View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0852_high_29 (Length: 251)
Name: NF0852_high_29
Description: NF0852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0852_high_29 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 232; Significance: 1e-128; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 16 - 251
Target Start/End: Complemental strand, 8517251 - 8517016
Alignment:
| Q |
16 |
ataagtaaagaagaagtcaccacgcgaagcttcctctcgtgctatacttgtcaattttttcctcaagttctctttgttgtttgggacattgttttcacgg |
115 |
Q |
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| T |
8517251 |
ataagtaaagaagaagtcaccacgcgaagcttcctctcgtgctatagttgtcaattttttcctcaagttctctttgttgtttgggacattgttttcacgg |
8517152 |
T |
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| Q |
116 |
cttccggaaaagaaagaaataatttttgtgttcgtttcatggttaaaaattaagtttgggaattttagttaacaatgtacgttaaaggaaagagattatg |
215 |
Q |
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| T |
8517151 |
cttccggaaaagaaagaaataatttttgtgttcgtttcatggttaaaaattaagtttgggaattttagttaacaatgtacgttaaaggaaagagattatg |
8517052 |
T |
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| Q |
216 |
aagtcactttgatggtgtctctatgacaccgatata |
251 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
8517051 |
aagtcactttgatggtgtctctatgacaccgatata |
8517016 |
T |
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