||(11551-11624)
[»] scaffold0006 (2 HSPs)
scaffold0006 (200-268)||(18324-18392)
scaffold0006 (200-266)||(222536-222602)
[»] scaffold0194 (1 HSPs)
scaffold0194 (192-270)||(13021-13099)
[»] chr8 (51 HSPs)
chr8 (192-270)||(3305163-3305241)
chr8 (200-270)||(18540321-18540391)
chr8 (201-270)||(6536543-6536612)
chr8 (200-269)||(33017238-33017307)
chr8 (201-270)||(35690048-35690117)
chr8 (192-264)||(11793496-11793568)
chr8 (192-268)||(44780089-44780165)
chr8 (192-270)||(968385-968463)
chr8 (192-270)||(2203515-2203593)
chr8 (192-270)||(23361624-23361702)
chr8 (195-268)||(13129693-13129766)
chr8 (192-269)||(43594293-43594370)
chr8 (195-270)||(27750753-27750828)
chr8 (195-270)||(30483862-30483937)
chr8 (192-270)||(7140732-7140809)
chr8 (192-270)||(11492048-11492126)
chr8 (192-270)||(11819799-11819877)
chr8 (200-270)||(12988451-12988521)
chr8 (192-270)||(16852363-16852441)
chr8 (201-263)||(18128540-18128601)
chr8 (192-270)||(28783083-28783161)
chr8 (213-270)||(3624603-3624660)
chr8 (201-270)||(8794329-8794398)
chr8 (202-270)||(19703472-19703540)
chr8 (192-270)||(20994432-20994511)
chr8 (196-270)||(6436534-6436608)
chr8 (213-255)||(22193360-22193402)
chr8 (192-250)||(33727848-33727906)
chr8 (226-267)||(3524410-3524451)
chr8 (200-269)||(6569754-6569823)
chr8 (201-262)||(29915904-29915965)
chr8 (201-270)||(30774720-30774789)
chr8 (229-289)||(36205198-36205259)
chr8 (196-260)||(24675491-24675555)
chr8 (229-292)||(26688865-26688929)
chr8 (213-269)||(34628666-34628722)
chr8 (199-267)||(35287742-35287810)
chr8 (192-272)||(40136939-40137017)
chr8 (192-267)||(3734727-3734801)
chr8 (192-270)||(4435998-4436076)
chr8 (192-254)||(16843769-16843831)
chr8 (201-267)||(19471632-19471697)
chr8 (201-267)||(19542556-19542621)
chr8 (201-267)||(19590075-19590140)
chr8 (200-270)||(29431034-29431104)
chr8 (192-270)||(29858024-29858102)
chr8 (200-292)||(8059632-8059725)
chr8 (192-292)||(8484999-8485100)
chr8 (213-270)||(12281517-12281574)
chr8 (201-250)||(28787480-28787529)
chr8 (201-269)||(31087242-31087310)
[»] scaffold0258 (1 HSPs)
scaffold0258 (192-270)||(15298-15376)
[»] scaffold0004 (1 HSPs)
scaffold0004 (200-269)||(81547-81616)
[»] scaffold0002 (1 HSPs)
scaffold0002 (201-270)||(94955-95024)
[»] scaffold0180 (1 HSPs)
scaffold0180 (208-270)||(19953-20015)
[»] scaffold0172 (1 HSPs)
scaffold0172 (192-270)||(15752-15830)
[»] scaffold0063 (1 HSPs)
scaffold0063 (200-270)||(35372-35442)
[»] scaffold0417 (1 HSPs)
scaffold0417 (213-292)||(10219-10299)
[»] scaffold0238 (2 HSPs)
scaffold0238 (200-252)||(2694-2746)
scaffold0238 (209-268)||(5218-5277)
[»] scaffold0032 (1 HSPs)
scaffold0032 (201-292)||(112282-112374)
[»] scaffold0291 (1 HSPs)
scaffold0291 (215-270)||(2468-2523)
[»] scaffold1367 (1 HSPs)
scaffold1367 (212-270)||(835-893)
[»] scaffold0126 (1 HSPs)
scaffold0126 (200-270)||(25330-25400)
[»] scaffold0118 (1 HSPs)
scaffold0118 (192-270)||(41608-41686)
[»] scaffold0236 (1 HSPs)
scaffold0236 (195-252)||(24818-24875)
[»] scaffold0070 (1 HSPs)
scaffold0070 (201-270)||(42504-42573)
[»] scaffold0021 (1 HSPs)
scaffold0021 (230-270)||(157000-157040)
[»] scaffold0576 (1 HSPs)
scaffold0576 (192-267)||(5186-5260)
[»] scaffold0517 (1 HSPs)
scaffold0517 (195-270)||(7704-7779)
[»] scaffold0368 (1 HSPs)
scaffold0368 (201-252)||(14949-15000)
[»] scaffold0300 (1 HSPs)
scaffold0300 (199-270)||(4363-4434)
[»] scaffold0047 (1 HSPs)
scaffold0047 (194-292)||(14949-15047)
[»] scaffold0471 (1 HSPs)
scaffold0471 (201-270)||(8626-8695)
[»] scaffold0009 (1 HSPs)
scaffold0009 (237-270)||(19867-19900)
[»] scaffold0008 (1 HSPs)
scaffold0008 (201-270)||(49329-49398)


Alignment Details
Target: chr6 (Bit Score: 262; Significance: 1e-146; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 189 - 541
Target Start/End: Original strand, 14278083 - 14278441
Alignment:
Q  189 atcagcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatacatcaggcaaacccatgtg 288  Q
    ||||||||| |||||||| ||||||||||||||||| || ||||||| ||||||||| ||||||||| ||| ||||||||||| ||||| ||||||||||    
T  14278083 atcagcccacccaaattgacaccagagagaatcaaacctgagaccttaaggaggagcgcactcccaggtccaaagccaatacaccaggccaacccatgtg 14278182  T
Q  289 ggttattaaatacttggtagttattcttacttaggatggaatccataatgtaataagcatcacttcattcttactagctattagaaatacaaaagaaata 388  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14278183 ggttattaaatactttgtagttattcttacttaggatggaatccataatgtaataagcatcacttcattcttactagctattagaaatacaaaagaaata 14278282  T
Q  389 ca-------ttagtagtattgctaatcataccttatagacttgagcaggaaaccagaagcgaccagtctcaaggaagatatacaaaaaccatttttgagt 481  Q
    ||       |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||    
T  14278283 cattagtatttagtagtattgctaatcataccttataaacttgagcaggaaaccagaagcgaccagtctcaaggaggatatac-aaagccatttttgagt 14278381  T
Q  482 gaattttaatccaaccaatcaaggttctattgattttcaaataagaatgaaggcgttgag 541  Q
    || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14278382 gatttttaatcaaaccaatcaaggttctattgattttcaaataagaatgaaggcgttgag 14278441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 8 - 163
Target Start/End: Original strand, 14277830 - 14277986
Alignment:
Q  8 ttagaatcatagctaacgatggcgtcataacagtataatgtttgcaatgttgcctgcataaaa-gttatatgtgattaaactaattttaaatcaaaggat 106  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  14277830 ttagaatcatagctaacgatggcgtcataacagtataatatttgcaatgttgcctgcataaaaagttatatgtgattaaactaattttaaatcaaatgat 14277929  T
Q  107 aaaagtgaatgagagtatattaaacccctaatttaggcctttaagattcaatagtat 163  Q
    || |||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  14277930 aatagtgaatgagagtatattaaacccataatttaggcctttaagtttcaatagtat 14277986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 305 - 537
Target Start/End: Original strand, 14283685 - 14283915
Alignment:
Q  305 gtagttattcttacttaggatggaatccataatgtaataagcatcacttcattcttactagctattagaaatacaaaagaaatacattagtag-tattgc 403  Q
    |||||| | ||||||||||||| |||||| ||| || |||||||||||| ||||||||||| || ||||| |||||||||||||| || |||| ||| |     
T  14283685 gtagttctacttacttaggatgcaatccacaatttagtaagcatcactttattcttactaggtagtagaagtacaaaagaaatac-ttggtagttatgga 14283783  T
Q  404 taatcataccttatagacttgagcaggaaaccagaagcgaccagtctcaaggaagatatacaaaaaccatttttgagtgaattttaatccaaccaatcaa 503  Q
    ||||||||||||||| |||||||||||||| ||||||| || |||||||||||| |||||| ||| ||| |||||| ||| |||||||  || |||||||    
T  14283784 taatcataccttataaacttgagcaggaaagcagaagcaactagtctcaaggaaaatatac-aaagcca-ttttgaatgatttttaataaaagcaatcaa 14283881  T
Q  504 ggttctattgattttcaaataagaatgaaggcgt 537  Q
    || ||||||| |||| |||||||||||| |||||    
T  14283882 ggatctattgctttttaaataagaatgatggcgt 14283915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 398 - 537
Target Start/End: Original strand, 14258459 - 14258597
Alignment:
Q  398 tattgctaatcataccttatagacttgagcaggaaaccagaagcgaccagtctcaaggaagatatacaaaaaccatttttgagtgaattttaatccaacc 497  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||| |||  ||||||||| ||| |||||||| ||      
T  14258459 tattgataatcatagcttataaacttgagcaggaaaccagaagcgaccagtctcaaggaaaatatac-aaaggcatttttgaatgatttttaatcaaaga 14258557  T
Q  498 aatcaaggttctattgattttcaaataagaatgaaggcgt 537  Q
    |||||||| ||||||| ||||||||||||||||| |||||    
T  14258558 aatcaaggatctattgcttttcaaataagaatgatggcgt 14258597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 28364038 - 28363960
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||| ||||||||| |||| ||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  28364038 agcccatccaaattgacaccagagataatcgaatctgagaccttgaggaggagcacactcgcagatcccaaaccaatac 28363960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 14258375 - 14258448
Alignment:
Q  291 ttattaaatacttggtagttattcttacttaggatggaatccataatgtaataagcatcacttcattcttacta 364  Q
    ||||||||||| | |||||||||||||||||||||| |||||| ||| ||||||||||||||| ||||||||||    
T  14258375 ttattaaatacatagtagttattcttacttaggatgcaatccacaatttaataagcatcactttattcttacta 14258448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 20863476 - 20863401
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| |||||||||||  |||||||||||||||| |||||||||||||||||||||||| |  |||||||||||    
T  20863476 agcccacccaaattggcattagagagaatcaaatctgagaccttgaggaggagcacactccaaagtcccaagccaa 20863401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 6776585 - 6776660
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||  ||||||||||||||||  | |||| | |||||||||||||| ||||||||||||||||||||    
T  6776585 ccatccaaattgaaaccagagagaatcaaacttgagacatcgaggaggagcacacccccagatcccaagccaatac 6776660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 12188286 - 12188356
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| |||||||||| ||  | | ||||||||||||||||||||||||| ||||||||||||||    
T  12188286 caaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaatac 12188356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 31622966 - 31623044
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| |||| ||| || ||||| || |||||| |||||||||||||||||||| ||||||||||||||    
T  31622966 agcccacccaaattgacaccggagtgattcaaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 31623044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 33549196 - 33549127
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| | ||||||||| || || |||||| |||||||||||||||||||| ||||||||||||||    
T  33549196 aaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 33549127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 6385963 - 6385885
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||||| ||||| ||||||||| || || ||||||| |||||||||||| |||||| ||||||| ||||||    
T  6385963 agcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccaggtcccaagtcaatac 6385885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 201 - 271
Target Start/End: Original strand, 11103419 - 11103489
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 271  Q
    ||||||||||||||||||||| ||||  ||||||| |||||||||||||| |||  |||||||| ||||||    
T  11103419 aaattggcaccagagagaatcgaatcggagaccttaaggaggagcacactaccaagtcccaagcgaataca 11103489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 30127492 - 30127423
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| || |||||| || || |||||| || |||||||||||||||||| |||||||||||||    
T  30127492 aaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaatac 30127423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 20213142 - 20213070
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 264  Q
    |||||| |||||||| ||| |||| ||||| || || |||| |||||||||||||||||||||| ||||||||    
T  20213142 agcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 20213070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 22107165 - 22107093
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 264  Q
    |||||| |||||||| ||| |||| ||||| || || |||| |||||||||||||||||||||| ||||||||    
T  22107165 agcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccaggtcccaagc 22107093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 11306157 - 11306228
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 271  Q
    |||||||||||||||||||||| || || ||||||||| || ||||| ||||||||  || |||||||||||    
T  11306157 caaattggcaccagagagaatcgaacctgagaccttgaagatgagcatactcccaggcccaaagccaataca 11306228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 13330180 - 13330126
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||  |||||||    
T  13330180 caaattggcacaagagagaatcgaatctgagaccttgaggaggagcttactccca 13330126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 10338186 - 10338227
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  10338186 agaccttgaggaggagcacactcctaggtcccaagccaatac 10338227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 15951285 - 15951349
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 264  Q
    |||||||| ||||||||||||  ||  | |||||||||||||||||||||||||| ||| |||||    
T  15951285 caaattggtaccagagagaattgaacatgagaccttgaggaggagcacactcccaaatctcaagc 15951349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 23910096 - 23910157
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    |||||||||||||||||   || || || ||||||||||||||||||||||||||| |||||||    
T  23910096 caaattggcaccagagat--tcgaacctgagaccttgaggaggagcacactcccaggtcccaag 23910157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 646214 - 646136
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 271  Q
    |||||||| |||||||||||||| |||||| ||  ||| | ||| |||| ||||||||||||| |||||| |||||||||    
T  646214 agcccatctaaattggcaccagaaagaatcgaacttaa-atcttaaggatgagcacactcccaaatcccaggccaataca 646136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 11448964 - 11448890
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||||||||| || || ||||| |  ||||||||| ||||| ||||||||||||||    
T  11448964 agcccaccgaaattggcaccagagagaatcgaacctgagacc-tctggaggagcaaactccaagatcccaagccaa 11448890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 254
Target Start/End: Original strand, 14199929 - 14199984
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    |||||||| ||| |||  ||||| ||||| ||||||||||||||||||||||||||    
T  14199929 ccaaattgacactagaaggaatcgaatctgagaccttgaggaggagcacactccca 14199984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 15360202 - 15360276
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||| ||||| || || |||||||  ||||||||| ||||| ||||||||||||||    
T  15360202 agcccaccgaaattggcaccagagggaatcgaacctgagaccttt-ggaggagcaaactccaagatcccaagccaa 15360276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 24641204 - 24641243
Alignment:
Q  231 accttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||| |||||||||||||||||||||||||||| ||||||    
T  24641204 acctcgaggaggagcacactcccagatcccaagtcaatac 24641243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 1056672 - 1056738
Alignment:
Q  204 ttggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||| ||  ||| |||||||||| ||||| |||||||  ||||| ||||||||    
T  1056672 ttggcaccagagagaatcgaacttaaaaccttgaggatgagcatactcccaagtcccaggccaatac 1056738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 271
Target Start/End: Complemental strand, 8639170 - 8639128
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaataca 271  Q
    |||||||||||||||||||| | ||||||| ||||||||||||    
T  8639170 agaccttgaggaggagcacatttccagatctcaagccaataca 8639128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 13661594 - 13661520
Alignment:
Q  219 atcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatacatcaggcaaacccatgtgggtta 293  Q
    |||||| || |||||| |||||||||||||||||||  |  ||||||||||||  || | |||||||||||||||    
T  13661594 atcaaacctgagacctcgaggaggagcacactcccaagtgtcaagccaatacactagaccaacccatgtgggtta 13661520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 14257998 - 14258048
Alignment:
Q  20 ctaacgatggcgtcataacagtataatgtttgcaatgttgcctgcataaaa 70  Q
    ||||| ||||| ||||||||||||| ||||| ||| |||||||||||||||    
T  14257998 ctaacaatggcatcataacagtatagtgttttcaaagttgcctgcataaaa 14258048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 17149569 - 17149634
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||| ||||||||| ||||| || || |||||||||| ||||||||||||| ||||||||| ||||    
T  17149569 aaattagcaccagagggaatcgaacctgagaccttgag-aggagcacactccaagatcccaaaccaa 17149634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 240 - 270
Target Start/End: Original strand, 34786477 - 34786507
Alignment:
Q  240 aggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||||||||||||    
T  34786477 aggagcacactcccagatcccaagccaatac 34786507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 3779431 - 3779362
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| || ||||| ||||  ||||| |||||||||| |||||||||||||||  || |||||||||||    
T  3779431 aaattgacatcagagggaattgaatctgagaccttgagaaggagcacactcccaagtctcaagccaatac 3779362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 6758406 - 6758475
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||| |   | |||||| |||| |||||||||||||| |||| ||||||||||    
T  6758406 aaattgacaccagagagaatcgatcttgagacctcgaggtggagcacactcccaaatcctaagccaatac 6758475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 22576150 - 22576086
Alignment:
Q  202 aattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||||||||||| ||||| ||||| ||||||   ||||||||| ||||| ||||||||||||||    
T  22576150 aattggcaccagagggaatcgaatctgagacctct-ggaggagcaaactccaagatcccaagccaa 22576086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 24334000 - 24334101
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| ||||||||||||| | ||||||  || || |||||||||||||||||| ||| | |  ||||||||||| | |||| ||| |||||| |||||    
T  24334000 agcccacccaaattggcaccggtgagaattgaacctgagaccttgaggaggagcatactgcaatgtcccaagccaacaccatccggccaacccaagtggg 24334099  T
Q  291 tt 292  Q
    ||    
T  24334100 tt 24334101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 2092523 - 2092567
Alignment:
Q  209 accagagagaatcaaatctaagaccttgaggaggagcacactccc 253  Q
    |||||||| |||||||| | |||||||||| ||||||||||||||    
T  2092523 accagagaaaatcaaatttgagaccttgagcaggagcacactccc 2092567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 10650027 - 10650071
Alignment:
Q  205 tggcaccagagagaatcaaatctaagaccttgaggaggagcacac 249  Q
    ||||||| |||||||||||| || ||||||||| |||||||||||    
T  10650027 tggcaccggagagaatcaaacctgagaccttgaagaggagcacac 10650071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 12234484 - 12234560
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||| |||  ||||||||| || || |||||| |||  ||||||||||||||| ||||||| ||||||    
T  12234484 cccatctaaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaatac 12234560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 19638001 - 19638057
Alignment:
Q  214 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| || ||||||||||  ||||||||||||||| | ||| ||||||||    
T  19638001 agagaatcaaacctgagaccttgagctggagcacactcccaggttccacgccaatac 19638057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 21418561 - 21418493
Alignment:
Q  202 aattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| || ||||||| ||  | |||| | |||||||||||||||||||  ||||||||||||||    
T  21418561 aattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaatac 21418493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 28841515 - 28841455
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||| ||| |||||| |||| ||||||||| ||  | ||||||||||||||||||||||||    
T  28841515 agccaatctaaattgacaccggagagaatcgaacttgagaccttgaggaggagcacactcc 28841455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1030 (Bit Score: 216; Significance: 1e-118; HSPs: 1)
Name: scaffold1030
Description:

Target: scaffold1030; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 298 - 541
Target Start/End: Complemental strand, 3291 - 3049
Alignment:
Q  298 atacttggtagttattcttacttaggatggaatccataatgtaataagcatcacttcattcttactagctattagaaatacaaaagaaatacattagtag 397  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3291 atactttgtagttattcttacttaggatggaatccataatgtaataagcatcacttcattcttactagctattagaaatacaaaagaaatacattagtag 3192  T
Q  398 tattgctaatcataccttatagacttgagcaggaaaccagaagcgaccagtctcaaggaagatatacaaaaaccatttttgagtgaattttaatccaacc 497  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||    
T  3191 tattgctaatcataccttataaacttgagcaggaaaccagaagcgaccagtctcaaggaagatatac-aaagccatttttgagtgatttttaatcaaacc 3093  T
Q  498 aatcaaggttctattgattttcaaataagaatgaaggcgttgag 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  3092 aatcaaggttctattgattttcaaataagaatgaaggcgttgag 3049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 16918556 - 16918631
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||||    
T  16918556 ccatccaaagtggcaccagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaatac 16918631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 42602655 - 42602577
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  42602655 agcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaatac 42602577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 1729908 - 1729839
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  1729908 aaattggcaccagagagaatcaaatctaagacctagaggaggagcacactcccaagtcccaagccaatac 1729839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 42327370 - 42327448
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||  |||||||| || || ||||||||||||||||||||||||||| ||||||||||||||    
T  42327370 agcccacccaaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatac 42327448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 14500370 - 14500306
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 264  Q
    |||||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||| |||||    
T  14500370 caaattggcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagc 14500306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 34041571 - 34041641
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||| |||||||| || ||||||||||||||||||||||| ||||||| ||| ||||||    
T  34041571 caaattggcaccagagggaatcaaacctgagaccttgaggaggagcacactctcagatcctaagtcaatac 34041641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 11251179 - 11251110
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||||||||||||||| || |||||||||||||||||||||| |||  ||||||||||||||    
T  11251179 aaattgacaccagagagaatcaaacctgagaccttgaggaggagcacacttccaagtcccaagccaatac 11251110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 37480176 - 37480075
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| ||||||||| ||| | ||||||| || || ||||||||||||||||||||||| ||| ||||||||||||| || ||||| |||||| |||||    
T  37480176 agcccacccaaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtggg 37480077  T
Q  291 tt 292  Q
    ||    
T  37480076 tt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 42922508 - 42922437
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagacctt-gaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || || ||||||| |||||||||||||||||||| | ||||||||||||    
T  42922508 caaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaatac 42922437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 19244202 - 19244132
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || || |||||||| |||||||||||||| ||| ||||||| ||||||    
T  19244202 caaattggcaccagagagaatcgaacctgagaccttggggaggagcacactctcaggtcccaagtcaatac 19244132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 19322861 - 19322791
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| ||||||||||||| |  ||||||||| ||||||||||||||||| |||||| |||||||    
T  19322861 caaattggcactagagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaatac 19322791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 28194246 - 28194311
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||||||||||||| || |||||||||| | |||||||||||||| ||||||||||||||    
T  28194246 aaattggcaccagagagaatcgaacctaagacctt-aagaggagcacactccaagatcccaagccaa 28194311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 200 - 295
Target Start/End: Complemental strand, 11062453 - 11062357
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttatt 295  Q
    ||||||| ||| ||||||||||||| || ||||||||||||| ||||||||||||  | ||||||||||| ||  |||| |||||| ||||||||||    
T  11062453 caaattgacacaagagagaatcaaacctgagaccttgaggagaagcacactcccaagttccaagccaatatcactaggccaacccaagtgggttatt 11062357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 45026836 - 45026784
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||||||||||||||||||||||  | ||||||||||||||||||||||||    
T  45026836 caaattggcaccagagagaatcaaacatgagaccttgaggaggagcacactcc 45026784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 1435164 - 1435091
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    |||||| |||||||| |||||||||||||| || || ||||||||||||| |||||||||| | |||||||||||    
T  1435164 agcccacccaaattgacaccagagagaatcgaa-ctgagaccttgaggagaagcacactcctaaatcccaagcca 1435091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 21195651 - 21195713
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    ||||||||||||||| ||| |||| ||||| || || ||||||||||||||||||||||||||    
T  21195651 agcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactccca 21195713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 23052498 - 23052576
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||| |||||| || ||||||| || || ||||||||||||| ||||||||||||  ||||||||||||||    
T  23052498 agcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactcccaagtcccaagccaatac 23052576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 30410532 - 30410602
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||| |||| ||  | || ||||||||||||||||||||| || ||||||||||||||    
T  30410532 caaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaatac 30410602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 40416373 - 40416443
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || || ||||||| |||||||||| |||||||| | ||||| ||||||    
T  40416373 caaattggcaccagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaatac 40416443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 7799019 - 7799088
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||  ||||||||| ||||| ||| || |||||||||||||||||||  ||||||||||||||    
T  7799019 aaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaatac 7799088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 202 - 267
Target Start/End: Original strand, 12517738 - 12517803
Alignment:
Q  202 aattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||||||||| ||||||||||  | |||||||||||||||||| ||||| || |||||||||||    
T  12517738 aattggcaccagggagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaagccaa 12517803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 269
Target Start/End: Original strand, 4262298 - 4262354
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    ||||||||| || || |||||||||||||||||||||| |||| |||||||||||||    
T  4262298 gagagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 267
Target Start/End: Original strand, 8192466 - 8192529
Alignment:
Q  203 attggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||||| ||||| || || |||||||||| ||||||||||||| ||||||||||||||    
T  8192466 attggcaccagagggaatcgaacctgagaccttgag-aggagcacactccaagatcccaagccaa 8192529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 19016123 - 19016031
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    ||||||||||| | ||||||||||  | |||||| |||||||||||||||||||  || |||||||||| |||||| | |||||| |||||||    
T  19016123 aaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 4438962 - 4439057
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 294  Q
    |||||||| |||||| |||||| ||  |  |||||||||||||||||||||| |||||||||||  |||| ||| |||| |||||| |||||||||    
T  4438962 caaattggtaccagaaagaatcgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattaggccaacccaagtgggttat 4439057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 29503349 - 29503294
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| || || ||||||||||||||||||||||||||| |||||| |||||||    
T  29503349 gagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaatac 29503294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 12086104 - 12086182
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | ||||| ||||| ||| ||||| || |  |||||||||||||||||||||| |||| ||||||||||||||    
T  12086104 agcccacctaaattagcaccggagggaatcgaacccgagaccttgaggaggagcacacttccaggtcccaagccaatac 12086182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 21213870 - 21213792
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | ||||||||||| | ||||||| || || ||||||  ||||||| ||||||||||| ||||||||||||||    
T  21213870 agcccacctaaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaatac 21213792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 300
Target Start/End: Original strand, 5147674 - 5147763
Alignment:
Q  212 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttattaaata 300  Q
    |||||||||| ||||  |||||||||| ||||||| ||||||||||| |||| ||||| ||  || | |||||| |||||||||||||||    
T  5147674 agagagaatcgaatccgagaccttgagaaggagcatactcccagatctcaagtcaataccactagaccaacccaagtgggttattaaata 5147763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 13803588 - 13803519
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||||||| |||||| |||| || || |||||||||||||||||||||||| |  || ||||||||||    
T  13803588 caaattggcatcagagataatcgaacctgagaccttgaggaggagcacactcctaagtctcaagccaata 13803519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 254
Target Start/End: Original strand, 33839240 - 33839297
Alignment:
Q  197 atccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    ||||||||| |||||||| |||||  || || ||||||||||||||||||||||||||    
T  33839240 atccaaattagcaccagaaagaattgaacctgagaccttgaggaggagcacactccca 33839297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 18372361 - 18372285
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||| |||||||||| || |||||||||||| ||||||||| ||||| ||||| |||| ||| || |||| ||||||    
T  18372361 cccacccaaattggctccggagagaatcaaacctaagacctcgaggatgagcatactctcaggtctcaagtcaatac 18372285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 30359754 - 30359680
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| ||||||||||||  | ||||||| ||  | |||||||||||||||||||||||| || |||||||||||    
T  30359754 agcccacccaaattggcactggggagaatcgaaa-tgagaccttgaggaggagcacactccaaggtcccaagccaa 30359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 262
Target Start/End: Original strand, 38410438 - 38410485
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 262  Q
    ||||||||||  ||||||||| |||||||||||||||| |||||||||    
T  38410438 gagaatcaaacataagacctttaggaggagcacactccgagatcccaa 38410485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 39715070 - 39715015
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| || || |||||| |||||||||||||||||||| ||||||| ||||||    
T  39715070 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaatac 39715015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 3890405 - 3890332
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    |||||||| ||||||||||| ||||||||| || | ||||||| |||||| ||||| |||| || ||||||||||    
T  3890405 agcccatctaaattggcacccgagagaatcgaa-ccaagacctagaggagaagcactctccaaggtcccaagcca 3890332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 296
Target Start/End: Original strand, 16381668 - 16381734
Alignment:
Q  231 accttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttatta 296  Q
    |||||||||||||| |||||| ||||||||||||| ||| ||  |||| |||||| |||||||||||    
T  16381668 accttgaggaggagaacactctcagatcccaagcctataccactaggccaacccaagtgggttatta 16381734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 25637252 - 25637182
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 262  Q
    |||||| | ||||||||| | ||||||| | || || |||||| ||| |||||||||||||||||||||||    
T  25637252 agcccacctaaattggcatcggagagaaccgaacctgagacctcgagaaggagcacactcccagatcccaa 25637182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 26176310 - 26176371
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    ||||||||||||| ||||||| ||||| ||||||||| ||||||||||| || || |||||||    
T  26176310 aaattggcaccagggagaatcgaatctgagaccttga-gaggagcacaccccaaggtcccaag 26176371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 12994388 - 12994429
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||    
T  12994388 agaccttaaggaggagcacactcccaggtcccaagtcaatac 12994429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 18825432 - 18825340
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 293  Q
    ||||||||||| | || |||||||  | |||||||||| ||||||||||||| || ||||||||||| | || |||| ||||||| ||||||||    
T  18825432 aaattggcaccggggaaaatcaaacttgagaccttgag-aggagcacactcctaggtcccaagccaacaccaccaggtaaacccaagtgggtta 18825340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 32106658 - 32106565
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 293  Q
    ||||||||||| ||||||||| |  | |||||||||||  |||||||||||| || ||||||| ||| | || ||||| |||||| ||||||||    
T  32106658 aaattggcaccggagagaatcgagcccaagaccttgagagggagcacactccaaggtcccaagtcaacaccaccaggccaacccaagtgggtta 32106565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 289
Target Start/End: Original strand, 33962768 - 33962857
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgg 289  Q
    |||||||||| |  ||||||| ||||  ||| || |||||||||||||||||||| |||||| |||||| ||| |||| |||||| ||||    
T  33962768 aaattggcactaaggagaatcgaatccgagatctcgaggaggagcacactcccagttcccaaaccaatatcattaggccaacccaagtgg 33962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 41504920 - 41504989
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||| ||||||||| ||||  |||  | ||||||||||| |||||||| ||||||||||||||    
T  41504920 aaattgacaccggagagaatcgaatcggagatatcgaggaggagcatactcccaggtcccaagccaatac 41504989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 2750609 - 2750673
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 264  Q
    ||||||||||| |||||||||| ||  | |||||||||||| ||||||||| || ||| ||||||    
T  2750609 caaattggcactagagagaatcgaacatgagaccttgaggaagagcacactaccggattccaagc 2750673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 212 - 248
Target Start/End: Original strand, 12497777 - 12497813
Alignment:
Q  212 agagagaatcaaatctaagaccttgaggaggagcaca 248  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  12497777 agagagaatcgaatctgagaccttgaggaggagcaca 12497813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 26545919 - 26545863
Alignment:
Q  214 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||  | |||||| ||| ||||||||||| ||||||||||||| |||||    
T  26545919 agagaatcaaacttgagacctcgagaaggagcacacttccagatcccaagctaatac 26545863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 41908613 - 41908673
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||| ||||||||||||| | || |||| ||  | ||||||||||||||||||||||||    
T  41908613 agcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactcc 41908673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 9e-25; HSPs: 77)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 398 - 532
Target Start/End: Original strand, 35131250 - 35131383
Alignment:
Q  398 tattgctaatcataccttatagacttgagcaggaaaccagaagcgaccagtctcaaggaagatatacaaaaaccatttttgagtgaattttaatccaacc 497  Q
    ||||| ||||||||||||||| |||||||||||||||||||| || ||||||||||| || |||||  | | |||||||||| ||| |||||||| || |    
T  35131250 tattgttaatcataccttataaacttgagcaggaaaccagaaacggccagtctcaagaaaaatata-tagagccatttttgaatgatttttaatcaaatc 35131348  T
Q  498 aatcaaggttctattgattttcaaataagaatgaa 532  Q
    | ||| || |||||||||| |||||||||||||||    
T  35131349 agtcatggatctattgattctcaaataagaatgaa 35131383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 404 - 532
Target Start/End: Original strand, 35138564 - 35138691
Alignment:
Q  404 taatcataccttatagacttgagcaggaaaccagaagcgaccagtctcaaggaagatatacaaaaaccatttttgagtgaattttaatccaaccaatcaa 503  Q
    ||||||||||||||| |||||||||||||||||||| || ||||||||||| || |||||  | | |||||||||| ||| |||||||| || || |||     
T  35138564 taatcataccttataaacttgagcaggaaaccagaaacggccagtctcaagaaaaatata-tagagccatttttgaatgatttttaatcaaatcagtcat 35138662  T
Q  504 ggttctattgattttcaaataagaatgaa 532  Q
    || |||||||||| |||||||||||||||    
T  35138663 ggatctattgattctcaaataagaatgaa 35138691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 26459393 - 26459463
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||    
T  26459393 caaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatac 26459463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 5273565 - 5273666
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||  || ||||||||||| | || ||||| |||||| |||||    
T  5273565 agcccacccaaattggcaccggagacaatcaaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccaggccaacccaagtggg 5273664  T
Q  291 tt 292  Q
    ||    
T  5273665 tt 5273666  T

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Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 29385718 - 29385793
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| |||||||||||||| ||||||||||| || |||||||||||||||||||||||| |  |||||||||||    
T  29385718 agcccacccaaattggcaccaaagagaatcaaacctgagaccttgaggaggagcacactccaaagtcccaagccaa 29385793  T

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Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 9 - 107
Target Start/End: Original strand, 35131099 - 35131198
Alignment:
Q  9 tagaatcatagctaacgatggcgtcataacagtataatgtttgcaatgttgcctgcat-aaaagttatatgtgattaaactaattttaaatcaaaggata 107  Q
    |||||||||| ||||| ||||| |||||||||| |||||||  |||||| |||||||| ||||||| ||| |||||||||| |||||||||||| |||||    
T  35131099 tagaatcataactaacaatggcatcataacagtgtaatgttaacaatgtcgcctgcatgaaaagttctatatgattaaactgattttaaatcaagggata 35131198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 15137654 - 15137552
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| |||||||| |||||||||||||| || || |||||||||||||||||||||||| | |||||||| || || || ||||| |||||| |||||    
T  15137654 agcccacccaaattgacaccagagagaatctaacctgagaccttgaggaggagcacactcctaaatcccaagtcagtaccaccaggccaacccaagtggg 15137555  T
Q  291 tta 293  Q
    |||    
T  15137554 tta 15137552  T

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Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 268
Target Start/End: Original strand, 17040989 - 17041063
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    |||| ||||||||||||  ||||||||| || || |||||||||||||||||||||| |||||||||||||||||    
T  17040989 cccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaat 17041063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 31706517 - 31706448
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||| |||||||||| ||||||||||||| || |||||||||||||| |||||| |||||||    
T  31706517 aaattggcaccaaagagaatcaagtctaagaccttgacgatgagcacactcccaggtcccaaaccaatac 31706448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 295
Target Start/End: Complemental strand, 18363789 - 18363693
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttatt 295  Q
    |||||||| || ||||||||||||| || |||||||||||||||||||||||||| ||| |||||| ||| ||  |||| |||||| ||||||||||    
T  18363789 caaattggtactagagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactaggccaacccaagtgggttatt 18363693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 7721467 - 7721392
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||| |||||||||||||| ||  | |||||||||||||||| |||||||||| |||||| |||||||    
T  7721467 ccatccaaattgacaccagagagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaatac 7721392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 39631937 - 39631842
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 294  Q
    ||||||||||| |||||||||| || || |||||||||||||||||  |||||||| ||||||||||||| ||  |||| |||||| |||||||||    
T  39631937 caaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggttat 39631842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 7744095 - 7744165
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||||||| || |||||||||||||||||| | |||||||||| ||||| ||||    
T  7744095 caaatttgcaccagagagaatcaaacctgagaccttgaggaggagcatagtcccagatcctaagcctatac 7744165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 25655211 - 25655281
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || || | ||||||||||||| ||||||| ||||||||||| ||||||    
T  25655211 caaattggcaccagagagaatcgaacctgaaaccttgaggaggatcacactcacagatcccaagtcaatac 25655281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 29785284 - 29785354
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||| |||||| ||  | |||||||||||||||||||||| |||||||||||||| ||||    
T  29785284 caaattggcaccagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcctatac 29785354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 43215277 - 43215207
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||  |||||||||| || || |||||||||||||||||||||||| || ||||||||||||||    
T  43215277 caaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatac 43215207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 267
Target Start/End: Original strand, 5579211 - 5579284
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||| ||||||||||||| | |||| ||||| || |||||||||||||||||||||||| || |||||||||||    
T  5579211 cccacccaaattggcaccggggagagtcaaacctgagaccttgaggaggagcacactccaaggtcccaagccaa 5579284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 30579436 - 30579335
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| | |||||||||||||||| |||| || || |||||||||||||| | |||||||||| || |||||||||| || ||||| |||||| |||||    
T  30579436 agcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtggg 30579337  T
Q  291 tt 292  Q
    ||    
T  30579336 tt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 42262072 - 42262141
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    ||||||||| ||||||| |||||||||  ||||| ||||||| ||||||||||||||| |||||||||||    
T  42262072 cccatccaatttggcacaagagagaattgaatctgagacctttaggaggagcacactctcagatcccaag 42262141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 35138406 - 35138506
Alignment:
Q  8 ttagaatcatagctaacgatggcgtcataacagtataatgtttgcaatgttgcctgcat-aaaagttatatgtgattaaactaattttaaatcaaaggat 106  Q
    |||||||||||  |||| ||||| ||||||||||||||||||  || ||| |||||||| ||||||| ||| |||||||||| ||||||||| || ||||    
T  35138406 ttagaatcataagtaacaatggcatcataacagtataatgttaacagtgtagcctgcatgaaaagttctatatgattaaactgattttaaattaagggat 35138505  T
Q  107 a 107  Q
    |    
T  35138506 a 35138506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 38374574 - 38374649
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||| | ||||||| || ||||||||||||||||||||||||||  || |||||||||||    
T  38374574 agcccacctaaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaa 38374649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 9608612 - 9608682
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| ||| |||||||||| || || ||| |||||||||||| |||||||||||||||||||| ||||    
T  9608612 caaattgacactagagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctatac 9608682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 9836184 - 9836254
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| ||| |||||||||| || || ||| |||||||||||| |||||||||||||||||||| ||||    
T  9836184 caaattgacactagagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctatac 9836254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 11720935 - 11721013
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||||||||||  | ||||||| ||||| | ||||| |||||||||||| |||||| ||||||||||||||    
T  11720935 agcccacccaaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaatac 11721013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 20335806 - 20335884
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||| || | | ||||||| || || |||||| |||||||||||||||||||  ||||||||||||||    
T  20335806 agcccatccaaattgacatcggtgagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatac 20335884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 229 - 290
Target Start/End: Complemental strand, 21854612 - 21854550
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||| ||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||||    
T  21854612 agactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 22760956 - 22760886
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||| | | ||||||| || || ||||||||||||||||||||||||||| ||||||| ||||||    
T  22760956 caaattggcatcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaatac 22760886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 33222463 - 33222393
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| |||||||||||||| || || |||||||||||| ||| ||||| |||| ||||||||||||||    
T  33222463 caaattgacaccagagagaatcgaacctgagaccttgaggatgagtacacttccaggtcccaagccaatac 33222393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 37094842 - 37094780
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 262  Q
    |||||| |||| |||||||||||||| | ||||||||||||||| |||||| |||||||||||    
T  37094842 caaattagcactagagagaatcaaatgtgagaccttgaggaggatcacacttccagatcccaa 37094780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 279929 - 280005
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||| ||||||||||||| ||||||||  || || ||||||| |||||||| ||||||||| ||||||||||||||    
T  279929 agcccacccaaattggcaccggagagaattgaacctgagaccttaaggaggagtacactccca-atcccaagccaata 280005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 9183166 - 9183231
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagat 257  Q
    |||||| |||||||| ||||||||| |||| || || |||| ||||||||||||||||||||||||    
T  9183166 agcccacccaaattgacaccagagataatcgaacctgagactttgaggaggagcacactcccagat 9183231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 262
Target Start/End: Complemental strand, 22696408 - 22696348
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 262  Q
    ||||||||||||||| |||||||| || ||||||||| |||||||||||||| |||||||||    
T  22696408 aaattggcaccagagggaatcaaacctgagaccttga-gaggagcacactccaagatcccaa 22696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 23552210 - 23552142
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||||||  |||||||||| ||  | ||||||||||||||||||||||||||| ||||||| |||||    
T  23552210 aaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaata 23552142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 270
Target Start/End: Complemental strand, 30442567 - 30442511
Alignment:
Q  214 agagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||| || || |||||||||||||||||| |||||||| ||||||||||||||    
T  30442567 agagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaatac 30442511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 31835284 - 31835192
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    ||||||||||||| || |||| || || |||||||||||||||||||||||| ||  |||||||||| | || ||||| |||||| |||||||    
T  31835284 aaattggcaccagggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 43590998 - 43590930
Alignment:
Q  202 aattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| || ||||||| || || |||| |||||||||||||||||||||  ||||||||||||||    
T  43590998 aattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaatac 43590930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 4566406 - 4566481
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||| |||||||||||||||||||||||| || |||||||||| ||||  ||||||| || ||| ||| ||||||    
T  4566406 ccatctaaattggcaccagagagaatcaaacctgagaccttgagaaggaatacactccaaggtccgaagtcaatac 4566481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 21558220 - 21558173
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcaca 248  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||    
T  21558220 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 33869428 - 33869523
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac-atcaggcaaacccatgtgggttat 294  Q
    ||||||| |||||||||||||| || |  |||||||||| ||||||||||| |||| || ||||||||||| |  |||| |||||| |||||||||    
T  33869428 caaattgacaccagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggttat 33869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 9871280 - 9871334
Alignment:
Q  211 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcc 265  Q
    ||||||||||| ||||| |||| | ||||||||||||||||||| ||||||||||    
T  9871280 cagagagaatcgaatctgagacttcgaggaggagcacactcccaaatcccaagcc 9871334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 19553554 - 19553477
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | ||||||| ||| | ||||||  || |||||||||||||||||||||||||||||| | ||||||||||||    
T  19553554 agcccacctaaattggaaccggggagaattgaacctaagaccttgaggaggagcacactcccaggt-ccaagccaatac 19553477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 24438222 - 24438300
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| ||||||| |||||||||||||| ||||| | ||||| || | |||||||||||||  |||||| |||||||    
T  24438222 agcccattcaaattgacaccagagagaatcgaatctgaaaccttaagaaagagcacactcccaagtcccaaaccaatac 24438300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 266
Target Start/End: Original strand, 41519085 - 41519159
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    |||||| |||||||| |||| |||| |||| ||||| |||||||||| ||||||||||||  | |||||||||||    
T  41519085 agcccacccaaattgacaccggagataatcgaatctgagaccttgagaaggagcacactcttaaatcccaagcca 41519159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 2446409 - 2446308
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| | |||| |||||| ||||||||| ||  | ||| || |||||||||||||||||||  ||||||||||||| |||||| | |||||| |||||    
T  2446409 agcccacctaaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtggg 2446310  T
Q  291 tt 292  Q
    ||    
T  2446309 tt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 25021347 - 25021388
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||| |||||||||||||||||||||| ||||||||||||||    
T  25021347 agactttgaggaggagcacactcccaggtcccaagccaatac 25021388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 25590675 - 25590634
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||||||||||||||||||||| |||||||||||    
T  25590675 agacctcgaggaggagcacactcccagatctcaagccaatac 25590634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 254
Target Start/End: Original strand, 27313718 - 27313771
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    ||||||||| ||||||||||| ||||| | |||||||||||||||| |||||||    
T  27313718 aaattggcatcagagagaatcgaatctgaaaccttgaggaggagcaaactccca 27313771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 410 - 455
Target Start/End: Original strand, 35123179 - 35123224
Alignment:
Q  410 taccttatagacttgagcaggaaaccagaagcgaccagtctcaagg 455  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||||    
T  35123179 taccttataaacttgagcaggaaaccagaattgaccagtctcaagg 35123224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 237 - 270
Target Start/End: Complemental strand, 48771994 - 48771961
Alignment:
Q  237 aggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||||||||||||||||||||    
T  48771994 aggaggagcacactcccagatcccaagccaatac 48771961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 2883051 - 2882991
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||| | |||||| |||||||||||||  || || ||||||||||||||||||||||||    
T  2883051 agcccacctaaattgccaccagagagaattgaacctgagaccttgaggaggagcacactcc 2882991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 267
Target Start/End: Original strand, 12211642 - 12211713
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||| |||||||||||||||  ||||||| || ||| |||||| ||||||||||||| |||||| |||||||    
T  12211642 ccatcgaaattggcaccagaggaaatcaaacctgagatcttgag-aggagcacactccaagatcctaagccaa 12211713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 26703189 - 26703149
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||| ||| ||||||||||||||||||||||||||||||    
T  26703189 agacctcgagaaggagcacactcccagatcccaagccaata 26703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 269
Target Start/End: Original strand, 37233584 - 37233624
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    ||||||| |||||||||||||||||| ||||||||||||||    
T  37233584 agaccttaaggaggagcacactcccacatcccaagccaata 37233624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 42836016 - 42836080
Alignment:
Q  232 ccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttatt 295  Q
    ||||||||| |||||||||||||| ||||||||||||| ||  |||| |||||| ||||||||||    
T  42836016 ccttgaggaagagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttatt 42836080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 48079736 - 48079668
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    |||||| ||||| |||||||||||| || |||||| ||| |||| ||||| ||||| ||||||||||||    
T  48079736 caaattagcaccggagagaatcaaacctgagacctcgagcaggaccacacacccaggtcccaagccaat 48079668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 2751368 - 2751294
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||| ||||| || || |||||||  ||||||||| ||||| ||||||||||||||    
T  2751368 agcccaccgaaattggcaccagagggaatcgaacctgagaccttt-ggaggagcaaactccaagatcccaagccaa 2751294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 3280464 - 3280538
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||| ||||||||||| | || |||| ||| | ||||||||||||||||||||||| | | ||||||||||||||    
T  3280464 ccatctaaattggcaccggggataatcgaat-tgagaccttgaggaggagcacactctcgggtcccaagccaatac 3280538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 17113888 - 17113817
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 271  Q
    |||||| ||| ||||||||||| ||  | ||||||||||||| ||||||||||||| | | |||||||||||    
T  17113888 caaattagcatcagagagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaataca 17113817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 270
Target Start/End: Original strand, 25956279 - 25956345
Alignment:
Q  203 attggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||| |||||| ||||||  || ||||||||||||| ||||||||||||| || ||||||||||||||    
T  25956279 attgacaccagggagaattgaacctaagaccttgag-aggagcacactccaaggtcccaagccaatac 25956345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 268
Target Start/End: Complemental strand, 28647057 - 28646991
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    ||||||||||||||| ||||| || || ||||||||| ||| |||||||||| |||||||||| ||||    
T  28647057 aaattggcaccagagggaatcgaacctgagaccttga-gagaagcacactccaagatcccaagtcaat 28646991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 37162333 - 37162396
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    |||||||||||||||||||||| ||  | |||||||||| || |||||||||||| ||| ||||    
T  37162333 caaattggcaccagagagaatcgaacttgagaccttgagaagaagcacactcccaaatctcaag 37162396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 211 - 270
Target Start/End: Original strand, 41519258 - 41519317
Alignment:
Q  211 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| | || || |||||||||||||||||||||||| | |||||||| ||||||    
T  41519258 cagagagaagcgaacctgagaccttgaggaggagcacactcctaaatcccaagtcaatac 41519317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 2962552 - 2962482
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||  |||||||||||| || || ||| ||||||||||||||||||| ||| | |||| |||||||    
T  2962552 caaattggttccagagagaatcgaacctgagatcttgaggaggagcacactcacaggttccaaaccaatac 2962482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 267
Target Start/End: Complemental strand, 5934177 - 5934147
Alignment:
Q  237 aggaggagcacactcccagatcccaagccaa 267  Q
    |||||||||||||||||||||||||||||||    
T  5934177 aggaggagcacactcccagatcccaagccaa 5934147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 262
Target Start/End: Original strand, 13106765 - 13106826
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 262  Q
    |||||| ||| ||||||||||| || || |||||||||||||||| ||||| |||||||||||    
T  13106765 caaattagcatcagagagaatcgaacctgagaccttgaggaggagtacact-ccagatcccaa 13106826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 45709683 - 45709761
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | ||||||| | | |||| |||| || || |||||| |||||||||||||||| |||||||||||| |||||    
T  45709683 agcccacctaaattggtatcggagataatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaatac 45709761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 7801244 - 7801203
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| ||||||||||||||||| ||||||| ||||||    
T  7801244 agaccttgaagaggagcacactcccaggtcccaagtcaatac 7801203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 270
Target Start/End: Original strand, 15905693 - 15905726
Alignment:
Q  237 aggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||||| ||||||||||||||    
T  15905693 aggaggagcacactcccaggtcccaagccaatac 15905726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 20952145 - 20952202
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||| |||| ||||| |||  |||||||||||||||||||||| |||||| |||||||    
T  20952145 gagataatcgaatctgagattttgaggaggagcacactcccaggtcccaaaccaatac 20952202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 23301585 - 23301678
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    |||||| |||| | |||||||||||  | ||||||  ||||||||||||||||||  ||||||| ||||| || ||||| |||||| |||||||    
T  23301585 caaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 28236593 - 28236634
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||| ||||||||| ||||||||||||||    
T  28236593 agacctcgaggaggagcgcactcccaggtcccaagccaatac 28236634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 49050475 - 49050544
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| | ||||||| || || ||||||  |||||||| |||||| |||||||||||| |||||    
T  49050475 aaattggcaccggggagaatcgaacctgagacctcaaggaggagtacactcgcagatcccaagctaatac 49050544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 11700257 - 11700190
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    ||||||||||| |||||||||| || || |||||||||||||||||| |||| ||  || |||||||||    
T  11700257 caaattggcac-agagagaatcgaacctgagaccttgaggaggagcaaactctcaagtctcaagccaat 11700190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 18056750 - 18056810
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||| ||||||| ||||| | ||||||| || || ||||||| ||||||||||||||||    
T  18056750 agcccacccaaattagcaccggggagaatcgaacctgagaccttcaggaggagcacactcc 18056810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 269
Target Start/End: Complemental strand, 30217943 - 30217903
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||||||||||||||||||| ||||||  ||||||||||    
T  30217943 agaccttgaggaggagcacacttccagatatcaagccaata 30217903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 37056308 - 37056237
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||| |||||||||||||||  |||| ||||| | ||||||| |||||||||||||| ||||| ||| ||||    
T  37056308 ccatcgaaattggcaccagaggaaatcgaatctcaaaccttga-gaggagcacactccaagatcacaaaccaa 37056237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 48039631 - 48039723
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    ||||||||||||| ||||||  || || |||||||| | ||||||| ||||| ||||| |||||||| | || ||||| |||||| |||||||    
T  48039631 aaattggcaccagggagaatagaacctgagaccttgcgaaggagcatactccaagatcgcaagccaacaccaccaggccaacccaagtgggtt 48039723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 2e-22; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 14495780 - 14495858
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||| ||||||||| | ||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||    
T  14495780 agcccatctaaattggcatcggagagaatcaaatctgagacctcgaggaggagcacactcccagatcccaagtcaatac 14495858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 293
Target Start/End: Complemental strand, 29075882 - 29075780
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||||| ||||||||||||||||||||| ||  | ||| || |||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||    
T  29075882 agcccatctaaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtggg 29075783  T
Q  291 tta 293  Q
    |||    
T  29075782 tta 29075780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 34984899 - 34984829
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||||||||||    
T  34984899 caaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaatac 34984829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 43442297 - 43442219
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||| || ||||||||||| || || |||||||||||||||||||||||||||||| ||| |||||||    
T  43442297 agcccatccaaattgacaacagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaatac 43442219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 14285254 - 14285186
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||||||||| | ||||||||||    
T  14285254 caaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaat 14285186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 7918452 - 7918547
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 294  Q
    |||||||||||||||||||||| || |||||||||||||||||||  ||||||||| | ||||||||||| ||  |||| |||||| |||||||||    
T  7918452 caaattggcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactaggccaacccaagtgggttat 7918547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 18595984 - 18596054
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||| |||| || ||||||||||||||||||||||| |||||| || |||||||||||    
T  18595984 caaattggcaccagagaaaatcgaacctaagaccttgaggaggagcacattcccaggtcacaagccaatac 18596054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 29692368 - 29692439
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| | |||||||| ||| || |||| ||||||||||||||||||||||||||||| |||||||    
T  29692368 ccaaattggcatcggagagaattaaacctgagactttgaggaggagcacactcccagatcccaatccaatac 29692439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 16773908 - 16773830
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | ||||||||| ||||||||||| || || |||||| |||||||||||||||||||| ||||||| ||||||    
T  16773908 agcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaatac 16773830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 25627150 - 25627080
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| |||||||||||||| || || ||||||||||||||||||||||||||  | ||||||||||||    
T  25627150 caaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaatac 25627080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 37258349 - 37258419
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| |||||||||||||| || || | |||||||||||||||||||||| ||||||||||| |||||    
T  37258349 caaattgacaccagagagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaatac 37258419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 17028239 - 17028318
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 271  Q
    |||||| | |||||| ||| |||| |||||||| || ||||||||||||||||||||||||||  |||||| ||||||||    
T  17028239 agcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaacccaataca 17028318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 211 - 270
Target Start/End: Complemental strand, 27596409 - 27596350
Alignment:
Q  211 cagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| |||||||||||| ||||||||| |||||| |||||||||||| |||||    
T  27596409 cagagagaatcgaatctaagacctcgaggaggaggacactctcagatcccaagctaatac 27596350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 84925 - 84851
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    |||||| ||| | ||||||| | ||||||| ||  | ||||||||||||||||||||||||||||||||||||||    
T  84925 agcccacccataatggcaccggggagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 217 - 270
Target Start/End: Original strand, 87423 - 87476
Alignment:
Q  217 gaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||| || ||||||||||||||||||||||||||||| ||||| ||||||    
T  87423 gaatcaaacctgagaccttgaggaggagcacactcccagattccaaggcaatac 87476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 21589389 - 21589288
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| | ||||||||||||||| ||||| || || |||| | |||||| |||| |||||||| ||||||||||||| || ||||| |||||| |||||    
T  21589389 agcccacctaaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtggg 21589290  T
Q  291 tt 292  Q
    ||    
T  21589289 tt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 30883210 - 30883251
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  30883210 agaccttgaggaggagcacactcccaggtcccaagccaatac 30883251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 265
Target Start/End: Complemental strand, 31074324 - 31074260
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcc 265  Q
    ||||||||||||||||||||| || || ||| ||||||||||| |||||||| | ||||||||||    
T  31074324 aaattggcaccagagagaatcgaacctgagatcttgaggaggaacacactccaaaatcccaagcc 31074260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 21086811 - 21086748
Alignment:
Q  196 catccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcc 259  Q
    |||| |||||| ||||||||| |||| ||||| ||| |||||||||||||||||| ||||||||    
T  21086811 catctaaattgacaccagagataatcgaatctgagatcttgaggaggagcacactgccagatcc 21086748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 38631065 - 38631139
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||||| ||||||||||||||| ||||| ||||| ||||| |  ||||||||| ||||| ||||||||||||||    
T  38631065 agcccatcgaaattggcaccagagggaatcgaatctgagacc-tctggaggagcaaactccaagatcccaagccaa 38631139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 213 - 264
Target Start/End: Original strand, 39327086 - 39327137
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 264  Q
    ||||||||| || |||||||||||||||||||||||||||||  ||||||||    
T  39327086 gagagaatcgaagctaagaccttgaggaggagcacactcccatgtcccaagc 39327137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 8278250 - 8278352
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| | |||| |||||| |||| |||||||  | ||| || |||||||||||||||||||  ||||||||||||| |||||| | |||||| |||||    
T  8278250 agcccacctaaatcggcaccggagataatcaaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtggg 8278349  T
Q  291 tta 293  Q
    |||    
T  8278350 tta 8278352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 16457903 - 16457833
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||| | ||||||  ||  | |||||||||||||||||||||||| || ||||||||||||||    
T  16457903 caaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaatac 16457833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 21549120 - 21549190
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| ||||| |||| ||  | |||| || ||||||||||||||||||| ||||||||||||||    
T  21549120 caaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaatac 21549190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 215 - 269
Target Start/End: Original strand, 41165627 - 41165681
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    ||||||| |||||||||| | ||| ||||||||||||||||||||||||| ||||    
T  41165627 gagaatcgaatctaagacttcgagaaggagcacactcccagatcccaagctaata 41165681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 22020858 - 22020915
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| ||||| |||| |  |||||||||||||||||||||||||||| |||||    
T  22020858 gagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaatac 22020915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 212 - 269
Target Start/End: Complemental strand, 25979251 - 25979194
Alignment:
Q  212 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||||||| || || |||||||||||||||| ||||||||| || |||||||||||    
T  25979251 agagagaatcgaacctgagaccttgaggaggagaacactcccaaattccaagccaata 25979194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 196 - 269
Target Start/End: Original strand, 43230753 - 43230826
Alignment:
Q  196 catccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||| |||||| ||| |||||||||  ||||| ||| ||| ||||||||||||||| |||| ||||||||||||    
T  43230753 catctaaattgacacaagagagaattgaatctgagatcttaaggaggagcacactctcagaacccaagccaata 43230826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 1410645 - 1410712
Alignment:
Q  202 aattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||| ||||| |||||||| || || |||||| ||||||||||||||||||| |||||||| ||||||    
T  1410645 aattgacaccacagagaatcgaa-ctgagacctcgaggaggagcacactcccatatcccaagtcaatac 1410712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 17761332 - 17761408
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||  |||||||| |  |||| || |  ||||||||||||||||||||||||||||| ||||    
T  17761332 cccatctaaattggcaccgaagagaatcgatcctaaaacttcaaggaggagcacactcccagatcccaagccgatac 17761408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 8484765 - 8484839
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||| |||||||| || ||||| |  ||||||||| ||||| ||||||||||||||    
T  8484765 agcccaccgaaattggcaccagagggaatcaaacctgagacc-tctggaggagcaaactccaagatcccaagccaa 8484839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 247
Target Start/End: Complemental strand, 17155915 - 17155868
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcac 247  Q
    |||||||||| || ||||||||||| || |||||||||||||||||||    
T  17155915 caaattggcagcacagagaatcaaacctgagaccttgaggaggagcac 17155868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 26078034 - 26078104
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| |||||||||| || || ||||||||| ||| |||| |||||||  |||||| |||||||    
T  26078034 caaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaatac 26078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 30000208 - 30000142
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||| |||||||| || || || |||||| ||||||| ||| |||||| |||||||||||||    
T  30000208 aaattggcatcagagagagtcgaacctgagacctcgaggaggtgcatactcccggatcccaagccaa 30000142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 4793100 - 4793141
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||||||||| |||||| |||||||    
T  4793100 agacctcgaggaggagcacactcccaggtcccaaaccaatac 4793141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 5156108 - 5156161
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccc 253  Q
    ||||||| |||||||||||||| ||||| ||||||| || || |||||||||||    
T  5156108 caaattgacaccagagagaatcgaatctgagaccttcagaagaagcacactccc 5156161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 16436681 - 16436641
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  16436681 agaccttgaggaggagcacactccaag-tcccaagccaatac 16436641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 18206621 - 18206686
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagat 257  Q
    |||||| |||||||||||| ||||||| || |||||   ||||  |||||||||||||||||||||    
T  18206621 agcccacccaaattggcactagagagagtcgaatctggaacctaaaggaggagcacactcccagat 18206686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Original strand, 18989017 - 18989078
Alignment:
Q  233 cttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 293  Q
    ||||| |||||||||||||| || ||||||||||| | ||||| ||||||||| ||||||||    
T  18989017 cttgaagaggagcacactccaaggtcccaagccaacaccatcatgcaaacccaagtgggtta 18989078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 257
Target Start/End: Original strand, 27840994 - 27841059
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagat 257  Q
    ||||||||||||||  |||||||||||||| || |  ||| || ||||||||||||||| ||||||    
T  27840994 agcccatccaaattaacaccagagagaatcgaaccggagatctcgaggaggagcacacttccagat 27841059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 268
Target Start/End: Complemental strand, 12877794 - 12877718
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    |||||| | ||||| | ||||||||||||| || || |||| |||||||| | |||||||||| ||||||| |||||    
T  12877794 agcccacctaaattagtaccagagagaatcgaacctgagacattgaggagaaacacactcccaaatcccaaaccaat 12877718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 18974053 - 18974005
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcaca 248  Q
    |||||||||||||| ||||||| || || | ||||||||||||||||||    
T  18974053 caaattggcaccagggagaatcgaacctgacaccttgaggaggagcaca 18974005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 293
Target Start/End: Original strand, 31669014 - 31669101
Alignment:
Q  206 ggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 293  Q
    |||||| | ||||||| || |||||||||||| |||||||| ||||| || ||||||||||| | |||||| | |||||| ||||||||    
T  31669014 ggcaccggggagaatcgaacctaagaccttga-gaggagcagactccaaggtcccaagccaacaccatcagaccaacccaagtgggtta 31669101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 2e-22; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 37109334 - 37109404
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || || ||||||||||||||||||||||||||| ||||||||||||||    
T  37109334 caaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaatac 37109404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 38869861 - 38869791
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||| ||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  38869861 caaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 38869791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 28635797 - 28635726
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    |||||| ||||||||||||||||||||||| || |||||||||  |||||||||||||||||||||||||||    
T  28635797 agcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaag 28635726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 37274443 - 37274510
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    ||||| ||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||    
T  37274443 aaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 53496971 - 53496900
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| |||||| |||||||    
T  53496971 ccaaattggctccagagagaatcaaatctgagactttgaggaggagcacactcccaggtcccaaaccaatac 53496900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 4249270 - 4249200
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||| | |||||||||| ||||    
T  4249270 caaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctatac 4249200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 23378049 - 23377980
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    ||||||||||| |||||||||| || || ||||||||||||||||||||||||||| |||||||||||||    
T  23378049 caaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 7949429 - 7949507
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | |||||| |||||||||||||| || || |||||||||||||||||||||||| || ||||||||||||||    
T  7949429 agcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatac 7949507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 31759641 - 31759711
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||| |||||| |||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  31759641 caaattggtaccagaaagaatcgaatctgagaccttgaggaggagcacactcccaagtcccaagccaatac 31759711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 19680772 - 19680841
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||||||| || ||||||||||||||| |||||||||||||  |||||||| |||||    
T  19680772 aaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaatac 19680841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 51250497 - 51250598
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| ||||||||||||| ||| ||||| ||  | ||| ||||||| ||||||||||||||||||||||||||||| || ||||| |||||| |||||    
T  51250497 agcccacccaaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtggg 51250596  T
Q  291 tt 292  Q
    ||    
T  51250597 tt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 201 - 268
Target Start/End: Original strand, 2622379 - 2622446
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    ||||||||||||||||||||| || || |||| | |||||||||||||||||||| ||||||||||||    
T  2622379 aaattggcaccagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 7292781 - 7292851
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| |||||||||| || || |||| |||||||||||||||||||||| | ||||||||||||    
T  7292781 caaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaatac 7292851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 15180831 - 15180764
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || ||||||||||||   |||| |||||||||| ||||||||||||||    
T  15180831 caaattggcaccagagagaatcgaacctaagaccttga---ggagtacactcccaggtcccaagccaatac 15180764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 46295198 - 46295123
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| ||||||||||||| | ||||||| || || |||||||||||||||||||||||| |  |||||||||||    
T  46295198 agcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaa 46295123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 252
Target Start/End: Complemental strand, 51622585 - 51622526
Alignment:
Q  193 gcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    ||||| |||||||||||||||||||| || || || ||||||||||||||||||||||||    
T  51622585 gcccacccaaattggcaccagagagagtcgaacctgagaccttgaggaggagcacactcc 51622526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 1730472 - 1730542
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||||||||||||  ||||| |||| |||| ||||||||||||| ||| ||||||||||||||    
T  1730472 caaattagcaccagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaatac 1730542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 16581786 - 16581716
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||| |||  || || |||||||||||||||||| |||||||| | ||||||||||||    
T  16581786 caaattggcaccagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaatac 16581716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 293
Target Start/End: Original strand, 19238552 - 19238654
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| ||||||||| ||| | ||||||| || |  |||||| |||||||||||||||||||  ||||||||||||| || ||||| |||||| |||||    
T  19238552 agcccacccaaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtggg 19238651  T
Q  291 tta 293  Q
    |||    
T  19238652 tta 19238654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 269
Target Start/End: Complemental strand, 5450170 - 5450117
Alignment:
Q  216 agaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||| ||||| | ||||||||||||||||||||||||||| |||||||||||    
T  5450170 agaatcgaatctgaaaccttgaggaggagcacactcccagattccaagccaata 5450117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 52880234 - 52880165
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| ||||||||||||||||||| ||||||||||| ||||||| ||| | | || |||||||||    
T  52880234 aaattggcatcagagagaatcaaatctaaaaccttgaggagaagcacacccccgggttcctagccaatac 52880165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 55427175 - 55427276
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| |||||||||||||   ||||||| || || |||||| ||| ||||||| |||||||| ||||||||||||| || ||||| |||||| |||||    
T  55427175 agcccacccaaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtggg 55427274  T
Q  291 tt 292  Q
    ||    
T  55427275 tt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 269
Target Start/End: Original strand, 3743098 - 3743162
Alignment:
Q  205 tggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    ||||| ||||||||||| ||||||||| ||||||||||| |||||||  |||||||||| |||||    
T  3743098 tggcatcagagagaatcgaatctaagatcttgaggaggaacacactcttagatcccaagtcaata 3743162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 294
Target Start/End: Complemental strand, 46545809 - 46545709
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 293  Q
    ||||| |||||| || |||||| |||| ||||| ||| ||||||||||||||||||| ||| || |||||||||| ||  |||| |||||| ||||||||    
T  46545809 ccatctaaattgacatcagagaaaatcgaatctgagatcttgaggaggagcacactctcaggtctcaagccaataccactaggccaacccaagtgggtta 46545710  T
Q  294 t 294  Q
    |    
T  46545709 t 46545709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 8325354 - 8325429
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| |||||||| |||| | ||||||| || ||||||||||||||| ||||||||||| || || ||||||||    
T  8325354 agcccacccaaattgacaccggggagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaa 8325429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 230 - 292
Target Start/End: Original strand, 37720227 - 37720290
Alignment:
Q  230 gaccttgaggaggagcacactcccagatcccaagccaat-acatcaggcaaacccatgtgggtt 292  Q
    ||||||||||||| |||||||||||| |||||||||||| ||| ||||| |||||| |||||||    
T  37720227 gaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 266
Target Start/End: Complemental strand, 39509148 - 39509097
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    ||||||| || || |||||| |||||||||||||||||||||||||||||||    
T  39509148 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 39509097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 290
Target Start/End: Original strand, 40283961 - 40284060
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| | ||||||||||||   ||||||||| || |||||||||||||  |||||||||||  ||||||||||||| ||||| || |||||| |||||    
T  40283961 agcccacctaaattggcaccaagcagaatcaaaccttagaccttgaggagatgcacactcccaagtcccaagccaataccatcatgccaacccaagtggg 40284060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 48480809 - 48480872
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    ||||||| || || ||||||| |||||| |||||||||||||||| ||||||| ||||||||||    
T  48480809 caaattgacatcacagagaattaaatctgagaccttgaggaggaggacactccaagatcccaag 48480872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 254
Target Start/End: Complemental strand, 51969115 - 51969056
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    |||||||||||||||||||||||||   || || | ||||||||||||||||||||||||    
T  51969115 ccatccaaattggcaccagagagaaatgaacctgaaaccttgaggaggagcacactccca 51969056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 7093460 - 7093395
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||| ||||||||||||||| || |||| |||||||  ||||||||||||| ||||||||||||||    
T  7093460 aaatttgcaccagagagaatcgaacctaaaaccttgaa-aggagcacactccaagatcccaagccaa 7093395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 8030179 - 8030257
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| ||| |||| ||||| ||  | ||||||||||||||||||||||||||  ||||||||| ||||    
T  8030179 agcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctatac 8030257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 265
Target Start/End: Complemental strand, 8306583 - 8306513
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcc 265  Q
    |||||||||||| ||| |||||||||| ||  |||||| | |||||||||||||||||||| || ||||||    
T  8306583 ccatccaaattgacactagagagaatcgaacttaagacttcgaggaggagcacactcccaggtctcaagcc 8306513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 229 - 294
Target Start/End: Original strand, 9241037 - 9241103
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 294  Q
    |||||| ||| ||||||||||| |||||||||||||||||| || ||||| |||||| |||||||||    
T  9241037 agacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggttat 9241103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 11592136 - 11592206
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||  ||||||| |||| || ||||||||| |||||||||||||||| ||| ||||||| ||||||    
T  11592136 caaattggttccagagataatcgaacctaagacctggaggaggagcacactctcaggtcccaaggcaatac 11592206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 33632119 - 33632189
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| |||||||||||||| |  ||  ||||||||||||||||| ||||||| || ||||||||||||    
T  33632119 caaattgacaccagagagaatcgatcctgggaccttgaggaggagcatactcccatattccaagccaatac 33632189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 46329258 - 46329192
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcc 265  Q
    ||||||||||||| |  |||||| || || | ||||||||||||||||||||||||| |||||||||    
T  46329258 ccaaattggcaccgggaagaatcgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 8714771 - 8714702
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||   |||||||||||||| | ||||||||||||| ||| ||| |||||||||| |||||||    
T  8714771 aaattggcactgaagagaatcaaatctgaaaccttgaggaggaacacgctctcagatcccaaaccaatac 8714702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 13265092 - 13265161
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||| | |||||||||| ||||| | ||| | |||||||||||| |||||| ||||||||||||||    
T  13265092 aaattggctcaagagagaatcgaatctgaaaccataaggaggagcacattcccaggtcccaagccaatac 13265161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 194 - 251
Target Start/End: Complemental strand, 21375876 - 21375819
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactc 251  Q
    ||||||||||||| ||| ||| |||||| ||||| ||| |||||||||||||||||||    
T  21375876 cccatccaaattgacactagaaagaatcgaatctgagagcttgaggaggagcacactc 21375819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 33619298 - 33619229
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||  |||||||| || |||||||||  ||||||| ||| ||||||||||| ||||||||||    
T  33619298 aaattggcaccgaagagaatcgaacctaagacctcaaggaggaccacgctcccagatcctaagccaatac 33619229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 49576890 - 49576947
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| || || ||||||||||||||||||||||||||  ||| ||||||||||    
T  49576890 gagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaatac 49576947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 268
Target Start/End: Complemental strand, 51954215 - 51954139
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    |||||| |||||||| |||| |||| ||||||| || |||||| ||||||||||| |||||||  ||||||| ||||    
T  51954215 agcccacccaaattgacaccggagataatcaaacctgagacctcgaggaggagcatactcccaagtcccaagtcaat 51954139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 218 - 269
Target Start/End: Complemental strand, 12822043 - 12821992
Alignment:
Q  218 aatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||| ||||| |||||||||  |||||||||||||||||||||||| |||||    
T  12822043 aatcgaatctgagaccttgaacaggagcacactcccagatcccaagtcaata 12821992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 25852307 - 25852233
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||| ||||| || || |||||||  ||||||||| ||||| ||||||||||||||    
T  25852307 agcccaccgaaattggcaccagagggaatcgaacctgagaccttt-ggaggagcaaactccaagatcccaagccaa 25852233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 30938217 - 30938272
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| || || |||||| ||||||||||||||||| ||||||||| |||||||    
T  30938217 gagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaatac 30938272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 32992705 - 32992638
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||| |||| | ||||||| ||  | |||||||||||||||||||||||| || |||||||||||    
T  32992705 caaattgacaccggggagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 33992719 - 33992645
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||||||||| || |||||||| |  ||||||||| ||||| ||||||||| ||||    
T  33992719 agcccaccgaaattggcaccagagagaatcgaacctaagacc-tctggaggagcaaactccaagatcccaaaccaa 33992645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 40058956 - 40059030
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||||||||| || || ||||||  | |||||||| ||||| ||||||||||||||    
T  40058956 agcccaccgaaattggcaccagagagaatcgaacctgagacctcta-gaggagcaaactccaagatcccaagccaa 40059030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 267
Target Start/End: Complemental strand, 56410039 - 56409977
Alignment:
Q  204 ttggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||||||| ||||||| || || |||||||||| ||||||||||||| || |||||||||||    
T  56410039 ttggcaccagggagaatcgaacctgagaccttgag-aggagcacactccaaggtcccaagccaa 56409977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 266
Target Start/End: Original strand, 2185015 - 2185081
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    |||||||||| | ||||||||| || || |||| ||||| |||||||||||||||| | ||||||||    
T  2185015 caaattggcatcggagagaatcgaacctgagactttgagaaggagcacactcccaggttccaagcca 2185081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 194 - 252
Target Start/End: Original strand, 5795386 - 5795444
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||| ||||||||||||  | |||||||||| || |||||||||||||||||| |||||    
T  5795386 cccacccaaattggcactggggagaatcaaacctgagaccttgaggaggagcatactcc 5795444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 31826710 - 31826632
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| ||| | || ||||| ||  | ||||||||||||||||||||||| || |||||||||| ||||    
T  31826710 agcccacccaaattgacactaaagggaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctatac 31826632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 266
Target Start/End: Complemental strand, 38838898 - 38838824
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    |||||| | |||||| || | ||||||||| || ||||||||||||||||||||| ||||| ||| | |||||||    
T  38838898 agcccaccgaaattgccatcggagagaatcgaacctaagaccttgaggaggagcatactccaagagctcaagcca 38838824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 267
Target Start/End: Original strand, 47202435 - 47202473
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||||||||||||||||||| | |||||||||    
T  47202435 agaccttgaggaggagcacactcccaggttccaagccaa 47202473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 56236894 - 56236968
Alignment:
Q  196 catccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||| | |||  |||| |||||||| | || | |||||||||||||||| |||||||| ||||||    
T  56236894 catccaaattggcatcggaggaaatcgaatctaaggctttaaagaggagcacactcccatatcccaagtcaatac 56236968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 12793886 - 12793963
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||| | ||||||||||||||||||||| ||  ||| || | | ||| |||||||||| ||||||| |||||||||    
T  12793886 agcccacctaaattggcaccagagagaatcgaacttaatacttcgtggaagagcacactcacagatccgaagccaata 12793963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 13015519 - 13015450
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||| ||||||||| ||  | |||| | |||||||||||||||||||  ||||||||||||||    
T  13015519 aaattgacacctgagagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaatac 13015450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 14451755 - 14451792
Alignment:
Q  226 ctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    |||||||||||||||||||||||||| || ||||||||    
T  14451755 ctaagaccttgaggaggagcacactctcatatcccaag 14451792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 17618345 - 17618304
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||||||||| || |||||||||||    
T  17618345 agacctcgaggaggagcacactcccaggtctcaagccaatac 17618304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 24124039 - 24124108
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||  ||| |||| || || ||||||  ||||||| |||||||||| |||||||||||||||    
T  24124039 aaattggcaccgaagataatcgaacctcagacctcaaggaggaccacactcccaaatcccaagccaatac 24124108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 293
Target Start/End: Complemental strand, 44865426 - 44865333
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtta 293  Q
    ||||||||||  | ||||||| || ||||||||||||||||||||||||  | ||  | |||||||| | |||||||| |||||| ||||||||    
T  44865426 aaattggcacaggggagaatcgaacctaagaccttgaggaggagcacacatcaaggactcaagccaacaccatcaggccaacccaagtgggtta 44865333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 2732095 - 2732043
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggag 244  Q
    |||||| ||||||||||||| ||||||||| || || |||| |||||||||||    
T  2732095 agcccacccaaattggcaccggagagaatcgaacctgagactttgaggaggag 2732043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 248
Target Start/End: Original strand, 19229183 - 19229239
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcaca 248  Q
    |||||| ||||||||| ||||| ||||||| || || |||||| |||||||||||||    
T  19229183 agcccacccaaattggtaccagggagaatcgaacctgagacctcgaggaggagcaca 19229239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 21344880 - 21344817
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    |||||||||| ||||||||||||| || ||||||||||| | |||||||| |||||| |||||||    
T  21344880 agaccttgag-aggagcacactccaaggtcccaagccaacatcatcaggccaacccaagtgggtt 21344817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 294
Target Start/End: Complemental strand, 47044795 - 47044715
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 294  Q
    ||||||| || || |||||| ||||||||||| |||| ||||||||||| ||||| || ||||| || ||| |||||||||    
T  47044795 gagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggttat 47044715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 78)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 46518721 - 46518651
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||| |||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||    
T  46518721 caaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaatac 46518651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 4222233 - 4222164
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||    
T  4222233 aaattgacaccagagagaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaatac 4222164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 27093344 - 27093414
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||  | ||||||||||||    
T  27093344 caaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaatac 27093414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 30311399 - 30311329
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||| |||||||| || || ||||||||||||||||||||||||||||||||||||| ||||    
T  30311399 caaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctatac 30311329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 32651413 - 32651491
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||| |||||| ||| |||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  32651413 agcccatctaaattgacactagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaatac 32651491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 28703387 - 28703456
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||||||||||||||||||| || || ||||||||| |||||||||||||||||||||||||| ||||    
T  28703387 caaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaata 28703456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 292
Target Start/End: Original strand, 31520588 - 31520681
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat-acatcaggcaaacccatgtgggtt 292  Q
    ||||||| |||  |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||  || ||||| |||||| |||||||    
T  31520588 caaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 15048044 - 15048114
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||| |||| || || |||||||||||||||||||| |||||||||||||||| ||||    
T  15048044 caaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctatac 15048114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 28531033 - 28531111
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| |||||||||||||  |  ||||||||| ||||||||||| |||||||||||||||||||||||    
T  28531033 agcccacccaaattgacaccagagagaattgagcctaagacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 31608508 - 31608574
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||| || |||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  31608508 aaattagccccagagagaatcaaatctgagacctcgaggaggagcacactcccagatctcaagccaa 31608574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 3427536 - 3427593
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagat 257  Q
    ||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||    
T  3427536 caaattggcactagagagaatcgaatctgagaccttgaggaggagcacactcccagat 3427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 31788946 - 31789022
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||| |||||||| ||| ||||| ||||||| |||| |||| ||||||||||||||||||||||||||||||||||    
T  31788946 agcccacccaaattgacac-agagataatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaata 31789022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 10445122 - 10445190
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    |||||| ||||||||||||||| || || |||||| |||||||||||||||||||| ||||||||||||    
T  10445122 caaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 44069859 - 44069784
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||| || ||||||||| || |||||||||||||||||||||||| ||||| ||||||||    
T  44069859 agcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactccaagatctcaagccaa 44069784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 4844494 - 4844564
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||| ||||||||| |  || |||||| |||||||||||||||||||||||||||| ||||||    
T  4844494 caaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaatac 4844564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 4870190 - 4870260
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||| ||||||||| |  || |||||| |||||||||||||||||||||||||||| ||||||    
T  4870190 caaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaatac 4870260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 51903861 - 51903931
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| |||| ||||||||| || || |||||  |||||||||||||||||||||||||||||||||||    
T  51903861 caaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaatac 51903931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 53413038 - 53412968
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||  || || ||||||||||||||||||||||||||| |  |||||||||||    
T  53413038 caaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaatac 53412968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 27259254 - 27259185
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    ||||||| || |||||||||||||| || | |||| |||||||||||||||||||| |||||||||||||    
T  27259254 caaattgacatcagagagaatcaaacctgaaacctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 7975485 - 7975441
Alignment:
Q  226 ctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||||||||||||||||||||| ||||    
T  7975485 ctaagaccttgaggaggagcacactcccagatcccaagcctatac 7975441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 14339701 - 14339633
Alignment:
Q  202 aattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| || ||||||| || || |||| ||||||||||||||||||||| |||||||||||||||    
T  14339701 aattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaatac 14339633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 203 - 263
Target Start/End: Complemental strand, 39253787 - 39253727
Alignment:
Q  203 attggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    ||||||| ||||||||||| || || ||||||||| |||||||||||||||||||||||||    
T  39253787 attggcatcagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaag 39253727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 266
Target Start/End: Original strand, 44743832 - 44743904
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    |||| ||||||||||||  |||| |||| || || |||||| |||||||||||||||||||||||||||||||    
T  44743832 cccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 262
Target Start/End: Complemental strand, 2709471 - 2709408
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 262  Q
    ||||||||||| |||||||||||||| |||| |||| ||||||||||| ||| |||||||||||    
T  2709471 ccaaattggcatcagagagaatcaaacctaaaacctcgaggaggagcatacttccagatcccaa 2709408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 36720483 - 36720404
Alignment:
Q  191 cagcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| | |||||| ||| |||||||||| || || | |||| ||||||||||||||||||| |||||||||||||||    
T  36720483 cagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaatac 36720404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 47860856 - 47860778
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 271  Q
    ||||||||||||| | || ||||||||||| || || |||| ||||||||||||||||||| |||||| |||||||||||    
T  47860856 agcccatccaaatcgacagcagagagaatcgaa-ctgagactttgaggaggagcacactcctagatccaaagccaataca 47860778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 2667963 - 2667885
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | |||||| ||| ||||| |||| || || |||||| ||||| |||||||||||||||||||||||||||||    
T  2667963 agcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaatac 2667885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 16354879 - 16354945
Alignment:
Q  204 ttggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||| || || ||||| ||||||||||||||||| ||| | ||||||||||||    
T  16354879 ttggcaccagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaatac 16354945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 37788448 - 37788518
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| |||||||||| || || |||||||||||||||||||||||| || | ||||| ||||||    
T  37788448 caaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaatac 37788518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 47810719 - 47810781
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    |||||| ||||||||||||| |||||||||||| |  |||||||| |||||||||||||||||    
T  47810719 agcccacccaaattggcaccggagagaatcaaacccgagaccttgcggaggagcacactccca 47810781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 189 - 259
Target Start/End: Complemental strand, 51766999 - 51766929
Alignment:
Q  189 atcagcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcc 259  Q
    ||||| ||||||||||| | ||| ||||||||| ||||| | |||||||||| ||||||||||||||||||    
T  51766999 atcagaccatccaaattagtaccggagagaatcgaatctgaaaccttgaggaagagcacactcccagatcc 51766929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 53863852 - 53863917
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||||||||||||  || |||||||||||| |||||||||||||| || |||||||||||    
T  53863852 aaattggcaccagagagaattgaacctaagaccttga-gaggagcacactccaaggtcccaagccaa 53863917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 292
Target Start/End: Original strand, 10499084 - 10499185
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| |||||||| || | ||||||||| || || ||||||  |||| ||||| |||||||||||||||||||||| || ||||| |||||| |||||    
T  10499084 agcccacccaaattgacatcggagagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtggg 10499183  T
Q  291 tt 292  Q
    ||    
T  10499184 tt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 269
Target Start/End: Original strand, 11090164 - 11090217
Alignment:
Q  216 agaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||| || ||||||||| ||||||||||||| ||||||||||||||||||||    
T  11090164 agaatcgaaactaagacctcgaggaggagcacattcccagatcccaagccaata 11090217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 21960631 - 21960574
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| ||||| |||||| |||||||||||||||| ||| ||||||||||||||    
T  21960631 gagagaatcgaatctgagacctcgaggaggagcacactctcaggtcccaagccaatac 21960574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 4252509 - 4252574
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||||||| ||||||||  | ||||||||| |||||||||||||| ||||| ||||||||    
T  4252509 aaattggcaccagagggaatcaaacttgagaccttga-gaggagcacactccaagatctcaagccaa 4252574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 8075102 - 8075180
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| ||| |||| ||||| || || | ||||||||||||||||||||||||  ||||||||| ||||    
T  8075102 agcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactcccaagtcccaagcctatac 8075180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 13808863 - 13808937
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||||||||| ||  |||||||||  || || |||||| ||||||||||||||| |||||||||||| |||||    
T  13808863 ccatccaaattgacattagagagaattgaacctgagacctagaggaggagcacactgccagatcccaagtcaata 13808937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 14186748 - 14186671
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | |||||| |||| ||||||||| || || |||||||||||||||||||||| |||| ||||||| ||||||    
T  14186748 agcccacctaaattgacaccggagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagacaatac 14186671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 30232431 - 30232353
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||||||||||| ||||||||  || || ||||| |||||||||||||| | ||||||| ||| |||||||    
T  30232431 agcccaaccaaattggcaccggagagaatggaacctgagaccatgaggaggagcacagttccagatcgcaaaccaatac 30232353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 40063712 - 40063642
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||  ||||||||| ||  | ||||||| |||||||||| |||| ||||||||||||||||||    
T  40063712 caaattggcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatac 40063642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 47236946 - 47237024
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||||||||||| | ||||||| ||  | ||||||||| ||||||||||||||| | |||||| |||||||    
T  47236946 agcccacccaaattggcaccggggagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaatac 47237024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 16991634 - 16991565
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| | |||||||||||| || ||||||  | || ||| |||||||||||||||||||||||||    
T  16991634 aaattggcatcggagagaatcaaaactgagacctcaaagaagagtacactcccagatcccaagccaatac 16991565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 270
Target Start/End: Original strand, 47279416 - 47279457
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  47279416 agaccttaaggaggagcacactcccagatcccaagcaaatac 47279457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 5499391 - 5499483
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    ||||||||||| | ||||||  || || ||||||| ||||||||||||||| |||||| |||| ||||| || ||||| |||||| |||||||    
T  5499391 aaattggcaccggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Original strand, 17155057 - 17155101
Alignment:
Q  196 catccaaattggcaccagagagaatcaaatctaagaccttgagga 240  Q
    |||||||||||||||||||||||||| ||||| ||| ||||||||    
T  17155057 catccaaattggcaccagagagaatcgaatctgagatcttgagga 17155101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 28928896 - 28928932
Alignment:
Q  234 ttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||| ||||||||||||||||||    
T  28928896 ttgaggaggagcacactctcagatcccaagccaatac 28928932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 34062531 - 34062602
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggag--gagcacactcccagatcccaagccaata 269  Q
    |||||||||||||||||||||  || || |||||||||||||  ||||||||||||| ||  ||||||||||    
T  34062531 caaattggcaccagagagaattgaacctgagaccttgaggaggagagcacactcccaaatttcaagccaata 34062602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 40777113 - 40777054
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||| | |||||||||| ||||||||||||| || ||||||||| ||||||||||||||    
T  40777113 agcccaccgaaattggcactagagagaatcaaacctgagaccttga-gaggagcacactcc 40777054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 453
Target Start/End: Complemental strand, 12404106 - 12404067
Alignment:
Q  414 ttatagacttgagcaggaaaccagaagcgaccagtctcaa 453  Q
    ||||||||||||||||||||||||||||| ||||| ||||    
T  12404106 ttatagacttgagcaggaaaccagaagcggccagtttcaa 12404067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 254
Target Start/End: Original strand, 17108896 - 17108935
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  17108896 gagaatcaaacctgagaccttgaggaggagcacactccca 17108935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 19716298 - 19716223
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| |||||||| |||| | ||||||| || |  ||||||||||||||||||||||||  | |||||||||||    
T  19716298 agcccacccaaattgtcaccggggagaatcgaaccagagaccttgaggaggagcacactccatggtcccaagccaa 19716223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 272
Target Start/End: Complemental strand, 26158902 - 26158832
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatacat 272  Q
    |||||||||||| || |||| ||| || |||||||||| ||||||||||||| ||||| |||||||| ||||    
T  26158902 aaattggcaccaaagggaatgaaacctgagaccttgag-aggagcacactccaagatctcaagccaacacat 26158832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 30715842 - 30715772
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    |||||||||||||||||||  ||||||||| || || | || |||||||||||||||||||||  |||||||    
T  30715842 agcccatccaaattggcacg-gagagaatcgaacctgaaacattgaggaggagcacactcccaagtcccaag 30715772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 33899708 - 33899653
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    |||||||| ||||| |||||||| || || |||||| |||||||||||||||||||    
T  33899708 ccaaattgacaccaaagagaatcgaacctgagacctagaggaggagcacactccca 33899653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 270
Target Start/End: Complemental strand, 35415370 - 35415291
Alignment:
Q  191 cagcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||| ||||||||||||||| ||| |||||| ||  | || ||||||||| | |||||||| |||||||||| |||||||    
T  35415370 cagctcatccaaattggcactagaaagaatcgaacatgagcccttgaggatgggcacactctcagatcccaaaccaatac 35415291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 47454615 - 47454670
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| || || |||||| ||||||||||||||||| ||||| |||||||||||    
T  47454615 gagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaatac 47454670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 53234014 - 53234088
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||||||||| || || ||| |||  ||||||||| ||||| ||||||||||||||    
T  53234014 agcccaccgaaattggcaccagagagaatcgaacctgaga-cttctggaggagcaaactccaagatcccaagccaa 53234088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 8170773 - 8170695
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| ||||||||  |||| || || |||||||||| |||||||||||||||  |  |||||||||||    
T  8170773 agcccacccaaattgacaccagaggaaatcgaacctgagaccttgagtaggagcacactcccaagtttcaagccaatac 8170695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 9345245 - 9345295
Alignment:
Q  202 aattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    ||||| |||||| ||||||| || |||||||||| ||||||||||||||||    
T  9345245 aattgacaccagggagaatcgaacctaagacctttaggaggagcacactcc 9345295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 270
Target Start/End: Complemental strand, 9557377 - 9557343
Alignment:
Q  236 gaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||| ||||||||||||||||||    
T  9557377 gaggaggagcacactctcagatcccaagccaatac 9557343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 11612391 - 11612329
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    ||||||||||| | ||| ||| || || ||||||| ||||||||||||||||||| |||||||    
T  11612391 aaattggcaccggggagcatcgaacctgagaccttaaggaggagcacactcccagctcccaag 11612329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 270
Target Start/End: Complemental strand, 17554832 - 17554794
Alignment:
Q  232 ccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  17554832 ccttgaggaagagcacactcccaggtcccaagccaatac 17554794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 20501789 - 20501727
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 262  Q
    |||||||||||  ||||||||| || || ||||||| ||||||||||||||| ||| ||||||    
T  20501789 caaattggcactggagagaatcgaacctgagaccttaaggaggagcacactctcaggtcccaa 20501727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 8051315 - 8051214
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| | ||||||||||| ||| ||||| ||  | |||||| |||||| |||| ||| |||| ||||||||||||| || ||||| |||||| |||||    
T  8051315 agcccaactaaattggcaccggagggaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtggg 8051216  T
Q  291 tt 292  Q
    ||    
T  8051215 tt 8051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 8390729 - 8390680
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacact 250  Q
    |||||| ||| ||| |||||| |||||||||||||||||| |||||||||    
T  8390729 aaattgacactagaaagaatcgaatctaagaccttgaggaagagcacact 8390680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 12279543 - 12279607
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    |||||||||| ||||| |||||||||| ||| ||| | | |||||||||||||| |||||||||||    
T  12279543 aaattggcacgagagaaaatcaaatctgagatcttaaag-ggagcacactcccaaatcccaagcca 12279607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 271
Target Start/End: Complemental strand, 19154730 - 19154653
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 271  Q
    |||| |||||||| || || |||||||| || || ||||||| ||||||||||||||| |||  | ||||||||||||    
T  19154730 cccacccaaattgacatcaaagagaatcgaacctgagacctttaggaggagcacactctcaggcctcaagccaataca 19154653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 26482007 - 26481954
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    ||||||||| || |||| || |||||||||||||||||| ||| ||||||||||    
T  26482007 gagagaatcgaacctaaaactttgaggaggagcacactctcaggtcccaagcca 26481954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 26505345 - 26505414
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| ||||||||||||  || || ||| ||||| |||||||||||| ||| |||||||||| ||||    
T  26505345 aaattggtaccagagagaattcaacctcagatcttgaagaggagcacacttccatatcccaagcctatac 26505414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 254
Target Start/End: Complemental strand, 36010830 - 36010781
Alignment:
Q  205 tggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    ||||||||||||||||| ||  | |||| |||||||||||||||||||||    
T  36010830 tggcaccagagagaatcgaacttgagactttgaggaggagcacactccca 36010781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 51742448 - 51742380
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| || |||||| ||| | |||||||||||||||||| ||| || ||||| ||||||||||    
T  51742448 aaattggcacc-gaaagaatcgaatttgagaccttgaggaggagcagactaccggatcctaagccaatac 51742380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 18319181 - 18319221
Alignment:
Q  230 gaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||| ||||||||||||||||| |||||| |||||||    
T  18319181 gaccttgaagaggagcacactcccaggtcccaaaccaatac 18319221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 30257714 - 30257643
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||| |||||||||||| || ||||| || || |||||||  ||||||||| ||||| ||||||||||||||    
T  30257714 ccatcgaaattggcaccaaagggaatcgaacctgagaccttt-ggaggagcaaactccaagatcccaagccaa 30257643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 270
Target Start/End: Complemental strand, 42430400 - 42430357
Alignment:
Q  226 ctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||| ||||||||||||| |||||||||| ||||||    
T  42430400 ctaagaccttgag-aggagcacactccaagatcccaagtcaatac 42430357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 46553030 - 46552986
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgag 238  Q
    |||| |||||||||||| |||||||||| ||||| ||||||||||    
T  46553030 cccacccaaattggcactagagagaatcgaatctgagaccttgag 46552986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 260
Target Start/End: Original strand, 52769958 - 52770026
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatccc 260  Q
    |||||| | |||||| ||| | |||||||| || || ||||||  ||||||||||||||||||||||||    
T  52769958 agcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccagatccc 52770026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 54990780 - 54990728
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||| || || ||||||||||||||||||| |||| || |||||||||||    
T  54990780 gagaatcgaacctgagaccttgaggaggagcacgctccaaggtcccaagccaa 54990728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 8177165 - 8177235
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || || | ||||||||||||||||||||||||||||||||||||||||    
T  8177165 caaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaatac 8177235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 33700757 - 33700826
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||||||| || || ||||||||||||||||||||||||||||| ||||||||||||    
T  33700757 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaatac 33700826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 51814595 - 51814494
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| ||||||||||||| ||||||||| || || ||||||||||||||||||||||| |||||| |||| ||||| |||||||| |||||| |||||    
T  51814595 agcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtggg 51814496  T
Q  291 tt 292  Q
    ||    
T  51814495 tt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 2799955 - 2799885
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || || |||||||||||||||||||||||||||||| |||||| ||||    
T  2799955 caaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctatac 2799885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 15786303 - 15786373
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| ||||| |||||||| || || ||||||||||||||||||||||||||||||||||||||||||    
T  15786303 caaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 15786373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 52336749 - 52336827
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||| ||||||||| |||| || || ||| ||| ||||||||||||||||||||||||||||||||||    
T  52336749 agcccatccaaattgacaccagagataatcgaacctgagatcttaaggaggagcacactcccagatcccaagccaatac 52336827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 194 - 270
Target Start/End: Complemental strand, 10526922 - 10526846
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||| |||||||| | |||||||||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||    
T  10526922 cccacccaaattgactccagagagaatcgaatctgagaccttgaggaggagcaaactcccaggtcccaagccaatac 10526846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 294
Target Start/End: Original strand, 9165178 - 9165273
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggttat 294  Q
    |||||||||||||||||||||  || || |||| |||||||||||||||||||||| ||||||||||||| ||  |||| |||||| |||||||||    
T  9165178 caaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttat 9165273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 36371563 - 36371493
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||| ||||||||||| || || ||||||||||||||||||||||||||| | ||||||||||||    
T  36371563 caaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaatac 36371493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 21267977 - 21268046
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| |||||||||||||||| | ||||||| |||||||||||||||||||  ||||||||||||||    
T  21267977 aaattggaaccagagagaatcaaacccaagacctagaggaggagcacactcccaagtcccaagccaatac 21268046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 201 - 291
Target Start/End: Complemental strand, 44126487 - 44126396
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggt 291  Q
    |||||||||| |||||||||||||||| |||||| | |||||||||||||||||| ||||| | ||||| || ||||| |||||| ||||||    
T  44126487 aaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 8904507 - 8904437
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| ||  | ||||||||||||||||||||||| || |||||||| ||||||    
T  8904507 caaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatac 8904437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 289
Target Start/End: Complemental strand, 9964539 - 9964441
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat-acatcaggcaaacccatgtgg 289  Q
    |||||||| ||||| ||||  |||| ||||||| || |||| ||||||| |||||||||||||||||||||| |||| ||||||||| |||||| ||||    
T  9964539 agcccatcaaaattagcactggagataatcaaacctgagacattgaggaagagcacactcccagatcccaagtcaataacatcaggctaacccaagtgg 9964441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 11063649 - 11063579
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| |||||||||| || |||||||||||||||||| ||||||  ||| ||||||||||||||    
T  11063649 caaattggcactagagagaatcgaacctaagaccttgaggaggaacacactttcaggtcccaagccaatac 11063579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 262
Target Start/End: Complemental strand, 40810560 - 40810498
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 262  Q
    |||||||||||||||||||||| || || ||||||||| ||||| ||||||||||||||||||    
T  40810560 caaattggcaccagagagaatcgaacctgagaccttgaagaggaacacactcccagatcccaa 40810498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 6650687 - 6650618
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||| || || |||| ||||||||||||| |||||| ||||||||||||||||    
T  6650687 aaattgacaccagagagaatcgaacctgagacattgaggaggagcatactccccgatcccaagccaatac 6650618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 18459214 - 18459282
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    |||||| ||||  ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||    
T  18459214 caaattagcacatgagagaatcaaatctaagacctcaaggaggagcacactcccaagtcccaagccaat 18459282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 194 - 292
Target Start/End: Original strand, 19528306 - 19528403
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    |||||||||||||  ||| | ||||||| || || |||||||||||||||||||||||  |||||||||||||||| || ||||| |||||| |||||||    
T  19528306 cccatccaaattg--accggggagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 41508907 - 41508831
Alignment:
Q  217 gaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    |||| |||||| |||||||||||||||||||||||||||||||||| ||| || || ||||| |||||| |||||||    
T  41508907 gaattaaatctgagaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtt 41508831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 263
Target Start/End: Original strand, 22049811 - 22049874
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    ||||||| |||||||||||||| ||||| | ||||||||||| ||||||||| |||||||||||    
T  22049811 caaattgacaccagagagaatcgaatctcaaaccttgaggagaagcacactctcagatcccaag 22049874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 31794239 - 31794317
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaa-tctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| |||||||| ||||| || |||| |||||||||||||||||||||||||  ||||||||||||||    
T  31794239 agcccacccaaattgacaccagagggaatcgaactcta-gaccttgaggaggagcacactcccaagtcccaagccaatac 31794317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 270
Target Start/End: Original strand, 44046162 - 44046201
Alignment:
Q  231 accttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44046162 accttgaggaggagcacactcccagatcccaagccaatac 44046201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 254
Target Start/End: Complemental strand, 3266017 - 3265963
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    |||||||| ||||||||||||| || || ||||||||||||||||||||||||||    
T  3266017 caaattggaaccagagagaatcgaacctgagaccttgaggaggagcacactccca 3265963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 6122895 - 6122817
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| ||| |||| ||||| || || ||||||||||||||||||||||||||  ||||||||| ||||    
T  6122895 agcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatac 6122817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 31383773 - 31383851
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||  |||||||| || || |||||   ||||||||||||||||||| ||||||||||||||    
T  31383773 agcccacccaaattggcacctaagagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaatac 31383851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 9643793 - 9643862
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||| |||| |||  ||||| |||||||||||| || ||||||||||||||||||||||||||    
T  9643793 aaattgacaccggagataattgaatctgagaccttgaggatgaacacactcccagatcccaagccaatac 9643862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 190 - 267
Target Start/End: Complemental strand, 39964607 - 39964531
Alignment:
Q  190 tcagcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||||| | ||||||||||||||| |||||||| || ||||||||| |||||||||||||| || || ||||||||    
T  39964607 tcagcccaccgaaattggcaccagagggaatcaaacctgagaccttga-gaggagcacactccaaggtcgcaagccaa 39964531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 209 - 270
Target Start/End: Complemental strand, 51703863 - 51703802
Alignment:
Q  209 accagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||| || || | || |||||||||||||||||||||||| ||||||||||||    
T  51703863 accagagagaatcgaacctgaaactttgaggaggagcacactcccagattccaagccaatac 51703802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 269
Target Start/End: Complemental strand, 4566640 - 4566572
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||| || ||||||||||| || || ||||| ||||||||||||||||||||| | |||||||||||    
T  4566640 aaattgacatcagagagaatcgaacctgagaccctgaggaggagcacactcccaggttccaagccaata 4566572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 4825065 - 4824997
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||| ||||||  |||||||||| || ||||||||| |||||||||||||| || |||||||||||    
T  4825065 ccaaattagcaccacggagaatcaaacctgagaccttgaagaggagcacactccaaggtcccaagccaa 4824997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 252
Target Start/End: Complemental strand, 45266935 - 45266875
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||||||||||||||||| | ||||||| || || |||||||||||||||||| |||||    
T  45266935 agcccatccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcaaactcc 45266875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 1247206 - 1247151
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccag 255  Q
    |||||||| ||||||||||||| || || |||||||||||||||| ||||||||||    
T  1247206 caaattggtaccagagagaatcgaacctgagaccttgaggaggagtacactcccag 1247151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 19940856 - 19940907
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    ||||||||||| |||||||||||| || ||||||| ||||||||||||||||    
T  19940856 aaattggcaccggagagaatcaaacctgagaccttaaggaggagcacactcc 19940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 31605823 - 31605898
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| ||||||||||||| | ||||||| ||  | |||||||||||||||||||||| | || |||||||||||    
T  31605823 agcccacccaaattggcaccggggagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaa 31605898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 36428813 - 36428738
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| ||||||||||||| | ||||||||||  | |||||||||||||||||| ||||| || | |||||||||    
T  36428813 agcccacccaaattggcaccggggagaatcaaacatgagaccttgaggaggagcatactccaaggtaccaagccaa 36428738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 51281445 - 51281394
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacact 250  Q
    |||||||||| || |||||||||||| || ||||||||||||||||||||||    
T  51281445 ccaaattggcgccggagagaatcaaacctgagaccttgaggaggagcacact 51281394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 1138663 - 1138598
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||||||| ||||||| || || |||||||||||| |||||||||||||| ||||| ||||||||    
T  1138663 aaattggcactagagagattcgaacctaagaccttga-gaggagcacactccaagatctcaagccaa 1138598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 207 - 269
Target Start/End: Complemental strand, 12587356 - 12587294
Alignment:
Q  207 gcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    ||||| ||||||||| || || |||||| |||||||||||||||| ||||||||||| |||||    
T  12587356 gcaccggagagaatcgaacctgagacctcgaggaggagcacactcacagatcccaagtcaata 12587294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 15904710 - 15904636
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    ||||||||||||| || ||||||||||| ||||| |||  ||||||||||| | |||||||| ||| ||||||||    
T  15904710 cccatccaaattgacatcagagagaatcgaatctgagattttgaggaggaggatactcccaggtcctaagccaat 15904636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 21547455 - 21547533
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | ||||||||| ||||||||||| || || | |||| |||||||||||| ||||||  ||||||||||||||    
T  21547455 agcccacctaaattggcatcagagagaatcgaacctgaaacctcgaggaggagcaccctcccatgtcccaagccaatac 21547533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 24730485 - 24730407
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||   ||| |||||| ||  |||||||| |||||||||||||||||||| |||| ||||||    
T  24730485 agcccacccaaattggcaccgaggaggatcaaacctgggaccttgaagaggagcacactcccagatctcaagacaatac 24730407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 27476746 - 27476824
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | |||| |||||||||||||||||||  | ||| || ||||||||||||||||| |  ||||||||||||||    
T  27476746 agcccacctaaatcggcaccagagagaatcaaacttgagatctcgaggaggagcacactcctaagtcccaagccaatac 27476824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 195 - 268
Target Start/End: Original strand, 1600270 - 1600343
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    |||||||||||| |||||||||||||| || || | || || |||||||||||||||||| ||| || ||||||    
T  1600270 ccatccaaattgacaccagagagaatcgaacctgaaactttaaggaggagcacactcccaaatctcaggccaat 1600343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 17297086 - 17297013
Alignment:
Q  192 agcccatccaaattggcaccagag-agaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 264  Q
    |||||| ||||||||||||| | | |||||||||  | |||||||||||||||||||||||| || ||||||||    
T  17297086 agcccacccaaattggcaccgggggagaatcaaacatgagaccttgaggaggagcacactccaaggtcccaagc 17297013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 17745240 - 17745309
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||| ||  | |||||| |||||||||||||| | ||| ||||||||||||||    
T  17745240 aaattgacaccagagagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaatac 17745309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 28411422 - 28411353
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||||||  ||||| ||||||  | ||||||||||||| || |||||||| ||||||    
T  28411422 aaattggcaccagagagaattgaatctgagacctcaaagaggagcacactctcatatcccaagtcaatac 28411353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 208 - 269
Target Start/End: Complemental strand, 31049698 - 31049637
Alignment:
Q  208 caccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||||||||||| ||  | ||| ||| |||||||||||||||| ||||||||||||||||    
T  31049698 caccagagagaatcgaagatgagatctttaggaggagcacactcctagatcccaagccaata 31049637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 40257500 - 40257399
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| |||||||| |||| || |||||  ||  | |||||| |||||||||||||||||||| || |||||||||| || ||||| |||||| |||||    
T  40257500 agcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtggg 40257401  T
Q  291 tt 292  Q
    ||    
T  40257400 tt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 268
Target Start/End: Complemental strand, 50901682 - 50901607
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    |||||| | ||||||||||  ||||||||| ||| | |||||| ||||||||||||||| |||| ||||||||||||    
T  50901682 agcccacctaaattggcact-gagagaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaat 50901607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 52116766 - 52116834
Alignment:
Q  202 aattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| || ||||||  || || |||| |||||||||||||||||||||  ||||||||||||||    
T  52116766 aattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaatac 52116834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 8077740 - 8077666
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||||||||| || || ||||| |  ||||||||| ||||| ||||||||||||||    
T  8077740 agcccaccgaaattggcaccagagagaatcgaacctgagacc-tctggaggagcaaactccaagatcccaagccaa 8077666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Complemental strand, 9879539 - 9879460
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaataca 271  Q
    |||||| |||||||| ||  ||||| |||| ||||| ||||||  |||| ||| |||||| |||||||||||||||||||    
T  9879539 agcccacccaaattgacataagagataatcgaatctgagacctcaaggaagagtacactctcagatcccaagccaataca 9879460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 12370243 - 12370192
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 264  Q
    ||||||||||||  | |||||| |||||||||||||||||||| ||||||||    
T  12370243 gagagaatcaaacatgagacctcgaggaggagcacactcccaggtcccaagc 12370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 215 - 270
Target Start/End: Complemental strand, 25297850 - 25297795
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||| || |||||| |||||||||||||||| ||||||| ||| ||||||    
T  25297850 gagaatcaaacctcagacctcgaggaggagcacactctcagatcctaagtcaatac 25297795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 30677269 - 30677195
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||| |||||||| || |||||||  ||||||||| ||||| ||||||||| ||||    
T  30677269 agcccaccgaaattggcaccagagggaatcaaacctgagacctt-tggaggagcaaactcctagatcccaaaccaa 30677195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Complemental strand, 34228974 - 34228900
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||| ||||||||| || || ||||||||| ||||| |||||||| || |||||||||||    
T  34228974 agcccaccaaaattggcaccggagagaatccaacctgagaccttga-gaggaacacactccgaggtcccaagccaa 34228900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 37400372 - 37400297
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||| || |||||| ||  | ||||||| ||||||||||||||  ||| || |||||||||||    
T  37400372 ccatccaaattggcaccggatagaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaatac 37400297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 42949276 - 42949327
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||| |||| ||||||||||||| | |||||| |||||||||||||||||    
T  42949276 aaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcc 42949327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 43446056 - 43445989
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||||||||| | ||||||| ||  | |||||||||||||||||||||||| ||  ||||||||||    
T  43446056 caaattggcaccggggagaatcgaacatgagaccttgaggaggagcacactccaaggacccaagccaa 43445989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 251
Target Start/End: Complemental strand, 44961866 - 44961807
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactc 251  Q
    |||||| |||||||| ||| |||||||||| || || ||||| |||||||||||||||||    
T  44961866 agcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactc 44961807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 1094626 - 1094548
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | ||||||||||| ||||||||| ||| | |||||| | |||||||||||||| ||| | ||||| ||||||    
T  1094626 agcccacctaaattggcaccggagagaatcgaatttgagacctcgtggaggagcacactcacaggttccaagtcaatac 1094548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 292
Target Start/End: Original strand, 16169992 - 16170054
Alignment:
Q  231 accttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    ||||||||||||| ||||||||||| ||||||| ||||| || ||||| |||||| |||||||    
T  16169992 accttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 16893487 - 16893417
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| |||| |||| |||| || || |||||| ||||||||| ||||||||| ||| |||||||||||    
T  16893487 caaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaatac 16893417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 17439997 - 17439951
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcc 259  Q
    ||||||||||||  | |||||| ||||||||||||||||||||||||    
T  17439997 gagagaatcaaacatgagacctcgaggaggagcacactcccagatcc 17439951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 202 - 252
Target Start/End: Original strand, 49101754 - 49101803
Alignment:
Q  202 aattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||||||||| | ||||||||| ||||||||||| ||||||||||||||    
T  49101754 aattggcaccagggggaatcaaatgtaagaccttga-gaggagcacactcc 49101803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 9500459 - 9500533
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagacct-tgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||||||||| || || |||||| |||  ||||||| ||||| ||||||||||||||    
T  9500459 agcccaccgaaattggcaccagagagaatcgaacctgagacctctga--aggagcaaactccaagatcccaagccaa 9500533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 242
Target Start/End: Complemental strand, 29753741 - 29753700
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggagg 242  Q
    ||||||||||||||||||||| || || ||||||||||||||    
T  29753741 aaattggcaccagagagaatcgaacctgagaccttgaggagg 29753700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 252
Target Start/End: Original strand, 32916785 - 32916838
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||||| || || ||| ||| ||| |||||||||||||||||||||||||||    
T  32916785 ccaaattgtcatcaaagaaaattaaacctaagaccttgaggaggagcacactcc 32916838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 42983358 - 42983427
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||| ||||||||| || ||  |||||  ||||||| |||||||||||||| |||| ||||||    
T  42983358 aaattggcacctgagagaatcgaacctcggacctcaaggaggaccacactcccagatctcaagtcaatac 42983427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 270
Target Start/End: Complemental strand, 47753778 - 47753737
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||| ||| |||||||||| ||||||    
T  47753778 agaccttgaggaggagcacagtcctagatcccaagtcaatac 47753737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 267
Target Start/End: Complemental strand, 952589 - 952537
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||| || || |||| ||||||| |||||||||||||| |||||||||||    
T  952589 gagaatctaacctgagactttgaggatgagcacactcccaggtcccaagccaa 952537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 267
Target Start/End: Original strand, 39714777 - 39714828
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||  | |||||||||| ||||||||||||| ||||||||||||||    
T  39714777 gagaatcaaacttgagaccttgag-aggagcacactccaagatcccaagccaa 39714828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 48615341 - 48615389
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    ||||||||||| | | |||||||| |||||||||||||||||| |||||    
T  48615341 gagaatcaaatttgaaaccttgagaaggagcacactcccagattccaag 48615389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 197 - 270
Target Start/End: Complemental strand, 11624 - 11551
Alignment:
Q  197 atccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||  |||||||||||||| || || |||||| |||||||||||||||||||||||||||||||||||    
T  11624 atccaaattaacaccagagagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaatac 11551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 9e-19; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 18392 - 18324
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    ||||||||||||||||||||||||| || | |||||||||||||||||| |||||||| ||||||||||    
T  18392 caaattggcaccagagagaatcaaacctgaaaccttgaggaggagcacaatcccagattccaagccaat 18324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 266
Target Start/End: Complemental strand, 222602 - 222536
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagcca 266  Q
    |||||||| |||| ||||||||||| || | ||||||||||||| |||| || ||||| ||||||||    
T  222602 caaattggtaccaaagagaatcaaacctgaaaccttgaggaggaacacaatctcagattccaagcca 222536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 13021 - 13099
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| || | ||||||||| || || |||||||||||||||||||||||||||||| |||||||||||    
T  13021 agcccacccaaattgacatcggagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagccaatac 13099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 3305163 - 3305241
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | |||||||||||||||| |||| ||| | ||||||||||||||||||| |||||||||||||| |||||||    
T  3305163 agcccacctaaattggcaccagagataatcgaatttgagaccttgaggaggagcacgctcccagatcccaaaccaatac 3305241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 18540391 - 18540321
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||||||| || || ||||||||||||| || |||||||||| ||||||||||||||    
T  18540391 caaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaatac 18540321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 6536612 - 6536543
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||||||  || || |||||||||||||||||||||||| || ||||||||||||||    
T  6536612 aaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatac 6536543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 200 - 269
Target Start/End: Complemental strand, 33017307 - 33017238
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||||||||||||||||||| || || |||||||||||||||||||||| |||| | |||||||||||    
T  33017307 caaattggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaata 33017238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 35690048 - 35690117
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||| || || |||||||||||||||||| || ||||||||||||||||||||    
T  35690048 aaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaatac 35690117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 11793496 - 11793568
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagc 264  Q
    |||||| ||||||||||||| |  ||||||||| ||||||||||||||||||||||||||| || ||||||||    
T  11793496 agcccacccaaattggcaccgggaagaatcaaacctaagaccttgaggaggagcacactccaaggtcccaagc 11793568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 268
Target Start/End: Original strand, 44780089 - 44780165
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    |||||| |||||||| ||| |||| |||||||| || ||||||||||||||||||||||||||  ||||||||||||    
T  44780089 agcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactcccaagtcccaagccaat 44780165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 968463 - 968385
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | ||||||||| | ||||||||| || || |||||| |||||||||||||||||||| ||||||||||||||    
T  968463 agcccacctaaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 968385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 2203593 - 2203515
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||||||||||| | ||||||  |  || ||||||||||||||||||||||||||| ||||||||||||||    
T  2203593 agcccacccaaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaatac 2203515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 23361624 - 23361702
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | |||||| |||||||||||||  || || |||||||||||||||||||||||||| |||||||| ||||||    
T  23361624 agcccacctaaattgacaccagagagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaatac 23361702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 268
Target Start/End: Complemental strand, 13129766 - 13129693
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    ||||||||||||||||||||||||||| || || | ||||||||||||||| ||||||||  |||||| |||||    
T  13129766 ccatccaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaat 13129693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 269
Target Start/End: Original strand, 43594293 - 43594370
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    ||||||||||||||| ||| |||||||||| || || ||||||||||||||| |||| ||| |||||| |||||||||    
T  43594293 agcccatccaaattgacactagagagaatcgaacctgagaccttgaggaggaacacattcctagatcctaagccaata 43594370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 270
Target Start/End: Complemental strand, 27750828 - 27750753
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||| ||| |||| ||||| || || ||||||||||||||||||||||||||  ||||||||| ||||    
T  27750828 ccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatac 27750753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 30483862 - 30483937
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||| ||||||||||| |||||||||  || || ||||  |||||||||||||||||||| |||||||||||||||    
T  30483862 ccattcaaattggcacaagagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaatac 30483937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 7140809 - 7140732
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| ||||||||  ||| ||||||||| ||||| ||| || |||||||||||||| ||||||||||||||||||||    
T  7140809 agcccacccaaattgatacc-gagagaatcgaatctgagagctcgaggaggagcacacacccagatcccaagccaatac 7140732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 11492048 - 11492126
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| |||   |||||||| || ||||||||| ||| ||||||||||||||||||| |||||||||||    
T  11492048 agcccacccaaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaagccaatac 11492126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 11819877 - 11819799
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| ||| |||| ||||| || || ||||||||||||||||||||||||||  ||||||||| ||||    
T  11819877 agcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctatac 11819799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 12988521 - 12988451
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||||| ||| || || | |||||||||||||||||||| |||| | ||||||||||||    
T  12988521 caaattggcaccagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaatac 12988451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 16852441 - 16852363
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | |||||||||| |  ||||||| || || |||||| |||||||||||||||||||| ||||||||||||||    
T  16852441 agcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 16852363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 201 - 263
Target Start/End: Complemental strand, 18128601 - 18128540
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaag 263  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||| | ||||||||||    
T  18128601 aaattggcaccagagagaatcgaatctaagaccttga-aaggagcacacttcaagatcccaag 18128540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 28783161 - 28783083
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||   ||||||| ||  | ||||||||||||||||||||||||||| || |||||||||||    
T  28783161 agcccacccaaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaatac 28783083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 3624660 - 3624603
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| || || ||||||||| ||||||||||||||||| ||||||||||||||    
T  3624660 gagagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaatac 3624603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 8794329 - 8794398
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| ||||||||||||| || || ||||| |||||||||||||||| |||| | ||||||||||||    
T  8794329 aaattggtaccagagagaatcgaacctgagaccctgaggaggagcacacttccaggttccaagccaatac 8794398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 202 - 270
Target Start/End: Original strand, 19703472 - 19703540
Alignment:
Q  202 aattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||| ||| || ||||||| || || ||||||||||||||||||||||| ||| ||||||||||||||    
T  19703472 aattgacactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaatac 19703540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 20994432 - 20994511
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgagg-aggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||| |||||||| |||| |  || |||| |||||| |||||||||||||||| ||||||| ||||||    
T  20994432 agcccatccaaattggtaccagagataatcgatcctgagactttgagggaggagcacactcccaggtcccaagtcaatac 20994511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 6436534 - 6436608
Alignment:
Q  196 catccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||   ||||| ||||| ||||| |||||||| ||||||||||||||| |  ||||||||||||||    
T  6436534 catccaaattggtttcagagggaatcgaatctgagaccttgcggaggagcacactcctaagtcccaagccaatac 6436608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 22193360 - 22193402
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccag 255  Q
    ||||||||| || ||||||||||||||||||||||||||||||    
T  22193360 gagagaatcgaacctaagaccttgaggaggagcacactcccag 22193402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 250
Target Start/End: Original strand, 33727848 - 33727906
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacact 250  Q
    ||||||||||||||| ||| |||| ||||| || || ||||||||||||||||||||||    
T  33727848 agcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacact 33727906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 226 - 267
Target Start/End: Original strand, 3524410 - 3524451
Alignment:
Q  226 ctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||||||||||||||||||| || |||||||||||    
T  3524410 ctaagaccttgaggaggagcacactccaaggtcccaagccaa 3524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 6569754 - 6569823
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    ||||||| ||||| |||||||| ||  | | ||||  |||||||||||||||||||||||||||||||||    
T  6569754 caaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatcccaagccaata 6569823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 262
Target Start/End: Original strand, 29915904 - 29915965
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaa 262  Q
    |||||||||| ||||| |||| ||| | |||||||||||||||||  |||||||||||||||    
T  29915904 aaattggcactagagaaaatcgaatatgagaccttgaggaggagcgtactcccagatcccaa 29915965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 30774720 - 30774789
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||| | |||| |||| ||||| |||||| |||||||| |||||| ||||||||||| |||||||    
T  30774720 aaattggcatcggagaaaatcgaatctgagacctcgaggaggaacacacttccagatcccaaaccaatac 30774789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 36205259 - 36205198
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaat-acatcaggcaaacccatgtgg 289  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||||| | |||||| ||||    
T  36205259 agaccttgaggaggagcacactcccagatctcaaaccaataacatcagaccaacccaagtgg 36205198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 24675491 - 24675555
Alignment:
Q  196 catccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatccc 260  Q
    ||||||||||  || |||||| |||| ||||| |||||||||| |||||||||||| ||||||||    
T  24675491 catccaaattaacatcagagaaaatcgaatctgagaccttgagaaggagcacactctcagatccc 24675555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 292
Target Start/End: Complemental strand, 26688929 - 26688865
Alignment:
Q  229 agaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    |||||||||||||||||||||||| || ||||||||||| | || ||||| |||||| |||||||    
T  26688929 agaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 213 - 269
Target Start/End: Complemental strand, 34628722 - 34628666
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    ||||||||| || || |||| |||||||| | |||||||||||||||||||||||||    
T  34628722 gagagaatcgaacctgagactttgaggagaaacacactcccagatcccaagccaata 34628666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 267
Target Start/End: Complemental strand, 35287810 - 35287742
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||||| ||||||||| ||  | | |||||||||||||||||||||| | ||| ||||||||    
T  35287810 ccaaattggcaccggagagaatcgaacatgataccttgaggaggagcacactccaaaatctcaagccaa 35287742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 272
Target Start/End: Original strand, 40136939 - 40137017
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatacat 272  Q
    |||||| | ||||||||||| | |||||||||| || |||||||||| ||||||||||||| || ||||||||||| ||||    
T  40136939 agcccaccgaaattggcaccgg-gagaatcaaacctgagaccttgag-aggagcacactccaaggtcccaagccaacacat 40137017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 3734727 - 3734801
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||| ||||| || || |||||||  ||||||||| ||||| ||||||||||||||    
T  3734727 agcccaccgaaattggcaccagagggaatcgaacctgagaccttt-ggaggagcaaactccaagatcccaagccaa 3734801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 270
Target Start/End: Complemental strand, 4436076 - 4435998
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||  |  ||||||||| | ||| ||||||||||||||||||| ||||||  || |||||||||||    
T  4436076 agcccacccaaattggggcaggagagaatcgagtctgagaccttgaggaggagcactctcccatgtctcaagccaatac 4435998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 254
Target Start/End: Original strand, 16843769 - 16843831
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactccca 254  Q
    |||||||| |||||| |||| ||||||||| || || ||| |||| |||||||||||||||||    
T  16843769 agcccatctaaattgacaccggagagaatcgaacctgagatcttgcggaggagcacactccca 16843831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 19471697 - 19471632
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||||||| |||||||| || ||||||   ||||||||| ||||| ||||||||||||||    
T  19471697 aaattggcaccagagggaatcaaacctgagacctct-ggaggagcaaactccaagatcccaagccaa 19471632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 267
Target Start/End: Complemental strand, 19542621 - 19542556
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||||||| |||||||| || ||||||   ||||||||| ||||| ||||||||||||||    
T  19542621 aaattggcaccagagggaatcaaacctgagacctct-ggaggagcaaactccaagatcccaagccaa 19542556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 201 - 267
Target Start/End: Original strand, 19590075 - 19590140
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    ||||||||||||||| |||||||| || ||||| |  ||||||||| ||||| ||||||||||||||    
T  19590075 aaattggcaccagagggaatcaaacctgagacc-tctggaggagcaaactccaagatcccaagccaa 19590140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 200 - 270
Target Start/End: Complemental strand, 29431104 - 29431034
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||| |||||||| || || || |||  ||||||||||||||||||  ||||||||||||||    
T  29431104 caaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaatac 29431034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 29858024 - 29858102
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | |||||||||||   | ||||| || || |||||| |||||||||||||||||| | ||||||||||||||    
T  29858024 agcccacctaaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaatac 29858102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 292
Target Start/End: Complemental strand, 8059725 - 8059632
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    ||||||| || ||| ||||||  || || ||||||||||||||| ||||||| || || ||||| ||||| |||||||| |||||| |||||||    
T  8059725 caaattgacatcagggagaatggaacctgagaccttgaggaggatcacactctcacatgccaagtcaataccatcaggccaacccaagtgggtt 8059632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 292
Target Start/End: Complemental strand, 8485100 - 8484999
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtggg 290  Q
    |||||| | ||||||||||| ||||||||| ||  | ||||||  | ||||||||||||| ||| |||||||| |||| || ||||| |||||| |||||    
T  8485100 agcccacctaaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtggg 8485001  T
Q  291 tt 292  Q
    ||    
T  8485000 tt 8484999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 270
Target Start/End: Complemental strand, 12281574 - 12281517
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||| |||| ||||| |||||| ||||||| |||||||| ||| ||||||||||||||    
T  12281574 gagaaaatcgaatctgagacctcgaggaggggcacactctcaggtcccaagccaatac 12281517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 28787480 - 28787529
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacact 250  Q
    ||||||||||  | |||||||||| || ||||||||||||||||||||||    
T  28787480 aaattggcactggggagaatcaaacctgagaccttgaggaggagcacact 28787529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 31087242 - 31087310
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||| |||| |||| |||| || || |||||| ||||||| | | ||||||||||||||||||||||    
T  31087242 aaattgacaccggagataatcgaacctgagacctcgaggagggggatactcccagatcccaagccaata 31087310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 15298 - 15376
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| | ||||||||| | ||||||||| || || |||||| |||||||||||||||||||| ||||||||||||||    
T  15298 agcccacctaaattggcatccgagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaatac 15376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 269
Target Start/End: Original strand, 81547 - 81616
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata 269  Q
    |||||||||| ||| ||||||| ||||| |||||||||||||||||||||| |||||| |||| ||||||    
T  81547 caaattggcatcagggagaatcgaatctgagaccttgaggaggagcacacttccagattccaaaccaata 81616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 94955 - 95024
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||||| |||  || || ||||||||||||||||||||||||||| | ||||||||||||    
T  94955 aaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaatac 95024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 270
Target Start/End: Original strand, 19953 - 20015
Alignment:
Q  208 caccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||||| || || |||||||||||||||||| |||||||| | ||||||||||||    
T  19953 caccagagagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaatac 20015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 15752 - 15830
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||||||||   ||||||||||  | |||||||||||||||||| ||||| | |||||||||||||||    
T  15752 agcccacccaaattggcaccgcggagaatcaaacttgagaccttgaggaggagcatactccaaaatcccaagccaatac 15830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 35372 - 35442
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||| |||||| |||| ||  |||||||||||||||||||| ||||| |||| ||||||||||||    
T  35372 caaattggcatcagagataatcgaacttaagaccttgaggaggagcatactcctagattccaagccaatac 35442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 213 - 292
Target Start/End: Complemental strand, 10299 - 10219
Alignment:
Q  213 gagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    ||||||||||||  |||||| | ||||||  || ||||||||||||||||||||||| |||||||| |||||| |||||||    
T  10299 gagagaatcaaacttaagacttcgaggagaggcgcactcccagatcccaagccaatatcatcaggccaacccaagtgggtt 10219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 2694 - 2746
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||||||||||||||||||| || || |||||||||||||||||| |||||    
T  2694 caaattggcaccagagagaatcgaacctgagaccttgaggaggagcagactcc 2746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 5277 - 5218
Alignment:
Q  209 accagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaat 268  Q
    ||||||||||||| || |||| || || ||||||||||||||||||  ||||||||||||    
T  5277 accagagagaatcgaacctaaaactttaaggaggagcacactcccaagtcccaagccaat 5218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 112374 - 112282
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac-atcaggcaaacccatgtgggtt 292  Q
    ||||||||||| ||||||||| || || ||||||  | ||||| ||||||||||||| |||||||||||| | ||||| |||||| |||||||    
T  112374 aaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 215 - 270
Target Start/End: Original strand, 2468 - 2523
Alignment:
Q  215 gagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| || || ||||||||||||||||||||||||||||||| || |||||||    
T  2468 gagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaatac 2523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 270
Target Start/End: Original strand, 835 - 893
Alignment:
Q  212 agagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||| || || |||| | ||||||||||||| |||||||||||||||||||||    
T  835 agagagaatcgaacctgagacttcgaggaggagcacattcccagatcccaagccaatac 893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 200 - 270
Target Start/End: Original strand, 25330 - 25400
Alignment:
Q  200 caaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||| ||||||||| |||| || || |||||||||| |||||||||||||||  || |||||||||||    
T  25330 caaattgacaccagagataatcgaacctgagaccttgagaaggagcacactcccaagtctcaagccaatac 25400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 270
Target Start/End: Original strand, 41608 - 41686
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||||||| || ||||||||||  || || |||||| ||||||||||| |||| |||||| |||||||||||    
T  41608 agcccacccaaattgacatcagagagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaatac 41686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 195 - 252
Target Start/End: Original strand, 24818 - 24875
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||||||||||| |||| || |||| ||||| |||||||||||||||||| |||||    
T  24818 ccatccaaattggctccagggacaatcgaatctgagaccttgaggaggagcaaactcc 24875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 42504 - 42573
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||| |||||||| || || ||||  |||||||||||| |||||||||| ||||| ||||||    
T  42504 aaattggcaccaaagagaatcgaacctgagactctgaggaggagcatactcccagattccaagtcaatac 42573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 230 - 270
Target Start/End: Original strand, 157000 - 157040
Alignment:
Q  230 gaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||| ||||||||||||||||||||||| |||||||||||    
T  157000 gacctcgaggaggagcacactcccagatctcaagccaatac 157040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 267
Target Start/End: Original strand, 5186 - 5260
Alignment:
Q  192 agcccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaa 267  Q
    |||||| | ||||||||||||||| ||||| || || |||||||  ||||||||| ||||| ||||||||||||||    
T  5186 agcccaccgaaattggcaccagagggaatcgaacctgagaccttt-ggaggagcaaactccaagatcccaagccaa 5260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 7704 - 7779
Alignment:
Q  195 ccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    ||||||||||||||||| || |||||| ||  | ||||||| ||||||||||||||  ||| || |||||||||||    
T  7704 ccatccaaattggcaccggatagaatcgaacttgagaccttaaggaggagcacactttcaggtctcaagccaatac 7779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 252
Target Start/End: Original strand, 14949 - 15000
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcc 252  Q
    |||||| |||| ||||||||||||| | |||||| |||||||||||||||||    
T  14949 aaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcc 15000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 270
Target Start/End: Complemental strand, 4434 - 4363
Alignment:
Q  199 ccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||| ||| |||| ||||| || |||| ||||| || ||||||||||||||| |||||||||| ||||    
T  4434 ccaaattgacactagagggaatcgaacctaaaaccttaagaaggagcacactcccaaatcccaagcctatac 4363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 292
Target Start/End: Original strand, 14949 - 15047
Alignment:
Q  194 cccatccaaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaata-catcaggcaaacccatgtgggtt 292  Q
    |||| ||||||| || || ||||||||| || || |||| ||||||||||||| |||||||| ||| ||||||||| |||||| | |||||| |||||||    
T  14949 cccacccaaattagccccggagagaatcgaacctgagac-ttgaggaggagcatactcccagttcctaagccaatagcatcagactaacccaagtgggtt 15047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Original strand, 8626 - 8695
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||||  ||| |||| || || ||||||  ||||||| |||||||||| |||||||||||||||    
T  8626 aaattggcaccgaagataatcgaacctcagacctcaaggaggaccacactcccaaatcccaagccaatac 8695  T

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Target: scaffold0009 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 270
Target Start/End: Original strand, 19867 - 19900
Alignment:
Q  237 aggaggagcacactcccagatcccaagccaatac 270  Q
    |||||||||| |||||||||||||||||||||||    
T  19867 aggaggagcagactcccagatcccaagccaatac 19900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 201 - 270
Target Start/End: Complemental strand, 49398 - 49329
Alignment:
Q  201 aaattggcaccagagagaatcaaatctaagaccttgaggaggagcacactcccagatcccaagccaatac 270  Q
    |||||| |||| ||||||||| || || | |||| || ||||||||||||| || |||||||||||||||    
T  49398 aaattgacaccggagagaatcgaacctgatacctcgaagaggagcacactctcaaatcccaagccaatac 49329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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