View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0851-INSERTION-7 (Length: 430)
Name: NF0851-INSERTION-7
Description: NF0851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0851-INSERTION-7 |
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Alignment Details
Target: chr1 (Bit Score: 349; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 7 - 418
Target Start/End: Original strand, 32184983 - 32185398
Alignment:
| Q |
7 |
agtgcaaactaaagtactattttatatcttatatatttctgaagcagtggtaggacataatcacaattgaatgttttgaatatttctcttcacaaacgat |
106 |
Q |
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|||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32184983 |
agtgcaaactaaagtactattt-atatcttatatatttccgaagcagtggtaggacataatcacaattgaatgttttgaatatttctcttcacaaacgat |
32185081 |
T |
|
| Q |
107 |
aatagttctgtaatataagtgcactttgaaatgta-gtgctacattatctcatactccagcacattgaaataacgttatatactactaaattatctacat |
205 |
Q |
| |
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|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32185082 |
aatagttctgtaatataagtgcactttgaaatataagtgctacattatctcatactccagcacattgaaataacgttatatactactaaattatctacat |
32185181 |
T |
|
| Q |
206 |
tcaattgatattggaaaattgatgacggaatatgtactattctaa-tttgtacccactaatactgaagaatatcaacaaatgctatagttaatttacttg |
304 |
Q |
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|||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32185182 |
tcaattgatattggaaaattgaggacggaatatgtactattctaattttgtacccactaatactgaagaatatcaacaaatgctatagttaatttacttg |
32185281 |
T |
|
| Q |
305 |
tctcttctatatgatgttacacccataacaagcagtgaaattctctcatttaa-ttttttggattac-ttaaattttggagattca-tcgagcactaaat |
401 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||||||| ||||||||||||| |
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| T |
32185282 |
tctcttctatatgatgttacacccataacaagcagtgaaattctctcaattaatttttttggattactttaaattttggagattcattcgagcactaaat |
32185381 |
T |
|
| Q |
402 |
tttagttttaattgaga |
418 |
Q |
| |
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|||||||||| |||||| |
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|
| T |
32185382 |
tttagttttatttgaga |
32185398 |
T |
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