View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0852_high_4 (Length: 633)

Name: NF0852_high_4
Description: NF0852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0852_high_4
NF0852_high_4
[»] chr2 (50 HSPs)
chr2 (30-462)||(23738106-23738544)
chr2 (500-602)||(23738004-23738106)
chr2 (154-228)||(36547362-36547443)
chr2 (351-459)||(9789074-9789184)
chr2 (145-196)||(13295445-13295496)
chr2 (142-188)||(44089494-44089540)
chr2 (148-188)||(10041610-10041650)
chr2 (142-192)||(15119803-15119853)
chr2 (145-191)||(37182881-37182927)
chr2 (148-186)||(41824330-41824368)
chr2 (109-192)||(1961373-1961454)
chr2 (376-470)||(27747776-27747872)
chr2 (148-188)||(17844019-17844059)
chr2 (142-190)||(38708729-38708777)
chr2 (145-192)||(2060234-2060281)
chr2 (145-192)||(9431226-9431273)
chr2 (145-192)||(24457129-24457176)
chr2 (144-195)||(27328309-27328359)
chr2 (145-192)||(29819799-29819846)
chr2 (143-194)||(38618422-38618473)
chr2 (148-187)||(44587675-44587714)
chr2 (142-196)||(800753-800807)
chr2 (148-186)||(27964316-27964354)
chr2 (146-196)||(31102009-31102059)
chr2 (148-186)||(45472442-45472480)
chr2 (147-192)||(8740583-8740628)
chr2 (148-185)||(29712519-29712556)
chr2 (148-185)||(30905195-30905232)
chr2 (352-397)||(32620997-32621042)
chr2 (148-185)||(37396275-37396312)
chr2 (142-199)||(40204500-40204557)
chr2 (148-188)||(2544419-2544459)
chr2 (148-188)||(9071273-9071313)
chr2 (148-188)||(10099620-10099660)
chr2 (148-188)||(12440698-12440738)
chr2 (148-188)||(12488491-12488531)
chr2 (148-188)||(12518765-12518805)
chr2 (148-180)||(17378131-17378163)
chr2 (148-188)||(20195357-20195397)
chr2 (144-192)||(21183391-21183439)
chr2 (144-192)||(31024199-31024247)
chr2 (145-181)||(32070536-32070572)
chr2 (148-180)||(34466174-34466206)
chr2 (148-188)||(34911166-34911206)
chr2 (148-184)||(35498193-35498229)
chr2 (148-188)||(40340537-40340577)
chr2 (148-180)||(43514788-43514820)
chr2 (148-188)||(43514824-43514864)
chr2 (148-188)||(44402116-44402156)
chr2 (148-188)||(44949410-44949450)
[»] chr7 (52 HSPs)
chr7 (142-228)||(32549847-32549940)
chr7 (142-192)||(7104747-7104797)
chr7 (142-193)||(18819994-18820045)
chr7 (148-189)||(3106013-3106054)
chr7 (142-195)||(48439957-48440010)
chr7 (341-395)||(8068174-8068228)
chr7 (148-186)||(8169129-8169167)
chr7 (109-184)||(10095714-10095787)
chr7 (149-186)||(30457764-30457801)
chr7 (145-185)||(12274838-12274878)
chr7 (145-185)||(24934580-24934620)
chr7 (148-188)||(27163197-27163237)
chr7 (148-188)||(37066214-37066254)
chr7 (148-188)||(48392934-48392974)
chr7 (145-192)||(4406108-4406155)
chr7 (145-192)||(6455613-6455660)
chr7 (149-196)||(18534928-18534975)
chr7 (145-188)||(22332365-22332408)
chr7 (145-192)||(26385654-26385701)
chr7 (145-192)||(34275220-34275267)
chr7 (154-189)||(47708468-47708503)
chr7 (153-195)||(18091296-18091338)
chr7 (148-186)||(21099276-21099314)
chr7 (142-188)||(28752105-28752151)
chr7 (155-189)||(47535037-47535071)
chr7 (148-189)||(3967772-3967813)
chr7 (147-196)||(5689336-5689385)
chr7 (142-187)||(8379163-8379208)
chr7 (147-192)||(10415003-10415048)
chr7 (109-192)||(25245207-25245288)
chr7 (148-185)||(27942396-27942433)
chr7 (148-185)||(33471561-33471598)
chr7 (145-186)||(34840731-34840772)
chr7 (148-185)||(39970228-39970265)
chr7 (155-188)||(43813193-43813226)
chr7 (148-185)||(46221110-46221147)
chr7 (144-192)||(2943240-2943288)
chr7 (148-188)||(3498362-3498402)
chr7 (145-185)||(5691547-5691587)
chr7 (142-186)||(8169166-8169210)
chr7 (150-186)||(9487092-9487128)
chr7 (148-188)||(17970961-17971001)
chr7 (148-188)||(17983276-17983316)
chr7 (148-188)||(19531985-19532025)
chr7 (145-177)||(19688128-19688160)
chr7 (144-192)||(31115673-31115721)
chr7 (148-188)||(31549825-31549865)
chr7 (148-188)||(39970189-39970229)
chr7 (148-188)||(40002753-40002793)
chr7 (155-195)||(40211191-40211231)
chr7 (148-188)||(46477201-46477241)
chr7 (148-188)||(46578297-46578337)
[»] chr4 (69 HSPs)
chr4 (351-473)||(19084087-19084211)
chr4 (142-244)||(48806282-48806392)
chr4 (341-433)||(4087262-4087356)
chr4 (155-195)||(18488559-18488599)
chr4 (147-254)||(19595992-19596107)
chr4 (148-188)||(20542871-20542911)
chr4 (145-184)||(16667135-16667174)
chr4 (145-196)||(51232331-51232382)
chr4 (145-254)||(20215596-20215705)
chr4 (142-196)||(24798187-24798241)
chr4 (30-103)||(8928327-8928400)
chr4 (155-192)||(10308304-10308341)
chr4 (109-192)||(33036928-33037009)
chr4 (155-187)||(14351302-14351334)
chr4 (398-470)||(17380755-17380827)
chr4 (155-187)||(25700526-25700558)
chr4 (148-188)||(25856078-25856118)
chr4 (148-184)||(29006907-29006943)
chr4 (148-188)||(30279208-30279248)
chr4 (148-188)||(32112382-32112422)
chr4 (148-188)||(35967449-35967489)
chr4 (148-188)||(42013178-42013218)
chr4 (148-188)||(51126137-51126177)
chr4 (145-192)||(4044362-4044409)
chr4 (145-196)||(16468233-16468284)
chr4 (145-176)||(16578589-16578620)
chr4 (145-192)||(21884048-21884095)
chr4 (155-186)||(37255721-37255752)
chr4 (145-192)||(56328479-56328526)
chr4 (154-188)||(3435188-3435222)
chr4 (146-196)||(3511769-3511819)
chr4 (109-192)||(4406236-4406317)
chr4 (148-186)||(15659967-15660005)
chr4 (142-196)||(19878312-19878366)
chr4 (155-189)||(31089953-31089987)
chr4 (146-192)||(36072634-36072680)
chr4 (142-196)||(40814729-40814783)
chr4 (142-192)||(52914062-52914112)
chr4 (155-196)||(10572760-10572801)
chr4 (30-107)||(16714651-16714727)
chr4 (155-196)||(18626746-18626787)
chr4 (155-184)||(19934677-19934706)
chr4 (148-185)||(24275288-24275325)
chr4 (148-185)||(24529644-24529681)
chr4 (148-181)||(30162643-30162676)
chr4 (147-192)||(33694033-33694078)
chr4 (148-189)||(34166144-34166185)
chr4 (148-185)||(51126176-51126213)
chr4 (148-181)||(51975199-51975232)
chr4 (155-184)||(54164852-54164881)
chr4 (164-196)||(4708584-4708616)
chr4 (154-186)||(5535783-5535815)
chr4 (148-184)||(12596748-12596784)
chr4 (148-188)||(15641255-15641295)
chr4 (148-188)||(17028301-17028341)
chr4 (148-188)||(21003972-21004012)
chr4 (148-184)||(23599851-23599887)
chr4 (142-190)||(25022544-25022592)
chr4 (148-188)||(31860719-31860759)
chr4 (148-188)||(36469939-36469979)
chr4 (148-188)||(38949750-38949790)
chr4 (144-196)||(39235165-39235217)
chr4 (162-190)||(40051038-40051066)
chr4 (144-196)||(40952376-40952428)
chr4 (148-180)||(48860562-48860594)
chr4 (148-188)||(53403023-53403063)
chr4 (155-195)||(54106514-54106554)
chr4 (148-188)||(54787014-54787054)
chr4 (148-188)||(55501234-55501274)
[»] chr1 (77 HSPs)
chr1 (341-470)||(1298441-1298572)
chr1 (142-228)||(25547492-25547585)
chr1 (143-196)||(41161525-41161578)
chr1 (142-196)||(48083530-48083584)
chr1 (145-198)||(52183606-52183659)
chr1 (145-196)||(23575347-23575398)
chr1 (145-188)||(29070685-29070728)
chr1 (142-192)||(3549843-3549893)
chr1 (142-196)||(50503243-50503297)
chr1 (142-187)||(18551330-18551375)
chr1 (148-185)||(29070649-29070686)
chr1 (147-192)||(34953927-34953972)
chr1 (154-242)||(51022723-51022817)
chr1 (108-192)||(6283599-6283681)
chr1 (148-188)||(13219449-13219489)
chr1 (144-196)||(14885347-14885399)
chr1 (144-196)||(14885505-14885557)
chr1 (148-184)||(19175620-19175656)
chr1 (148-188)||(27549077-27549117)
chr1 (148-188)||(31909781-31909821)
chr1 (148-188)||(38847334-38847374)
chr1 (148-188)||(42761301-42761341)
chr1 (144-184)||(50308700-50308740)
chr1 (144-196)||(50550179-50550231)
chr1 (145-196)||(8338735-8338786)
chr1 (155-186)||(10256820-10256851)
chr1 (142-185)||(17310444-17310487)
chr1 (368-456)||(34104702-34104792)
chr1 (145-192)||(36040175-36040222)
chr1 (142-185)||(48636744-48636787)
chr1 (155-186)||(52112915-52112946)
chr1 (32-106)||(1298684-1298758)
chr1 (142-188)||(11324501-11324547)
chr1 (142-188)||(11482522-11482568)
chr1 (156-186)||(42660425-42660455)
chr1 (148-186)||(42915716-42915754)
chr1 (154-188)||(45239059-45239093)
chr1 (148-186)||(47446701-47446739)
chr1 (109-181)||(52923318-52923388)
chr1 (142-183)||(5431413-5431454)
chr1 (148-189)||(5753215-5753256)
chr1 (148-181)||(7230134-7230167)
chr1 (147-192)||(14891769-14891814)
chr1 (147-192)||(15351746-15351791)
chr1 (264-329)||(16258723-16258788)
chr1 (376-474)||(21448895-21448994)
chr1 (341-386)||(25426215-25426260)
chr1 (147-196)||(31699047-31699096)
chr1 (144-185)||(35544561-35544602)
chr1 (155-188)||(38824359-38824392)
chr1 (147-192)||(41007708-41007753)
chr1 (148-185)||(49586318-49586355)
chr1 (142-178)||(183908-183944)
chr1 (144-196)||(2492504-2492556)
chr1 (148-180)||(6169886-6169918)
chr1 (142-186)||(6340640-6340684)
chr1 (148-196)||(8243419-8243467)
chr1 (155-187)||(8984227-8984259)
chr1 (209-253)||(13043347-13043391)
chr1 (148-188)||(13145800-13145840)
chr1 (155-195)||(14958720-14958760)
chr1 (148-188)||(15311504-15311544)
chr1 (155-187)||(15351784-15351816)
chr1 (148-188)||(19771177-19771217)
chr1 (155-195)||(20621269-20621309)
chr1 (148-188)||(25378325-25378365)
chr1 (148-188)||(26059187-26059227)
chr1 (144-192)||(33765851-33765899)
chr1 (148-188)||(34184502-34184542)
chr1 (148-180)||(34332980-34333012)
chr1 (148-188)||(35049964-35050004)
chr1 (148-188)||(38149432-38149472)
chr1 (148-188)||(39015595-39015635)
chr1 (148-180)||(40237611-40237643)
chr1 (144-188)||(41007745-41007789)
chr1 (148-188)||(41563029-41563069)
chr1 (154-182)||(52826206-52826234)
[»] chr8 (37 HSPs)
chr8 (142-254)||(4613586-4613705)
chr8 (144-188)||(13964447-13964491)
chr8 (148-186)||(24418913-24418951)
chr8 (154-196)||(3225840-3225882)
chr8 (144-185)||(41753786-41753827)
chr8 (148-185)||(43295959-43295996)
chr8 (148-188)||(42795127-42795167)
chr8 (145-192)||(31505102-31505149)
chr8 (142-188)||(2627242-2627288)
chr8 (148-186)||(17800698-17800736)
chr8 (142-192)||(18959267-18959317)
chr8 (142-192)||(27502927-27502977)
chr8 (148-190)||(33934111-33934153)
chr8 (148-185)||(1875720-1875757)
chr8 (155-196)||(2116145-2116186)
chr8 (155-196)||(2382625-2382666)
chr8 (148-185)||(8568852-8568889)
chr8 (148-189)||(8739665-8739706)
chr8 (155-196)||(10117009-10117050)
chr8 (109-192)||(10934667-10934748)
chr8 (147-192)||(24053628-24053673)
chr8 (154-195)||(24820336-24820376)
chr8 (148-181)||(40802235-40802268)
chr8 (148-193)||(41789373-41789418)
chr8 (149-185)||(899279-899315)
chr8 (148-188)||(2552866-2552906)
chr8 (148-180)||(3105859-3105891)
chr8 (148-188)||(7011860-7011900)
chr8 (144-192)||(7484681-7484729)
chr8 (148-188)||(19293048-19293088)
chr8 (148-188)||(35447852-35447892)
chr8 (148-180)||(36308024-36308056)
chr8 (148-188)||(36308546-36308586)
chr8 (148-188)||(39655449-39655489)
chr8 (148-188)||(42149158-42149198)
chr8 (148-188)||(42666185-42666225)
chr8 (148-188)||(45441134-45441174)
[»] chr6 (27 HSPs)
chr6 (376-454)||(23600549-23600629)
chr6 (142-241)||(6032973-6033080)
chr6 (367-528)||(14273404-14273567)
chr6 (341-422)||(24968893-24968976)
chr6 (148-188)||(7358928-7358968)
chr6 (148-188)||(7418943-7418983)
chr6 (145-192)||(6560686-6560733)
chr6 (145-192)||(8145978-8146025)
chr6 (145-192)||(31398255-31398302)
chr6 (352-459)||(8323113-8323222)
chr6 (148-182)||(13276518-13276552)
chr6 (142-192)||(26527254-26527304)
chr6 (155-188)||(14173458-14173491)
chr6 (155-188)||(14177994-14178027)
chr6 (155-192)||(15517154-15517191)
chr6 (148-181)||(31759399-31759432)
chr6 (109-192)||(34379799-34379880)
chr6 (145-181)||(667803-667839)
chr6 (148-188)||(1858345-1858385)
chr6 (158-186)||(8449616-8449644)
chr6 (158-186)||(8458420-8458448)
chr6 (30-106)||(11642287-11642363)
chr6 (148-188)||(16120997-16121037)
chr6 (142-178)||(29072146-29072182)
chr6 (142-178)||(29104719-29104755)
chr6 (148-188)||(33169250-33169290)
chr6 (144-188)||(34170106-34170150)
[»] chr5 (60 HSPs)
chr5 (109-196)||(33075125-33075210)
chr5 (142-196)||(3100431-3100485)
chr5 (142-192)||(17967341-17967391)
chr5 (148-188)||(884946-884986)
chr5 (148-188)||(39785129-39785169)
chr5 (147-196)||(7738472-7738521)
chr5 (145-182)||(36138387-36138424)
chr5 (113-188)||(42247551-42247624)
chr5 (144-196)||(694266-694318)
chr5 (155-195)||(10495250-10495290)
chr5 (148-180)||(13356213-13356245)
chr5 (148-188)||(15965988-15966028)
chr5 (148-188)||(18942054-18942094)
chr5 (148-188)||(22584300-22584340)
chr5 (148-184)||(23420980-23421016)
chr5 (148-188)||(24089074-24089114)
chr5 (155-186)||(1098667-1098698)
chr5 (145-192)||(1100086-1100133)
chr5 (145-196)||(14153429-14153480)
chr5 (148-195)||(17096504-17096551)
chr5 (145-192)||(36897771-36897818)
chr5 (148-186)||(7313900-7313938)
chr5 (148-186)||(13654541-13654579)
chr5 (142-188)||(15966669-15966715)
chr5 (158-196)||(28518782-28518820)
chr5 (151-185)||(33728911-33728945)
chr5 (148-185)||(1023721-1023758)
chr5 (148-185)||(2673879-2673916)
chr5 (147-192)||(5259416-5259461)
chr5 (148-185)||(6279442-6279479)
chr5 (376-470)||(12822119-12822215)
chr5 (147-192)||(18033386-18033431)
chr5 (352-397)||(18044514-18044559)
chr5 (148-185)||(24089113-24089150)
chr5 (148-185)||(34820657-34820694)
chr5 (148-185)||(36346866-36346903)
chr5 (155-187)||(919685-919717)
chr5 (148-188)||(4162871-4162911)
chr5 (147-191)||(5504408-5504452)
chr5 (152-188)||(7336891-7336927)
chr5 (148-188)||(11784354-11784394)
chr5 (148-188)||(12922440-12922480)
chr5 (148-188)||(14064842-14064882)
chr5 (148-180)||(15385850-15385882)
chr5 (148-180)||(15385886-15385918)
chr5 (275-331)||(15492257-15492313)
chr5 (148-188)||(18003925-18003965)
chr5 (148-188)||(21152656-21152696)
chr5 (148-188)||(21159791-21159831)
chr5 (148-188)||(21163598-21163638)
chr5 (155-187)||(25408612-25408644)
chr5 (148-184)||(25776976-25777012)
chr5 (148-188)||(30489164-30489204)
chr5 (155-187)||(30893845-30893877)
chr5 (148-184)||(32198892-32198928)
chr5 (148-188)||(35067951-35067991)
chr5 (148-180)||(36329156-36329188)
chr5 (148-180)||(37554379-37554411)
chr5 (148-180)||(37685002-37685034)
chr5 (148-188)||(43340447-43340487)
[»] chr3 (51 HSPs)
chr3 (341-474)||(7487601-7487730)
chr3 (144-196)||(37897742-37897794)
chr3 (145-192)||(12047274-12047321)
chr3 (142-193)||(52866443-52866494)
chr3 (148-186)||(1086541-1086579)
chr3 (142-184)||(40639781-40639823)
chr3 (108-196)||(52215940-52216026)
chr3 (154-187)||(39009873-39009906)
chr3 (148-189)||(39682641-39682682)
chr3 (155-196)||(45736726-45736767)
chr3 (144-196)||(12109893-12109945)
chr3 (147-183)||(18409293-18409329)
chr3 (148-188)||(39289593-39289633)
chr3 (155-186)||(2128431-2128462)
chr3 (145-192)||(8439287-8439334)
chr3 (145-192)||(25881200-25881247)
chr3 (155-186)||(39836935-39836966)
chr3 (148-179)||(50603590-50603621)
chr3 (148-186)||(4190698-4190736)
chr3 (142-192)||(12744965-12745015)
chr3 (146-192)||(19810954-19811000)
chr3 (155-189)||(26367542-26367576)
chr3 (148-182)||(45502749-45502783)
chr3 (148-182)||(45502785-45502819)
chr3 (142-192)||(48191741-48191791)
chr3 (145-182)||(16867406-16867443)
chr3 (148-185)||(17005031-17005068)
chr3 (148-185)||(22528884-22528921)
chr3 (155-188)||(29241548-29241581)
chr3 (148-185)||(36458662-36458699)
chr3 (144-185)||(40639866-40639907)
chr3 (148-181)||(50603557-50603590)
chr3 (148-185)||(53739475-53739512)
chr3 (109-192)||(54595785-54595866)
chr3 (148-188)||(1927533-1927573)
chr3 (147-187)||(7981176-7981216)
chr3 (148-180)||(10344399-10344431)
chr3 (148-188)||(13927427-13927467)
chr3 (148-188)||(16127780-16127820)
chr3 (148-188)||(21659206-21659246)
chr3 (148-180)||(26043326-26043358)
chr3 (155-187)||(27707247-27707279)
chr3 (144-196)||(29222831-29222883)
chr3 (148-188)||(35455631-35455671)
chr3 (148-188)||(37331631-37331671)
chr3 (148-180)||(39530427-39530459)
chr3 (148-188)||(44435242-44435282)
chr3 (148-188)||(46739375-46739415)
chr3 (148-188)||(53717965-53718005)
chr3 (148-188)||(53739511-53739551)
chr3 (142-194)||(54783403-54783455)
[»] scaffold0635 (1 HSPs)
scaffold0635 (148-188)||(5420-5460)
[»] scaffold0149 (1 HSPs)
scaffold0149 (110-193)||(24669-24750)
[»] scaffold0121 (1 HSPs)
scaffold0121 (148-188)||(17466-17506)
[»] scaffold0111 (2 HSPs)
scaffold0111 (148-188)||(38075-38115)
scaffold0111 (148-189)||(38384-38425)
[»] scaffold0020 (1 HSPs)
scaffold0020 (145-196)||(139356-139407)
[»] scaffold0013 (1 HSPs)
scaffold0013 (142-181)||(58326-58365)
[»] scaffold1266 (1 HSPs)
scaffold1266 (155-185)||(201-231)
[»] scaffold0227 (1 HSPs)
scaffold0227 (344-459)||(1545-1662)
[»] scaffold0009 (1 HSPs)
scaffold0009 (142-196)||(216333-216387)
[»] scaffold1122 (1 HSPs)
scaffold1122 (376-470)||(1847-1943)
[»] scaffold0756 (1 HSPs)
scaffold0756 (148-185)||(3589-3626)
[»] scaffold0542 (1 HSPs)
scaffold0542 (148-185)||(3446-3483)
[»] scaffold0172 (2 HSPs)
scaffold0172 (148-185)||(11655-11692)
scaffold0172 (148-188)||(11616-11656)
[»] scaffold0321 (1 HSPs)
scaffold0321 (148-188)||(1701-1741)
[»] scaffold0113 (1 HSPs)
scaffold0113 (144-196)||(40481-40533)
[»] scaffold0036 (1 HSPs)
scaffold0036 (144-196)||(89626-89678)
[»] scaffold0018 (1 HSPs)
scaffold0018 (155-191)||(153975-154011)


Alignment Details
Target: chr2 (Bit Score: 274; Significance: 1e-153; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 30 - 462
Target Start/End: Complemental strand, 23738544 - 23738106
Alignment:
Q  30 cttacgttattttcagtttatttttcagtcgttgtggttatattttgacccaaattagaggatttctagaacaattgcgtacaccatccggtcactatta 129  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||    
T  23738544 cttacgttattttcagtttatttttcagtcgttgtagttatattttgacccaaattagaggatttctagaacaattgcataaaccatccagtcactatta 23738445  T
Q  130 taagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaag-----atcatcatttattaaa-gaatctaaaatgtcaa 223  Q
    |||||       ||||||||||| ||| ||||||||||||||||||| ||||||||||||||     | |||||||||||||| ||||||||||||||||    
T  23738444 taagcaaaaaatttaacattttaggtttattcaataaatgatgtatgcggtctatattaaagactatagcatcatttattaaatgaatctaaaatgtcaa 23738345  T
Q  224 tttttactt-taatagtgaccagagagtgtatggtttatccgatattttttaatgttttcatcttgaatcatgtactttttgttttcttgaaaccaaaca 322  Q
    ||||||||| |||||||||||||||||||||||||||||  |||||||| |||||||||||||| |||||||||| ||||||||||| ||||||||||||    
T  23738344 tttttacttataatagtgaccagagagtgtatggtttatgagatattttgtaatgttttcatctggaatcatgtagtttttgttttcctgaaaccaaaca 23738245  T
Q  323 attcttagaagnnnnnnnatgtaattcagcaaagcaaagcaccacatgaagaattgggaagacaatggatgaagacaagaggcatatgaagatattacaa 422  Q
    ||||||| |         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23738244 attctta-agtgttttttatgtaattcagcaaagcaaagcaccacatgaagaattgggaagacaatggatgaagacaagaggcatatgaagatattacaa 23738146  T
Q  423 agtggagaaattttattccaagtccagagacaagtttcga 462  Q
    |||||||||||| |||||| |||||  |||||||||||||    
T  23738145 agtggagaaattctattccgagtcccaagacaagtttcga 23738106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 500 - 602
Target Start/End: Complemental strand, 23738106 - 23738004
Alignment:
Q  500 aacacgttgggaaaaggtgttatgcacccgggcgtcttgttttgagcaccatgcgcgaggcgcatgcctccacgtgtggcatgtgtgcgcacttgatagg 599  Q
    ||||||||| ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  23738106 aacacgttgagaaaaggtgttatgcactcgggcgtcttattttgagcaccatgcgcgaggcgcatgcctccacgtgtggcatgcgtgcgcacttgaaagg 23738007  T
Q  600 aaa 602  Q
    |||    
T  23738006 aaa 23738004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 154 - 228
Target Start/End: Complemental strand, 36547443 - 36547362
Alignment:
Q  154 gttcattcaataaatgatgtatgtggtctatattaaagat------catcatttattaaa-gaatctaaaatgtcaattttt 228  Q
    ||||||||||||||||||||||||| ||||||||||||||      |||||||||||||| |||| ||||||||||||||||    
T  36547443 gttcattcaataaatgatgtatgtgatctatattaaagatcacatacatcatttattaaatgaatttaaaatgtcaattttt 36547362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 459
Target Start/End: Original strand, 9789074 - 9789184
Alignment:
Q  351 gcaaagcaaagcaccacatgaagaattgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttattccaagtcca 448  Q
    ||||| ||||| ||| ||||||||||||| ||||||||| ||| |||  |||||||  | |||||| |||||||  |||||||||| ||||||||||||     
T  9789074 gcaaaacaaagtacctcatgaagaattggaaagacaatgaatgtagattcaagaggtctctgaagacattacaagttggagaaattctattccaagtccc 9789173  T
Q  449 gagacaagttt 459  Q
     ||||||||||    
T  9789174 aagacaagttt 9789184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 13295496 - 13295445
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    ||||||||||||||||||||||||||| |||||||| ||||||| |||||||    
T  13295496 acattttaagttcattcaataaatgatatatgtggtatatattatagatcat 13295445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 44089540 - 44089494
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  44089540 ttaacattttaaattcattcaatacatgatgtatgtggtctatatta 44089494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 10041650 - 10041610
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  10041650 ttttaagttcattcaattaatgatgtatgtggtctatatta 10041610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 15119803 - 15119853
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||||  |||||||| |||||||||||||||||||||| ||||||    
T  15119803 ttaacattttagattcattcattaaatgatgtatgtggtctataataaaga 15119853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 191
Target Start/End: Complemental strand, 37182927 - 37182881
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaag 191  Q
    ||||||||| |||||||| |||||||||||||||||||||| |||||    
T  37182927 acattttaaattcattcattaaatgatgtatgtggtctataataaag 37182881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 41824368 - 41824330
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  41824368 ttttaggttcattcaataaatgatgtatgtggtctatat 41824330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 1961454 - 1961373
Alignment:
Q  109 tacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||||| ||||||||||||||||       | |||||||||  |||||||| |||||||||||||||||||||| ||||||    
T  1961454 tacaccatcgggtcactattataagcaaaaa--tcaacattttagattcattcattaaatgatgtatgtggtctataataaaga 1961373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 376 - 470
Target Start/End: Original strand, 27747776 - 27747872
Alignment:
Q  376 ttgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttattccaagtccagagacaagtttcgagaaagaaa 470  Q
    |||||||||||||| |||  ||  |||||||| | |||||| |||| |||||||||| ||| |||||||||||   ||||||||||| |||||||||    
T  27747776 ttgggaagacaatgaatgttgattcaagaggcctttgaagacattataaagtggagacattctattccaagtctctagacaagtttcaagaaagaaa 27747872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 17844059 - 17844019
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  17844059 ttttaagttcattcaattaatgatgtatgtggtccatatta 17844019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 38708777 - 38708729
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaa 190  Q
    |||||||||||||||||||||||||||||  ||| || |||||||||||    
T  38708777 ttaacattttaagttcattcaataaatgacatatatgatctatattaaa 38708729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 2060234 - 2060281
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  2060234 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 2060281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 9431226 - 9431273
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  9431226 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 9431273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 24457129 - 24457176
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  24457129 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 24457176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 27328359 - 27328309
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    |||||||||| ||||||||||| || ||||||||||||||||||| ||||||    
T  27328359 aacattttaaattcattcaatacat-atgtatgtggtctatattatagatca 27328309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 29819799 - 29819846
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||||||||| | | |||||||||||||||||||| ||||||    
T  29819799 acattttaagttcatttatttaatgatgtatgtggtctataataaaga 29819846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 194
Target Start/End: Original strand, 38618422 - 38618473
Alignment:
Q  143 taacattttaagttcattcaataaatgatgtatgtggtctatattaaagatc 194  Q
    ||||||||||  |||||||  |||||||||||||||||||||| ||||||||    
T  38618422 taacattttagattcattcgttaaatgatgtatgtggtctataataaagatc 38618473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 44587675 - 44587714
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatt 187  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  44587675 ttttaggttcattgaataaatgatgtatgtggtctatatt 44587714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 800807 - 800753
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||||| |||||||| |||||||||||| |||| |||| |||| |||||    
T  800807 ttaacattttaaattcattcattaaatgatgtatatggtttataataaaaatcat 800753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 27964316 - 27964354
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||| ||||||||||||||| |||||||||||||||||    
T  27964316 ttttaggttcattcaataaattatgtatgtggtctatat 27964354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 31102059 - 31102009
Alignment:
Q  146 cattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||  |||||||| ||||||||||||||||| |||| ||||||||||    
T  31102059 cattttagattcattcattaaatgatgtatgtggtttataataaagatcat 31102009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 45472442 - 45472480
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  45472442 ttttaaattcattcaataaatgatgtatgtagtctatat 45472480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 8740628 - 8740583
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||| ||||||||| | |||||||||||||||||||| ||||||    
T  8740628 attttaggttcattcatttaatgatgtatgtggtctataataaaga 8740583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 29712519 - 29712556
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  29712519 ttttaagttcattcaattaatgatgtatgtggtttata 29712556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 30905232 - 30905195
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  30905232 ttttaagttcattcaattaatgatgtatgtggtttata 30905195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 32621042 - 32620997
Alignment:
Q  352 caaagcaaagcaccacatgaagaattgggaagacaatggatgaaga 397  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||    
T  32621042 caaagcaaaatacctcatgaagaattgggaagacaatgaatgaaga 32620997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 37396312 - 37396275
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  37396312 ttttaggttcattcaatcaatgatgtatgtggtctata 37396275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 199
Target Start/End: Complemental strand, 40204557 - 40204500
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcatcat 199  Q
    |||||||||||  ||| | || ||||||||||||||| |||||| |||||||||||||    
T  40204557 ttaacattttagattcctacattaaatgatgtatgtgatctataataaagatcatcat 40204500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 2544459 - 2544419
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| |||||||||||| ||||||||||||    
T  2544459 ttttaggttcattcattaaatgatgtatttggtctatatta 2544419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 9071313 - 9071273
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| ||| ||||||||||| |||||||    
T  9071313 ttttaagttcattcaattaataatgtatgtggtttatatta 9071273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 10099660 - 10099620
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||| ||||||||||||||||    
T  10099660 ttttaggttcattcaattaatgatatatgtggtctatatta 10099620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 12440738 - 12440698
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| | ||||||| |||||||||||||    
T  12440738 ttttaagttcattcaattagtgatgtacgtggtctatatta 12440698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 12488531 - 12488491
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||| ||||| |||||||| ||||||||||||    
T  12488531 ttttaagttcattgaataactgatgtatttggtctatatta 12488491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 12518805 - 12518765
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||| ||||| |||||||| ||||||||||||    
T  12518805 ttttaagttcattgaataactgatgtatttggtctatatta 12518765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 17378163 - 17378131
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  17378163 ttttaagttcattcaattaatgatgtatgtggt 17378131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 20195397 - 20195357
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  20195397 ttttaggttcattcaattaatgatgtatgtggtccatatta 20195357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 21183439 - 21183391
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||  |||||||| |||||||||||||||||||| | ||||||    
T  21183439 aacattttagattcattcattaaatgatgtatgtggtctacaataaaga 21183391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 31024199 - 31024247
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||  |||||||| |||||||||||||||||| ||| ||||||    
T  31024199 aacattttagattcattcattaaatgatgtatgtggtcgataataaaga 31024247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 32070572 - 32070536
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtc 181  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  32070572 acattttaggttcattcaattaatgatgtatgtggtc 32070536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 34466206 - 34466174
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  34466206 ttttaagttcattcaattaatgatgtatgtggt 34466174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 34911206 - 34911166
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  34911206 ttttaggttcattcaattaatgatgtatgtggtcgatatta 34911166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 35498229 - 35498193
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctat 184  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  35498229 ttttaggttcattcaataaatgatgtatttggtctat 35498193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 40340577 - 40340537
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  40340577 ttttaggttcattcaattaatgatgtatgtggtccatatta 40340537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 43514788 - 43514820
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  43514788 ttttaagttcattcaattaatgatgtatgtggt 43514820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 43514864 - 43514824
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||| ||||||||||||    
T  43514864 ttttaggttcattcaattaatgatgtatatggtctatatta 43514824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 44402116 - 44402156
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  44402116 ttttaggttcattcatttaatgatgtatgtggtctatatta 44402156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 44949450 - 44949410
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| | |||||||||||||||| ||||||    
T  44949450 ttttaagttcattcatttaatgatgtatgtggtccatatta 44949410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 32549847 - 32549940
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagat------catcatttatt-aaagaatctaaaatgtcaattttt 228  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||      ||||||||||| || ||||||||||| |||||||||    
T  32549847 ttaacattttatgttcatttaataaatgatgtatgtggtctatattaaagatcacatacatcatttattgaatgaatctaaaatatcaattttt 32549940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 7104797 - 7104747
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  7104797 ttaatattttaagttcatttaataaatgatgtatgtggtctatattaaaga 7104747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 142 - 193
Target Start/End: Complemental strand, 18820045 - 18819994
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagat 193  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  18820045 ttaacattttagattcattcaataaatgatgtatgttgtctatattaaagat 18819994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 3106054 - 3106013
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaa 189  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  3106054 ttttaggttcattcaataaatgatgtatgtggtctatattaa 3106013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 195
Target Start/End: Original strand, 48439957 - 48440010
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    ||||||||||| |||||||||||||||  ||||| |||||||||||||||||||    
T  48439957 ttaacattttatgttcattcaataaattgtgtatttggtctatattaaagatca 48440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 395
Target Start/End: Original strand, 8068174 - 8068228
Alignment:
Q  341 atgtaattcagcaaagcaaagcaccacatgaagaattgggaagacaatggatgaa 395  Q
    |||||||||  ||||||||||||||| |||||||||||| ||||||||| |||||    
T  8068174 atgtaattcgacaaagcaaagcaccatatgaagaattggaaagacaatgaatgaa 8068228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 8169129 - 8169167
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  8169129 ttttaggttcattcaataaatgatgtatgtggtctatat 8169167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 10095714 - 10095787
Alignment:
Q  109 tacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctat 184  Q
    |||||| |||||||||||||||||||       |||||||||||  |||||||| |||||||||||||||||||||    
T  10095714 tacaccctccggtcactattataagcaaaaa--ttaacattttagattcattcattaaatgatgtatgtggtctat 10095787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 149 - 186
Target Start/End: Original strand, 30457764 - 30457801
Alignment:
Q  149 tttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    |||||||||||||||||||||||||||||| |||||||    
T  30457764 tttaagttcattcaataaatgatgtatgtgatctatat 30457801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 12274838 - 12274878
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctata 185  Q
    |||||||| |||||||||||||||||||||||||| |||||    
T  12274838 acattttatgttcattcaataaatgatgtatgtggcctata 12274878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 24934580 - 24934620
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctata 185  Q
    |||||||| ||||||||||||||||||||||||||| ||||    
T  24934580 acattttaggttcattcaataaatgatgtatgtggtttata 24934620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 27163197 - 27163237
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  27163197 ttttaggttcattgaataaatgatgtatgtggtctatatta 27163237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 37066214 - 37066254
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  37066214 ttttaggttcattcaattaatgatgtatgtggtctatatta 37066254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 48392974 - 48392934
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  48392974 ttttaagttcattcaattaatgatgtatgtggtatatatta 48392934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 4406108 - 4406155
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  4406108 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 4406155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 6455660 - 6455613
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  6455660 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 6455613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 18534975 - 18534928
Alignment:
Q  149 tttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  18534975 tttatgttcattcatttaatgatgtatgtggtctataataaagatcat 18534928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 22332408 - 22332365
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||||||||||||| ||| ||||||||||||| |||||||||    
T  22332408 acattttaagttcattgaattaatgatgtatgtgatctatatta 22332365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 26385654 - 26385701
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||||  |||||||||||||| |||||||||||||||| ||||||    
T  26385654 acattttagattcattcaataaattatgtatgtggtctataataaaga 26385701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 34275220 - 34275267
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  34275220 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 34275267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 189
Target Start/End: Complemental strand, 47708503 - 47708468
Alignment:
Q  154 gttcattcaataaatgatgtatgtggtctatattaa 189  Q
    ||||||| ||||||||||||||||||||||||||||    
T  47708503 gttcatttaataaatgatgtatgtggtctatattaa 47708468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 153 - 195
Target Start/End: Complemental strand, 18091338 - 18091296
Alignment:
Q  153 agttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||    
T  18091338 agttcattcaataaatgatttatgtggtatatattacagatca 18091296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 21099276 - 21099314
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||| ||||||||||||||||||||| |||||||||||    
T  21099276 ttttaggttcattcaataaatgatgtaagtggtctatat 21099314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 28752105 - 28752151
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| |||||| |||||||| |||||||||||| ||||||||||||    
T  28752105 ttaactttttaatttcattcattaaatgatgtatttggtctatatta 28752151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 47535071 - 47535037
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaa 189  Q
    ||||||||||||||||||||||||||| |||||||    
T  47535071 ttcattcaataaatgatgtatgtggtccatattaa 47535037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 3967813 - 3967772
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaa 189  Q
    ||||| ||||||| |||||||||||||||||| |||||||||    
T  3967813 ttttaggttcattgaataaatgatgtatgtggactatattaa 3967772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 5689385 - 5689336
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||| ||||||||| | ||||||||||||||| |||| ||||||||||    
T  5689385 attttaggttcattcatttaatgatgtatgtggtttataataaagatcat 5689336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 187
Target Start/End: Original strand, 8379163 - 8379208
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatatt 187  Q
    ||||| ||||| ||||||||||| |||||||||||||||| |||||    
T  8379163 ttaactttttaggttcattcaattaatgatgtatgtggtccatatt 8379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 10415048 - 10415003
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||| ||||||||| | |||||||||||||||||||| ||||||    
T  10415048 attttatgttcattcatttaatgatgtatgtggtctataataaaga 10415003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 25245288 - 25245207
Alignment:
Q  109 tacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||| |||||||||||||||||||       | |||||||||  |||||||| |||||||||||||||||||| | ||||||    
T  25245288 tacaccctccggtcactattataagcaaaaa--tcaacattttagattcattcattaaatgatgtatgtggtctacaataaaga 25245207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 27942433 - 27942396
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  27942433 ttttaagttcattcaattaatgatgtatgtggtttata 27942396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 33471598 - 33471561
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  33471598 ttttaggttcattcaattaatgatgtatgtggtctata 33471561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 186
Target Start/End: Complemental strand, 34840772 - 34840731
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    |||||||| ||||||||||||||| || ||||||||||||||    
T  34840772 acattttaggttcattcaataaataatctatgtggtctatat 34840731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 39970265 - 39970228
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  39970265 ttttaaattcattcaatcaatgatgtatgtggtctata 39970228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 43813226 - 43813193
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||||||||||||| ||||||    
T  43813226 ttcattcaataaatgatgtatgtggtcaatatta 43813193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 46221110 - 46221147
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  46221110 ttttaagttcattcaattaatgatgtatgtggtttata 46221147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 2943240 - 2943288
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||  |||||||| |||||||||||||||||||| | ||||||    
T  2943240 aacattttagattcattcattaaatgatgtatgtggtctacaataaaga 2943288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 3498402 - 3498362
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  3498402 ttttaggttcattcaattaatgatgtatgtggtccatatta 3498362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 5691587 - 5691547
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||||||| |||||||||| ||||||||||||||| ||||    
T  5691587 acattttaaattcattcaattaatgatgtatgtggtttata 5691547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 8169210 - 8169166
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||| |||||  ||||||||||||||||||||||| ||||||||    
T  8169210 ttaactttttagattcattcaataaatgatgtatgtagtctatat 8169166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 9487128 - 9487092
Alignment:
Q  150 ttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||||| |||||||||||||||||| ||||||||||    
T  9487128 ttaagtttattcaataaatgatgtatatggtctatat 9487092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 17970961 - 17971001
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||| ||| ||||||| |||||||||||||||||||    
T  17970961 ttttaagtttatttaataaataatgtatgtggtctatatta 17971001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 17983276 - 17983316
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||| ||| ||||||| |||||||||||||||||||    
T  17983276 ttttaagtttatttaataaataatgtatgtggtctatatta 17983316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 19531985 - 19532025
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  19531985 ttttaggttcattcaattaatgatgtatgtggtccatatta 19532025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 19688128 - 19688160
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgt 177  Q
    |||||||| ||||||||||||||||||||||||    
T  19688128 acattttaggttcattcaataaatgatgtatgt 19688160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 31115721 - 31115673
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||  |||||||| ||||| |||||||||||||||| ||||||    
T  31115721 aacattttagcttcattcattaaattatgtatgtggtctataataaaga 31115673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 31549825 - 31549865
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| ||||||||||||||| |||||||    
T  31549825 ttttaggttcattcaatcaatgatgtatgtggtttatatta 31549865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 39970189 - 39970229
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| ||||||||||||||| |||||||    
T  39970189 ttttaggttcattcaatcaatgatgtatgtggtttatatta 39970229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 40002793 - 40002753
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  40002793 ttttaggttcattcatttaatgatgtatgtggtctatatta 40002753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 40211191 - 40211231
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    |||||||||| ||||||||||||||| ||||||| ||||||    
T  40211191 ttcattcaatcaatgatgtatgtggtttatattatagatca 40211231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 46477241 - 46477201
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  46477241 ttttaggttcattcaattaatgatgtatgtggtccatatta 46477201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 46578297 - 46578337
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||| |||||||||| ||||||||||||||| |||||||    
T  46578297 ttttaaattcattcaattaatgatgtatgtggtttatatta 46578337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 6e-17; HSPs: 69)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 351 - 473
Target Start/End: Original strand, 19084087 - 19084211
Alignment:
Q  351 gcaaagcaaagcaccacatgaagaattgggaagacaatggatgaagac--aagaggcatatgaagatattacaaagtggagaaattttattccaagtcca 448  Q
    ||||| ||||||||  | ||||||||||||||||||||| |||||||   ||| ||| |||||||| |||||||||||||||| |  |||||||||| |     
T  19084087 gcaaaacaaagcacatcgtgaagaattgggaagacaatgaatgaagattaaagcggcctatgaagacattacaaagtggagaactactattccaagtgcc 19084186  T
Q  449 gagacaagtttcgagaaagaaagca 473  Q
     ||||||||||| || |||||||||    
T  19084187 aagacaagtttcaaggaagaaagca 19084211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 244
Target Start/End: Original strand, 48806282 - 48806392
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatc------atcatttatt-aaagaatctaaaatgtcaatttttactt-t 233  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||| |      || ||||||| || |||||||| |||||||||||||||| |    
T  48806282 ttaacattttaagtttattcaataaatgatgtatgcggtctatattaaagaccacatatattatttattgaatgaatctaagatgtcaatttttacttat 48806381  T
Q  234 aatagtgacca 244  Q
    ||| |||||||    
T  48806382 aatggtgacca 48806392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 341 - 433
Target Start/End: Original strand, 4087262 - 4087356
Alignment:
Q  341 atgtaattcagcaaagcaaagcaccacatgaagaattgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaat 433  Q
    ||||||||| ||||||||||||||| ||| ||||||| |||||||| ||||||||||  ||||| || | | |||| |||||||||| |||||||    
T  4087262 atgtaattcggcaaagcaaagcacctcataaagaattaggaagacactggatgaagattcaagaagcttctaaagacattacaaagtagagaaat 4087356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 18488559 - 18488599
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  18488559 ttcattcaataaatgatgtatgtgatctatattaaagatca 18488599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 254
Target Start/End: Complemental strand, 19596107 - 19595992
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaagat------catcatttattaaa-gaatctaaaatgtcaatttttactt-taatag 238  Q
    ||||||| ||||||||||||||||| ||| || ||||||||||| ||      |||||||||||||| ||| ||||||| ||||||||||||| ||||||    
T  19596107 attttaaattcattcaataaatgatatatatgatctatattaaaaatcaaatacatcatttattaaatgaacctaaaatatcaatttttacttataatag 19596008  T
Q  239 tgaccagagagtgtat 254  Q
    | | || |||||||||    
T  19596007 taatcaaagagtgtat 19595992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 20542911 - 20542871
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  20542911 ttttaagttcattcaattaatgatgtatgtggtctatatta 20542871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 16667174 - 16667135
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctat 184  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  16667174 acattttacgttcattcaataaatgatgtatgtggtctat 16667135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 51232382 - 51232331
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||||||||| | | |||||||||||||||||||| ||||||||||    
T  51232382 acattttaagttcatttatttaatgatgtatgtggtctataataaagatcat 51232331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 254
Target Start/End: Original strand, 20215596 - 20215705
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaagat-catcatttatt-aaagaatctaaaatgtcaatttttactt-taatagtga 241  Q
    |||||||| |||||||||||||||||||||||||||||   ||  |||| ||||||||||| || ||||||||||| |||| |||| |||  ||||||||    
T  20215596 acattttaggttcattcaataaatgatgtatgtggtct---ttctagatacatcatttattgaatgaatctaaaatatcaacttttgcttaaaatagtga 20215692  T
Q  242 ccagagagtgtat 254  Q
    | |||| ||||||    
T  20215693 ctagagggtgtat 20215705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 24798241 - 24798187
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||| ||||||| |||||||| ||||||||||| |||||||||| ||||||||||    
T  24798241 ttaatattttaaattcattcattaaatgatgtacgtggtctataataaagatcat 24798187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 30 - 103
Target Start/End: Original strand, 8928327 - 8928400
Alignment:
Q  30 cttacgttattttcagtttatttttcagtcgttgtggttatattttgacccaaattagaggatttctagaacaa 103  Q
    ||||||||||||| ||  |||||||||||| || | |||||  |||||||||||||||||||||| || |||||    
T  8928327 cttacgttatttttagcatatttttcagtcattttagttatcatttgacccaaattagaggatttttaaaacaa 8928400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 10308341 - 10308304
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  10308341 ttcattcaataaatgatgtatgtggtctataataaaga 10308304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 33037009 - 33036928
Alignment:
Q  109 tacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||| |||||||||||||||||||       ||||||||||   |||||||||||||  |||||||||||||||||||||||    
T  33037009 tacaccctccggtcactattataagcaaaat--ttaacattttctattcattcaataaagaatgtatgtggtctatattaaaga 33036928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 14351302 - 14351334
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatt 187  Q
    |||||||||||||||||||||||||||||||||    
T  14351302 ttcattcaataaatgatgtatgtggtctatatt 14351334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 398 - 470
Target Start/End: Complemental strand, 17380827 - 17380755
Alignment:
Q  398 caagaggcatatgaagatattacaaagtggagaaattttattccaagtccagagacaagtttcgagaaagaaa 470  Q
    |||||||| | |||||| ||||||||| ||||||||| |||| |||||||  |||||||||||  ||||||||    
T  17380827 caagaggcctttgaagacattacaaagaggagaaattctatttcaagtcccaagacaagtttcatgaaagaaa 17380755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 25700558 - 25700526
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatt 187  Q
    |||||||||||||||||||||||||||||||||    
T  25700558 ttcattcaataaatgatgtatgtggtctatatt 25700526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 25856118 - 25856078
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  25856118 ttttaggttcattcaattaatgatgtatgtggtctatatta 25856078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 29006943 - 29006907
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctat 184  Q
    |||||| ||||||||||||||||||||||||||||||    
T  29006943 ttttaaattcattcaataaatgatgtatgtggtctat 29006907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 30279248 - 30279208
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  30279248 ttttaggttcattcaattaatgatgtatgtggtctatatta 30279208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 32112422 - 32112382
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  32112422 ttttaagttcattcaattaatgatgtatgtggtccatatta 32112382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 35967489 - 35967449
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  35967489 ttttaagttcattcattaaatgatgtatgtggtccatatta 35967449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 42013178 - 42013218
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  42013178 ttttaaattcattcaattaatgatgtatgtggtctatatta 42013218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 51126137 - 51126177
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  51126137 ttttaggttcattcaattaatgatgtatgtggtctatatta 51126177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 4044409 - 4044362
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  4044409 acattttatgttcattcatttaatgatgtatgtggtctataataaaga 4044362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 16468233 - 16468284
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| ||||||| | | |||||||||||||||||||| ||||||||||    
T  16468233 acattttaggttcatttatttaatgatgtatgtggtctataataaagatcat 16468284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 16578620 - 16578589
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatg 176  Q
    ||||||||||||||||||||||||||||||||    
T  16578620 acattttaagttcattcaataaatgatgtatg 16578589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 21884048 - 21884095
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  21884048 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 21884095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 186
Target Start/End: Original strand, 37255721 - 37255752
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||||||||||||||||||||||||||||||    
T  37255721 ttcattcaataaatgatgtatgtggtctatat 37255752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 56328479 - 56328526
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  56328479 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 56328526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 154 - 188
Target Start/End: Original strand, 3435188 - 3435222
Alignment:
Q  154 gttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| |||||||||||||||||||    
T  3435188 gttcattcaataaataatgtatgtggtctatatta 3435222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 3511819 - 3511769
Alignment:
Q  146 cattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| || ||||| ||||||||| |||||||||||| ||||||||||    
T  3511819 cattttaaatttattcattaaatgatgaatgtggtctataataaagatcat 3511769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 4406236 - 4406317
Alignment:
Q  109 tacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||||||||||||||||||        | |||||||||  || ||||| |||||||||||||||||||||| ||||||    
T  4406236 tacaccatccggtcactattataag--taaaaatcaacattttagatttattcattaaatgatgtatgtggtctataataaaga 4406317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 15659967 - 15660005
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  15659967 ttttaggttcattcaataaatgatgtatgtagtctatat 15660005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 19878312 - 19878366
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||||  |||||||| |||| ||||||||||| ||||| ||||||||||    
T  19878312 ttaacattttagattcattcattaaacgatgtatgtggactataataaagatcat 19878366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 31089987 - 31089953
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaa 189  Q
    |||||| ||||||||||||||||||||||||||||    
T  31089987 ttcattgaataaatgatgtatgtggtctatattaa 31089953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 36072680 - 36072634
Alignment:
Q  146 cattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| |||||||| |||||||||||||| ||||||| ||||||    
T  36072680 cattttaaattcattcattaaatgatgtatgtagtctataataaaga 36072634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 40814783 - 40814729
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||||  |||||||| |||||||| |||||||| |||| ||||||||||    
T  40814783 ttaacattttagattcattcattaaatgatatatgtggtttataataaagatcat 40814729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 52914112 - 52914062
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||| ||||||  |||||||| |||||||||||||||||||||| ||||||    
T  52914112 ttaatattttagattcattcattaaatgatgtatgtggtctataataaaga 52914062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 10572760 - 10572801
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| | |||||||||||||||||||| ||||||||||    
T  10572760 ttcattcattgaatgatgtatgtggtctataataaagatcat 10572801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 16714727 - 16714651
Alignment:
Q  30 cttacgttattttcagtttatttttcagtcgttgtggttatattttgacccaaattagaggatttctagaacaattgc 107  Q
    ||||||||||||||||   ||||||||||| || | ||| |  ||||||||||| |||||||||| ||||||||||||    
T  16714727 cttacgttattttcagca-atttttcagtcattttagttttgatttgacccaaactagaggatttttagaacaattgc 16714651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 18626746 - 18626787
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| ||||||||||||||||| |||| ||||||||||    
T  18626746 ttcattcattaaatgatgtatgtggtttataataaagatcat 18626787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 184
Target Start/End: Original strand, 19934677 - 19934706
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctat 184  Q
    ||||||||||||||||||||||||||||||    
T  19934677 ttcattcaataaatgatgtatgtggtctat 19934706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 24275325 - 24275288
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  24275325 ttttaaattcattcaattaatgatgtatgtggtctata 24275288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 24529681 - 24529644
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    |||| |||||||||||| ||||||||||||||||||||    
T  24529681 tttttagttcattcaattaatgatgtatgtggtctata 24529644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 30162643 - 30162676
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtc 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  30162643 ttttaagttcattcaattaatgatgtatgtggtc 30162676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Complemental strand, 33694078 - 33694033
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||| ||||||||| ||||| |||||||||||||||| ||||||    
T  33694078 attttaggttcattcattaaattatgtatgtggtctataataaaga 33694033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 34166144 - 34166185
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaa 189  Q
    ||||| ||||||||||| |||||||||||||||| |||||||    
T  34166144 ttttaggttcattcaattaatgatgtatgtggtccatattaa 34166185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 51126213 - 51126176
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  51126213 ttttaggttcattcaattaatgatgtatgtggtctata 51126176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 51975232 - 51975199
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtc 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  51975232 ttttaagttcattcaattaatgatgtatgtggtc 51975199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 184
Target Start/End: Original strand, 54164852 - 54164881
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctat 184  Q
    ||||||||||||||||||||||||||||||    
T  54164852 ttcattcaataaatgatgtatgtggtctat 54164881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 164 - 196
Target Start/End: Original strand, 4708584 - 4708616
Alignment:
Q  164 taaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||||||||||||||| ||||||||||    
T  4708584 taaatgatgtatgtggtctataataaagatcat 4708616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 154 - 186
Target Start/End: Complemental strand, 5535815 - 5535783
Alignment:
Q  154 gttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||||||||||| |||||||||||||||||||    
T  5535815 gttcattcaataactgatgtatgtggtctatat 5535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 12596784 - 12596748
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctat 184  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  12596784 ttttaggttcattcaataaatgatatatgtggtctat 12596748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 15641255 - 15641295
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| | |||||||||| ||||||||||||    
T  15641255 ttttaagttcattcatttaatgatgtatatggtctatatta 15641295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 17028341 - 17028301
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  17028341 ttttaggttcattcaattaatgatgtatgtggtccatatta 17028301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 21003972 - 21004012
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| |||||||||| ||||||| ||||    
T  21003972 ttttaagttcattcaattaatgatgtatatggtctacatta 21004012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 23599887 - 23599851
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctat 184  Q
    |||||| |||||||||| |||||||||||||||||||    
T  23599887 ttttaaattcattcaattaatgatgtatgtggtctat 23599851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 25022544 - 25022592
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaa 190  Q
    |||||||||||  |||||||| ||||||||||||||| |||||| ||||    
T  25022544 ttaacattttacattcattcattaaatgatgtatgtgatctataataaa 25022592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 31860759 - 31860719
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| | ||||| |||||||||||||||||    
T  31860759 ttttaagttcattcatttaatgacgtatgtggtctatatta 31860719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 36469979 - 36469939
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  36469979 ttttgagttcattcatttaatgatgtatgtggtctatatta 36469939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 38949790 - 38949750
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||| || |||||||||||||||||||| ||||||||||    
T  38949790 ttttaaatttattcaataaatgatgtatgtagtctatatta 38949750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 39235165 - 39235217
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||  |||||| | ||||||||||||||||| |||| ||||||||||    
T  39235165 aacattttagattcatttattaaatgatgtatgtggtttataataaagatcat 39235217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 162 - 190
Target Start/End: Original strand, 40051038 - 40051066
Alignment:
Q  162 aataaatgatgtatgtggtctatattaaa 190  Q
    |||||||||||||||||||||||||||||    
T  40051038 aataaatgatgtatgtggtctatattaaa 40051066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 40952376 - 40952428
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||  |||||||| |||||||| ||||||||||||| |||| |||||    
T  40952376 aacattttagattcattcattaaatgatatatgtggtctataataaaaatcat 40952428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 48860562 - 48860594
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    |||||| ||||||||||||||||||||||||||    
T  48860562 ttttaaattcattcaataaatgatgtatgtggt 48860594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 53403023 - 53403063
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| ||||||||||||||| |||||||    
T  53403023 ttttatgttcattcaattaatgatgtatgtggtttatatta 53403063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 54106514 - 54106554
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    ||||||||||||||||||||||| ||||| | |||||||||    
T  54106514 ttcattcaataaatgatgtatgttgtctacaataaagatca 54106554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 54787014 - 54787054
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| ||||||||||||||| |||||||    
T  54787014 ttttaggttcattcaatcaatgatgtatgtggtttatatta 54787054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 55501234 - 55501274
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| ||||||||||||||| |||||||    
T  55501234 ttttaggttcattcaattaatgatgtatgtggtttatatta 55501274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 341 - 470
Target Start/End: Complemental strand, 1298572 - 1298441
Alignment:
Q  341 atgtaattcagcaaagcaaagcaccacatgaagaattgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttat 438  Q
    ||||||||  ||||||||||||||| |||||||||||||||||||| || | |||||   ||||| | | |||||| ||||||||||||| ||||| |||    
T  1298572 atgtaattaggcaaagcaaagcacctcatgaagaattgggaagacagtgaaagaagattgaagagacctttgaagacattacaaagtggaaaaattctat 1298473  T
Q  439 tccaagtccagagacaagtttcgagaaagaaa 470  Q
     ||||||||  | ||||||||| || ||||||    
T  1298472 accaagtcccaacacaagtttcaaggaagaaa 1298441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 25547585 - 25547492
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga------tcatcatttattaaa-gaatctaaaatgtcaattttt 228  Q
    ||||||||||||||||||||||||||| ||||||||| | |||||||||||       |||||||||||||| |||||||||||||||| ||||    
T  25547585 ttaacattttaagttcattcaataaataatgtatgtgatatatattaaagaccatatacatcatttattaaatgaatctaaaatgtcaaatttt 25547492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 41161578 - 41161525
Alignment:
Q  143 taacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||||||||||||| | |||||||||||||||||||| ||||||||||    
T  41161578 taacattttaagttcattcatttaatgatgtatgtggtctataataaagatcat 41161525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 48083530 - 48083584
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  48083530 ttaatattttaggttcattcattaaatgatgtatgtggtctataataaagatcat 48083584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 52183606 - 52183659
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaagatcatca 198  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||||||||    
T  52183606 acattttaggttcattcatttaatgatgtatgtggtctataataaagatcatca 52183659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 23575347 - 23575398
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  23575347 acattttaggttcattcatttaatgatgtatgtggtctataataaagatcat 23575398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 188
Target Start/End: Complemental strand, 29070728 - 29070685
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||||| |||||||||||||||||||||||||||| ||||||    
T  29070728 acattttaggttcattcaataaatgatgtatgtggtccatatta 29070685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 3549893 - 3549843
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||||| |||||||| ||||| |||||||||||||||| ||||||    
T  3549893 ttaacattttaaattcattcattaaataatgtatgtggtctataataaaga 3549843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 50503297 - 50503243
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||||  |||||| | |||||||||||||||||||||| ||||||||||    
T  50503297 ttaacattttatattcatttattaaatgatgtatgtggtctataataaagatcat 50503243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 142 - 187
Target Start/End: Complemental strand, 18551375 - 18551330
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatatt 187  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||    
T  18551375 ttaacattttagattcattcaacaaatgatgtatgtggtctatatt 18551330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 29070649 - 29070686
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  29070649 ttttatgttcattcaataaatgatgtatgtggtctata 29070686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 34953927 - 34953972
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||| |||||||| |||||||||||||||||||||| ||||||    
T  34953927 attttaaattcattcattaaatgatgtatgtggtctataataaaga 34953972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 51022817 - 51022723
Alignment:
Q  154 gttcattcaataaatgatgtatgtggtctatattaaagat----catcatttatt-aaagaatctaaaatgtcaatttttactt-taatagtgac 242  Q
    |||||||||||||||| ||||||||  |||||||||||||    ||||||||||| || ||||||||||| |||| |||| ||| ||||||||||    
T  51022817 gttcattcaataaatggtgtatgtgacctatattaaagatcacacatcatttattgaatgaatctaaaatatcaacttttgcttataatagtgac 51022723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 6283681 - 6283599
Alignment:
Q  108 gtacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||||||||||||||| |||||||       |  |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  6283681 gtacaccatccggtcactaatataagcaaaaaact--acattttaggttcattcatttaatgatgtatgtggtctataataaaga 6283599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 13219449 - 13219489
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| ||||||||||||||| |||||||    
T  13219449 ttttaagttcattcaatcaatgatgtatgtggtttatatta 13219489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 14885347 - 14885399
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||| || ||||| ||||| |||||||||||||||| ||||||||||    
T  14885347 aacattttaaatttattcattaaattatgtatgtggtctataataaagatcat 14885399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 14885505 - 14885557
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||| || ||||| ||||| |||||||||||||||| ||||||||||    
T  14885505 aacattttaaatttattcattaaattatgtatgtggtctataataaagatcat 14885557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 19175620 - 19175656
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctat 184  Q
    ||||| |||||||||||||||||||||||||||||||    
T  19175620 ttttaggttcattcaataaatgatgtatgtggtctat 19175656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 27549077 - 27549117
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  27549077 ttttaagttcattcaattaatgatgtatgtggtccatatta 27549117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 31909781 - 31909821
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  31909781 ttttaggttcattcaattaatgatgtatgtggtctatatta 31909821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 38847334 - 38847374
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  38847334 ttttaagttcattcatttaatgatgtatgtggtctatatta 38847374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 42761341 - 42761301
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  42761341 ttttaagttcattcatttaatgatgtatgtggtctatatta 42761301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 184
Target Start/End: Complemental strand, 50308740 - 50308700
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctat 184  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  50308740 aacattttaagttcattcattaaatgatgtatttggtctat 50308700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 50550231 - 50550179
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||  |||||||| ||||||||||||||| |||||| ||||||||||    
T  50550231 aacattttagattcattcattaaatgatgtatgtgatctataataaagatcat 50550179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 8338786 - 8338735
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| ||||||| | | |||||||||||||||||||| ||||||||||    
T  8338786 acattttaggttcatttatttaatgatgtatgtggtctataataaagatcat 8338735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 186
Target Start/End: Original strand, 10256820 - 10256851
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||||||||||||||||||||||||||||||    
T  10256820 ttcattcaataaatgatgtatgtggtctatat 10256851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 17310444 - 17310487
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||||||||| |||||||||| |||||||||    
T  17310444 ttaactttttaagttcattcaattaatgatgtatatggtctata 17310487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 456
Target Start/End: Complemental strand, 34104792 - 34104702
Alignment:
Q  368 atgaagaattgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttattccaagtccagagacaag 456  Q
    ||||||| |||||||||||||||| |||||  |||||||| | |||| |||||||||   ||||||||| |||| |||||||  |||||||    
T  34104792 atgaagatttgggaagacaatggacgaagattcaagaggcctctgaaaatattacaagaaggagaaattctattacaagtcctaagacaag 34104702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 36040175 - 36040222
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  36040175 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 36040222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 185
Target Start/End: Original strand, 48636744 - 48636787
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||    
T  48636744 ttaactttttaggttcattcaatcaatgatgtatgtggtctata 48636787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 186
Target Start/End: Original strand, 52112915 - 52112946
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||||||||||||||||||||||||||||||    
T  52112915 ttcattcaataaatgatgtatgtggtctatat 52112946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 32 - 106
Target Start/End: Complemental strand, 1298758 - 1298684
Alignment:
Q  32 tacgttattttcagtttatttttcagtcgttgtggttatattttgacccaaattagaggatttctagaacaattg 106  Q
    ||||||||||||||  |||||||||||  || | |||||  ||||||| ||||||||||| || |||||||||||    
T  1298758 tacgttattttcagcatatttttcagttattttagttatgatttgaccaaaattagaggagttttagaacaattg 1298684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 11324547 - 11324501
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||||||||| |||||||||| |||||||||| |||||| |||||    
T  11324547 ttaacattttaaattcattcaattaatgatgtatatggtctttatta 11324501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 11482568 - 11482522
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||||||||| |||||||||| |||||||||| |||||| |||||    
T  11482568 ttaacattttaaattcattcaattaatgatgtatatggtctttatta 11482522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 156 - 186
Target Start/End: Complemental strand, 42660455 - 42660425
Alignment:
Q  156 tcattcaataaatgatgtatgtggtctatat 186  Q
    |||||||||||||||||||||||||||||||    
T  42660455 tcattcaataaatgatgtatgtggtctatat 42660425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 42915754 - 42915716
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  42915754 ttttaagttcattaaataaatgatatatgtggtctatat 42915716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 154 - 188
Target Start/End: Complemental strand, 45239093 - 45239059
Alignment:
Q  154 gttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||| |||||||||||||||||||||||    
T  45239093 gttcattcaattaatgatgtatgtggtctatatta 45239059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 47446739 - 47446701
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    |||||| ||||||||||||||||||||||| ||||||||    
T  47446739 ttttaaattcattcaataaatgatgtatgtagtctatat 47446701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 181
Target Start/End: Original strand, 52923318 - 52923388
Alignment:
Q  109 tacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtc 181  Q
    |||||| |||||||||||||||||||       || || ||||| ||||||||||||||||||||||||||||    
T  52923318 tacaccctccggtcactattataagcaaaat--ttcactttttaggttcattcaataaatgatgtatgtggtc 52923388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 5431454 - 5431413
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtcta 183  Q
    ||||| |||||  |||||||||||||||||||||||||||||    
T  5431454 ttaactttttagattcattcaataaatgatgtatgtggtcta 5431413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 5753215 - 5753256
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaa 189  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||    
T  5753215 ttttaagtttatttaattaatgatgtatgtggtctatattaa 5753256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 7230167 - 7230134
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtc 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  7230167 ttttaagttcattcaattaatgatgtatgtggtc 7230134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 14891769 - 14891814
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||| |||||||||||| ||||||||| ||||||    
T  14891769 attttaagatcattcattaaatgatgtatatggtctataataaaga 14891814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 15351746 - 15351791
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||| ||||||||||||||||||||||| ||||| | ||||||    
T  15351746 attttaaattcattcaataaatgatgtatgttgtctacaataaaga 15351791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 16258788 - 16258723
Alignment:
Q  264 gatattttttaatgttttcatcttgaatcatgtactttttgttttcttgaaaccaaacaattctta 329  Q
    |||||||| |||||||||||  |||| ||||||| |||| |||||||  ||||||| |||||||||    
T  16258788 gatattttgtaatgttttcacattgagtcatgtaattttagttttctcaaaaccaagcaattctta 16258723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 474
Target Start/End: Original strand, 21448895 - 21448994
Alignment:
Q  376 ttgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttattccaagtccagagacaagtttcgagaaagaaagca 473  Q
    ||||||||||||||||||| ||  ||| |||| ||| |||||||||||||| | ||||||||| ||| | ||||  ||||||||||  || |||||||||    
T  21448895 ttgggaagacaatggatgatgattcaaaaggcttataaagatattacaaagagaagaaatttt-ttcaatgtcccaagacaagtttaaagcaagaaagca 21448993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 25426260 - 25426215
Alignment:
Q  341 atgtaattcagcaaagcaaagcaccacatgaagaattgggaagaca 386  Q
    ||||||||| |||||||||  |||| ||||||||||||||||||||    
T  25426260 atgtaattcggcaaagcaagacacctcatgaagaattgggaagaca 25426215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 31699096 - 31699047
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||||||||| | |||| |||||||| |||||| ||||||||||    
T  31699096 attttaagttcattcatttaatggtgtatgtgctctataataaagatcat 31699047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 35544561 - 35544602
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctata 185  Q
    |||||||||| |||||||  ||||||||||||||||||||||    
T  35544561 aacattttaaattcattcgttaaatgatgtatgtggtctata 35544602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 38824392 - 38824359
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||||||| |||||||||||||||||||||||    
T  38824392 ttcattcaattaatgatgtatgtggtctatatta 38824359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 41007708 - 41007753
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||| || ||||| |||||||||||||||||||||| ||||||    
T  41007708 attttaaatttattcattaaatgatgtatgtggtctataataaaga 41007753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 49586355 - 49586318
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  49586355 ttttaggttcattcaataaatgatgtatatggtctata 49586318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 183908 - 183944
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtg 178  Q
    |||||||||||| |||||| |||||||||||||||||    
T  183908 ttaacattttaaattcatttaataaatgatgtatgtg 183944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 2492504 - 2492556
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||  |||||||| | ||||||||||||||| |||| ||||||||||    
T  2492504 aacattttagattcattcactgaatgatgtatgtggtttataataaagatcat 2492556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 6169918 - 6169886
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  6169918 ttttaagttcattcaattaatgatgtatgtggt 6169886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 186
Target Start/End: Complemental strand, 6340684 - 6340640
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||| ||||| |||||||||||||||||| |||||||| |||||    
T  6340684 ttaactttttaggttcattcaataaatgatatatgtggtttatat 6340640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 8243467 - 8243419
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    ||||||||| ||| |||||||||||||||| |||| ||||| |||||||    
T  8243467 ttttaagtttattgaataaatgatgtatgttgtctgtattatagatcat 8243419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 8984227 - 8984259
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatt 187  Q
    |||||||||||||||||||||||||||| ||||    
T  8984227 ttcattcaataaatgatgtatgtggtctttatt 8984259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 13043391 - 13043347
Alignment:
Q  209 aatctaaaatgtcaatttttactttaatagtgaccagagagtgta 253  Q
    |||||||||| | ||||||| |||||||||||||||||| |||||    
T  13043391 aatctaaaatattaatttttgctttaatagtgaccagagggtgta 13043347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 13145840 - 13145800
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| ||| ||||||||| |||||||||    
T  13145840 ttttaagttcattcaattaataatgtatgtgatctatatta 13145800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 14958720 - 14958760
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    ||||||||||||||||||||||| ||||| | |||||||||    
T  14958720 ttcattcaataaatgatgtatgttgtctacaataaagatca 14958760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 15311504 - 15311544
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| | |||||||||||||||| ||||||    
T  15311504 ttttaagttcattcatttaatgatgtatgtggtccatatta 15311544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 15351816 - 15351784
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatt 187  Q
    |||||||||||||||||||||||||||| ||||    
T  15351816 ttcattcaataaatgatgtatgtggtctttatt 15351784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 19771177 - 19771217
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||| ||||||||||||||| ||||| ||||||||||||    
T  19771177 ttttaaattcattcaataaatgttgtatatggtctatatta 19771217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 20621269 - 20621309
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    ||||||||||||| ||||||||||||||||| ||| |||||    
T  20621269 ttcattcaataaacgatgtatgtggtctataataatgatca 20621309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 25378365 - 25378325
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  25378365 ttttaggttcattcaattaatgatgtatgtggtcaatatta 25378325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 26059227 - 26059187
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| |||||| ||||||||| ||||||    
T  26059227 ttttaagttcattcaattaatgatttatgtggtccatatta 26059187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 33765899 - 33765851
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||  |||||| | |||||||||||||||||||||| ||||||    
T  33765899 aacattttagattcatttattaaatgatgtatgtggtctataataaaga 33765851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 34184542 - 34184502
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||||||| ||||||||| || ||||||    
T  34184542 ttttaagttcattcaataaattatgtatgtgatccatatta 34184502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 34332980 - 34333012
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  34332980 ttttaagttcattcaattaatgatgtatgtggt 34333012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 35049964 - 35050004
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| ||||||||||||| |||||||||    
T  35049964 ttttaggttcattcaattaatgatgtatgtgatctatatta 35050004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 38149472 - 38149432
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| | |||||||||||||||| ||||||    
T  38149472 ttttaagttcattcatttaatgatgtatgtggtccatatta 38149432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 39015595 - 39015635
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  39015595 ttttaggttcattcaattaatgatgtatgtggtcaatatta 39015635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 40237643 - 40237611
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  40237643 ttttaagttcattcaattaatgatgtatgtggt 40237611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 41007789 - 41007745
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||||||  |||||||| ||||||||||||||||||| |||||    
T  41007789 aacattttagattcattcattaaatgatgtatgtggtctttatta 41007745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 41563029 - 41563069
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| |||||||||||||||||||||||| ||| ||||||    
T  41563029 ttttaggttcattcaataaatgatgtatgtagtccatatta 41563069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 154 - 182
Target Start/End: Complemental strand, 52826234 - 52826206
Alignment:
Q  154 gttcattcaataaatgatgtatgtggtct 182  Q
    |||||||||||||||||||||||||||||    
T  52826234 gttcattcaataaatgatgtatgtggtct 52826206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 254
Target Start/End: Original strand, 4613586 - 4613705
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatca-----tcatttattaaa-gaatctaaaatgtcaatttttactt-ta 234  Q
    |||| |||||| ||| ||| |||||||||| ||||| |||||||||||||| ||     ||||||||| || |||| |||||||||||||||||||| ||    
T  4613586 ttaagattttaggtttattaaataaatgatatatgtagtctatattaaagaccacataatcatttattgaatgaatttaaaatgtcaatttttacttata 4613685  T
Q  235 atagtgaccagagagtgtat 254  Q
    |||||||||| |||||||||    
T  4613686 atagtgaccatagagtgtat 4613705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 13964447 - 13964491
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  13964447 aacattttaaattcattcaataaatgatgtatgtggtctatatta 13964491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 24418913 - 24418951
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24418913 ttttaagttcattcaataaatgatgtatgtggtctatat 24418951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 3225882 - 3225840
Alignment:
Q  154 gttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  3225882 gttcattcattaaatgatgtatgtggtctataataaagatcat 3225840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 41753786 - 41753827
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctata 185  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  41753786 aacattttaaattcattcattaaatgatgtatgtggtctata 41753827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 43295996 - 43295959
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    |||||| |||||||||||||||||||||||||||||||    
T  43295996 ttttaaattcattcaataaatgatgtatgtggtctata 43295959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 42795127 - 42795167
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  42795127 ttttaagttcattcaattaatgatgtatgtgatctatatta 42795167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 31505149 - 31505102
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  31505149 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 31505102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 188
Target Start/End: Complemental strand, 2627288 - 2627242
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| |||||||||||||||||||||| ||||| | ||||||||||    
T  2627288 ttaactttttaagttcattcaataaatggtgtatttagtctatatta 2627242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 17800736 - 17800698
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  17800736 ttttaaattcattcaataaatgatgtctgtggtctatat 17800698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 18959267 - 18959317
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||||||| ||||||||||||| ||||||| |||||  ||||||||||    
T  18959267 ttaacattttaggttcattcaataattgatgtacgtggtaaatattaaaga 18959317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 27502927 - 27502977
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||||| |||||||| ||||||||||||||| | |||| ||||||    
T  27502927 ttaacattttaaattcattcattaaatgatgtatgtgatttataataaaga 27502977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 33934111 - 33934153
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaaa 190  Q
    ||||| ||||||||||| |||||||||||||||||||| ||||    
T  33934111 ttttaggttcattcaatcaatgatgtatgtggtctataataaa 33934153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 1875720 - 1875757
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  1875720 ttttaggttcattcaattaatgatgtatgtggtctata 1875757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 2116145 - 2116186
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| | |||||||||||||||||||| ||||||||||    
T  2116145 ttcattcatttaatgatgtatgtggtctataataaagatcat 2116186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 2382625 - 2382666
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| |||||||||||| ||||||||| ||||||||||    
T  2382625 ttcattcattaaatgatgtatttggtctataataaagatcat 2382666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 8568852 - 8568889
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  8568852 ttttaggttcattcaattaatgatgtatgtggtctata 8568889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 8739706 - 8739665
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaa 189  Q
    |||||| |||||  ||||||||||||||||||||||||||||    
T  8739706 ttttaaattcatgaaataaatgatgtatgtggtctatattaa 8739665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 10117009 - 10117050
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| |||||||||||||||||||||| |||| |||||    
T  10117009 ttcattcattaaatgatgtatgtggtctataataaatatcat 10117050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 10934748 - 10934667
Alignment:
Q  109 tacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||| |||||||||||||||||||       | |||||||||  |||||||| |||||||||||||||||||| | ||||||    
T  10934748 tacaccctccggtcactattataagcaaaaa--tcaacattttagattcattcattaaatgatgtatgtggtctacaataaaga 10934667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 24053628 - 24053673
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||| ||||||||| | |||||||||||||||||||| ||||||    
T  24053628 attttaggttcattcatttaatgatgtatgtggtctataataaaga 24053673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 24820336 - 24820376
Alignment:
Q  154 gttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  24820336 gttcattcaataaatgatgtatgtggtttata-taaagatca 24820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 40802235 - 40802268
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtc 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  40802235 ttttaagttcattcaattaatgatgtatgtggtc 40802268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 193
Target Start/End: Original strand, 41789373 - 41789418
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaaagat 193  Q
    ||||||||||||||||||||  || |||||||||||||||| ||||    
T  41789373 ttttaagttcattcaataaacaatatatgtggtctatattatagat 41789418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 899279 - 899315
Alignment:
Q  149 tttaagttcattcaataaatgatgtatgtggtctata 185  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  899279 tttaggttcattcaattaatgatgtatgtggtctata 899315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 2552906 - 2552866
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  2552906 ttttaggttcattcaattaatgatgtatgtggtccatatta 2552866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 3105891 - 3105859
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  3105891 ttttaagttcattcaattaatgatgtatgtggt 3105859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 7011900 - 7011860
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  7011900 ttttaggttcattcatttaatgatgtatgtggtctatatta 7011860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 7484729 - 7484681
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||  |||||||| |||||||||||||||||| ||| ||||||    
T  7484729 aacattttagattcattcattaaatgatgtatgtggtcgataataaaga 7484681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 19293048 - 19293088
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| ||||||||||||||| |||||||    
T  19293048 ttttaggttcattcaatcaatgatgtatgtggtttatatta 19293088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 35447892 - 35447852
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||| ||||||||| |||||||||||||||| ||||||    
T  35447892 ttttaaggtcattcaattaatgatgtatgtggtccatatta 35447852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 36308024 - 36308056
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||| |||||||||||||||||||||||||||    
T  36308024 ttttaggttcattcaataaatgatgtatgtggt 36308056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 36308546 - 36308586
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||| ||||| |||||||||||||||||| ||||||    
T  36308546 ttttaagtttattcattaaatgatgtatgtggtccatatta 36308586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 39655449 - 39655489
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  39655449 ttttaggttcattcaattaatgatgtatgtggtccatatta 39655489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 42149158 - 42149198
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| ||||||||||||| | |||||||    
T  42149158 ttttaagttcattcaattaatgatgtatgtgatttatatta 42149198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 42666225 - 42666185
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  42666225 ttttaggttcattcatttaatgatgtatgtggtctatatta 42666185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 45441134 - 45441174
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  45441134 ttttaggttcattcatttaatgatgtatgtggtctatatta 45441174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 376 - 454
Target Start/End: Original strand, 23600549 - 23600629
Alignment:
Q  376 ttgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttattccaagtccagagaca 454  Q
    |||||||||||||  |||||||  ||| ||||||||||||| ||||||||| ||||||||| ||||||||||||| |||||    
T  23600549 ttgggaagacaattaatgaagattcaaaaggcatatgaagacattacaaagaggagaaattctattccaagtccaaagaca 23600629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 241
Target Start/End: Complemental strand, 6033080 - 6032973
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga------tcatcatttattaaa-gaatctaaaatgtcaatttttactt-t 233  Q
    |||| |||||| |||||| ||||||||||||||||| ||||||||||||||       ||| |||||||||| ||||||||||| ||||||||||||| |    
T  6033080 ttaatattttaggttcatccaataaatgatgtatgtagtctatattaaagaccacatacattatttattaaatgaatctaaaatatcaatttttacttat 6032981  T
Q  234 aatagtga 241  Q
    ||||||||    
T  6032980 aatagtga 6032973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 367 - 528
Target Start/End: Complemental strand, 14273567 - 14273404
Alignment:
Q  367 catgaagaattgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttattccaagtccagagacaagtttcgaga 464  Q
    ||||||||||||  ||||||||| |||||||  |||||||| | ||||||||||||| | |||| ||||| |||| ||||| |  ||||||||||| ||     
T  14273567 catgaagaattgaaaagacaatgaatgaagattcaagaggcctttgaagatattacagattggataaattctatttcaagttccaagacaagtttcaagg 14273468  T
Q  465 aagaaagcacccaataatacaaagaaaaagatagaaacacgttgggaaaaggtgttatgcaccc 528  Q
    ||||||  ||  || || |  ||||||| |  | |||| ||||||||||||||||| |||||||    
T  14273467 aagaaaaaactaaaaaaaatgaagaaaatggcaaaaacgcgttgggaaaaggtgttgtgcaccc 14273404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 422
Target Start/End: Original strand, 24968893 - 24968976
Alignment:
Q  341 atgtaattcagcaaagcaaagcaccacatgaagaattgggaagacaatggatgaaga--caagaggcatatgaagatattacaa 422  Q
    |||||||||||||||||||  |||| |||||||||||||||||||| || ||||| |  |||||||| ||| |||| |||||||    
T  24968893 atgtaattcagcaaagcaagacacctcatgaagaattgggaagacattgtatgaaaaatcaagaggcctatcaagacattacaa 24968976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 7358968 - 7358928
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  7358968 tttttagttcattcaataattgatgtatgtggtctatatta 7358928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 7418983 - 7418943
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||| ||| |||||||||||||||||||||||    
T  7418983 ttttaagttcattaaattaatgatgtatgtggtctatatta 7418943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 6560686 - 6560733
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  6560686 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 6560733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 8145978 - 8146025
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  8145978 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 8146025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 31398255 - 31398302
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  31398255 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 31398302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 352 - 459
Target Start/End: Original strand, 8323113 - 8323222
Alignment:
Q  352 caaagcaaagcaccacatgaagaattgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttattccaagtccag 449  Q
    |||| |||| |||| |||||| |||||| ||  |||||||||||||  | |||||| | | |||| |||| |||||||||||||| |||| |||||||      
T  8323113 caaaccaaatcacctcatgaaaaattggaaaatcaatggatgaagattcgagaggcctctcaagacattagaaagtggagaaattctatttcaagtccca 8323212  T
Q  450 agacaagttt 459  Q
    ||||||||||    
T  8323213 agacaagttt 8323222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 13276518 - 13276552
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtct 182  Q
    ||||| |||||||||||||||||||||||||||||    
T  13276518 ttttaggttcattcaataaatgatgtatgtggtct 13276552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 26527304 - 26527254
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||||  |||||||| ||||||||||||||||| |||| ||||||    
T  26527304 ttaacattttagattcattcattaaatgatgtatgtggtttataataaaga 26527254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 14173491 - 14173458
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||||||||||||| ||||||    
T  14173491 ttcattcaataaatgatgtatgtggtcaatatta 14173458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 14178027 - 14177994
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||||||||||||| ||||||    
T  14178027 ttcattcaataaatgatgtatgtggtcaatatta 14177994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 192
Target Start/End: Complemental strand, 15517191 - 15517154
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  15517191 ttcattcattaaatgatgtatgtggtctataataaaga 15517154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Complemental strand, 31759432 - 31759399
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtc 181  Q
    ||||||||||||||||| ||||||||||||||||    
T  31759432 ttttaagttcattcaattaatgatgtatgtggtc 31759399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 34379880 - 34379799
Alignment:
Q  109 tacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| |||||||||||||||||       | |||||||||  |||||||| |||||||||||||||||| ||| ||||||    
T  34379880 tacaccatacggtcactattataagcaaaaa--tcaacattttagattcattcattaaatgatgtatgtggtcgataataaaga 34379799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 145 - 181
Target Start/End: Complemental strand, 667839 - 667803
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtc 181  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  667839 acattttaggttcattcaattaatgatgtatgtggtc 667803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 1858385 - 1858345
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  1858385 ttttaagtttattcaattaatgatgtatgtggtccatatta 1858345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 186
Target Start/End: Original strand, 8449616 - 8449644
Alignment:
Q  158 attcaataaatgatgtatgtggtctatat 186  Q
    |||||||||||||||||||||||||||||    
T  8449616 attcaataaatgatgtatgtggtctatat 8449644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 158 - 186
Target Start/End: Original strand, 8458420 - 8458448
Alignment:
Q  158 attcaataaatgatgtatgtggtctatat 186  Q
    |||||||||||||||||||||||||||||    
T  8458420 attcaataaatgatgtatgtggtctatat 8458448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 11642287 - 11642363
Alignment:
Q  30 cttacgttattttcagtttatttttcagtcgttgtggttatattttgacccaaattagaggatttctagaacaattg 106  Q
    ||||||||||||||||  ||||||||  || || | |||||  |||||||||||||||| || || |||||||||||    
T  11642287 cttacgttattttcagcatatttttcgatcattttagttatgatttgacccaaattagaagagttttagaacaattg 11642363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 16120997 - 16121037
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||| ||||||||||||||||||||  ||||||||||||    
T  16120997 ttttaaattcattcaataaatgatgtacttggtctatatta 16121037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 29072182 - 29072146
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtg 178  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  29072182 ttaacattttaaattcatacaataaatgatgtatgtg 29072146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 29104755 - 29104719
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtg 178  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  29104755 ttaacattttaaattcatacaataaatgatgtatgtg 29104719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 33169290 - 33169250
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||| ||||||| |||||||||||||||| ||||||    
T  33169290 ttttaagtttattcaattaatgatgtatgtggtccatatta 33169250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 34170106 - 34170150
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||||||  |||||||| ||||||||||||||| |||||||||    
T  34170106 aacattttagattcattcattaaatgatgtatgtgatctatatta 34170150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 109 - 196
Target Start/End: Complemental strand, 33075210 - 33075125
Alignment:
Q  109 tacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    ||||||||| ||||||||||||||||       |||| |||||| ||||||||| |||||||||||||||||||||| ||||||||||    
T  33075210 tacaccatctggtcactattataagcaaaaa--ttaatattttaggttcattcattaaatgatgtatgtggtctatagtaaagatcat 33075125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 196
Target Start/End: Original strand, 3100431 - 3100485
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||||  ||||||||||||||||||||||| ||||||| ||||||||||    
T  3100431 ttaacattttagattcattcaataaatgatgtatgtagtctataataaagatcat 3100485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 17967341 - 17967391
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||||||| ||||||||||||||| |||||||| ||||||||||||||    
T  17967341 ttaacattttacgttcattcaataaataatgtatgttgtctatattaaaga 17967391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 884986 - 884946
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  884986 ttttaagttcattcaataaatgatgtatgtggtccatatta 884946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 39785169 - 39785129
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  39785169 ttttaaattcattcaataaatgatgtatgtggtctatatta 39785129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 147 - 196
Target Start/End: Complemental strand, 7738521 - 7738472
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||| ||||||||| | |||||||||||||||||||| ||||||||||    
T  7738521 attttatgttcattcatttaatgatgtatgtggtctataataaagatcat 7738472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 145 - 182
Target Start/End: Original strand, 36138387 - 36138424
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtct 182  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36138387 acattttaaattcattcaataaatgatgtatgtggtct 36138424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 113 - 188
Target Start/End: Original strand, 42247551 - 42247624
Alignment:
Q  113 ccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||||||||       || || ||||| ||||||||||||||||||||| |||||||||||||    
T  42247551 ccatccggtcactattataagcaaatt--ttgactttttatgttcattcaataaatgatgtacgtggtctatatta 42247624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 694318 - 694266
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    ||||||||| ||| ||| ||||||| |||||||||||||||| ||||||||||    
T  694318 aacattttaggtttatttaataaattatgtatgtggtctataataaagatcat 694266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 10495250 - 10495290
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  10495250 ttcattcaataaatgatgtatgtggtttatattatagatca 10495290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 13356245 - 13356213
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    |||||||||||||||||||||||||||||||||    
T  13356245 ttttaagttcattcaataaatgatgtatgtggt 13356213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 15965988 - 15966028
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  15965988 ttttaggttcattcaattaatgatgtatgtggtctatatta 15966028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 18942094 - 18942054
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  18942094 ttttaggttcattcaattaatgatgtatgtggtctatatta 18942054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 22584340 - 22584300
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  22584340 ttttaggttcattcaattaatgatgtatgtggtctatatta 22584300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 23421016 - 23420980
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctat 184  Q
    ||||||||||||||||||||||||||||| |||||||    
T  23421016 ttttaagttcattcaataaatgatgtatgcggtctat 23420980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 24089074 - 24089114
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| |||||||||||||||||||||||||||| ||||||    
T  24089074 ttttaggttcattcaataaatgatgtatgtggtccatatta 24089114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 186
Target Start/End: Original strand, 1098667 - 1098698
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||||||||||||||||||||||||||||||    
T  1098667 ttcattcaataaatgatgtatgtggtctatat 1098698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 1100086 - 1100133
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||||  |||||||| |||||||||||||||||||||| ||||||    
T  1100086 acattttagattcattcattaaatgatgtatgtggtctataataaaga 1100133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 14153480 - 14153429
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| ||||||||| | |||||| ||||||||||||| ||||||||||    
T  14153480 acattttaggttcattcatttaatgatatatgtggtctataataaagatcat 14153429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 195
Target Start/End: Complemental strand, 17096551 - 17096504
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaaagatca 195  Q
    ||||| ||||||||||| ||||||||||||||| ||||||| ||||||    
T  17096551 ttttaggttcattcaatcaatgatgtatgtggtttatattatagatca 17096504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 36897771 - 36897818
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    ||||||||| |||||| ||||||||||||||||||| |||| ||||||    
T  36897771 acattttaaattcattaaataaatgatgtatgtggtttataataaaga 36897818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 7313938 - 7313900
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||| ||||| |||||||||||||||||||||||||||    
T  7313938 ttttaggttcaatcaataaatgatgtatgtggtctatat 7313900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 13654541 - 13654579
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  13654541 ttttaggttcattcaataaatgatgtatgtggtccatat 13654579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 188
Target Start/End: Original strand, 15966669 - 15966715
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||| ||||||||||| ||||||||||||||| |||||||    
T  15966669 ttaactttttaggttcattcaattaatgatgtatgtggtttatatta 15966715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 28518820 - 28518782
Alignment:
Q  158 attcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    ||||| |||||||||||||||||||||| ||||||||||    
T  28518820 attcattaaatgatgtatgtggtctataataaagatcat 28518782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 151 - 185
Target Start/End: Original strand, 33728911 - 33728945
Alignment:
Q  151 taagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||||||||||||||||||||||||| |||||||    
T  33728911 taagttcattcaataaatgatgtatgttgtctata 33728945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 1023758 - 1023721
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||| ||||||||||||||||||||||||    
T  1023758 ttttaggttcattgaataaatgatgtatgtggtctata 1023721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 2673879 - 2673916
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| || |||||||||||||||||||||||||||||    
T  2673879 ttttaggtacattcaataaatgatgtatgtggtctata 2673916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 5259416 - 5259461
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||| ||||||||| | |||||||||||||||||||| ||||||    
T  5259416 attttaggttcattcatttaatgatgtatgtggtctataataaaga 5259461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 6279442 - 6279479
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||| ||||||||||||||||||||||    
T  6279442 ttttaggttcattcactaaatgatgtatgtggtctata 6279479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 470
Target Start/End: Original strand, 12822119 - 12822215
Alignment:
Q  376 ttgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttattccaagtccagagacaagtttcgagaaagaaa 470  Q
    |||| ||||||||||| |||||  || ||||| | | ||||||||||||||||||||| |||| || |||||||  | ||||||||| | |||||||    
T  12822119 ttggaaagacaatggaagaagattcacgaggcctcttaagatattacaaagtggagaagttttgtttcaagtcccaaaacaagtttcaataaagaaa 12822215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 18033386 - 18033431
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||| ||||||||| | |||||||||||||||||||| ||||||    
T  18033386 attttaggttcattcatttaatgatgtatgtggtctataataaaga 18033431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 397
Target Start/End: Complemental strand, 18044559 - 18044514
Alignment:
Q  352 caaagcaaagcaccacatgaagaattgggaagacaatggatgaaga 397  Q
    ||||| ||| |||| |||||||||||||||||||||||||| ||||    
T  18044559 caaaggaaaacacctcatgaagaattgggaagacaatggataaaga 18044514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 24089150 - 24089113
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||||||||||| ||||||||||||    
T  24089150 ttttaggttcattcaataaatgatgaatgtggtctata 24089113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 34820657 - 34820694
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||||||||||||| | ||||||||||||||||||||    
T  34820657 ttttaagttcattcatttaatgatgtatgtggtctata 34820694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 36346903 - 36346866
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||||||||||||||| ||||||||||||||| ||||    
T  36346903 ttttaagttcattcaattaatgatgtatgtggtttata 36346866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 187
Target Start/End: Original strand, 919685 - 919717
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatt 187  Q
    ||||||||||||||||||||| |||||||||||    
T  919685 ttcattcaataaatgatgtatttggtctatatt 919717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 4162911 - 4162871
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  4162911 ttttaggttcattcatttaatgatgtatgtggtctatatta 4162871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 191
Target Start/End: Original strand, 5504408 - 5504452
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatattaaag 191  Q
    ||||||| |||||||| |||||||||||| ||||||||| |||||    
T  5504408 attttaaattcattcattaaatgatgtatttggtctataataaag 5504452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 152 - 188
Target Start/End: Original strand, 7336891 - 7336927
Alignment:
Q  152 aagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  7336891 aagttcattcaattaatgatgtatgtggtccatatta 7336927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 11784394 - 11784354
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| ||||||||||||| | |||||||    
T  11784394 ttttaagttcattcaattaatgatgtatgtgatgtatatta 11784354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 12922480 - 12922440
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||| ||||||||||||||||| ||| ||||||||||||    
T  12922480 ttttaaattcattcaataaatgatatatttggtctatatta 12922440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 14064842 - 14064882
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  14064842 ttttaggttcattcaattaatgatgtatgtggtccatatta 14064882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 15385850 - 15385882
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  15385850 ttttaagttcattcaattaatgatgtatgtggt 15385882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 15385918 - 15385886
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  15385918 ttttaagttcattcaattaatgatgtatgtggt 15385886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 331
Target Start/End: Original strand, 15492257 - 15492313
Alignment:
Q  275 atgttttcatcttgaatcatgtactttttgttttcttgaaaccaaacaattcttaga 331  Q
    |||||||||| |||| ||||||| |||| ||||| | ||||||||||| ||||||||    
T  15492257 atgttttcattttgagtcatgtaattttagttttttcgaaaccaaacagttcttaga 15492313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 18003965 - 18003925
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  18003965 ttttaggttcattcatttaatgatgtatgtggtctatatta 18003925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 21152696 - 21152656
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  21152696 ttttaggttcattcaattaatgatgtatgtggtccatatta 21152656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 21159831 - 21159791
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  21159831 ttttaggttcattcaattaatgatgtatgtggtccatatta 21159791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 21163638 - 21163598
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  21163638 ttttaggttcattcaattaatgatgtatgtggtccatatta 21163598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 25408644 - 25408612
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatt 187  Q
    |||||||||||||||||||||||||||| ||||    
T  25408644 ttcattcaataaatgatgtatgtggtctttatt 25408612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 184
Target Start/End: Complemental strand, 25777012 - 25776976
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctat 184  Q
    ||||||||||||||||||||||||  |||||||||||    
T  25777012 ttttaagttcattcaataaatgataaatgtggtctat 25776976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 30489204 - 30489164
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    |||||| |||||||||| |||||| ||||||||||||||||    
T  30489204 ttttaaattcattcaattaatgatatatgtggtctatatta 30489164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 30893877 - 30893845
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatt 187  Q
    |||||||||||||||||||||||||||| ||||    
T  30893877 ttcattcaataaatgatgtatgtggtctttatt 30893845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 184
Target Start/End: Original strand, 32198892 - 32198928
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctat 184  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  32198892 ttttaagtttattcaataaataatgtatgtggtctat 32198928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 35067951 - 35067991
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||| ||||||||||    
T  35067951 ttttaggttcattcaattaatgatgtatgtagtctatatta 35067991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 36329188 - 36329156
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  36329188 ttttaagttcattcaattaatgatgtatgtggt 36329156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 37554379 - 37554411
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  37554379 ttttaagttcattcaattaatgatgtatgtggt 37554411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 37685002 - 37685034
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  37685002 ttttaagttcattcaattaatgatgtatgtggt 37685034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 43340447 - 43340487
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  43340447 ttttaggttcattcaattaatgatgtatgtggtccatatta 43340487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 341 - 474
Target Start/End: Original strand, 7487601 - 7487730
Alignment:
Q  341 atgtaattcagcaaagcaaagcaccacatgaagaattgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttat 438  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||    |||||||  ||| || | ||| |||| |||| |||||||| ||||| |||    
T  7487601 atgtaattcggcaaagcaaaccacctcatgaagaattgggaagaca----atgaagattcaaaagacctataaagacattataaagtggataaattctat 7487696  T
Q  439 tccaagtccagagacaagtttcgagaaagaaagcac 474  Q
    |||||||||  |||||  |||| |||||||||||||    
T  7487697 tccaagtcccaagaca--tttcaagaaagaaagcac 7487730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 37897794 - 37897742
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||| |||||||| ||||| |||||||||||||||| ||||||||||    
T  37897794 aacattttaaattcattcattaaattatgtatgtggtctataataaagatcat 37897742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 12047274 - 12047321
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||||||||||| | |||||||||||||||||||| ||||||    
T  12047274 acattttaagttcattcatttaatgatgtatgtggtctataataaaga 12047321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 193
Target Start/End: Original strand, 52866443 - 52866494
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagat 193  Q
    |||||||||||  |||||||| |||||||||||||||||||||| |||||||    
T  52866443 ttaacattttagattcattcattaaatgatgtatgtggtctataataaagat 52866494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 148 - 186
Target Start/End: Original strand, 1086541 - 1086579
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  1086541 ttttaagttcattcaataaatgatgtatgtggtatatat 1086579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 184
Target Start/End: Complemental strand, 40639823 - 40639781
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctat 184  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  40639823 ttaacattttaaattcattcattaaatgatgtatgtggtctat 40639781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Complemental strand, 52216026 - 52215940
Alignment:
Q  108 gtacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    ||||||| |||||||||||||||||||       | |||||||||  |||| ||| |||||||||||||||||||||| ||||||||||    
T  52216026 gtacaccctccggtcactattataagcaaaaa--tcaacattttagattcactcattaaatgatgtatgtggtctataataaagatcat 52215940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 154 - 187
Target Start/End: Original strand, 39009873 - 39009906
Alignment:
Q  154 gttcattcaataaatgatgtatgtggtctatatt 187  Q
    ||||||||||||||||||||||||||||||||||    
T  39009873 gttcattcaataaatgatgtatgtggtctatatt 39009906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 148 - 189
Target Start/End: Original strand, 39682641 - 39682682
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaa 189  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  39682641 ttttaggttcattgaataaatgatgtatgtggtctatattaa 39682682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 45736726 - 45736767
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  45736726 ttcattcattaaatgatgtatgtggtctataataaagatcat 45736767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 12109945 - 12109893
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||  |||||||| ||| |||||||||||||||||| ||||||||||    
T  12109945 aacattttagtttcattcattaattgatgtatgtggtctataataaagatcat 12109893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 18409329 - 18409293
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtcta 183  Q
    |||||| ||||||||||||||||||||||||||||||    
T  18409329 attttaggttcattcaataaatgatgtatgtggtcta 18409293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 39289593 - 39289633
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| |||||||||||||||| ||||||    
T  39289593 ttttaagttcattcaattaatgatgtatgtggtccatatta 39289633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 186
Target Start/End: Complemental strand, 2128462 - 2128431
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||||||||||||||||||||||||||||||    
T  2128462 ttcattcaataaatgatgtatgtggtctatat 2128431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 8439287 - 8439334
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  8439287 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 8439334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 25881247 - 25881200
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| ||||||||| | |||||||||||||||||||| ||||||    
T  25881247 acattttaggttcattcatttaatgatgtatgtggtctataataaaga 25881200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 155 - 186
Target Start/End: Complemental strand, 39836966 - 39836935
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||||||||||||||||||||||||||||||    
T  39836966 ttcattcaataaatgatgtatgtggtctatat 39836935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 179
Target Start/End: Complemental strand, 50603621 - 50603590
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtgg 179  Q
    ||||||||||||||||||||||||||||||||    
T  50603621 ttttaagttcattcaataaatgatgtatgtgg 50603590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 186
Target Start/End: Complemental strand, 4190736 - 4190698
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatat 186  Q
    ||||| ||||||||||||||||||||||| |||||||||    
T  4190736 ttttaggttcattcaataaatgatgtatgaggtctatat 4190698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 12745015 - 12744965
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||||  | |||||| |||||||||||||||||||||| ||||||    
T  12745015 ttaacattttagatacattcattaaatgatgtatgtggtctataataaaga 12744965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 19811000 - 19810954
Alignment:
Q  146 cattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| |||||||| ||||||||||||||||| |||| ||||||    
T  19811000 cattttaaattcattcattaaatgatgtatgtggtttataataaaga 19810954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 189
Target Start/End: Complemental strand, 26367576 - 26367542
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaa 189  Q
    |||||||||||||||||||||||||||| ||||||    
T  26367576 ttcattcaataaatgatgtatgtggtctttattaa 26367542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Original strand, 45502749 - 45502783
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtct 182  Q
    ||||| |||||||||||||||||||||||||||||    
T  45502749 ttttaggttcattcaataaatgatgtatgtggtct 45502783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 148 - 182
Target Start/End: Complemental strand, 45502819 - 45502785
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtct 182  Q
    ||||| |||||||||||||||||||||||||||||    
T  45502819 ttttaggttcattcaataaatgatgtatgtggtct 45502785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 48191741 - 48191791
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||||||  |||||||| ||||||||||||||||| |||| ||||||    
T  48191741 ttaacattttagattcattcattaaatgatgtatgtggtttataataaaga 48191791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 182
Target Start/End: Complemental strand, 16867443 - 16867406
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtct 182  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  16867443 acattttaggttcattcaattaatgatgtatgtggtct 16867406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 17005068 - 17005031
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  17005068 ttttaggttcattcaattaatgatgtatgtggtctata 17005031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 22528884 - 22528921
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  22528884 ttttaggttcattcaatcaatgatgtatgtggtctata 22528921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 155 - 188
Target Start/End: Complemental strand, 29241581 - 29241548
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||||||| ||||||||||||    
T  29241581 ttcattcaataaatgatgtatttggtctatatta 29241548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 36458662 - 36458699
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  36458662 ttttaggttcattcaataaaagatgtatgtggtctata 36458699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 40639907 - 40639866
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctata 185  Q
    |||||||||| || ||||| ||||||||||||||||||||||    
T  40639907 aacattttaaatttattcattaaatgatgtatgtggtctata 40639866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 181
Target Start/End: Original strand, 50603557 - 50603590
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtc 181  Q
    |||||| |||||||||||||||||||||||||||    
T  50603557 ttttaaattcattcaataaatgatgtatgtggtc 50603590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 53739475 - 53739512
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  53739475 ttttaggttcattcaataaatgatgtatgcggtctata 53739512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 54595785 - 54595866
Alignment:
Q  109 tacaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaaga 192  Q
    |||||||| |||||||||||||||||       | |||||||||  |||||||| |||||||||||||||||| ||| ||||||    
T  54595785 tacaccatacggtcactattataagcaaaaa--tcaacattttagattcattcattaaatgatgtatgtggtcgataataaaga 54595866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 1927533 - 1927573
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| | |||||||||||||||| ||||||    
T  1927533 ttttaagttcattcatttaatgatgtatgtggtccatatta 1927573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 147 - 187
Target Start/End: Original strand, 7981176 - 7981216
Alignment:
Q  147 attttaagttcattcaataaatgatgtatgtggtctatatt 187  Q
    |||||| ||||||||||||||||||| ||||||||| ||||    
T  7981176 attttaggttcattcaataaatgatgcatgtggtctttatt 7981216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 10344431 - 10344399
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  10344431 ttttaagttcattcaattaatgatgtatgtggt 10344399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 13927427 - 13927467
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  13927427 ttttaggttcattcatttaatgatgtatgtggtctatatta 13927467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 16127780 - 16127820
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  16127780 ttttaggttcattcaattaatgatgtatgtggtccatatta 16127820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 21659246 - 21659206
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||| ||||||||||||||||    
T  21659246 ttttaggttcattcaattaatgatatatgtggtctatatta 21659206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Complemental strand, 26043358 - 26043326
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  26043358 ttttaagttcattcaattaatgatgtatgtggt 26043326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 187
Target Start/End: Complemental strand, 27707279 - 27707247
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatatt 187  Q
    |||||||||||||||||||||||||||| ||||    
T  27707279 ttcattcaataaatgatgtatgtggtctttatt 27707247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 29222831 - 29222883
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||  |||||| | |||||||||||||| ||||||| ||||||||||    
T  29222831 aacattttagattcatttattaaatgatgtatgttgtctataataaagatcat 29222883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 35455671 - 35455631
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  35455671 ttttaggttcattcatttaatgatgtatgtggtctatatta 35455631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 37331631 - 37331671
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| |||||||||||||||||| ||||||    
T  37331631 ttttaggttcattcattaaatgatgtatgtggtccatatta 37331671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 180
Target Start/End: Original strand, 39530427 - 39530459
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggt 180  Q
    ||||||||||||||||| |||||||||||||||    
T  39530427 ttttaagttcattcaattaatgatgtatgtggt 39530459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 44435282 - 44435242
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  44435282 ttttaggttcattcaattaatgatgtatgtggtccatatta 44435242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 46739415 - 46739375
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| ||| ||||||||| |||||||||    
T  46739415 ttttaagttcattcaattaataatgtatgtgatctatatta 46739375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 53718005 - 53717965
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  53718005 ttttaggttcattcaattaatgatgtatgtggtccatatta 53717965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 53739551 - 53739511
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||||||||||| |||||||| ||||||    
T  53739551 ttttaggttcattcaataaatgatgcatgtggtccatatta 53739511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 142 - 194
Target Start/End: Original strand, 54783403 - 54783455
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatc 194  Q
    |||||||||||  |||||| | ||| |||||||||||||||||| ||||||||    
T  54783403 ttaacattttagattcattaattaattgatgtatgtggtctataataaagatc 54783455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 5420 - 5460
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  5420 ttttaagttcattcaattaatgatgtatgtggtctatatta 5460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 110 - 193
Target Start/End: Complemental strand, 24750 - 24669
Alignment:
Q  110 acaccatccggtcactattataagcnnnnnnnttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagat 193  Q
    ||||| |||||||||||||||||||       |||| ||||||  |||||||| |||||||||||||||||||||| |||||||    
T  24750 acaccctccggtcactattataagcaaaaa--ttaatattttagattcattcattaaatgatgtatgtggtctataataaagat 24669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 17466 - 17506
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||||||||||||| | |||||||||||||||||||||||    
T  17466 ttttaagttcattcatttaatgatgtatgtggtctatatta 17506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 33; Significance: 0.000000004; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 38115 - 38075
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||||||||||    
T  38115 ttttaggttcattcaattaatgatgtatgtggtctatatta 38075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 38425 - 38384
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatattaa 189  Q
    |||||| |||||||||| ||||||||||||| ||||||||||    
T  38425 ttttaaattcattcaattaatgatgtatgtgatctatattaa 38384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 145 - 196
Target Start/End: Complemental strand, 139407 - 139356
Alignment:
Q  145 acattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    ||||||||  |||||||| | |||||||||||||||||||| ||||||||||    
T  139407 acattttagattcattcatttaatgatgtatgtggtctataataaagatcat 139356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 142 - 181
Target Start/End: Original strand, 58326 - 58365
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtc 181  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  58326 ttaactttttaagttcattcaatcaatgatgtatgtggtc 58365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 155 - 185
Target Start/End: Complemental strand, 231 - 201
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctata 185  Q
    |||||||||||||||||||||||||||||||    
T  231 ttcattcaataaatgatgtatgtggtctata 201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 344 - 459
Target Start/End: Original strand, 1545 - 1662
Alignment:
Q  344 taattcagcaaagcaaagcaccacatgaagaattgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttattcc 441  Q
    |||||||||||| |||  |||| ||||||||||| |||||||| || |||||||  |||||||  |||||||| ||||||| |||  || ||| |||  |    
T  1545 taattcagcaaaacaagacaccccatgaagaatttggaagacattgaatgaagattcaagaggtctatgaagacattacaaggtgaggacattctatctc 1644  T
Q  442 aagtccagagacaagttt 459  Q
    ||||||  ||||||||||    
T  1645 aagtcccaagacaagttt 1662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 196
Target Start/End: Complemental strand, 216387 - 216333
Alignment:
Q  142 ttaacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||||| || ||||| |||||||||||||| || |||| ||||||||||    
T  216387 ttaacattttaaattaattcattaaatgatgtatgtcgtttataataaagatcat 216333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1122 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1122
Description:

Target: scaffold1122; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 470
Target Start/End: Complemental strand, 1943 - 1847
Alignment:
Q  376 ttgggaagacaatggatgaaga--caagaggcatatgaagatattacaaagtggagaaattttattccaagtccagagacaagtttcgagaaagaaa 470  Q
    |||| ||||||||||| |||||  || ||||| | | ||||||||||||||||||||| |||| || |||||||  | ||||||||| | |||||||    
T  1943 ttggaaagacaatggaagaagattcacgaggcctcttaagatattacaaagtggagaagttttgtttcaagtcccaaaacaagtttcaataaagaaa 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0756 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0756
Description:

Target: scaffold0756; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 3626 - 3589
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  3626 ttttaggttcattcaatcaatgatgtatgtggtctata 3589  T

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Target: scaffold0542 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Original strand, 3446 - 3483
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  3446 ttttaggttcattcaatcaatgatgtatgtggtctata 3483  T

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Target: scaffold0172 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 185
Target Start/End: Complemental strand, 11692 - 11655
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctata 185  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  11692 ttttaggttcattcaattaatgatgtatgtggtctata 11655  T

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Target: scaffold0172; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 11616 - 11656
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||||| |||||||||||||||| ||||||    
T  11616 ttttaggttcattcaattaatgatgtatgtggtccatatta 11656  T

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Target: scaffold0321 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 188
Target Start/End: Complemental strand, 1741 - 1701
Alignment:
Q  148 ttttaagttcattcaataaatgatgtatgtggtctatatta 188  Q
    ||||| ||||||||| | |||||||||||||||||||||||    
T  1741 ttttaggttcattcatttaatgatgtatgtggtctatatta 1701  T

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Target: scaffold0113 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 40481 - 40533
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||  || ||||| ||||||||||||| |||||||| ||||||||||    
T  40481 aacattttagatttattcattaaatgatgtatgcggtctataataaagatcat 40533  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 89626 - 89678
Alignment:
Q  144 aacattttaagttcattcaataaatgatgtatgtggtctatattaaagatcat 196  Q
    |||||||||  ||| |||| ||||||||||||||| |||||| ||||||||||    
T  89626 aacattttagattctttcattaaatgatgtatgtgatctataataaagatcat 89678  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 154011 - 153975
Alignment:
Q  155 ttcattcaataaatgatgtatgtggtctatattaaag 191  Q
    |||||| ||||||||||||||||||||||||| ||||    
T  154011 ttcatttaataaatgatgtatgtggtctatataaaag 153975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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