View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0852_high_24 (Length: 295)
Name: NF0852_high_24
Description: NF0852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0852_high_24 |
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Alignment Details
Target: chr7 (Bit Score: 149; Significance: 1e-78; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 29 - 209
Target Start/End: Original strand, 33775187 - 33775370
Alignment:
| Q |
29 |
aggaagttgccaccactcgtgccaaatacttcatttggagatatatagacctcaaaagatcgaaaaagaataataa--attaaatgatggtaaaactcgt |
126 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
33775187 |
aggaagttgccaccactcgtgccaaatacttcatttggagatatatagacctcaaaagatcgaaaaagaataataaatattaaatgatggtaaaactcgt |
33775286 |
T |
|
| Q |
127 |
ttggcaa-taaatttcctattcactttttgggtttcatctatttttcaatgaagtctagaactaaatatatttgaattccctag |
209 |
Q |
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||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
33775287 |
ttggcaattaaatttcctattcactttttgtgttttatctatttttcaatgaagtctagaactaaatatatccgaattccctag |
33775370 |
T |
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