View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0852_low_13 (Length: 475)

Name: NF0852_low_13
Description: NF0852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0852_low_13
NF0852_low_13
[»] chr6 (35 HSPs)
chr6 (164-407)||(22702948-22703191)
chr6 (164-394)||(22697772-22698002)
chr6 (164-407)||(21402011-21402254)
chr6 (164-334)||(29490812-29490982)
chr6 (164-311)||(2817401-2817548)
chr6 (164-311)||(34142781-34142928)
chr6 (164-311)||(34155397-34155544)
chr6 (1-94)||(11185817-11185910)
chr6 (164-311)||(6727777-6727924)
chr6 (164-311)||(34376464-34376611)
chr6 (164-311)||(24190654-24190802)
chr6 (4-94)||(22831820-22831910)
chr6 (164-311)||(31983475-31983622)
chr6 (4-84)||(18821542-18821622)
chr6 (4-89)||(20360678-20360763)
chr6 (4-89)||(20638001-20638086)
chr6 (322-394)||(31981832-31981904)
chr6 (6-89)||(16920351-16920434)
chr6 (322-394)||(34376198-34376270)
chr6 (114-160)||(22699738-22699784)
chr6 (322-394)||(24191126-24191198)
chr6 (322-394)||(24192223-24192295)
chr6 (334-394)||(34142358-34142418)
chr6 (334-394)||(34154974-34155034)
chr6 (322-375)||(6728193-6728246)
chr6 (322-394)||(2817901-2817973)
chr6 (351-407)||(29491005-29491061)
chr6 (4-63)||(19303284-19303343)
chr6 (5-47)||(18409586-18409628)
chr6 (4-59)||(20594092-20594147)
chr6 (4-63)||(22779971-22780030)
chr6 (4-63)||(28496216-28496275)
chr6 (4-51)||(29808639-29808686)
chr6 (4-49)||(25611481-25611526)
chr6 (1-49)||(25603143-25603191)
[»] chr5 (38 HSPs)
chr5 (164-407)||(17510328-17510571)
chr5 (164-407)||(42019843-42020086)
chr5 (190-407)||(17505223-17505440)
chr5 (164-407)||(42024623-42024866)
chr5 (190-407)||(43579930-43580147)
chr5 (190-402)||(41858861-41859071)
chr5 (190-300)||(41853846-41853956)
chr5 (191-311)||(1413100-1413220)
chr5 (190-311)||(36254517-36254638)
chr5 (164-311)||(24770605-24770752)
chr5 (195-311)||(26709688-26709804)
chr5 (195-311)||(26979422-26979538)
chr5 (221-311)||(24776116-24776206)
chr5 (4-89)||(21292688-21292773)
chr5 (4-89)||(22107091-22107176)
chr5 (322-394)||(1413806-1413878)
chr5 (4-89)||(8286560-8286645)
chr5 (114-160)||(17508630-17508676)
chr5 (114-160)||(41857149-41857195)
chr5 (114-160)||(42023542-42023588)
chr5 (4-89)||(22075337-22075422)
chr5 (322-394)||(24776563-24776635)
chr5 (4-63)||(13095813-13095872)
chr5 (114-160)||(24772849-24772895)
chr5 (322-394)||(26709372-26709444)
chr5 (322-394)||(26979106-26979178)
chr5 (322-394)||(36254105-36254177)
chr5 (4-63)||(13025629-13025688)
chr5 (4-63)||(21985890-21985949)
chr5 (1-63)||(24493884-24493946)
chr5 (4-47)||(9078271-9078314)
chr5 (4-63)||(24529539-24529598)
chr5 (1-41)||(21565860-21565900)
chr5 (322-394)||(24771108-24771180)
chr5 (5-63)||(23390240-23390298)
chr5 (4-41)||(1096786-1096823)
chr5 (4-41)||(11581010-11581047)
chr5 (1-41)||(21741308-21741348)
[»] chr4 (51 HSPs)
chr4 (164-407)||(8984987-8985230)
chr4 (164-407)||(13700780-13701023)
chr4 (164-407)||(21304535-21304778)
chr4 (164-407)||(8979867-8980110)
chr4 (164-407)||(21299415-21299658)
chr4 (164-407)||(54991746-54991989)
chr4 (190-394)||(39999405-39999609)
chr4 (190-394)||(40004363-40004567)
chr4 (190-394)||(54343539-54343743)
chr4 (190-394)||(54348693-54348897)
chr4 (164-407)||(54990392-54990635)
chr4 (190-394)||(36359664-36359868)
chr4 (190-394)||(36354478-36354682)
chr4 (190-311)||(53798329-53798450)
chr4 (164-311)||(41393858-41394005)
chr4 (190-311)||(51018732-51018853)
chr4 (164-311)||(9763273-9763420)
chr4 (164-311)||(13695757-13695904)
chr4 (164-311)||(13711370-13711517)
chr4 (164-311)||(4207042-4207188)
chr4 (191-311)||(47045647-47045767)
chr4 (4-89)||(7089195-7089280)
chr4 (4-89)||(3096961-3097046)
chr4 (4-89)||(12903075-12903160)
chr4 (322-394)||(13695431-13695503)
chr4 (6-89)||(14053020-14053103)
chr4 (322-394)||(9763771-9763843)
chr4 (4-84)||(17047796-17047875)
chr4 (322-394)||(41393512-41393584)
chr4 (322-394)||(53797898-53797970)
chr4 (114-160)||(13699067-13699113)
chr4 (114-160)||(21301325-21301371)
chr4 (114-160)||(36357870-36357916)
chr4 (114-160)||(40002798-40002844)
chr4 (312-394)||(51019117-51019199)
chr4 (114-160)||(54346932-54346978)
chr4 (322-394)||(13710938-13711010)
chr4 (322-394)||(47046060-47046132)
chr4 (114-160)||(8981777-8981823)
chr4 (114-160)||(13702945-13702991)
chr4 (5-58)||(7894020-7894073)
chr4 (4-58)||(44053147-44053201)
chr4 (5-57)||(16377271-16377323)
chr4 (4-47)||(7799015-7799058)
chr4 (4-63)||(15091215-15091274)
chr4 (5-63)||(22636753-22636811)
chr4 (4-41)||(23374125-23374162)
chr4 (4-63)||(14038967-14039026)
chr4 (4-42)||(12774318-12774356)
chr4 (4-41)||(39706052-39706089)
chr4 (4-41)||(44102529-44102566)
[»] chr1 (31 HSPs)
chr1 (164-407)||(27711593-27711836)
chr1 (190-407)||(37404026-37404243)
chr1 (190-407)||(37409145-37409362)
chr1 (190-393)||(34317840-34318043)
chr1 (190-407)||(27716713-27716930)
chr1 (190-394)||(36684270-36684474)
chr1 (190-407)||(11250731-11250948)
chr1 (164-311)||(5725365-5725512)
chr1 (164-311)||(3585301-3585448)
chr1 (165-311)||(5730771-5730917)
chr1 (190-311)||(48245998-48246119)
chr1 (190-249)||(50959010-50959069)
chr1 (4-89)||(38801109-38801194)
chr1 (14-89)||(22355892-22355967)
chr1 (14-89)||(22357578-22357653)
chr1 (4-89)||(21026998-21027083)
chr1 (4-89)||(27250447-27250532)
chr1 (114-160)||(27715000-27715046)
chr1 (4-89)||(20846937-20847022)
chr1 (322-394)||(5730374-5730446)
chr1 (322-394)||(3584870-3584942)
chr1 (4-63)||(22354316-22354375)
chr1 (4-63)||(50209956-50210015)
chr1 (114-160)||(37405908-37405954)
chr1 (312-394)||(48246427-48246509)
chr1 (114-160)||(5728674-5728721)
chr1 (5-41)||(34510100-34510136)
chr1 (4-51)||(433326-433373)
chr1 (4-42)||(21754355-21754393)
chr1 (4-41)||(33681328-33681365)
chr1 (4-41)||(52927746-52927783)
[»] scaffold0517 (2 HSPs)
scaffold0517 (190-407)||(3833-4050)
scaffold0517 (114-160)||(2120-2166)
[»] chr7 (41 HSPs)
chr7 (164-394)||(33238338-33238568)
chr7 (164-394)||(33243515-33243745)
chr7 (190-394)||(47994136-47994340)
chr7 (190-394)||(47999311-47999515)
chr7 (164-311)||(21080321-21080468)
chr7 (190-311)||(2233978-2234099)
chr7 (164-311)||(32211965-32212112)
chr7 (164-311)||(42572600-42572747)
chr7 (190-311)||(17496100-17496221)
chr7 (190-311)||(17556993-17557114)
chr7 (164-311)||(12935084-12935231)
chr7 (164-311)||(19308876-19309023)
chr7 (164-311)||(47176496-47176643)
chr7 (190-304)||(16538699-16538813)
chr7 (190-304)||(16626849-16626963)
chr7 (164-311)||(43893542-43893689)
chr7 (4-89)||(16385965-16386050)
chr7 (4-82)||(27847558-27847636)
chr7 (4-82)||(40443707-40443784)
chr7 (164-243)||(47544749-47544828)
chr7 (322-394)||(2234384-2234456)
chr7 (4-89)||(26212314-26212399)
chr7 (322-394)||(12934666-12934738)
chr7 (114-160)||(33241732-33241778)
chr7 (114-160)||(47997529-47997575)
chr7 (322-394)||(19309365-19309437)
chr7 (322-394)||(21080793-21080865)
chr7 (322-394)||(42572214-42572286)
chr7 (322-394)||(43893138-43893210)
chr7 (322-394)||(16539166-16539238)
chr7 (322-394)||(16626424-16626496)
chr7 (322-394)||(17495672-17495744)
chr7 (322-394)||(17557470-17557542)
chr7 (322-394)||(47176904-47176976)
chr7 (4-63)||(9509507-9509566)
chr7 (4-63)||(38227799-38227858)
chr7 (1-51)||(12699147-12699197)
chr7 (334-394)||(32212419-32212479)
chr7 (4-51)||(44116824-44116871)
chr7 (4-57)||(15143786-15143839)
chr7 (4-41)||(22073235-22073272)
[»] chr3 (47 HSPs)
chr3 (190-407)||(55129060-55129276)
chr3 (197-407)||(17368989-17369199)
chr3 (164-394)||(20090191-20090421)
chr3 (164-394)||(20095316-20095546)
chr3 (190-394)||(15762585-15762789)
chr3 (190-394)||(15767746-15767950)
chr3 (164-311)||(3481649-3481796)
chr3 (190-311)||(34128437-34128558)
chr3 (190-311)||(17358566-17358686)
chr3 (190-311)||(30338126-30338247)
chr3 (164-311)||(30341204-30341351)
chr3 (190-311)||(54271312-54271433)
chr3 (221-311)||(3476249-3476339)
chr3 (221-311)||(4117007-4117097)
chr3 (4-89)||(20698154-20698239)
chr3 (322-394)||(3482166-3482238)
chr3 (322-394)||(17358107-17358179)
chr3 (322-394)||(54270914-54270986)
chr3 (114-160)||(3478439-3478485)
chr3 (114-160)||(15764511-15764557)
chr3 (114-160)||(17362634-17362680)
chr3 (114-160)||(17367276-17367322)
chr3 (114-160)||(20092142-20092188)
chr3 (322-394)||(4117345-4117417)
chr3 (17-89)||(16809731-16809803)
chr3 (322-394)||(30338506-30338578)
chr3 (322-394)||(34128923-34128995)
chr3 (4-63)||(26687205-26687264)
chr3 (4-57)||(40213470-40213523)
chr3 (322-394)||(3476699-3476771)
chr3 (4-63)||(13442592-13442651)
chr3 (4-57)||(14973173-14973226)
chr3 (322-394)||(10321712-10321784)
chr3 (5-72)||(12399525-12399592)
chr3 (4-63)||(17488175-17488234)
chr3 (4-63)||(43841250-43841309)
chr3 (1-41)||(15471241-15471281)
chr3 (4-51)||(17248041-17248088)
chr3 (4-63)||(18438853-18438912)
chr3 (322-373)||(30341720-30341771)
chr3 (4-42)||(1644446-1644484)
chr3 (4-89)||(30030157-30030242)
chr3 (4-42)||(32307988-32308026)
chr3 (4-42)||(49667847-49667885)
chr3 (347-392)||(10321816-10321861)
chr3 (4-41)||(11424528-11424565)
chr3 (4-41)||(14234810-14234847)
[»] scaffold0014 (3 HSPs)
scaffold0014 (190-394)||(31881-32085)
scaffold0014 (190-394)||(26709-26913)
scaffold0014 (114-160)||(30102-30148)
[»] chr2 (26 HSPs)
chr2 (164-407)||(40392589-40392832)
chr2 (190-394)||(42728175-42728379)
chr2 (191-394)||(42723007-42723210)
chr2 (190-394)||(44096638-44096842)
chr2 (190-381)||(44754161-44754352)
chr2 (190-381)||(44759327-44759518)
chr2 (190-407)||(40518075-40518297)
chr2 (193-381)||(40519929-40520122)
chr2 (164-311)||(4162895-4163042)
chr2 (164-311)||(28751021-28751168)
chr2 (4-84)||(37839-37919)
chr2 (4-89)||(20309423-20309508)
chr2 (19-89)||(23654117-23654187)
chr2 (114-160)||(42724940-42724986)
chr2 (114-160)||(44756092-44756138)
chr2 (4-89)||(23286179-23286264)
chr2 (322-394)||(4163331-4163403)
chr2 (4-63)||(27753893-27753952)
chr2 (4-63)||(32451673-32451732)
chr2 (322-394)||(28751483-28751555)
chr2 (4-63)||(298558-298617)
chr2 (4-63)||(22737924-22737983)
chr2 (1-41)||(23660338-23660378)
chr2 (5-63)||(22730977-22731035)
chr2 (4-47)||(23076760-23076803)
chr2 (4-41)||(25176161-25176198)
[»] scaffold0055 (1 HSPs)
scaffold0055 (190-394)||(3360-3564)
[»] scaffold0052 (1 HSPs)
scaffold0052 (190-394)||(80971-81175)
[»] chr8 (38 HSPs)
chr8 (190-394)||(32010862-32011066)
chr8 (190-394)||(32016036-32016240)
chr8 (164-407)||(2165394-2165638)
chr8 (164-311)||(43998546-43998693)
chr8 (164-311)||(17955134-17955281)
chr8 (190-311)||(24885324-24885445)
chr8 (164-311)||(42513848-42513995)
chr8 (221-311)||(21641184-21641273)
chr8 (4-89)||(25362858-25362943)
chr8 (4-89)||(21918717-21918803)
chr8 (312-394)||(24884982-24885064)
chr8 (14-84)||(31971583-31971653)
chr8 (114-160)||(21645574-21645620)
chr8 (114-160)||(32014255-32014301)
chr8 (4-89)||(16199365-16199449)
chr8 (322-394)||(21643835-21643907)
chr8 (29-89)||(45130738-45130798)
chr8 (4-63)||(20536526-20536585)
chr8 (322-394)||(21643020-21643092)
chr8 (322-394)||(21643395-21643467)
chr8 (4-63)||(23406699-23406758)
chr8 (330-393)||(42514182-42514245)
chr8 (5-58)||(16092089-16092142)
chr8 (322-394)||(21641520-21641592)
chr8 (322-394)||(21641895-21641967)
chr8 (322-394)||(21642270-21642342)
chr8 (322-394)||(21642645-21642717)
chr8 (4-63)||(6759575-6759634)
chr8 (4-63)||(18878981-18879040)
chr8 (4-46)||(18818170-18818212)
chr8 (322-394)||(43998984-43999056)
chr8 (6-41)||(28648809-28648844)
chr8 (4-51)||(41598503-41598550)
chr8 (4-41)||(21674024-21674061)
chr8 (4-41)||(38855015-38855052)
chr8 (118-158)||(19434003-19434043)
chr8 (118-158)||(19570152-19570192)
chr8 (4-40)||(21923695-21923731)
[»] scaffold0594 (2 HSPs)
scaffold0594 (164-311)||(8534-8681)
scaffold0594 (322-394)||(8962-9034)
[»] scaffold0166 (5 HSPs)
scaffold0166 (164-311)||(12986-13133)
scaffold0166 (221-311)||(18500-18590)
scaffold0166 (114-160)||(15233-15279)
scaffold0166 (322-394)||(13493-13565)
scaffold0166 (322-394)||(18946-19018)
[»] scaffold0032 (1 HSPs)
scaffold0032 (4-89)||(51897-51982)
[»] scaffold0106 (2 HSPs)
scaffold0106 (4-94)||(1604-1694)
scaffold0106 (4-94)||(7581-7671)
[»] scaffold0598 (1 HSPs)
scaffold0598 (4-89)||(770-855)
[»] scaffold0456 (1 HSPs)
scaffold0456 (4-89)||(10144-10229)
[»] scaffold0358 (2 HSPs)
scaffold0358 (4-89)||(254-339)
scaffold0358 (4-89)||(5030-5115)
[»] scaffold0351 (1 HSPs)
scaffold0351 (4-89)||(16597-16682)
[»] scaffold0490 (1 HSPs)
scaffold0490 (4-84)||(2270-2350)
[»] scaffold0309 (1 HSPs)
scaffold0309 (4-84)||(6928-7008)
[»] scaffold0193 (1 HSPs)
scaffold0193 (4-89)||(13529-13614)
[»] scaffold0165 (3 HSPs)
scaffold0165 (4-89)||(3799-3884)
scaffold0165 (4-89)||(7863-7948)
scaffold0165 (114-160)||(15542-15588)
[»] scaffold0114 (1 HSPs)
scaffold0114 (4-89)||(15183-15268)
[»] scaffold0113 (1 HSPs)
scaffold0113 (4-89)||(32382-32467)
[»] scaffold0484 (1 HSPs)
scaffold0484 (5-89)||(1233-1317)
[»] scaffold0427 (1 HSPs)
scaffold0427 (4-76)||(13813-13885)
[»] scaffold0064 (1 HSPs)
scaffold0064 (4-84)||(47304-47384)
[»] scaffold1842 (1 HSPs)
scaffold1842 (4-82)||(774-852)
[»] scaffold0060 (2 HSPs)
scaffold0060 (253-311)||(37654-37712)
scaffold0060 (312-394)||(37279-37361)
[»] scaffold0011 (2 HSPs)
scaffold0011 (4-82)||(167704-167782)
scaffold0011 (4-63)||(52230-52289)
[»] scaffold0718 (1 HSPs)
scaffold0718 (4-89)||(4849-4934)
[»] scaffold0403 (1 HSPs)
scaffold0403 (4-89)||(5166-5251)
[»] scaffold0235 (1 HSPs)
scaffold0235 (4-89)||(11231-11316)
[»] scaffold0305 (1 HSPs)
scaffold0305 (4-63)||(20721-20780)
[»] scaffold0292 (1 HSPs)
scaffold0292 (4-63)||(3788-3847)
[»] scaffold0175 (1 HSPs)
scaffold0175 (4-63)||(13410-13469)
[»] scaffold0021 (1 HSPs)
scaffold0021 (4-63)||(124903-124962)
[»] scaffold0042 (1 HSPs)
scaffold0042 (4-63)||(24045-24104)
[»] scaffold0145 (1 HSPs)
scaffold0145 (4-49)||(39079-39124)
[»] scaffold0647 (1 HSPs)
scaffold0647 (3-50)||(5878-5925)
[»] scaffold0088 (1 HSPs)
scaffold0088 (1-40)||(21226-21265)
[»] scaffold0056 (1 HSPs)
scaffold0056 (4-63)||(16958-17017)
[»] scaffold0034 (2 HSPs)
scaffold0034 (4-63)||(51628-51687)
scaffold0034 (4-41)||(32855-32892)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-46)||(40175-40217)
[»] scaffold0639 (1 HSPs)
scaffold0639 (4-57)||(8793-8846)
[»] scaffold0217 (1 HSPs)
scaffold0217 (4-45)||(16361-16402)
[»] scaffold0141 (1 HSPs)
scaffold0141 (4-41)||(39795-39832)
[»] scaffold0122 (2 HSPs)
scaffold0122 (4-41)||(25830-25867)
scaffold0122 (4-63)||(33238-33297)
[»] scaffold0049 (1 HSPs)
scaffold0049 (4-41)||(74980-75017)
[»] scaffold0003 (1 HSPs)
scaffold0003 (4-57)||(339700-339753)
[»] scaffold0810 (1 HSPs)
scaffold0810 (1-41)||(3248-3288)
[»] scaffold0247 (1 HSPs)
scaffold0247 (4-40)||(6561-6597)
[»] scaffold0130 (1 HSPs)
scaffold0130 (4-47)||(28149-28192)
[»] scaffold0352 (1 HSPs)
scaffold0352 (21-63)||(17752-17794)
[»] scaffold0211 (1 HSPs)
scaffold0211 (4-42)||(28573-28611)
[»] scaffold0028 (1 HSPs)
scaffold0028 (4-42)||(132972-133010)
[»] scaffold0016 (1 HSPs)
scaffold0016 (5-63)||(2170-2228)
[»] scaffold1984 (1 HSPs)
scaffold1984 (4-41)||(449-486)
[»] scaffold0333 (2 HSPs)
scaffold0333 (4-41)||(6932-6969)
scaffold0333 (4-41)||(14312-14349)
[»] scaffold0142 (1 HSPs)
scaffold0142 (4-41)||(17099-17136)
[»] scaffold0138 (1 HSPs)
scaffold0138 (4-41)||(13259-13296)
[»] scaffold0102 (1 HSPs)
scaffold0102 (4-41)||(19585-19622)
[»] scaffold0080 (1 HSPs)
scaffold0080 (4-41)||(40231-40268)


Alignment Details
Target: chr6 (Bit Score: 215; Significance: 1e-118; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 164 - 407
Target Start/End: Original strand, 22702948 - 22703191
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22702948 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 22703047  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703048 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 22703147  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  22703148 tgagaatcgaatactcttctctggttttctctcctctcttctcc 22703191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 164 - 394
Target Start/End: Original strand, 22697772 - 22698002
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697772 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 22697871  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22697872 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 22697971  T
Q  364 tgagaatcgaatactcttatctggttttctc 394  Q
    |||||||||||||||||| ||||||||||||    
T  22697972 tgagaatcgaatactcttctctggttttctc 22698002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 164 - 407
Target Start/End: Complemental strand, 21402254 - 21402011
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21402254 ggaacactagtgtataatgaaaaaaacttggagtatagtagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21402155  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| |||||    
T  21402154 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagcttgggaatagtattcatcactcaaaaac 21402055  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    | |||||||||||||||| | |||||||||||||||||| ||||    
T  21402054 taagaatcgaatactcttctttggttttctctcctctcttctcc 21402011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 164 - 334
Target Start/End: Original strand, 29490812 - 29490982
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  29490812 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcttttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 29490911  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagag 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29490912 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagag 29490982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 2817401 - 2817548
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2817401 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 2817500  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  2817501 aattgaaaatttaatgtcccacattgggtagatcacacactctagtag 2817548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 34142928 - 34142781
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  34142928 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 34142829  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34142828 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 34142781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 34155544 - 34155397
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  34155544 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 34155445  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  34155444 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 34155397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 11185817 - 11185910
Alignment:
Q  1 tcacgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactcttcacta 94  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11185817 tcacgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactcttcacta 11185910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 6727777 - 6727924
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  6727777 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 6727876  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||    
T  6727877 aattgaaaattttatgttccacattgggtagatcacacactctagtag 6727924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 34376611 - 34376464
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  34376611 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 34376512  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||    
T  34376511 aattgaaaattttatgtcccacattgggtagataacacactctagtag 34376464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 24190654 - 24190802
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  24190654 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 24190753  T
Q  264 aattgaaaa-ttttatgtcccacatcgggtagatcacacactctagtag 311  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  24190754 aattgaaaatttttatgtcccacattgggtagatcacacactctagtag 24190802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 22831820 - 22831910
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactcttcacta 94  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  22831820 cgaggcgagagcctctgctcgccgtggcgagttcaggttagaatcccatcagtttaattccaggttcaatctcgtcctatattcttcacta 22831910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 31983622 - 31983475
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||| ||||||||||||||    
T  31983622 ggaacactagtgtatattggcaaaaacttggagtatactagtttttatgaggagacattggaatgtaaacacaatgatgtagaaattagtgtaaagtgtg 31983523  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  31983522 aattgaaaattttatgtcccgcattgggtagatcacacactctagtag 31983475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 18821622 - 18821542
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctaca 84  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||| |||||||    
T  18821622 cgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctaca 18821542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 20360763 - 20360678
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||| ||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  20360763 cgaggcgagagcctcagctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctt 20360678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 20638086 - 20638001
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||| ||| |||| ||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  20638086 cgaggtgagagcctttgctcgccgtggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctt 20638001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 31981904 - 31981832
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  31981904 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatactcttctctggttttctc 31981832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 16920434 - 16920351
Alignment:
Q  6 aggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||  ||||||| ||||    
T  16920434 aggcgagagcctctgctcgccatggcgagttcaggtcagaattccataagtttaattccaggtacaatcttatcctacattctt 16920351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 34376270 - 34376198
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  34376270 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 34376198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 22699738 - 22699784
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22699738 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 22699784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 24191126 - 24191198
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| ||||||||||||    
T  24191126 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctc 24191198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 24192223 - 24192295
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| ||||||||||||    
T  24192223 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctc 24192295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 34142418 - 34142358
Alignment:
Q  334 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  34142418 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 34142358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 334 - 394
Target Start/End: Complemental strand, 34155034 - 34154974
Alignment:
Q  334 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  34155034 gctcgggaattggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 34154974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 322 - 375
Target Start/End: Original strand, 6728193 - 6728246
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaat 375  Q
    ||||||| |||||||||||||| | ||||||||||||||||| |||||||||||    
T  6728193 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaat 6728246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 2817901 - 2817973
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| ||||||||||||||   |||||| ||||||||||  |||||||||| ||||| ||||||||||||    
T  2817901 tataaatagagagctcgggaatgagattctttactccaaaaccaagaatcgaatcctcttctctggttttctc 2817973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 351 - 407
Target Start/End: Original strand, 29491005 - 29491061
Alignment:
Q  351 ttcactccaaaactgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    ||||||||||||||||||||| ||||||||| |||| |||| |||||||||| ||||    
T  29491005 ttcactccaaaactgagaatcaaatactcttctctgattttatctcctctcttctcc 29491061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 19303343 - 19303284
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||| | ||| |||||| ||||    
T  19303343 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattc 19303284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 18409628 - 18409586
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggttagaat 47  Q
    |||||||| |||||||||||||||||||||||||||| |||||    
T  18409628 gaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 18409586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 20594092 - 20594147
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagttta 59  Q
    ||||||||| ||||||||||||||| |||||||||||| ||| | ||| |||||||    
T  20594092 cgaggcgagagcctctgctcgccgtagcgagttcaggtcagatttccaaaagttta 20594147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 22780030 - 22779971
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||| |||| ||||||||||||| |||| ||||||||| |||||| ||||    
T  22780030 cgaggcgagagcctttgcttgccgtggcgagtttaggtcagaatcccacaagtttcattc 22779971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 28496275 - 28496216
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| || || |||||| ||||    
T  28496275 cgaggcgagagcctctgctcgccatggcgagttcaggtcagattctcaaaagtttcattc 28496216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 29808686 - 29808639
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatccca 51  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  29808686 cgaggcgagagcctctgctcgccatggcgagttcaggtcagattccca 29808639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 25611526 - 25611481
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcc 49  Q
    ||||||||| |||||||||| || |||||||||||||| |||||||    
T  25611526 cgaggcgagagcctctgctctccatggcgagttcaggtcagaatcc 25611481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25603191 - 25603143
Alignment:
Q  1 tcacgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcc 49  Q
    |||||||||||| ||||||||||||| ||| ||||||| || |||||||    
T  25603191 tcacgaggcgagagcctctgctcgccatggtgagttcaagtcagaatcc 25603143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 215; Significance: 1e-118; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 164 - 407
Target Start/End: Complemental strand, 17510571 - 17510328
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510571 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 17510472  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510471 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 17510372  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  17510371 tgagaatcgaatactcttctctggttttctctcctctcttctcc 17510328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 164 - 407
Target Start/End: Complemental strand, 42020086 - 42019843
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||    
T  42020086 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactaatgtaaaatgtg 42019987  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42019986 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 42019887  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  42019886 tgagaatcgaatactcttctctggttttctctcctctcttctcc 42019843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 190 - 407
Target Start/End: Complemental strand, 17505440 - 17505223
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  17505440 cttggaatatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaactattgtaaagtgtgaattgaaaattttatgtcccacatcg 17505341  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17505340 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 17505241  T
Q  390 ttctctcctctctgctcc 407  Q
    ||||||||||||| ||||    
T  17505240 ttctctcctctcttctcc 17505223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 164 - 407
Target Start/End: Complemental strand, 42024866 - 42024623
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  42024866 ggaacactagtgtataatgaaaaaaacttgaagtatactagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaaatgtg 42024767  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  42024766 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaat 42024667  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  42024666 tgagaatcgaatactcttctctggttttctctcctctcttctcc 42024623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 190 - 407
Target Start/End: Complemental strand, 43580147 - 43579930
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43580147 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 43580048  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |||| ||    
T  43580047 ggtagatcacatactctagtagaaatcctccttataaattgagagctcgggaatagtatttttcacaccaaaactgagaatcgaatactcttctctgatt 43579948  T
Q  390 ttctctcctctctgctcc 407  Q
    ||||||||||||| ||||    
T  43579947 ttctctcctctcttctcc 43579930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 178; E-Value: 8e-96
Query Start/End: Original strand, 190 - 402
Target Start/End: Complemental strand, 41859071 - 41858861
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  41859071 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggaaaaattagtgtaaagtgtgaattgaaaattctatgtcccacatcg 41858972  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  41858971 ggtagatc--acactctagtagaaattctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 41858874  T
Q  390 ttctctcctctct 402  Q
    |||||| ||||||    
T  41858873 ttctcttctctct 41858861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 190 - 300
Target Start/End: Complemental strand, 41853956 - 41853846
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  41853956 cttggagtatactagggagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattctatgtcccacatcg 41853857  T
Q  290 ggtagatcaca 300  Q
    |||||||||||    
T  41853856 ggtagatcaca 41853846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 1413100 - 1413220
Alignment:
Q  191 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 290  Q
    |||||||||||||||   | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |     
T  1413100 ttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattga 1413199  T
Q  291 gtagatcacacactctagtag 311  Q
    |||||||||||||||||||||    
T  1413200 gtagatcacacactctagtag 1413220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 36254638 - 36254517
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||   | ||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| |    
T  36254638 cttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgttccacattg 36254539  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  36254538 ggtagatcacacactctagtag 36254517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 24770605 - 24770752
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  24770605 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 24770704  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  24770705 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 24770752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 195 - 311
Target Start/End: Complemental strand, 26709804 - 26709688
Alignment:
Q  195 agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtag 294  Q
    |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  26709804 agtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtag 26709705  T
Q  295 atcacacactctagtag 311  Q
    || ||||| | ||||||    
T  26709704 attacacattgtagtag 26709688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 195 - 311
Target Start/End: Complemental strand, 26979538 - 26979422
Alignment:
Q  195 agtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtag 294  Q
    |||||||||||  ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | ||||    
T  26979538 agtatactagttggtttgtggagcctatggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgagtag 26979439  T
Q  295 atcacacactctagtag 311  Q
    || ||||| | ||||||    
T  26979438 attacacattgtagtag 26979422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 24776116 - 24776206
Alignment:
Q  221 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24776116 ttggaatgtaaacacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 24776206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 21292773 - 21292688
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| ||||||| ||||    
T  21292773 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccacaagtttaattccaggttcaatctcatcctacattctt 21292688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 22107176 - 22107091
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||| ||| |||||||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||    
T  22107176 cgaggcgagagcctctgctcgccatggtgagttcaggtcagaatcccacaagtttaatttcaggttcaatctcgtcctacattctt 22107091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 1413806 - 1413878
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  1413806 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctggttttctc 1413878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 8286645 - 8286560
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||| |||| |||| |||| ||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  8286645 cgaggcgagagcctctgctcgccatggctagtttaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctt 8286560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 17508676 - 17508630
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17508676 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 17508630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 41857195 - 41857149
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  41857195 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 41857149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 42023588 - 42023542
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42023588 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 42023542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 22075337 - 22075422
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||||||||||||||||||||| |||| | || |||||| |||||||||||| | || ||||||| ||||    
T  22075337 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcattttcatcctacattctt 22075422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 24776563 - 24776635
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||| ||| | |||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  24776563 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctggttttctc 24776635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 13095813 - 13095872
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||| |||||| ||||    
T  13095813 cgaggcgagggcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattc 13095872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 24772849 - 24772895
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  24772849 catcactaagaatggtatttttgttgggaaaaggtacgccactgatg 24772895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 26709444 - 26709372
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| | | |||||||||||||||||||||||| |||| ||||| | ||||||||||    
T  26709444 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttctttggttttctc 26709372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 26979178 - 26979106
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| | | |||||||||||||||||||||||| |||| ||||| | ||||||||||    
T  26979178 tataaatagagagctcgggatttgcattcttcactccaaaactgagaattgaatcctcttctttggttttctc 26979106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 36254177 - 36254105
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| ||||||| |||||| | ||||||||||||||||| ||||||||||| ||||| ||| ||||||||    
T  36254177 tataaatagagagcttgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctagttttctc 36254105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 13025629 - 13025688
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||||||| |||||| ||||    
T  13025629 cgaggcgagggcctttgctcgctgtggcgagttcaggtcagaatcccacaagtttcattc 13025688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 21985949 - 21985890
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||| |||||| ||||    
T  21985949 cgaggcgagggcctctgcttgccgtggcgagttcaggtcagaattccaaaagtttcattc 21985890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 24493884 - 24493946
Alignment:
Q  1 tcacgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    |||||||||||  |||||||||||||||||||||||||||| ||||||| | |||||| ||||    
T  24493884 tcacgaggcgaaagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattc 24493946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 9078271 - 9078314
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaat 47  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  9078271 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 9078314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 24529539 - 24529598
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||| | ||||| ||| |||||| ||||    
T  24529539 cgaggcgagagcctctgctcgccgtggcgagttcagatcagaattccaaaagtttcattc 24529598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21565860 - 21565900
Alignment:
Q  1 tcacgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||| ||||||||||||| ||||||||||||||    
T  21565860 tcacgaggcgagagcctctgctcgccatggcgagttcaggt 21565900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 24771108 - 24771180
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||| ||| | |||||||| ||||||||||  |||||| || |||||| ||||||||||||    
T  24771108 tataaatagagagctcaggattggtattctttactccaaaaccaagaatcaaacactcttctctggttttctc 24771180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 23390298 - 23390240
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    |||||||  |||||| |||||| |||||||||||||| ||||||||| |||||| ||||    
T  23390298 gaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattc 23390240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 1096786 - 1096823
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  1096786 cgaggcgagagcctctactcgccgtggcgagttcaggt 1096823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 11581047 - 11581010
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  11581047 cgaggcgagagcctctgctcgccatggcgagttcaggt 11581010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21741348 - 21741308
Alignment:
Q  1 tcacgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||| |||||| |||||| ||||||||||||||    
T  21741348 tcacgaggcgagagcctctactcgccatggcgagttcaggt 21741308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 164 - 407
Target Start/End: Original strand, 8984987 - 8985230
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8984987 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8985086  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985087 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 8985186  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  8985187 tgagaatcgaatactcttctctggttttctctcctctcttctcc 8985230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 164 - 407
Target Start/End: Complemental strand, 13701023 - 13700780
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13701023 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 13700924  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700923 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 13700824  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  13700823 tgagaatcgaatactcttctctggttttctctcctctcttctcc 13700780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 164 - 407
Target Start/End: Original strand, 21304535 - 21304778
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304535 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21304634  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304635 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 21304734  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  21304735 tgagaatcgaatactcttctctggttttctctcctctcttctcc 21304778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 164 - 407
Target Start/End: Original strand, 8979867 - 8980110
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8979867 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8979966  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8979967 aattgaaaattttatgtcccatatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgagaatagtattcttcactccaaaac 8980066  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  8980067 tgagaatcgaatactcttctctggttttctctcctctcttctcc 8980110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 164 - 407
Target Start/End: Original strand, 21299415 - 21299658
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21299415 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtg 21299514  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21299515 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactccaaaac 21299614  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  21299615 tgagaatcgaatactcttctctggttttctctcctctcttctcc 21299658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 164 - 407
Target Start/End: Complemental strand, 54991989 - 54991746
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54991989 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 54991890  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  54991889 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaatcctccttataaattgaaagctcgggaatagtattcttcacttcaaaac 54991790  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  54991789 tgagaatcgaatactcttctctggttttctctcctctcttctcc 54991746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 39999609 - 39999405
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39999609 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 39999510  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39999509 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 39999410  T
Q  390 ttctc 394  Q
    |||||    
T  39999409 ttctc 39999405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 40004567 - 40004363
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40004567 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 40004468  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40004467 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 40004368  T
Q  390 ttctc 394  Q
    |||||    
T  40004367 ttctc 40004363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 54343743 - 54343539
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54343743 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 54343644  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54343643 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 54343544  T
Q  390 ttctc 394  Q
    |||||    
T  54343543 ttctc 54343539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 54348897 - 54348693
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54348897 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 54348798  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  54348797 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 54348698  T
Q  390 ttctc 394  Q
    |||||    
T  54348697 ttctc 54348693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 164 - 407
Target Start/End: Original strand, 54990392 - 54990635
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    ||||||||| |||||||||       |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  54990392 ggaacactaatgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaagtgtg 54990491  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  54990492 aattgaaaattttatgtcccacatcggatagatcacacactctagtagaaattctccttataaattgagagctcgggtatagtattcttcactccaaaac 54990591  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||| ||||||||| ||| |||||||||||||||| ||||    
T  54990592 tgagaatcaaatactcttctcttgttttctctcctctctactcc 54990635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 36359868 - 36359664
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36359868 cttggagtatactagtgagtttgtggagcctttgaaatgttaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36359769  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36359768 ggtagatcacacactctagtagaaattctccttataaattgagagctcaggaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 36359669  T
Q  390 ttctc 394  Q
    |||||    
T  36359668 ttctc 36359664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 36354682 - 36354478
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36354682 cttggagtatactagtgaatttgtggagcctttggaatgttaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36354583  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36354582 ggtagatcacacactctagtagaaatcctctttataaattgagagctcagaaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 36354483  T
Q  390 ttctc 394  Q
    |||||    
T  36354482 ttctc 36354478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 53798450 - 53798329
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |    
T  53798450 cttggagtatactagttggtttgtggagcctttggaatgtaaacacaagaatggagaaactagtgtaaagtgtgaattgaaaattttatgtcctacattg 53798351  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  53798350 ggtagatcacacactctagtag 53798329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 41394005 - 41393858
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41394005 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtgaagcctttggaatgtaaacacaaggatggaaaaactagtgtaaagtgtg 41393906  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  41393905 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 41393858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 51018732 - 51018853
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||||| |||||||||   | ||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  51018732 cttggaatatactagttgttatgtggagactttggaatgtacacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 51018831  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  51018832 ggtagatcacacactctagtag 51018853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 9763273 - 9763420
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| |||||||||||||||||||||||| ||||||||||||||||  ||    
T  9763273 ggaacactagtgtatattggcataaacttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagcatg 9763372  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  9763373 aattgaaaattttatgtcccacattgagtagatcacacactctagtag 9763420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 13695904 - 13695757
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  13695904 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13695805  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13695804 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13695757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 13711517 - 13711370
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  13711517 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13711418  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13711417 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13711370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 4207188 - 4207042
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||| ||||| |||| ||||||||||||||||||||    
T  4207188 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaa-cacaatgatgtagaaactagtgtaaagtgtg 4207090  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4207089 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 4207042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 191 - 311
Target Start/End: Original strand, 47045647 - 47045767
Alignment:
Q  191 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 290  Q
    |||||||||||||||   | || |||| | || |||||||||||||| ||   |||||||||||||||||||||||||||||||||||||||||||| ||    
T  47045647 ttggagtatactagttgttatgaggagacattagaatgtaaacacaatgaaatagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgg 47045746  T
Q  291 gtagatcacacactctagtag 311  Q
     ||||||||||||||||||||    
T  47045747 atagatcacacactctagtag 47045767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 7089195 - 7089280
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  7089195 cgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccataagtttcattccaggttcaatctcatcctacattctt 7089280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 3096961 - 3097046
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  3096961 cgaggcgagagcctctgctcgccttggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctt 3097046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 12903075 - 12903160
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||| | |||||| ||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  12903075 cgaggcgggagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctt 12903160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 13695503 - 13695431
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  13695503 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatactcttctctggttttctc 13695431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 6 - 89
Target Start/End: Complemental strand, 14053103 - 14053020
Alignment:
Q  6 aggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||| ||||||||||||| ||| |||||||||| ||||||||| ||||||||||||| |||||||||| ||||||| ||||    
T  14053103 aggcgagagcctctgctcgccatggtgagttcaggtcagaatcccacaagtttaattccaagttcaatctcatcctacattctt 14053020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 9763771 - 9763843
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| | ||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  9763771 tataaatagagagctcgggattggtattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 9763843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 17047875 - 17047796
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctaca 84  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||| |||||| |||||||||| |||||||    
T  17047875 cgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattcca-gttcaatctcatcctaca 17047796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 41393584 - 41393512
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  41393584 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 41393512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 53797970 - 53797898
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  53797970 tataaatagagagctcgggattagcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 53797898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 13699113 - 13699067
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  13699113 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 13699067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 21301325 - 21301371
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21301325 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 21301371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 36357916 - 36357870
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  36357916 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 36357870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 40002844 - 40002798
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  40002844 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 40002798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 394
Target Start/End: Original strand, 51019117 - 51019199
Alignment:
Q  312 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||||  ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  51019117 aaatcctctctataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 51019199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 54346978 - 54346932
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  54346978 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 54346932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 13711010 - 13710938
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| ||||||||||||    
T  13711010 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctc 13710938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 47046060 - 47046132
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| |||||||||||  |||| ||||||||||||    
T  47046060 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcatcttctctggttttctc 47046132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 8981777 - 8981823
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  8981777 catcactaagaatggtatttttgttgggaaagggtacgccattgatg 8981823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 13702991 - 13702945
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||    
T  13702991 catcactaagaatggtacttttgttgggaaagggtacgccactgatg 13702945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 58
Target Start/End: Original strand, 7894020 - 7894073
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagttt 58  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||| ||||||    
T  7894020 gaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagttt 7894073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 44053147 - 44053201
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagttt 58  Q
    ||||||||| | |||||||||||||||||||||||||| ||||||||| ||||||    
T  44053147 cgaggcgagagtctctgctcgccgtggcgagttcaggtcagaatcccacaagttt 44053201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 16377323 - 16377271
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtt 57  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||||| |||||    
T  16377323 gaggcgagagcctctgctcgccgtggcgagttcaggtcagattcccaaaagtt 16377271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 7799015 - 7799058
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaat 47  Q
    ||||||||| |||||||||||||||||||||||||||| |||||    
T  7799015 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaat 7799058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 15091215 - 15091274
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||| | ||| |||||| ||||    
T  15091215 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattc 15091274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 22636753 - 22636811
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    |||||||| ||||||||||||||||||||| ||| || ||||||||| |||||| ||||    
T  22636753 gaggcgagagcctctgctcgccgtggcgaggtcaagtcagaatcccacaagtttcattc 22636811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 23374162 - 23374125
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  23374162 cgaggcgagagcctctgctcgccgtggcgagttcaggt 23374125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 14038967 - 14039026
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||| ||| ||| | ||| |||||| ||||    
T  14038967 cgaggcgagagcctctgctcgccgtggcgagttctggtcagatttccaaaagtttcattc 14039026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 12774318 - 12774356
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggtt 42  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  12774318 cgaggcgagagcctctgctcgccatggcgagttcaggtt 12774356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 39706089 - 39706052
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  39706089 cgaggcgagggcctctactcgccatggcgagttcaggt 39706052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 44102529 - 44102566
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  44102529 cgaggcgagagcctctgctcgccatggcgagttcaggt 44102566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 164 - 407
Target Start/End: Complemental strand, 27711836 - 27711593
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711836 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 27711737  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27711736 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 27711637  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  27711636 tgagaatcgaatactcttctctggttttctctcctctcttctcc 27711593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 190 - 407
Target Start/End: Original strand, 37404026 - 37404243
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404026 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 37404125  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37404126 ggtagatcacacactctagtagaaatcctccttataaattgagagcccgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 37404225  T
Q  390 ttctctcctctctgctcc 407  Q
    ||||||||||||| ||||    
T  37404226 ttctctcctctcttctcc 37404243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 190 - 407
Target Start/End: Original strand, 37409145 - 37409362
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37409145 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 37409244  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  37409245 ggtagatcacacactctagtataaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 37409344  T
Q  390 ttctctcctctctgctcc 407  Q
    ||||||||||||| ||||    
T  37409345 ttctctcctctcttctcc 37409362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 190 - 393
Target Start/End: Original strand, 34317840 - 34318043
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34317840 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 34317939  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  34317940 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 34318039  T
Q  390 ttct 393  Q
    ||||    
T  34318040 ttct 34318043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 190 - 407
Target Start/End: Complemental strand, 27716930 - 27716713
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27716930 cttggagtatactagtgagtttgtggagcctttggaacgtaagcacaaggatggagaaactagtgtaaagtgtgaattgaaatttttatgtcccacatcg 27716831  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  27716830 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgataatcgaatactcttatctggtt 27716731  T
Q  390 ttctctcctctctgctcc 407  Q
    ||||||||||||| ||||    
T  27716730 ttctctcctctcttctcc 27716713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 190 - 394
Target Start/End: Original strand, 36684270 - 36684474
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36684270 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 36684369  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  36684370 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttgactccaaaactgagaatcgaatactcttctctggtt 36684469  T
Q  390 ttctc 394  Q
    |||||    
T  36684470 ttctc 36684474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 190 - 407
Target Start/End: Original strand, 11250731 - 11250948
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11250731 cttggagtataccagtgagtttgtggagtctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 11250830  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||    
T  11250831 gttagatcacacactctagtagaaatcctccttataaattgagagctcgtgaatagtattctttactccaaaattgagaatcgaatactcttctctggtt 11250930  T
Q  390 ttctctcctctctgctcc 407  Q
    ||||||||||||| ||||    
T  11250931 ttctctcctctcttctcc 11250948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 5725512 - 5725365
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725512 ggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 5725413  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  5725412 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 5725365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 3585448 - 3585301
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  3585448 ggaacactagtgtatattggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaaatgtg 3585349  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  3585348 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 3585301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 165 - 311
Target Start/End: Complemental strand, 5730917 - 5730771
Alignment:
Q  165 gaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtga 264  Q
    ||||||||||||||||||        |||||||||||||||  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  5730917 gaacactagtgtataatggaaaaaatttggagtatactagttggtttgtgaaacctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtga 5730818  T
Q  265 attgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  5730817 attgaaaattttatgtcccacattgggtagatcacacactctagtag 5730771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 48245998 - 48246119
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||   | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| |    
T  48245998 cttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattaaaatttttatgtcccacattg 48246097  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  48246098 ggtagatcacacactctagtag 48246119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 190 - 249
Target Start/End: Original strand, 50959010 - 50959069
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaac 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  50959010 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaagaatggagaaac 50959069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 38801194 - 38801109
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| | ||||||| ||||    
T  38801194 cgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagttcaattccaggttcaatcacatcctacattctt 38801109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 22355967 - 22355892
Alignment:
Q  14 gcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    |||||||||||||||||||||||||||| ||||||||| || ||| ||||||||||||||||| ||||||| ||||    
T  22355967 gcctctgctcgccgtggcgagttcaggtcagaatcccacaaatttcattccaggttcaatctcatcctacattctt 22355892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 89
Target Start/End: Complemental strand, 22357653 - 22357578
Alignment:
Q  14 gcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    |||||||||||||||||||||||||||| ||||||||| || ||| ||||||||||||||||| ||||||| ||||    
T  22357653 gcctctgctcgccgtggcgagttcaggtcagaatcccacaaatttcattccaggttcaatctcatcctacattctt 22357578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 21026998 - 21027083
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||||||||||||| |||| |||| | || |||||| ||||||||||||||||| ||||||| ||||    
T  21026998 cgaggcgagagcctctgctcgccgtggcgagtttaggtcagaacctcacaagtttcattccaggttcaatctcatcctacattctt 21027083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 27250532 - 27250447
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||||| | |||| ||||||||||||||| | ||||||| ||||    
T  27250532 cgaggcgagagcctctgctcgacgtggcgagttcaggtcagaatcccacaggtttcattccaggttcaatcccatcctacattctt 27250447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 27715046 - 27715000
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  27715046 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 27715000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 20847022 - 20846937
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    |||||| || |||||||||||||||||||||||||||| | || | || |||||| ||||||||||||||||| ||||||| ||||    
T  20847022 cgaggcaagagcctctgctcgccgtggcgagttcaggtcaaaacctcacaagtttcattccaggttcaatctcatcctacattctt 20846937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 5730446 - 5730374
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  5730446 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 5730374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 3584942 - 3584870
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||| ||| | | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  3584942 tataaatagagagctcaggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 3584870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 22354375 - 22354316
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||| ||||    
T  22354375 cgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattc 22354316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 50210015 - 50209956
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||| ||||    
T  50210015 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtttcattc 50209956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 37405908 - 37405954
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  37405908 catcactaagaatgataattttgttgggaaagggtacgccactgatg 37405954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 394
Target Start/End: Original strand, 48246427 - 48246509
Alignment:
Q  312 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||||  ||||||| |||| ||||| ||| | |||||||||| |||||| ||||||||||| ||||| ||||||||||||    
T  48246427 aaatcctctctataaatagagacctcggaaatgggattcttcactacaaaaccgagaatcgaatcctcttctctggttttctc 48246509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 5728721 - 5728674
Alignment:
Q  114 catcactaagaatggtattttt-gttgggaaagggtacgccactgatg 160  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||    
T  5728721 catcactaagaatgatattttttgttgggaaagggtacgccactgatg 5728674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 34510100 - 34510136
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||| ||||||||||||||||||||||||||||    
T  34510100 gaggcgagagcctctgctcgccgtggcgagttcaggt 34510136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 433326 - 433373
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatccca 51  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  433326 cgaggcgagagcctctgctcgccatggcgagttcaggtcagattccca 433373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 21754355 - 21754393
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggtt 42  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  21754355 cgaggcgagagcctctgctcgccatggcgagttcaggtt 21754393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 33681328 - 33681365
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  33681328 cgaggcgagagcctctgctcgccatggcgagttcaggt 33681365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 52927783 - 52927746
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  52927783 cgaggcgagggcctctactcgccatggcgagttcaggt 52927746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 210; Significance: 1e-115; HSPs: 2)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 190 - 407
Target Start/End: Complemental strand, 4050 - 3833
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4050 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 3951  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3950 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 3851  T
Q  390 ttctctcctctctgctcc 407  Q
    ||||||||||||| ||||    
T  3850 ttctctcctctcttctcc 3833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 2166 - 2120
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2166 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 2120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 206; Significance: 1e-112; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 164 - 394
Target Start/End: Complemental strand, 33238568 - 33238338
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238568 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 33238469  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33238468 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 33238369  T
Q  364 tgagaatcgaatactcttatctggttttctc 394  Q
    |||||||||||||||||| ||||||||||||    
T  33238368 tgagaatcgaatactcttctctggttttctc 33238338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 164 - 394
Target Start/End: Complemental strand, 33243745 - 33243515
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33243745 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacacaaggatggagaaactagtgtaaagtgtg 33243646  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33243645 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 33243546  T
Q  364 tgagaatcgaatactcttatctggttttctc 394  Q
    |||||||||||||||||| ||||||||||||    
T  33243545 tgagaatcgaatactcttctctggttttctc 33243515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 47994340 - 47994136
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47994340 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 47994241  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47994240 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 47994141  T
Q  390 ttctc 394  Q
    |||||    
T  47994140 ttctc 47994136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 47999515 - 47999311
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47999515 cttggagtatattagtgagtttgtggagcctttggaatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtctcacatcg 47999416  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47999415 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 47999316  T
Q  390 ttctc 394  Q
    |||||    
T  47999315 ttctc 47999311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 21080321 - 21080468
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21080321 ggaacactagtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 21080420  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||    
T  21080421 aattgaaaattttatgtcccacgttgggtagatcacacactctagtag 21080468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 2233978 - 2234099
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  2233978 cttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 2234077  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  2234078 ggtagatcacacactctagtag 2234099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 32211965 - 32212112
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||| ||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32211965 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgttgagactttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 32212064  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||    
T  32212065 aattgaaaattttatgtctcacattgggtagatcacacactctagtag 32212112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 42572747 - 42572600
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  42572747 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 42572648  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  42572647 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 42572600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 17496221 - 17496100
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  17496221 cttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 17496122  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  17496121 ggtagatcacacactctagtag 17496100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 17556993 - 17557114
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  17556993 cttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 17557092  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  17557093 ggtagatcacacactctagtag 17557114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 12935231 - 12935084
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  12935231 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 12935132  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||    
T  12935131 aattgaaaattttatgtcccacattgggtagatcacacactttagtag 12935084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 19308876 - 19309023
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| ||||| |||||||||||||||||| ||||||||||||||||||||    
T  19308876 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagactttgaaatgtaaacacaaggatgtagaaactagtgtaaagtgtg 19308975  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  19308976 aattgaaaattttatgtcccacattggatagatcacacactctagtag 19309023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 47176496 - 47176643
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  47176496 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 47176595  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  47176596 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 47176643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 304
Target Start/End: Original strand, 16538699 - 16538813
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||   | ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  16538699 cttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattg 16538798  T
Q  290 ggtagatcacacact 304  Q
     ||||||||||||||    
T  16538799 agtagatcacacact 16538813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 190 - 304
Target Start/End: Complemental strand, 16626963 - 16626849
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||   | ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  16626963 cttggagtatactagttgttatgtggagactttggaatgtagacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccatattg 16626864  T
Q  290 ggtagatcacacact 304  Q
     ||||||||||||||    
T  16626863 agtagatcacacact 16626849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 311
Target Start/End: Complemental strand, 43893689 - 43893542
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||| ||||||||||    
T  43893689 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagcgtaaagtgtg 43893590  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  43893589 aattgaaaattttatgtccctcattgggtagatcacacactctagtag 43893542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 16386050 - 16385965
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  16386050 cgaggcgagagccactgctcgccgtggcgagttcaggttagaatcccacaagtttaattccaggttcaatctcatcctacattctt 16385965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 27847636 - 27847558
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtccta 82  Q
    ||||||||| ||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||    
T  27847636 cgaggcgagagcctctgcttgccgtggcgagttcaggtcaaaatcccataagtttaattccaggttcaatctcatccta 27847558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 4 - 82
Target Start/End: Original strand, 40443707 - 40443784
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtccta 82  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| |||||    
T  40443707 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaag-ttaattccaggttcaatctcatccta 40443784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 243
Target Start/End: Original strand, 47544749 - 47544828
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatgg 243  Q
    |||||||||||||||||||       ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  47544749 ggaacactagtgtataatgaaaaaaacttggagtatactagagagtttgtggagcctttggaatgtaaacacaaggatgg 47544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 2234384 - 2234456
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  2234384 tataaatagagagctcgggattagtattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 2234456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 26212314 - 26212399
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||| ||||||||||||||||||||| |||| | || |||||| ||||||||||||||||| ||||||| ||||    
T  26212314 cgaggcgagagcctctactcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcaatctcatcctacattctt 26212399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 12934738 - 12934666
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  12934738 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 12934666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 33241778 - 33241732
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  33241778 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 33241732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 47997575 - 47997529
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  47997575 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 47997529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 19309365 - 19309437
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||| ||| ||||| ||||||||||||    
T  19309365 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcaaatcctcttctctggttttctc 19309437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 21080793 - 21080865
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| | | |||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  21080793 tataaatagagagctcgggatttgcattcttcacttcaaaactgagaatcgaatcctcttctctggttttctc 21080865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 42572286 - 42572214
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  42572286 tataaatagagaactcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 42572214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 43893210 - 43893138
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||  ||||||||||| ||||| ||||||||||||    
T  43893210 tataaatagagagctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctctggttttctc 43893138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 16539166 - 16539238
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||  ||| ||||| ||||||||||||    
T  16539166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctggttttctc 16539238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 16626496 - 16626424
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||  ||| ||||| ||||||||||||    
T  16626496 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaattaaatcctcttctctggttttctc 16626424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 17495744 - 17495672
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | |||||| |||||||||| |||||| |||| ||||| ||||||||||||    
T  17495744 tataaatagagagctcgggaatgggattctttactccaaaaccgagaattgaatcctcttctctggttttctc 17495672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 17557470 - 17557542
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | |||||| |||||||||| |||||| |||| ||||| ||||||||||||    
T  17557470 tataaatagagagctcgggaatgggattctttactccaaaaccgagaattgaatcctcttctctggttttctc 17557542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 47176904 - 47176976
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| ||||||||||||||   ||||||||||||||||| || |||||||| ||||| ||||||||||||    
T  47176904 tataaatagagagctcgggaatgagattcttcactccaaaaccgataatcgaatcctcttctctggttttctc 47176976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 9509507 - 9509566
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||| ||||    
T  9509507 cgaggcgagagcctctcctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 9509566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 38227799 - 38227858
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||| | |||||| ||||    
T  38227799 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatccaaaaagtttcattc 38227858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 12699147 - 12699197
Alignment:
Q  1 tcacgaggcgagggcctctgctcgccgtggcgagttcaggttagaatccca 51  Q
    |||||||| ||| |||||||||||||||||||||||||||| |||||||||    
T  12699147 tcacgaggtgagagcctctgctcgccgtggcgagttcaggtcagaatccca 12699197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 394
Target Start/End: Original strand, 32212419 - 32212479
Alignment:
Q  334 gctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    |||||||||| | ||||||||||||||||| ||||||||||| ||||| |||| |||||||    
T  32212419 gctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctgattttctc 32212479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 44116824 - 44116871
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatccca 51  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  44116824 cgaggcgagagcctctgctcgccatggcgagttcaggtcagattccca 44116871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 15143839 - 15143786
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtt 57  Q
    ||||||||| ||||||||||||| |||||||| ||||| |||||| || |||||    
T  15143839 cgaggcgagagcctctgctcgccatggcgagtacaggtcagaatcacaaaagtt 15143786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 22073235 - 22073272
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  22073235 cgaggcgagggcctctactcgccatggcgagttcaggt 22073272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 190 - 407
Target Start/End: Complemental strand, 55129276 - 55129060
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55129276 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaag-atggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 55129178  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  55129177 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 55129078  T
Q  390 ttctctcctctctgctcc 407  Q
    ||||||||||||| ||||    
T  55129077 ttctctcctctcttctcc 55129060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 197 - 407
Target Start/End: Complemental strand, 17369199 - 17368989
Alignment:
Q  197 tatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagat 296  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17369199 tatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagat 17369100  T
Q  297 cacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctctc 396  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  17369099 cacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggttttctctc 17369000  T
Q  397 ctctctgctcc 407  Q
    |||||| ||||    
T  17368999 ctctcttctcc 17368989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 164 - 394
Target Start/End: Original strand, 20090191 - 20090421
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  20090191 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaagtgtg 20090290  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20090291 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 20090390  T
Q  364 tgagaatcgaatactcttatctggttttctc 394  Q
    |||||||||||||||||| ||||||||||||    
T  20090391 tgagaatcgaatactcttctctggttttctc 20090421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 164 - 394
Target Start/End: Original strand, 20095316 - 20095546
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  20095316 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggcatgtaaacatcaggatggagaaactagtgtaaagtgtg 20095415  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20095416 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 20095515  T
Q  364 tgagaatcgaatactcttatctggttttctc 394  Q
    |||||||||||||||||| ||||||||||||    
T  20095516 tgagaatcgaatactcttctctggttttctc 20095546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 190 - 394
Target Start/End: Original strand, 15762585 - 15762789
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15762585 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 15762684  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15762685 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 15762784  T
Q  390 ttctc 394  Q
    |||||    
T  15762785 ttctc 15762789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 190 - 394
Target Start/End: Original strand, 15767746 - 15767950
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15767746 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 15767845  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15767846 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 15767945  T
Q  390 ttctc 394  Q
    |||||    
T  15767946 ttctc 15767950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 3481649 - 3481796
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3481649 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 3481748  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  3481749 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 3481796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 34128437 - 34128558
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  34128437 cttggagtatactagttgatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 34128536  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  34128537 ggtagatcacacactctagtag 34128558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 17358686 - 17358566
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  17358686 cttggattatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaa-tagtgtaaagtgtgaattgaaaattttatgtcccacattg 17358588  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  17358587 ggtagatcacacactctagtag 17358566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 190 - 311
Target Start/End: Original strand, 30338126 - 30338247
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  30338126 cttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacattg 30338225  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  30338226 ggtagatcacacactctagtag 30338247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 30341204 - 30341351
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30341204 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 30341303  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||| |||||||  ||||||||||||||||||||||    
T  30341304 aattgaaaattttatggcccacattaggtagatcacacactctagtag 30341351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 54271433 - 54271312
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||| |||||||||||   | ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |    
T  54271433 cttgaagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtctaaagtgtgaattgaaaattttatgtcccacattg 54271334  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  54271333 ggtagatcacacactctagtag 54271312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 3476249 - 3476339
Alignment:
Q  221 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3476249 ttggaatgtaaacacaatgatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 3476339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 4117007 - 4117097
Alignment:
Q  221 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4117007 ttggaatgtaaacacaatgatgaagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 4117097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 20698239 - 20698154
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  20698239 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctt 20698154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 3482166 - 3482238
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  3482166 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttatctggttttctc 3482238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 17358179 - 17358107
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| | | ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  17358179 tataaatagagagctcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctggttttctc 17358107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 54270986 - 54270914
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  54270986 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 54270914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 3478439 - 3478485
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3478439 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 3478485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 15764511 - 15764557
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15764511 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 15764557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 17362680 - 17362634
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17362680 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 17362634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 17367322 - 17367276
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  17367322 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 17367276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 20092142 - 20092188
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  20092142 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 20092188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 4117345 - 4117417
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| | ||||||||||    
T  4117345 tataaatagagagctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctc 4117417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 16809731 - 16809803
Alignment:
Q  17 tctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    |||||||||| |||||||||||||| ||||||||| |||||| |||||||| |||||||| ||||||| ||||    
T  16809731 tctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggatcaatctcatcctacattctt 16809803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 30338506 - 30338578
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  30338506 tataaatagagagctcgggatttggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 30338578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 34128923 - 34128995
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| ||||| |||||| | | ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  34128923 tataaatagagaggtcgggatttgcattcttcactccaaaactgagaatcgaatcctcttctctggttttctc 34128995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 26687205 - 26687264
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  26687205 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 26687264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 40213523 - 40213470
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtt 57  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||| |||||    
T  40213523 cgaggcgagagcctctgctcgccgtggcgagttcaggttagattcccaaaagtt 40213470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 3476699 - 3476771
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||   |||||||||| ||||| ||||||||||||    
T  3476699 tataaatagagagctcgggaatgggattcttcactccaaaaacaagaatcgaatcctcttctctggttttctc 3476771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 13442592 - 13442651
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||| ||||||||| ||||||||| |||||| ||||    
T  13442592 cgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatcccacaagtttcattc 13442651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 14973173 - 14973226
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtt 57  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||    
T  14973173 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagtt 14973226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 10321784 - 10321712
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| | | ||||||||||||||||| |||||| |||| ||||| || |||||||||    
T  10321784 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaattgaatcctcttctcaggttttctc 10321712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 72
Target Start/End: Original strand, 12399525 - 12399592
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaa 72  Q
    |||||||| |||| | ||||||||||||||||||||| |||| | || |||||| |||||||||||||    
T  12399525 gaggcgagagcctttactcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcaa 12399592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 17488175 - 17488234
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||||| | |||||| ||||    
T  17488175 cgaggcgagagcctctgctcgccgtggcgatttcaggtcagaatcctacaagtttcattc 17488234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 43841250 - 43841309
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    |||||||||||||| ||||||| ||||||||||||||| ||||| ||| |||||| ||||    
T  43841250 cgaggcgagggcctttgctcgctgtggcgagttcaggtcagaattccacaagtttcattc 43841309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15471241 - 15471281
Alignment:
Q  1 tcacgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  15471241 tcacgaggcgagggcctctactcgccatggcgagttcaggt 15471281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 17248088 - 17248041
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatccca 51  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  17248088 cgaggcgagagcctctgctcgccatggcgagttcaggtcagattccca 17248041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 18438853 - 18438912
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||| | ||||||| ||||| ||| |||||| ||||    
T  18438853 cgaggcgagagcctctgctcgccgtggcaacttcaggtcagaattccaaaagtttcattc 18438912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 30341720 - 30341771
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcga 373  Q
    ||||||| |||||||||||| | | ||||||||||||||||| |||||||||    
T  30341720 tataaatagagagctcgggattgggattcttcactccaaaaccgagaatcga 30341771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 1644484 - 1644446
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggtt 42  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  1644484 cgaggcgagagcctctgctcgccatggcgagttcaggtt 1644446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 30030157 - 30030242
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccata-agtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||| ||||||||| |||| ||||| ||| |  |||| ||||||||||||||||| ||| ||| ||||    
T  30030157 cgaggcgagagcctctgctcgccatggcgagtt-aggtcagaattccaaactgtttcattccaggttcaatctcatcccacattctt 30030242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 32307988 - 32308026
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggtt 42  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  32307988 cgaggcgagagcctctgctcgccatggcgagttcaggtt 32308026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 49667885 - 49667847
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggtt 42  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  49667885 cgaggcgagagcctctgctcgccatggcgagttcaggtt 49667847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 347 - 392
Target Start/End: Complemental strand, 10321861 - 10321816
Alignment:
Q  347 attcttcactccaaaactgagaatcgaatactcttatctggttttc 392  Q
    ||||||||| ||||||| ||||||||||| ||||| ||||||||||    
T  10321861 attcttcaccccaaaaccgagaatcgaatcctcttctctggttttc 10321816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 11424565 - 11424528
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  11424565 cgaggcgagagcctctactcgccgtggcgagttcaggt 11424528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 14234810 - 14234847
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  14234810 cgaggcgagggcctctactcgccatggcgagttcaggt 14234847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 201; Significance: 1e-109; HSPs: 3)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 32085 - 31881
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32085 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 31986  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  31985 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaaaactgagaatcgaatactcttatctggtt 31886  T
Q  390 ttctc 394  Q
    |||||    
T  31885 ttctc 31881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 26913 - 26709
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26913 cttggagtatactagtgagtttgtggagcctttggaatgtaaacaaaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 26814  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26813 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcacaccaaaactgagaatcgaatactcttatctggtt 26714  T
Q  390 ttctc 394  Q
    |||||    
T  26713 ttctc 26709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 30148 - 30102
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  30148 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 30102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 164 - 407
Target Start/End: Complemental strand, 40392832 - 40392589
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  40392832 ggaacactagtgtataatgaaaaaaacttggagtatactagtgagtttgtggagcctttgcaatgtaaacataaggatggagaaactagtgtaaagtgtg 40392733  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 363  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40392732 aattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaac 40392633  T
Q  364 tgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
    ||||||||||||||| || |||| ||||||||||||||| ||||    
T  40392632 tgagaatcgaatacttttctctgattttctctcctctcttctcc 40392589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 190 - 394
Target Start/End: Original strand, 42728175 - 42728379
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42728175 cttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 42728274  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  42728275 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 42728374  T
Q  390 ttctc 394  Q
    |||||    
T  42728375 ttctc 42728379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 191 - 394
Target Start/End: Original strand, 42723007 - 42723210
Alignment:
Q  191 ttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 290  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42723007 ttggagtttactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgg 42723106  T
Q  291 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttt 390  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  42723107 gtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggttt 42723206  T
Q  391 tctc 394  Q
    ||||    
T  42723207 tctc 42723210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 44096842 - 44096638
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44096842 cttggagtatactagtgagtttgtggagcatttggaatgtaaacaaaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44096743  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  44096742 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattctttactccaaaactgagaatcgaatactcttctctggtt 44096643  T
Q  390 ttctc 394  Q
    |||||    
T  44096642 ttctc 44096638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 190 - 381
Target Start/End: Original strand, 44754161 - 44754352
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44754161 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44754260  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44754261 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 44754352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 190 - 381
Target Start/End: Original strand, 44759327 - 44759518
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44759327 cttggagtatactagtgagtttgtggagcctttggcatgtaaacataaggatggagaaattagtgtaaagtgtgaattgaaaattttatgtcccacatcg 44759426  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 381  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44759427 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 44759518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 190 - 407
Target Start/End: Original strand, 40518075 - 40518297
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatc- 288  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  40518075 cttggagtataatagtgagtttgtggagcctttggaatataaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 40518174  T
Q  289 gggtagatcacacactctagtagaaatcctcctt----ataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatc 384  Q
    ||||||||||||||||||||||||||||||||||    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  40518175 gggtagatcacacactctagtagaaatcctccttattaataaattgagagctcgtgaatagtattcttcactccaaaactgagaatcgaatactcttctc 40518274  T
Q  385 tggttttctctcctctctgctcc 407  Q
    | |||||||||||||||| ||||    
T  40518275 ttgttttctctcctctcttctcc 40518297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 193 - 381
Target Start/End: Complemental strand, 40520122 - 40519929
Alignment:
Q  193 ggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatc-ggg 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  40520122 ggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggg 40520023  T
Q  292 tagatcacacactctagtagaaatcctcctt----ataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 381  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40520022 tagatcacacactctagtagaaatcctccttatgaataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactctt 40519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 4162895 - 4163042
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||| ||||||||||       ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4162895 ggaacactggtgtataatggaaaaaacttggagtatactagttggtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 4162994  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  4162995 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 4163042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 28751021 - 28751168
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28751021 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 28751120  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  28751121 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 28751168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 4 - 84
Target Start/End: Complemental strand, 37919 - 37839
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctaca 84  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  37919 cgaggcgagagcctctgctcgccgtggcgagttcaggttagaatctcacaagtttaattccaggttcaatctcatcctaca 37839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 20309423 - 20309508
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  20309423 cgaggcgagagcctctgctcaccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctt 20309508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 23654187 - 23654117
Alignment:
Q  19 tgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    |||||||||||||||||||| || |||||||||  ||||||||||||||||||||||| ||||||| ||||    
T  23654187 tgctcgccgtggcgagttcaagtcagaatcccaacagtttaattccaggttcaatctcatcctacattctt 23654117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 42724940 - 42724986
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  42724940 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 42724986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 44756092 - 44756138
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  44756092 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 44756138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 23286179 - 23286264
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||||||||||||||||||||| | |||| || || ||| |||||| |||||||||| ||||||| ||||    
T  23286179 cgaggcgagagcctctgctcgccgtggcgagttcaggtcataatctcacaattttcattccatgttcaatctcatcctacattctt 23286264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 4163331 - 4163403
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| | | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  4163331 tataaatagagagctcgggatttgcattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 4163403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 27753893 - 27753952
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  27753893 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 27753952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 32451732 - 32451673
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  32451732 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 32451673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 28751483 - 28751555
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| | ||||||||||    
T  28751483 tataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctttggttttctc 28751555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 298617 - 298558
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||| ||||    
T  298617 cgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattc 298558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 22737983 - 22737924
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||| | ||||||||| |||||| ||||    
T  22737983 cgaggcgagagcctctgctcgccgtggcgagttcagttcagaatcccacaagtttcattc 22737924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 23660338 - 23660378
Alignment:
Q  1 tcacgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  23660338 tcacgaggcgagagcctctgctcgccgtggcgagttcaggt 23660378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 22731035 - 22730977
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    |||||||| |||| ||||| ||||||||||||||||| ||||||||| |||||| ||||    
T  22731035 gaggcgagagcctttgctccccgtggcgagttcaggtcagaatcccacaagtttcattc 22730977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 23076760 - 23076803
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaat 47  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||    
T  23076760 cgaggcgagagcctctactcgccgtggcgagttcaggtcagaat 23076803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 25176161 - 25176198
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  25176161 cgaggcgagggcctctactcgccatggcgagttcaggt 25176198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 3564 - 3360
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  3564 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcc 3465  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3464 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 3365  T
Q  390 ttctc 394  Q
    |||||    
T  3364 ttctc 3360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 190 - 394
Target Start/End: Original strand, 80971 - 81175
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  80971 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcc 81070  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  81071 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 81170  T
Q  390 ttctc 394  Q
    |||||    
T  81171 ttctc 81175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 32011066 - 32010862
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32011066 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 32010967  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32010966 ggtagatcatacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 32010867  T
Q  390 ttctc 394  Q
    |||||    
T  32010866 ttctc 32010862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 190 - 394
Target Start/End: Complemental strand, 32016240 - 32016036
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32016240 cttggagtatactagtgaatttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 32016141  T
Q  290 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggtt 389  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  32016140 ggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttctctggtt 32016041  T
Q  390 ttctc 394  Q
    |||||    
T  32016040 ttctc 32016036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 164 - 407
Target Start/End: Original strand, 2165394 - 2165638
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttgg-aatgtaaacacaaggatggagaaactagtgtaaagtgt 262  Q
    |||||||||||||||||||        ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  2165394 ggaacactagtgtataatgaaaaaattttggagtatactagtgagtttgtggagtctttgggaatgtaaacacaaggatggagaaactagtgtaaagtgt 2165493  T
Q  263 gaattgaaaattttatgtcccacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaa 362  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2165494 gaattgaaaattttatgtctcacatcgggtagatcacacactctagtagaaatcctccttataaattgagagctcgggaatagtattcttcactccaaaa 2165593  T
Q  363 ctgagaatcgaatactcttatctggttttctctcctctctgctcc 407  Q
     |||||||| ||| ||||| ||| |||||||||| ||||| ||||    
T  2165594 ttgagaatcaaatgctcttctctagttttctctcatctcttctcc 2165638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 43998546 - 43998693
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43998546 ggaacactagtgtataatgaaaaaaacttggagtatactagttggtttgtggagcctttgaaatgtaaacacaaggatggagaaactagtgtaaagtgtg 43998645  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  43998646 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 43998693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 17955134 - 17955281
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||||||       ||| ||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17955134 ggaacactagtgtataatggaaaagacttagagtatactagttgttttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtgaagtgtg 17955233  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  17955234 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 17955281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 190 - 311
Target Start/End: Complemental strand, 24885445 - 24885324
Alignment:
Q  190 cttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcg 289  Q
    ||||||||||||||||   | ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  24885445 cttggagtatactagttgttatgtggagactttggaatgtaaacacaaggatgtagaaactagtgtaaagtgtgaattgaaaattttatgtcccacattg 24885346  T
Q  290 ggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||    
T  24885345 ggtagatcacacactctagtag 24885324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 42513848 - 42513995
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | ||||||| | |||||||||||||||||||||| ||||| ||||||||||||||    
T  42513848 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagacattggaatgtaaacacaaggatgtagaaaatagtgtaaagtgtg 42513947  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||    
T  42513948 aattgaaaattttatgtcccacattggatagatcacacactctagtag 42513995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 21641184 - 21641273
Alignment:
Q  221 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||| ||||||||| |||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21641184 ttggaatgtaaatacaaggatgtagat-ctagtgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 21641273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 25362943 - 25362858
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  25362943 cgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctt 25362858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 21918803 - 21918717
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagttt-aattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||| | |||||||||||||||| ||||||| ||||    
T  21918803 cgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcatttccaggttcaatctcttcctacattctt 21918717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 312 - 394
Target Start/End: Complemental strand, 24885064 - 24884982
Alignment:
Q  312 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||||  ||||||| |||||||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  24885064 aaatcctctctataaatagagagctcgggaatggaattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 24884982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 31971583 - 31971653
Alignment:
Q  14 gcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctaca 84  Q
    |||||||||||||| ||||||||||||| |||||| || |||||||||||||||||||||||| |||||||    
T  31971583 gcctctgctcgccggggcgagttcaggtcagaatctcacaagtttaattccaggttcaatctcatcctaca 31971653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 21645574 - 21645620
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  21645574 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 21645620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 32014301 - 32014255
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  32014301 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 32014255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 16199449 - 16199365
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| || ||||||||| ||||||||||||||| |||||||||  |||||||||| |||||||||||| ||||||| ||||    
T  16199449 cgaggcgagagcgtctgctcgctgtggcgagttcaggtcagaatccca-cagtttaattctaggttcaatctcatcctacattctt 16199365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 21643835 - 21643907
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  21643835 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 21643907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 45130798 - 45130738
Alignment:
Q  29 ggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  45130798 ggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctt 45130738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 20536526 - 20536585
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||| ||||    
T  20536526 cgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccataagtttcattc 20536585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 21643020 - 21643092
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| | ||||||||||    
T  21643020 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctc 21643092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 21643395 - 21643467
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||| ||||||||| | ||||||||||||||||| ||||||||||| ||||| | ||||||||||    
T  21643395 tataaatagagacctcgggaatgggattcttcactccaaaaccgagaatcgaatcctcttctttggttttctc 21643467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 23406699 - 23406758
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||||| |||||| ||||    
T  23406699 cgaggcgagagcctctactcgccgtggcgagttcaggtcagaatcccacaagtttcattc 23406758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 330 - 393
Target Start/End: Original strand, 42514182 - 42514245
Alignment:
Q  330 gagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttct 393  Q
    ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  42514182 gagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctggttttct 42514245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 5 - 58
Target Start/End: Complemental strand, 16092142 - 16092089
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagttt 58  Q
    |||||||| |||||||||||||||||||||||||||| ||||| ||| ||||||    
T  16092142 gaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccaaaagttt 16092089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 21641520 - 21641592
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | ||||||||||    
T  21641520 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctc 21641592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 21641895 - 21641967
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | ||||||||||    
T  21641895 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctc 21641967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 21642270 - 21642342
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | ||||||||||    
T  21642270 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctc 21642342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 21642645 - 21642717
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||| ||||||||| | ||||||||||||||||  ||||||||||| ||||| | ||||||||||    
T  21642645 tataaatagagacctcgggaatgggattcttcactccaaaatcgagaatcgaatcctcttctttggttttctc 21642717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 6759575 - 6759634
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||| | ||| |||||| ||||    
T  6759575 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagatttccaaaagtttcattc 6759634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 18879040 - 18878981
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| ||||||||||| | |||||||||||||| ||||||||| |||||| ||||    
T  18879040 cgaggcgagagcctctgctcgtcttggcgagttcaggtcagaatcccacaagtttcattc 18878981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 18818212 - 18818170
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaa 46  Q
    ||||||||| |||||||||||||||||||||||||||| ||||    
T  18818212 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaa 18818170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 43998984 - 43999056
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||| |   |||||| |||| ||||||||||||||||| ||||| |||| |||||||    
T  43998984 tataaatagagagctcgggatttacattctttactctaaaactgagaatcgaatcctcttctctgattttctc 43999056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 41
Target Start/End: Complemental strand, 28648844 - 28648809
Alignment:
Q  6 aggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||| ||||||||||||||||||||||||||||    
T  28648844 aggcgagagcctctgctcgccgtggcgagttcaggt 28648809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 41598503 - 41598550
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatccca 51  Q
    ||||||||| ||||||||||||| |||||||||||||| ||| |||||    
T  41598503 cgaggcgagagcctctgctcgccatggcgagttcaggtcagattccca 41598550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 21674024 - 21674061
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  21674024 cgaggcgagggcctctactcgccatggcgagttcaggt 21674061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 38855052 - 38855015
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  38855052 cgaggcgagggcctctactcgccatggcgagttcaggt 38855015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 19434043 - 19434003
Alignment:
Q  118 actaagaatggtatttttgttgggaaagggtacgccactga 158  Q
    |||||| ||||  ||||||||||||||||||||||||||||    
T  19434043 actaaggatggggtttttgttgggaaagggtacgccactga 19434003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 118 - 158
Target Start/End: Complemental strand, 19570192 - 19570152
Alignment:
Q  118 actaagaatggtatttttgttgggaaagggtacgccactga 158  Q
    |||||| ||||  ||||||||||||||||||||||||||||    
T  19570192 actaaggatggggtttttgttgggaaagggtacgccactga 19570152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 21923731 - 21923695
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcagg 40  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  21923731 cgaggcgagagcctctgctcaccgtggcgagttcagg 21923695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 8534 - 8681
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8534 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 8633  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  8634 aatttaaaattttatgtcccacattgggtagatcacacactctagtag 8681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 8962 - 9034
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | ||||||||||||||||  ||||||||||| ||||| ||| ||||||||    
T  8962 tataaatagagagctcgggaatgggattcttcactccaaaaacgagaatcgaatcctcttctctagttttctc 9034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 83; Significance: 4e-39; HSPs: 5)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 164 - 311
Target Start/End: Original strand, 12986 - 13133
Alignment:
Q  164 ggaacactagtgtataatgnnnnnnncttggagtatactagtgagtttgtggagcctttggaatgtaaacacaaggatggagaaactagtgtaaagtgtg 263  Q
    |||||||||||||||| ||       ||||||||||||||||   | || |||| | ||||||||||||||||| |||| ||||||||||||||||||||    
T  12986 ggaacactagtgtatattggcaaaaacttggagtatactagttgttatgaggagacattggaatgtaaacacaatgatgtagaaactagtgtaaagtgtg 13085  T
Q  264 aattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  13086 aattgaaaattttatgtcccacattgggtagatcacacactctagtag 13133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 221 - 311
Target Start/End: Original strand, 18500 - 18590
Alignment:
Q  221 ttggaatgtaaacacaaggatggagaaactagtgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    ||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18500 ttggaatgtaaacacaatgatgtagaaactagtataaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactctagtag 18590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Original strand, 15233 - 15279
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15233 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 15279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 13493 - 13565
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||||||||| | |||||||||||||||||  |||||||||| ||||| ||||||||||||    
T  13493 tataaatagagagctcgggaatgggattcttcactccaaaaccaagaatcgaatcctcttctctggttttctc 13565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 322 - 394
Target Start/End: Original strand, 18946 - 19018
Alignment:
Q  322 tataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||| |||||||| ||| | |||||||| |||||||||| ||||||||||||||||| ||||||||||||    
T  18946 tataaatagagagctcaggattggtattctttactccaaaaccgagaatcgaatactcttctctggttttctc 19018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 66; Significance: 5e-29; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 51897 - 51982
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  51897 cgaggcgagagcctctgctcgccgtggcgagctcaggttagaatcccgtaagtttcattccaggttcaatctcgtcctacattctt 51982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 1604 - 1694
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactcttcacta 94  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| |||||||| || |||||||    
T  1604 cgaggcgagagcctctgctcgccgtcgcgagttcagtttagaattccataagtttaattccaggttcaatcacgtcctaccctattcacta 1694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 4 - 94
Target Start/End: Original strand, 7581 - 7671
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactcttcacta 94  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||| |||||||| || |||||||    
T  7581 cgaggcgagagcctctgctcgccgtcgcgagttcagtttagaattccataagtttaattccaggttcaatcacgtcctaccctattcacta 7671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 855 - 770
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||||| ||||||| ||||    
T  855 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaattccacaagtttaattccaggttcaatctcatcctacattctt 770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 10229 - 10144
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||| ||||    
T  10229 cgaggcgagagcctctgctccccgtggcgagttcaggtcagaatcccacaagtttaattccaggttcaatctcatcctacattctt 10144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 58; Significance: 3e-24; HSPs: 2)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 254 - 339
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||| ||||    
T  254 cgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttaattccagattcaatctcatcctacattctt 339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 5030 - 5115
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| ||||||||||||| |||||||||||||| ||||||||| |||||||||||||| ||||||||| ||||||| ||||    
T  5030 cgaggcgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttaattccagattcaatctcatcctacattctt 5115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 16597 - 16682
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||||||||| ||||||| ||| | |||||||||||||||||| ||||||||||||||||||||| ||||    
T  16597 cgaggcgagagcctctgctcgccgtgccgagttctggtcaaaatcccataagtttaatttcaggttcaatctcgtcctacattctt 16682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 2270 - 2350
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctaca 84  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||| |||||||    
T  2270 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagcatccctcaagtttaattccaggttcaatctcatcctaca 2350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 6928 - 7008
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctaca 84  Q
    ||||||||| |||||||||||||||||||||||||||| || |||||  |||||||||||||||||||||||| |||||||    
T  6928 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagcatccctcaagtttaattccaggttcaatctcatcctaca 7008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 13529 - 13614
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| ||| |||||| |||||||||||| |||| ||||||| ||||    
T  13529 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatgccacaagtttcattccaggttcagtctcatcctacattctt 13614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 54; Significance: 8e-22; HSPs: 3)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 3799 - 3884
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    |||| |||| ||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  3799 cgagacgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctt 3884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 7863 - 7948
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    |||| |||| ||||||||||||| |||||||||||||| ||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  7863 cgagacgagagcctctgctcgccatggcgagttcaggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctt 7948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 15588 - 15542
Alignment:
Q  114 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  15588 catcactaagaatggtatttttgttgggaaagggtacgccactgatg 15542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 15268 - 15183
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||||| | |||||| ||||||||||||||||| ||||||| ||||    
T  15268 cgaggcgagagcctctgctctccgtggcgagttcaggtcagaatcctacaagttttattccaggttcaatctcatcctacattctt 15183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 32382 - 32467
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||||||| |||||||||||||||||| |||||| || ||||||||| |||||||||||||||||||||||| ||| ||| ||||    
T  32382 cgaggcgagagcctctgctcgccgtggcaagttcaagtcagaatcccacaagtttaattccaggttcaatctcatcccacattctt 32467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 1233 - 1317
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    |||||||| ||||||||||||| |||||||||| ||| ||||||||| |||||| ||||||||||||||||| ||||||| ||||    
T  1233 gaggcgagagcctctgctcgccatggcgagttctggtcagaatcccacaagtttcattccaggttcaatctcatcctacattctt 1317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 13813 - 13885
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctc 76  Q
    ||||||||| |||||||||||||||||||||||||| | |||||| || ||||||||||||||||||||||||    
T  13813 cgaggcgagagcctctgctcgccgtggcgagttcagctcagaatctcacaagtttaattccaggttcaatctc 13885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 47304 - 47384
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctaca 84  Q
    ||||||||| |||||||| | |||||||||| |||||| ||||||||| |||||||||||||||||||||||| |||||||    
T  47304 cgaggcgagagcctctgcgctccgtggcgagctcaggtcagaatcccacaagtttaattccaggttcaatctcatcctaca 47384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 852 - 774
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtccta 82  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| | || |||||||||||| |||||    
T  852 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatctaggttcaatctcatccta 774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 37712 - 37654
Alignment:
Q  253 tgtaaagtgtgaattgaaaattttatgtcccacatcgggtagatcacacactctagtag 311  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  37712 tgtaaagtgtgaattgaaaattttatgtcccacattgggtagatcacacactccagtag 37654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 394
Target Start/End: Complemental strand, 37361 - 37279
Alignment:
Q  312 aaatcctccttataaattgagagctcgggaatagtattcttcactccaaaactgagaatcgaatactcttatctggttttctc 394  Q
    ||||||||  ||||||| ||||||||||||||   ||||||||||||||||| ||||||||||| ||||| ||||||||||||    
T  37361 aaatcctctctataaatagagagctcgggaatgagattcttcactccaaaaccgagaatcgaatcctcttctctggttttctc 37279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 167782 - 167704
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtccta 82  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| | || |||||||||||| |||||    
T  167782 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcaatctaggttcaatctcatccta 167704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 52230 - 52289
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  52230 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 52289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0718 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 4934 - 4849
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    |||||||||  ||||||||| |  |||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||| ||||    
T  4934 cgaggcgagatcctctgctctctttggcgagttcaggtcagaatcccataagttcaattccaggttcaatctcatcctacattctt 4849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 5166 - 5251
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    |||||| || |||||| ||||||||||||||||||||| |||| | || |||||| ||||||||||||||||| ||||||| ||||    
T  5166 cgaggcaagagcctctactcgccgtggcgagttcaggtcagaacctcacaagtttcattccaggttcaatctcatcctacattctt 5251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 11316 - 11231
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattccaggttcaatctcgtcctacactctt 89  Q
    ||||| ||| |||||| |||||| |||||||||||||| || |||||| |||||| ||||||||||||||||| ||||||| ||||    
T  11316 cgaggtgagagcctcttctcgccttggcgagttcaggtcagtatcccacaagtttcattccaggttcaatctcatcctacattctt 11231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0305 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0305
Description:

Target: scaffold0305; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 20721 - 20780
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  20721 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 20780  T

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Target: scaffold0292 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 3788 - 3847
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  3788 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttgattc 3847  T

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Target: scaffold0175 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 13410 - 13469
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  13410 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 13469  T

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Target: scaffold0021 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 124903 - 124962
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  124903 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 124962  T

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Target: scaffold0042 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 24104 - 24045
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||| ||||    
T  24104 cgaggcgagagcctctgctcgctgtggcgagttcaggtcagaatcccacaagtttcattc 24045  T

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Target: scaffold0145 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 39079 - 39124
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcc 49  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||    
T  39079 cgaggcgagagcctctgctcgccgtggcgagttcaggtcagaatcc 39124  T

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Target: scaffold0647 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 5925 - 5878
Alignment:
Q  3 acgaggcgagggcctctgctcgccgtggcgagttcaggttagaatccc 50  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||||||    
T  5925 acgaggcgagagcctctgctcgccgtggcaagttcaggtcagaatccc 5878  T

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Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21226 - 21265
Alignment:
Q  1 tcacgaggcgagggcctctgctcgccgtggcgagttcagg 40  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  21226 tcacgaggcgagagcctctgctcgccgtggcgagttcagg 21265  T

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Target: scaffold0056 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 17017 - 16958
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||||||||| ||||||||||||||||| ||||| ||| |||||| ||||    
T  17017 cgaggcgagagcctctgctctccgtggcgagttcaggtcagaattccaaaagtttcattc 16958  T

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Target: scaffold0034 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 51687 - 51628
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||| ||| |||||||||||||||||||||||||||| | ||||||| |||||| ||||    
T  51687 cgaggtgagagcctctgctcgccgtggcgagttcaggtcaaaatcccacaagtttcattc 51628  T

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Target: scaffold0034; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 32855 - 32892
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  32855 cgaggcgagggcctctactcgccatggcgagttcaggt 32892  T

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Target: scaffold0026 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 4 - 46
Target Start/End: Original strand, 40175 - 40217
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaa 46  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  40175 cgaggcgagagcctctgctcgccgtggcgagtacaggttagaa 40217  T

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Target: scaffold0639 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 8793 - 8846
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtt 57  Q
    ||||||||| |||||| || |||||||||||||||||| ||||||||| |||||    
T  8793 cgaggcgagagcctctactggccgtggcgagttcaggtcagaatcccacaagtt 8846  T

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Target: scaffold0217 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Complemental strand, 16402 - 16361
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttaga 45  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  16402 cgaggcgagagcctctgctcgccatggcgagttcaggttaga 16361  T

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Target: scaffold0141 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 39795 - 39832
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  39795 cgaggcgagagcctctgctcgccgtggcgagttcaggt 39832  T

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Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 25867 - 25830
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25867 cgaggcgagagcctctgctcgccgtggcgagttcaggt 25830  T

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Target: scaffold0122; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 33297 - 33238
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||| |||| ||||||||||||||||||||||| ||| | ||| |||||| ||||    
T  33297 cgaggcgagagcctttgctcgccgtggcgagttcaggtaagacttccaaaagtttcattc 33238  T

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Target: scaffold0049 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 75017 - 74980
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  75017 cgaggcgagagcctctgctcgccgtggcgagttcaggt 74980  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 4 - 57
Target Start/End: Complemental strand, 339753 - 339700
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtt 57  Q
    ||||||||| ||||||||||||||||||||||||| || ||| ||||| |||||    
T  339753 cgaggcgagagcctctgctcgccgtggcgagttcatgtcagattcccaaaagtt 339700  T

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Target: scaffold0810 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0810
Description:

Target: scaffold0810; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3248 - 3288
Alignment:
Q  1 tcacgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  3248 tcacgaggcgagggcctctactcgccatggcgagttcaggt 3288  T

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Target: scaffold0247 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 6597 - 6561
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcagg 40  Q
    ||||||||| |||||||||||||||||||||||||||    
T  6597 cgaggcgagagcctctgctcgccgtggcgagttcagg 6561  T

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Target: scaffold0130 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 28149 - 28192
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggttagaat 47  Q
    ||||||||| |||| ||||||||||||||||||||||| |||||    
T  28149 cgaggcgagagcctttgctcgccgtggcgagttcaggtcagaat 28192  T

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Target: scaffold0352 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 21 - 63
Target Start/End: Complemental strand, 17794 - 17752
Alignment:
Q  21 ctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    ||||||||||||||||||||| ||||||||| |||||| ||||    
T  17794 ctcgccgtggcgagttcaggtcagaatcccacaagtttcattc 17752  T

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Target: scaffold0211 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 28611 - 28573
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggtt 42  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  28611 cgaggcgagagcctctgctcgccatggcgagttcaggtt 28573  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 132972 - 133010
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggtt 42  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  132972 cgaggcgagagcctctgctcgccatggcgagttcaggtt 133010  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 5 - 63
Target Start/End: Original strand, 2170 - 2228
Alignment:
Q  5 gaggcgagggcctctgctcgccgtggcgagttcaggttagaatcccataagtttaattc 63  Q
    |||||||  |||||| |||||| |||||||||||||| ||||||||| |||||| ||||    
T  2170 gaggcgatagcctctactcgccatggcgagttcaggtcagaatcccacaagtttcattc 2228  T

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Target: scaffold1984 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 449 - 486
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  449 cgaggcgagagcctctgctcgccatggcgagttcaggt 486  T

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Target: scaffold0333 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 6932 - 6969
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  6932 cgaggcgagggcctctactcgccatggcgagttcaggt 6969  T

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Target: scaffold0333; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 14312 - 14349
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  14312 cgaggcgagggcctctactcgccatggcgagttcaggt 14349  T

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Target: scaffold0142 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 17099 - 17136
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  17099 cgaggcgagagcctctgctcgccatggcgagttcaggt 17136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 13259 - 13296
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  13259 cgaggcgagggcctctactcgccatggcgagttcaggt 13296  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 19585 - 19622
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| ||||||||||||| ||||||||||||||    
T  19585 cgaggcgagagcctctgctcgccatggcgagttcaggt 19622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 40231 - 40268
Alignment:
Q  4 cgaggcgagggcctctgctcgccgtggcgagttcaggt 41  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  40231 cgaggcgagagcctctactcgccgtggcgagttcaggt 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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