View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0851-INSERTION-9 (Length: 402)
Name: NF0851-INSERTION-9
Description: NF0851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0851-INSERTION-9 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 8 - 402
Target Start/End: Complemental strand, 11055529 - 11055137
Alignment:
| Q |
8 |
actctaatatcaaacatacatcatatattttttaaaa-caatttggtgtttccattaacttgtgatcgggtaagacatgacatgttaactcaatatgtgg |
106 |
Q |
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| T |
11055529 |
actctgatatcaaacatacatcgtatattttttaaaaacaatttggtgtttctattaacttgtgatgggatatgacatgacatgttaacttaatatgtgg |
11055430 |
T |
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| Q |
107 |
cattttatatcaatgacacatcagcacacaaaacattttgtacgaaattaatgattttatttgaaatgatcattttgaaaaaagaaaatagaatttacca |
206 |
Q |
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| T |
11055429 |
cattttatatccatgacacatcagcacacaaaacattttgtacgaaattaatgatt--atttggaatgatcattttaaaaaaa--aaatagaatttacca |
11055334 |
T |
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| Q |
207 |
actttcattctcactctattagagacatactctattattctatagagaaaggttaaagacattttctttttaacattcattctcttactaaatgaaa-ta |
305 |
Q |
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|||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||| || |
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| T |
11055333 |
actttcattctctctctattatagacacactctattattctatagagaaaggttaaagacattttatttttaacattcattctcttattaaacgaaaata |
11055234 |
T |
|
| Q |
306 |
ctactctcttgtgaattagaaaaaacacttgaaaatatgtgttgattttaagtgtaagtggttacagt-gattataattgacttcaatctttaatata |
402 |
Q |
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|||||||||| ||||||||||||| || ||||||||||||| ||| || |||||||||||| ||| |||||||||||| || ||||||||||||| |
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| T |
11055233 |
ctactctcttatgaattagaaaaatgg-ttaaaaatatgtgttggtttcaaatgtaagtggttaaagttgattataattgagttaaatctttaatata |
11055137 |
T |
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