View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0854_low_1 (Length: 876)

Name: NF0854_low_1
Description: NF0854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0854_low_1
NF0854_low_1
[»] chr5 (40 HSPs)
chr5 (67-443)||(36756013-36756389)
chr5 (67-418)||(36748700-36749063)
chr5 (649-831)||(36755839-36756021)
chr5 (443-648)||(18625377-18625580)
chr5 (442-648)||(35660565-35660769)
chr5 (442-650)||(37266646-37266852)
chr5 (451-648)||(32129573-32129768)
chr5 (442-649)||(13032034-13032238)
chr5 (444-645)||(11775709-11775909)
chr5 (449-648)||(39902337-39902534)
chr5 (442-631)||(4895708-4895895)
chr5 (443-650)||(14349720-14349924)
chr5 (451-650)||(40753116-40753313)
chr5 (131-247)||(36755822-36755938)
chr5 (181-414)||(36767170-36767406)
chr5 (452-576)||(4592726-4592849)
chr5 (451-632)||(8440943-8441122)
chr5 (451-648)||(34827118-34827311)
chr5 (451-554)||(1475686-1475789)
chr5 (732-831)||(36756226-36756325)
chr5 (732-831)||(36748891-36748999)
chr5 (449-575)||(3057338-3057464)
chr5 (478-570)||(28142807-28142901)
chr5 (477-643)||(32793324-32793487)
chr5 (449-576)||(3057180-3057307)
chr5 (449-568)||(10173870-10173985)
chr5 (777-831)||(36767357-36767411)
chr5 (477-646)||(43309068-43309225)
chr5 (520-572)||(3041338-3041390)
chr5 (535-648)||(29341003-29341113)
chr5 (477-563)||(14688524-14688610)
chr5 (67-117)||(36772014-36772064)
chr5 (449-502)||(4348120-4348173)
chr5 (452-572)||(36290537-36290647)
chr5 (450-512)||(23253716-23253778)
chr5 (520-565)||(2984427-2984472)
chr5 (652-705)||(36748608-36748661)
chr5 (652-705)||(36767050-36767103)
chr5 (449-506)||(38283711-38283768)
chr5 (535-572)||(40162737-40162774)
[»] chr8 (24 HSPs)
chr8 (444-650)||(28069636-28069840)
chr8 (451-648)||(30426625-30426820)
chr8 (451-648)||(36991280-36991475)
chr8 (451-648)||(40695204-40695398)
chr8 (444-649)||(10652572-10652776)
chr8 (451-625)||(41511186-41511358)
chr8 (451-576)||(24101940-24102065)
chr8 (455-645)||(44859128-44859314)
chr8 (452-648)||(10672470-10672662)
chr8 (456-575)||(28318929-28319048)
chr8 (443-648)||(45113186-45113390)
chr8 (451-553)||(12177613-12177715)
chr8 (451-553)||(12422041-12422143)
chr8 (452-567)||(8412179-8412294)
chr8 (449-570)||(27490038-27490159)
chr8 (587-649)||(5033310-5033372)
chr8 (444-512)||(5033023-5033091)
chr8 (478-568)||(36748525-36748611)
chr8 (461-649)||(37966399-37966583)
chr8 (524-569)||(26749581-26749626)
chr8 (524-572)||(1937185-1937233)
chr8 (452-572)||(34612498-34612609)
chr8 (477-511)||(21492733-21492767)
chr8 (535-572)||(17867690-17867727)
[»] chr2 (21 HSPs)
chr2 (442-645)||(13238596-13238797)
chr2 (444-648)||(28564808-28565011)
chr2 (451-648)||(35316749-35316944)
chr2 (477-650)||(23259441-23259612)
chr2 (445-553)||(39465693-39465801)
chr2 (444-541)||(41983401-41983497)
chr2 (449-532)||(2061299-2061382)
chr2 (585-648)||(45625035-45625098)
chr2 (449-541)||(374499-374591)
chr2 (465-553)||(45625111-45625199)
chr2 (585-648)||(11864925-11864988)
chr2 (455-509)||(42075456-42075510)
chr2 (451-548)||(10877626-10877724)
chr2 (449-552)||(12949392-12949494)
chr2 (443-567)||(8988782-8988895)
chr2 (483-569)||(30709065-30709152)
chr2 (443-572)||(374919-375038)
chr2 (452-572)||(29188588-29188698)
chr2 (514-576)||(21454520-21454582)
chr2 (535-572)||(13780506-13780543)
chr2 (535-572)||(40254180-40254217)
[»] chr1 (32 HSPs)
chr1 (445-652)||(50294015-50294220)
chr1 (444-650)||(48327108-48327312)
chr1 (444-648)||(50484303-50484505)
chr1 (444-648)||(12151684-12151886)
chr1 (451-576)||(12380936-12381061)
chr1 (451-576)||(12385003-12385128)
chr1 (444-644)||(40328193-40328390)
chr1 (452-648)||(23861908-23862106)
chr1 (451-553)||(45977946-45978048)
chr1 (455-549)||(7841763-7841857)
chr1 (470-576)||(24977183-24977289)
chr1 (585-649)||(12380832-12380896)
chr1 (585-649)||(12384899-12384963)
chr1 (452-648)||(18976260-18976452)
chr1 (449-570)||(46608409-46608525)
chr1 (449-550)||(2845187-2845289)
chr1 (449-565)||(5047418-5047533)
chr1 (542-648)||(7840635-7840739)
chr1 (449-523)||(1609617-1609691)
chr1 (477-570)||(32887812-32887905)
chr1 (588-648)||(45978064-45978124)
chr1 (483-634)||(39426166-39426315)
chr1 (442-511)||(680101-680170)
chr1 (452-565)||(23916013-23916124)
chr1 (477-575)||(44483718-44483815)
chr1 (524-572)||(52280069-52280117)
chr1 (478-565)||(7844939-7845026)
chr1 (455-533)||(40988643-40988721)
chr1 (535-572)||(6948862-6948899)
chr1 (449-559)||(19910469-19910583)
chr1 (442-511)||(30077725-30077794)
chr1 (485-542)||(45970804-45970861)
[»] chr7 (33 HSPs)
chr7 (442-648)||(9559010-9559213)
chr7 (447-650)||(4888387-4888588)
chr7 (455-648)||(21151080-21151271)
chr7 (451-649)||(16366442-16366638)
chr7 (451-649)||(18198180-18198376)
chr7 (453-647)||(45260384-45260576)
chr7 (456-648)||(7362497-7362686)
chr7 (451-645)||(47226035-47226224)
chr7 (451-649)||(12139252-12139447)
chr7 (451-650)||(44647889-44648085)
chr7 (451-576)||(25084754-25084879)
chr7 (443-650)||(33450422-33450628)
chr7 (452-649)||(47500237-47500433)
chr7 (449-576)||(29630970-29631097)
chr7 (452-624)||(34985925-34986095)
chr7 (449-570)||(32915881-32915999)
chr7 (502-575)||(39855840-39855913)
chr7 (474-558)||(40019628-40019712)
chr7 (479-559)||(30153225-30153305)
chr7 (585-645)||(47271107-47271166)
chr7 (483-576)||(46802357-46802448)
chr7 (524-569)||(47799933-47799978)
chr7 (443-570)||(19889066-19889183)
chr7 (524-568)||(30588532-30588576)
chr7 (452-570)||(32916104-32916212)
chr7 (456-569)||(47080360-47080470)
chr7 (520-566)||(11828945-11828991)
chr7 (535-573)||(19027713-19027751)
chr7 (535-573)||(20726885-20726923)
chr7 (535-572)||(4269187-4269224)
chr7 (470-511)||(6568419-6568460)
chr7 (535-572)||(14696788-14696825)
chr7 (535-572)||(30102501-30102538)
[»] chr6 (25 HSPs)
chr6 (451-649)||(4804372-4804568)
chr6 (444-647)||(1249105-1249304)
chr6 (444-645)||(27826455-27826654)
chr6 (451-648)||(7162008-7162203)
chr6 (451-650)||(21159323-21159516)
chr6 (467-649)||(17944102-17944282)
chr6 (477-648)||(12412587-12412756)
chr6 (451-576)||(29698087-29698212)
chr6 (502-648)||(13089705-13089849)
chr6 (451-553)||(32737798-32737900)
chr6 (452-645)||(227522-227714)
chr6 (477-565)||(30460770-30460858)
chr6 (585-648)||(32737913-32737976)
chr6 (483-650)||(2800565-2800730)
chr6 (478-523)||(17398773-17398818)
chr6 (477-553)||(1516238-1516314)
chr6 (477-553)||(1518327-1518403)
chr6 (524-572)||(24484876-24484924)
chr6 (591-648)||(1516163-1516219)
chr6 (591-648)||(1518252-1518308)
chr6 (520-565)||(2720366-2720411)
chr6 (535-640)||(7215816-7215919)
chr6 (591-648)||(1515498-1515554)
chr6 (535-572)||(7098226-7098263)
chr6 (477-570)||(17275921-17276014)
[»] chr4 (41 HSPs)
chr4 (444-648)||(19901874-19902076)
chr4 (444-648)||(24073534-24073735)
chr4 (451-649)||(56558203-56558399)
chr4 (452-647)||(34778346-34778539)
chr4 (451-649)||(5763117-5763313)
chr4 (451-648)||(33247086-33247279)
chr4 (444-648)||(23610559-23610761)
chr4 (463-648)||(3952126-3952309)
chr4 (451-648)||(18206996-18207191)
chr4 (452-648)||(5416422-5416617)
chr4 (449-649)||(38079675-38079873)
chr4 (451-570)||(12241440-12241559)
chr4 (455-648)||(33262508-33262699)
chr4 (451-648)||(39862441-39862636)
chr4 (451-553)||(12153095-12153197)
chr4 (494-634)||(30567868-30568006)
chr4 (506-648)||(12312431-12312572)
chr4 (451-576)||(47922101-47922226)
chr4 (451-539)||(52018707-52018795)
chr4 (443-643)||(47922327-47922526)
chr4 (452-576)||(31862246-31862370)
chr4 (451-545)||(17080697-17080791)
chr4 (585-648)||(12153210-12153273)
chr4 (455-533)||(12312572-12312650)
chr4 (588-648)||(33524321-33524381)
chr4 (449-576)||(25442200-25442328)
chr4 (588-648)||(52018822-52018882)
chr4 (452-572)||(56269106-56269217)
chr4 (486-641)||(1871237-1871388)
chr4 (442-572)||(5524372-5524492)
chr4 (478-650)||(23474062-23474231)
chr4 (477-552)||(33841854-33841929)
chr4 (452-572)||(37002281-37002391)
chr4 (524-572)||(48084555-48084603)
chr4 (486-544)||(43447638-43447697)
chr4 (449-569)||(3326438-3326559)
chr4 (535-572)||(25219003-25219040)
chr4 (535-572)||(32146510-32146547)
chr4 (535-572)||(46238974-46239011)
chr4 (535-572)||(53526096-53526133)
chr4 (535-572)||(55160401-55160438)
[»] scaffold0012 (1 HSPs)
scaffold0012 (451-649)||(207987-208183)
[»] chr3 (25 HSPs)
chr3 (451-648)||(43719903-43720098)
chr3 (444-648)||(19830387-19830591)
chr3 (442-648)||(2229898-2230102)
chr3 (467-648)||(27033591-27033770)
chr3 (451-648)||(34373755-34373950)
chr3 (451-646)||(40851697-40851891)
chr3 (456-630)||(34373559-34373731)
chr3 (456-645)||(46167322-46167509)
chr3 (452-648)||(48084744-48084939)
chr3 (449-576)||(550842-550969)
chr3 (543-648)||(24754673-24754776)
chr3 (543-648)||(24763670-24763773)
chr3 (455-576)||(12402893-12403015)
chr3 (454-632)||(566746-566925)
chr3 (452-576)||(40810382-40810505)
chr3 (449-549)||(52859433-52859534)
chr3 (443-572)||(31523698-31523817)
chr3 (452-572)||(42613015-42613125)
chr3 (449-548)||(2310233-2310330)
chr3 (596-648)||(24647905-24647957)
chr3 (449-511)||(3009171-3009233)
chr3 (449-504)||(566988-567043)
chr3 (477-524)||(32577482-32577528)
chr3 (450-512)||(20485808-20485870)
chr3 (449-511)||(49289042-49289104)
[»] scaffold0008 (1 HSPs)
scaffold0008 (446-648)||(9157-9354)
[»] scaffold0035 (1 HSPs)
scaffold0035 (451-650)||(16351-16548)
[»] scaffold0250 (1 HSPs)
scaffold0250 (451-648)||(7071-7270)
[»] scaffold0006 (2 HSPs)
scaffold0006 (455-553)||(73889-73987)
scaffold0006 (587-644)||(73817-73874)
[»] scaffold0456 (2 HSPs)
scaffold0456 (477-553)||(13646-13722)
scaffold0456 (586-648)||(13737-13799)
[»] scaffold0126 (1 HSPs)
scaffold0126 (449-576)||(22468-22595)
[»] scaffold0009 (1 HSPs)
scaffold0009 (478-576)||(6461-6559)
[»] scaffold0171 (1 HSPs)
scaffold0171 (442-569)||(17339-17456)
[»] scaffold0664 (1 HSPs)
scaffold0664 (535-572)||(4731-4768)


Alignment Details
Target: chr5 (Bit Score: 304; Significance: 1e-170; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 304; E-Value: 1e-170
Query Start/End: Original strand, 67 - 443
Target Start/End: Complemental strand, 36756389 - 36756013
Alignment:
Q  67 ctttgtactgcaatgaaatttgatctttcaattcttcaatttcagctttcaacctgtcaattgtaacccagtgattatcttatttgatcagtaatttgac 166  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  36756389 ctttgtactgcaatgaaatttgatctttcaattcttcaattttagctttcaacctgtcaattgtaacccggtgattatcttatttgatcagtaatttgac 36756290  T
Q  167 attactcttgcaattttctacgcttaattcgttcaaagttttctttaatttatctcgttcatctttaagactaatcaccaannnnnnnaactcagaaatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||       ||||||  ||||    
T  36756289 attactcttgcaattttctacgcttaattcgttcaaagttttctttaatttatcccattcatctttaagactaatcgccaatttttttaactcaacaatc 36756190  T
Q  267 tctccaacaaaatcnnnnnnnnccttttcaatatcgctaaacttttgtccaatgacacgaagaaagttcgtacgaatgcaatccaccaggctggtttgga 366  Q
    ||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36756189 tctccaacaaaatcttttttttccttttcaatatcgctaaacttttgtccaatgacacgaagaaagttcgtacgaatgcaatccaccaggctggtttgga 36756090  T
Q  367 gtgccgtttcaaatcccaattccttaactttttcatgattcttctccatacccagattaatggggcatcaccatcac 443  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36756089 gtgccgtttcaaatcccaattccttaactttttcatgattcttctccatacccagattaatggggcatcaccatcac 36756013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 67 - 418
Target Start/End: Complemental strand, 36749063 - 36748700
Alignment:
Q  67 ctttgtactgcaatgaaatttgatctttcaattcttcaatttcagctttcaacctgtcaattgtaacccagtgattatcttatttgatcagtaatttgac 166  Q
    ||||||||||||||||  |||||| ||| ||||||||||||||||| || ||||||||||  ||||||||||||||||||| ||||||| ||||||||||    
T  36749063 ctttgtactgcaatgagttttgatattttaattcttcaatttcagcatttaacctgtcaaccgtaacccagtgattatcttctttgatctgtaatttgac 36748964  T
Q  167 attactcttgcaattttctacgcttaattcgtt---------caaagttttctttaatttatctcgttcatctttaagactaatcaccaannnnnnnaac 257  Q
    |||||||||| || |||||||| ||||| ||||         ||||||||||||||||||||| | ||||||||||||||||||||||||       |||    
T  36748963 attactcttggaactttctacgtttaatacgtttaattcgtccaaagttttctttaatttatcccattcatctttaagactaatcaccaatttttttaac 36748864  T
Q  258 tcagaaatctctccaacaaaatcnnnnnnnnccttttcaatatcgctaaacttttgtccaatgacacgaagaa---agttcgtacgaatgcaatccacca 354  Q
    |||| ||||||| |||||||| |        ||||||||||||||||||||||||| ||||||||||||||||   ||||| || || |||  |||||||    
T  36748863 tcagcaatctcttcaacaaaagctttgttttccttttcaatatcgctaaacttttgcccaatgacacgaagaagaaagttcttatgagtgctgtccacca 36748764  T
Q  355 ggctggtttggagtgccgtttcaaatcccaattccttaactttttcatgattcttctccatacc 418  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36748763 gactggtttggagtgccgtttcaaatcccaattccttaactttttcatgatacttctccatacc 36748700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 649 - 831
Target Start/End: Complemental strand, 36756021 - 36755839
Alignment:
Q  649 caccatcaccgctaccaccgatctcagtagagtatgatgtccacatatcatccatgcacaaaagatacagttgatgcacctgaaacccagtgattatctt 748  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  36756021 caccatcaccgctaccaccgatctcagtaaaatatgatgtccacatatcatcgatgcacaaaaggtacagttgatgcacctgaaacccagtgattatctt 36755922  T
Q  749 cttcgatcagtaatttgacattattctaggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 831  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36755921 cttcgatcagtaatttgacattactcttggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 36755839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 443 - 648
Target Start/End: Complemental strand, 18625580 - 18625377
Alignment:
Q  443 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 542  Q
    |||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  18625580 cgggtgaagatcctctccatttatgtgtttttcaatttctttcatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatg 18625481  T
Q  543 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 642  Q
    ||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||    
T  18625480 gtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatct 18625383  T
Q  643 tcaccc 648  Q
    ||||||    
T  18625382 tcaccc 18625377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 442 - 648
Target Start/End: Complemental strand, 35660769 - 35660565
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    |||||| ||||||||||| |||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  35660769 acgggttaagatcctctctatttatgtgtttctccgtttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgat 35660670  T
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  35660669 ggtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 35660572  T
Q  642 ttcaccc 648  Q
    |||||||    
T  35660571 ttcaccc 35660565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 442 - 650
Target Start/End: Original strand, 37266646 - 37266852
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    |||||| | ||||||||||||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||    
T  37266646 acgggttaggatcctctccatttacgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaactaaaatataattaatgat 37266745  T
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    ||||||||||||||||||||| |||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  37266746 ggtgggacccacttagtggtatgacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 37266843  T
Q  642 ttcacccca 650  Q
    |||||||||    
T  37266844 ttcacccca 37266852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 451 - 648
Target Start/End: Complemental strand, 32129768 - 32129573
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  32129768 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 32129669  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||||||||||||        ||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||    
T  32129668 cacttagtggtaggacccaccatcta--tttttggtgtctatctctctccaacttataaaactccatttattttgccaaatggagaggatcttcaccc 32129573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 123; E-Value: 1e-62
Query Start/End: Original strand, 442 - 649
Target Start/End: Original strand, 13032034 - 13032238
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    |||||| | |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || |||||||||||||| |||||||    
T  13032034 acgggttaggatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatctt-aaaaaaataaaatataattaatgat 13032132  T
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    ||||||||||| ||||||||||||| |||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||    
T  13032133 ggtgggacccatttagtggtaggactcaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatc 13032230  T
Q  642 ttcacccc 649  Q
    ||||||||    
T  13032231 ttcacccc 13032238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 444 - 645
Target Start/End: Original strand, 11775709 - 11775909
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatg 542  Q
    |||| |||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||| |||| |||||||||| |||||| |    
T  11775709 gggttaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaaagtaaaatataattaatgacg 11775808  T
Q  543 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 642  Q
    ||||||||||||||||||||||| ||||||||||        |||||||||||||||||||||| ||| ||||||||||||| ||||||||| |||||||    
T  11775809 gtgggacccacttagtggtaggatccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatct 11775906  T
Q  643 tca 645  Q
    |||    
T  11775907 tca 11775909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 449 - 648
Target Start/End: Original strand, 39902337 - 39902534
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    |||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||||||| |    
T  39902337 aagatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaa 39902436  T
Q  549 cccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
     ||| |||||||||||||||||||||||        |||| ||||||||||||||||||||| |||||||||||||| |||||||| |||| ||||||||    
T  39902437 tccatttagtggtaggacccaccatcta--tttcttgtgtttatctctctccaacttgtaaaactccatttattttgtcaaatggagaggaacttcaccc 39902534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 442 - 631
Target Start/End: Complemental strand, 4895895 - 4895708
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    |||||| | |||||||| ||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  4895895 acgggttaggatcctcttcatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgat 4895796  T
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaat 631  Q
    |||||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  4895795 ggtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaat 4895708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 443 - 650
Target Start/End: Original strand, 14349720 - 14349924
Alignment:
Q  443 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 542  Q
    ||||| |||||| ||||||||||||||||| || |||||||  ||||||| ||||||||||||||||| ||||||| ||| |||||||||| ||||||||    
T  14349720 cgggttaagatcttctccatttatgtgtttctccatttctttaatttggaaagataaagacacataaa-tcttgaaaaaagtaaaatataattaatgatg 14349818  T
Q  543 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 642  Q
    ||||||||||||||||||||||||||||||||||        |||||| ||||||||||||||  ||| ||||||||||||| |||||| || |||||||    
T  14349819 gtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctgtctctctccaacttacaaaactccatttattttaccaaatagagaggatct 14349916  T
Q  643 tcacccca 650  Q
    ||||||||    
T  14349917 tcacccca 14349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 451 - 650
Target Start/End: Complemental strand, 40753313 - 40753116
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||||||||||||||| || || |||||||  |||||||||||||||  |||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  40753313 gatcctctccatttatgtgcttctccatttctttaatttggagagataaaagcacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 40753214  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 650  Q
    ||||||||||||||||||||||| ||        |||||||||| ||||||||||| ||| ||  |||||||||||||||| || |||||||||||||||    
T  40753213 cacttagtggtaggacccaccatata--ttttttgtgtctatctttctccaacttgcaaaactttatttattttgccaaatagagaggatcttcacccca 40753116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 36755938 - 36755822
Alignment:
Q  131 aacccagtgattatcttatttgatcagtaatttgacattactcttgcaattttctacgcttaattcgttcaaagttttctttaatttatctcgttcatct 230  Q
    ||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||    
T  36755938 aacccagtgattatcttcttcgatcagtaatttgacattactcttggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 36755839  T
Q  231 ttaagactaatcaccaa 247  Q
    |||||||||||||||||    
T  36755838 ttaagactaatcaccaa 36755822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 181 - 414
Target Start/End: Complemental strand, 36767406 - 36767170
Alignment:
Q  181 tttctacgcttaattcgttcaaagttttctttaatttatctcgttcatctttaagactaatcaccaannnnnnnaactcagaaatctctccaacaaaatc 280  Q
    |||| ||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||| |||| |||       ||||||| ||||||| |||||||| |    
T  36767406 tttccacgcttaattcgtccaaagatttctttaaattatcccgttcatctttaagactgatcatcaaatttttcaactcagcaatctcttcaacaaaagc 36767307  T
Q  281 nnnnnnnnccttttcaatatcgctaaacttttgtccaatgacacgaagaa---agttcgtacgaatgcaatccaccaggctggtttggagtgccgtttca 377  Q
            ||||||||||||||||||||||||  ||||||||||||||||   || || | |||||||||||| |||||||||||||||||||| |||||    
T  36767306 tttattttccttttcaatatcgctaaactttttcccaatgacacgaagaagaaaggtcattcgaatgcaatcctccaggctggtttggagtgccttttca 36767207  T
Q  378 aatcccaattccttaactttttcatgattcttctcca 414  Q
    |||||||| ||||| ||||||||||||| ||| ||||    
T  36767206 aatcccaactcctttactttttcatgatacttttcca 36767170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 452 - 576
Target Start/End: Original strand, 4592726 - 4592849
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||||  ||||||||||| ||||| ||| |||||||||| |||||||||||||||||    
T  4592726 atcctctccatttatgtgtttctccatttcttcaatttggagagataat-acacataaaatattgaaaaaagtaaaatataattaatgatggtgggaccc 4592824  T
Q  552 acttagtggtaggacccaccatcta 576  Q
    ||||||||||| |||||||||||||    
T  4592825 acttagtggtaagacccaccatcta 4592849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 451 - 632
Target Start/End: Complemental strand, 8441122 - 8440943
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||| ||||||||||||||||| ||  |||| || ||||||||||||||| ||||||| |||||| || ||| |||||||||| |||||||||||||||     
T  8441122 gatcatctccatttatgtgtttctccgtttcatcaatttggagagataaatacacatacaatcttaaaaaaagtaaaatataattaatgatggtgggaca 8441023  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatg 632  Q
    |||||||||||| | | |||||||||        ||||||||||  |||||||||| ||| |||||||||||||||||||||    
T  8441022 cacttagtggtatgtcgcaccatcta--tttttggtgtctatctacctccaacttgcaaaactccatttattttgccaaatg 8440943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 451 - 648
Target Start/End: Original strand, 34827118 - 34827311
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggac 549  Q
    ||||||| |||||||| ||||| || |||||||  ||||| |||||||||||||||  |||| ||||| |||| |||||||||| ||| |||||||||||    
T  34827118 gatcctcaccatttatatgttt-tccatttcttaaatttgaagagataaagacaca--aaattttgaaaaaaagtaaaatataattaaagatggtgggac 34827214  T
Q  550 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||||||||||| ||||||||||         ||||||||||||||||||||| | | ||||||||||||||| ||||||| | |||||||||||    
T  34827215 ccacttagtggtaggatccaccatctattttttt--tgtctatctctctccaacttgcataactccatttattttgctaaatggagatgatcttcaccc 34827311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 451 - 554
Target Start/End: Complemental strand, 1475789 - 1475686
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||| ||||||||||||| |  |||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  1475789 gatcctcttcatttatgtgttttttcatttcttcaatttggagtgataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 1475690  T
Q  551 cact 554  Q
    ||||    
T  1475689 cact 1475686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 732 - 831
Target Start/End: Complemental strand, 36756325 - 36756226
Alignment:
Q  732 aacccagtgattatcttcttcgatcagtaatttgacattattctaggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 831  Q
    ||||| ||||||||||| || ||||||||||||||||||| ||| | ||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  36756325 aacccggtgattatcttatttgatcagtaatttgacattactcttgcaattttctacgcttaattcgttcaaagttttctttaatttatcccattcatct 36756226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 732 - 831
Target Start/End: Complemental strand, 36748999 - 36748891
Alignment:
Q  732 aacccagtgattatcttcttcgatcagtaatttgacattattctaggaattttc---------tacgcttaattcgtccaaagttttctttaatttatcc 822  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| |||| ||||         |||| ||||||||||||||||||||||||||||||||    
T  36748999 aacccagtgattatcttctttgatctgtaatttgacattactcttggaactttctacgtttaatacgtttaattcgtccaaagttttctttaatttatcc 36748900  T
Q  823 cgttcatct 831  Q
    | |||||||    
T  36748899 cattcatct 36748891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 575
Target Start/End: Original strand, 3057338 - 3057464
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    |||||| ||||||||||||| | | ||| |||||||||||| |||||||||||||||| ||||  ||||| ||| || || |||| |||||||| ||| |    
T  3057338 aagatcatctccatttatgtttctctcactttcttccattttgagagataaagacacaaaaaagtttgaaaaaagtataaaataattaatgatgatggaa 3057437  T
Q  549 cccacttagtggtaggacccaccatct 575  Q
    | ||||| ||||||||| ||| |||||    
T  3057438 ctcactttgtggtaggatccatcatct 3057464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 478 - 570
Target Start/End: Complemental strand, 28142901 - 28142807
Alignment:
Q  478 tttcttccatttggagagataaagacacataaaa-tcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggacccac 570  Q
    ||||||||||||||| ||  |||||||||||||| ||||||| |||| |||||||||| ||||||||||||||| |||||| |||||||| ||||    
T  28142901 tttcttccatttggaaaggcaaagacacataaaaatcttgaaaaaaagtaaaatataattaatgatggtgggactcacttaatggtaggatccac 28142807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 477 - 643
Target Start/End: Original strand, 32793324 - 32793487
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 576  Q
    ||||||| |||||| ||||||||||||  ||||||||||||| ||| |||||||||| | ||||| |||||||| ||||||| ||| ||  || ||||||    
T  32793324 atttctttcatttgaagagataaagacgaataaaatcttgaaaaaagtaaaatataattgatgattgtgggacctacttagtagtaagaatcatcatcta 32793423  T
Q  577 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 643  Q
            |||| |||||||||| || ||||||| ||||||||||||||| |||| || ||||||||    
T  32793424 --ttttttgtgtatatctctctctaaattgtaaa-ctccatttattttgctaaatagataggatctt 32793487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 449 - 576
Target Start/End: Complemental strand, 3057307 - 3057180
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    |||||| |||||| |||||| | | || |||||||| ||||| |||||||||||||| |||| | || || ||| |||||||||| |||||||  || ||    
T  3057307 aagatcttctccaattatgtctctctccatttcttctatttgaagagataaagacacttaaattttttaaaaaagtaaaatataattaatgattatgtga 3057208  T
Q  549 cccacttagtggtaggacccaccatcta 576  Q
    | |||||| |||||||| ||||||||||    
T  3057207 ctcacttaatggtaggatccaccatcta 3057180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 449 - 568
Target Start/End: Original strand, 10173870 - 10173985
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    ||||||||||||||||||||  || || ||||| | |||||||||||||||||||||    ||| ||||| ||| ||||| |||| |||||||||| | |    
T  10173870 aagatcctctccatttatgtccttctccatttccttcatttggagagataaagacac----aattttgaaaaaagtaaaaaataattaatgatggtagaa 10173965  T
Q  549 cccacttagtggtaggaccc 568  Q
    |||| |||||| ||||||||    
T  10173966 cccatttagtgataggaccc 10173985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 777 - 831
Target Start/End: Complemental strand, 36767411 - 36767357
Alignment:
Q  777 ggaattttctacgcttaattcgtccaaagttttctttaatttatcccgttcatct 831  Q
    |||| |||| ||||||||||||||||||| ||||||||| |||||||||||||||    
T  36767411 ggaactttccacgcttaattcgtccaaagatttctttaaattatcccgttcatct 36767357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 646
Target Start/End: Original strand, 43309068 - 43309225
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 576  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |||||          |||||||||||| ||||| ||| ||||| || |||| |||||    
T  43309068 atttcttcaatttgaagagataaagacacataaaatcttgaaaaaaat----------taatgatggtggaacccatttaatggtaagatccactatcta 43309157  T
Q  577 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcac 646  Q
             ||||||||||||||||||||| ||| |||||||||||||  |||||  | |||||||||||    
T  43309158 tttttta--tgtctatctctctccaacttgcaaaactccatttattttatcaaataaagaggatcttcac 43309225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 520 - 572
Target Start/End: Complemental strand, 3041390 - 3041338
Alignment:
Q  520 aaaataaaatataactaatgatggtgggacccacttagtggtaggacccacca 572  Q
    ||||||||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  3041390 aaaataaaaaataattaatgatggtgggacccgcttagtgataggacccacca 3041338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 535 - 648
Target Start/End: Original strand, 29341003 - 29341113
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 634  Q
    |||||||||||||||||||||| | ||||||||||| |||||        |||||||||||||||||| ||| | | ||||||||||| | |||||||||    
T  29341003 taatgatggtgggacccacttaatagtaggacccactatcta--ttttctgtgtctatctctctccaaattgcata-ctccatttattataccaaatgga 29341099  T
Q  635 caggatcttcaccc 648  Q
     |||||||| ||||    
T  29341100 gaggatctttaccc 29341113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 477 - 563
Target Start/End: Original strand, 14688524 - 14688610
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtag 563  Q
    |||||||||||||||||||||||||||| | ||||  || || ||| | ||| ||| ||||||||||||| | ||||||| ||||||    
T  14688524 atttcttccatttggagagataaagacatacaaaaatttaaaaaaagtcaaaaatatctaatgatggtggaatccacttaatggtag 14688610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 117
Target Start/End: Complemental strand, 36772064 - 36772014
Alignment:
Q  67 ctttgtactgcaatgaaatttgatctttcaattcttcaatttcagctttca 117  Q
    ||||||||||||| |||||||||||||||| ||||| ||||||||| ||||    
T  36772064 ctttgtactgcaaagaaatttgatctttcagttctttaatttcagccttca 36772014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 502
Target Start/End: Complemental strand, 4348173 - 4348120
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaaga 502  Q
    ||||||||||| |||||||| ||| ||||||| || ||||||||||||||||||    
T  4348173 aagatcctctctatttatgtctttctcaatttgttacatttggagagataaaga 4348120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 572
Target Start/End: Original strand, 36290537 - 36290647
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||||||||||   ||| |  |||| |||||||| |||||||||||||||||||||          | ||||| |||| |||||||||||||| ||    
T  36290537 atcctctccatttataaattttttcatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggatcc 36290626  T
Q  552 acttagtggtaggacccacca 572  Q
    |||||||| ||||||||||||    
T  36290627 acttagtgataggacccacca 36290647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 450 - 512
Target Start/End: Original strand, 23253716 - 23253778
Alignment:
Q  450 agatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaat 512  Q
    ||||||| ||||||||  | ||| || |||||| ||||||||||||||| |||||||||||||    
T  23253716 agatcctatccatttaaatttttctccatttctaccatttggagagatagagacacataaaat 23253778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 520 - 565
Target Start/End: Complemental strand, 2984472 - 2984427
Alignment:
Q  520 aaaataaaatataactaatgatggtgggacccacttagtggtagga 565  Q
    ||||||||| |||| |||||||||||||||||| |||||| |||||    
T  2984472 aaaataaaaaataattaatgatggtgggacccatttagtgatagga 2984427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 705
Target Start/End: Complemental strand, 36748661 - 36748608
Alignment:
Q  652 catcaccgctaccaccgatctcagtagagtatgatgtccacatatcatccatgc 705  Q
    ||||||| || |||| |||||||||| |  ||||||||||||||||||||||||    
T  36748661 catcacctctcccactgatctcagtaaaaaatgatgtccacatatcatccatgc 36748608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 652 - 705
Target Start/End: Complemental strand, 36767103 - 36767050
Alignment:
Q  652 catcaccgctaccaccgatctcagtagagtatgatgtccacatatcatccatgc 705  Q
    ||||||| || |||| |||||||||| |  ||||||||||||||||||||||||    
T  36767103 catcaccactgccactgatctcagtaaaaaatgatgtccacatatcatccatgc 36767050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 506
Target Start/End: Original strand, 38283711 - 38283768
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacaca 506  Q
    |||||||||||||||||  | |||||| |||||| |||||| |||||||| |||||||    
T  38283711 aagatcctctccatttaaatttttatctatttctaccatttagagagatatagacaca 38283768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Original strand, 40162737 - 40162774
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40162737 taatgatggtgggatccacttagtgataggacccacca 40162774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 154; Significance: 3e-81; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 444 - 650
Target Start/End: Original strand, 28069636 - 28069840
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 543  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  28069636 gggtgaagatcctctccatttatgtgtttttcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatgg 28069735  T
Q  544 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 643  Q
    |||||||||||||||||||||||||||||||||        |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  28069736 tgggacccacttagtggtaggacccaccatcta--ttttttgtgtctttctctctccaacttgcaaatctccatttattttgccaaatggagaggatctt 28069833  T
Q  644 cacccca 650  Q
    |||||||    
T  28069834 cacccca 28069840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 451 - 648
Target Start/End: Complemental strand, 30426820 - 30426625
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  30426820 gatcctctccatttatgtgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 30426721  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||| ||| | ||||||||||||||||||||| ||| |||||||||    
T  30426720 cacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagagggtcttcaccc 30426625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 451 - 648
Target Start/End: Original strand, 36991280 - 36991475
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||| ||||||||||||| || |||||||| |||||||||||||||||||| |||||||||||| ||| | |||||||| ||||||||||||||||    
T  36991280 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacgtaaaatcttgaaaaaagtcaaatataattaatgatggtgggacc 36991379  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||||| ||||||         ||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  36991380 cacttagtggtaggacccatcatctatttctta--tgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 36991475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 451 - 648
Target Start/End: Complemental strand, 40695398 - 40695204
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||| | |||||||| |||||| |||||||| |||||||| |||||||| ||||||||||||||| ||| ||||||||||||||||||||||| ||     
T  40695398 gatcctccctatttatgtatttatccatttcttcaatttggagggataaagaaacataaaatcttgaaaaaagtaaaatataactaatgatggtggaact 40695299  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||| ||||||||        |||||||||||||||||||||  ||| ||||||||||||||| ||||||| | |||||||||||    
T  40695298 cacttagtggtaggacctaccatcta--ttttttgtgtctatctctctccaacttccaaa-ctccatttattttgctaaatggagaagatcttcaccc 40695204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 444 - 649
Target Start/End: Complemental strand, 10652776 - 10652572
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa--taaaatataactaatgat 541  Q
    |||| |||||||||||||||||||||||| |  |||||||| ||||||||||||||| ||||||||||| ||||| ||||   ||||||||| |||||||    
T  10652776 gggttaagatcctctccatttatgtgtttcttcatttcttcaatttggagagataaa-acacataaaattttgaaaaaaagtaaaaatataattaatgat 10652678  T
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    ||||||||||| ||||| ||| ||||||||||| |        || ||||||||||||||||||| ||| | ||||||||||| ||||||||| ||||||    
T  10652677 ggtgggacccaattagtagtatgacccaccatcaa--ttttttgtatctatctctctccaacttgcaaaacaccatttattttaccaaatggagaggatc 10652580  T
Q  642 ttcacccc 649  Q
    ||||||||    
T  10652579 ttcacccc 10652572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 451 - 625
Target Start/End: Original strand, 41511186 - 41511358
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||||||||| | |    
T  41511186 gatcctctccatttatgtgtttttccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaaac 41511285  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttg 625  Q
    ||||||||| |||||||||| |||||         | ||||||||| ||||||||| ||| ||||||||||||||    
T  41511286 cacttagtgataggacccactatctatttttta--tatctatctctttccaacttgcaaaactccatttattttg 41511358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 451 - 576
Target Start/End: Original strand, 24101940 - 24102065
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||| ||  |||||||||||||||||||| |||||||||||| ||||| |||||||| |||||||||||| ||     
T  24101940 gatcctctccatttatgtgtttttctatttttttaatttggagagataaagacacgtaaaatcttgaaaaaaatgaaatataattaatgatggtggaact 24102039  T
Q  551 cacttagtggtaggacccaccatcta 576  Q
    ||||||||||||||| ||||||||||    
T  24102040 cacttagtggtaggatccaccatcta 24102065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 455 - 645
Target Start/End: Complemental strand, 44859314 - 44859128
Alignment:
Q  455 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 554  Q
    ||||||||||| |||||| ||  ||||||  |||||||||||||||||||| | |||| ||  | |||||||||||||| ||||||||||||||||||||    
T  44859314 ctctccatttacgtgtttttccttttctttaatttggagagataaagacacgtgaaattttttaaaaaataaaatataattaatgatggtgggacccact 44859215  T
Q  555 tagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 645  Q
    ||||||||| ||||||||||||          ||||||||||||| |||||| ||| |||||||||||||| ||||| || ||||||||||    
T  44859214 tagtggtagaacccaccatctattttta----gtctatctctctctaacttgcaaaactccatttattttgtcaaatagagaggatcttca 44859128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 452 - 648
Target Start/End: Complemental strand, 10672662 - 10672470
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    ||||||| ||||||||||||| |  |||| ||| ||||||||||||||| | ||||||||| || || |   |||||||||| ||||||||||||||| |    
T  10672662 atcctcttcatttatgtgtttcttcatttattcaatttggagagataaaaatacataaaattttaaaaagggtaaaatataattaatgatggtgggactc 10672563  T
Q  552 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||||||||| ||||||||||        |||||||  ||||||||||||| ||| ||||||||||||||||||||||| || ||||||||||    
T  10672562 acttagtggtaggatccaccatcta--ttttttgtgtcta--tctctccaacttgcaaaactccatttattttgccaaatggagagaatcttcaccc 10672470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 456 - 575
Target Start/End: Complemental strand, 28319048 - 28318929
Alignment:
Q  456 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 555  Q
    |||||||||| |||||| || |||||||| ||||||||||| ||||||||||||||| || || ||| |||||||||| |||||||||| ||||||||||    
T  28319048 tctccatttacgtgtttctccatttcttcaatttggagagacaaagacacataaaattttaaaaaaagtaaaatataattaatgatggttggacccactt 28318949  T
Q  556 agtggtaggacccaccatct 575  Q
    ||||||||||||||| ||||    
T  28318948 agtggtaggacccactatct 28318929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 443 - 648
Target Start/End: Original strand, 45113186 - 45113390
Alignment:
Q  443 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 542  Q
    ||||| || ||||||||||||||| |  || |  |||| | ||||||||||||||| ||||||||||||| ||||| ||||||||| |||| ||||||||    
T  45113186 cgggtcaaaatcctctccatttatatccttcttcatttttaccatttggagagatatagacacataaaattttgaaaaaaataaaaaataattaatgatg 45113285  T
Q  543 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 642  Q
     |||||| ||||||||||| ||||||||||||||        |||||||| ||||||||| ||| ||| | | |||||||||  |||||||| |||||||    
T  45113286 atgggacacacttagtggttggacccaccatcta-ttcttttgtgtctatgtctctccaaattgcaaaacacaatttattttagcaaatggagaggatct 45113384  T
Q  643 tcaccc 648  Q
    | ||||    
T  45113385 taaccc 45113390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 451 - 553
Target Start/End: Complemental strand, 12177715 - 12177613
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||||| |||||||||||| || |||||||| ||||  |||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||| |    
T  12177715 gatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatggtgggatc 12177616  T
Q  551 cac 553  Q
    |||    
T  12177615 cac 12177613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 451 - 553
Target Start/End: Complemental strand, 12422143 - 12422041
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||||| |||||||||||| || |||||||| ||||  |||||||| ||||  |||||||||||| ||||||||||||||||||||||||||||| |    
T  12422143 gatcctctctatttatgtgtttctccatttcttcaatttaaagagataaggacaattaaaatcttgaaaaaaataaaatataactaatgatggtgggatc 12422044  T
Q  551 cac 553  Q
    |||    
T  12422043 cac 12422041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 452 - 567
Target Start/End: Original strand, 8412179 - 8412294
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    ||||||||||||||||| ||| |  |||| |||||||| |||||||||| ||||||||||| ||||| ||| |||||||||| ||| ||||||| || |     
T  8412179 atcctctccatttatgtttttcttcattttttccatttagagagataaatacacataaaatattgaaaaaagtaaaatataattaacgatggtgagatct 8412278  T
Q  552 acttagtggtaggacc 567  Q
    ||||||||||||||||    
T  8412279 acttagtggtaggacc 8412294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 570
Target Start/End: Complemental strand, 27490159 - 27490038
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    |||||| ||||||||||||| ||| ||||||||||||||||| ||||| ||| | ||||||||||||||| ||| |||||||||| |||||||  |  ||    
T  27490159 aagatcttctccatttatgtctttctcaatttcttccatttgaagagacaaaaatacataaaatcttgaaaaaagtaaaatataattaatgatatttaga 27490060  T
Q  549 cccacttagtggtaggacccac 570  Q
    | ||||||||| ||||| ||||    
T  27490059 ctcacttagtgataggatccac 27490038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 587 - 649
Target Start/End: Original strand, 5033310 - 5033372
Alignment:
Q  587 gtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  5033310 gtctatctctctccaacttgcaaaactccatttattttgccaaatggaaaggatcttcacccc 5033372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 444 - 512
Target Start/End: Original strand, 5033023 - 5033091
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaat 512  Q
    |||| |||||||||||||||||| ||||| || |||||||| |||||||||||||||||||||||||||    
T  5033023 gggttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaat 5033091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 478 - 568
Target Start/End: Complemental strand, 36748611 - 36748525
Alignment:
Q  478 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggaccc 568  Q
    ||||||||||||||||||||||||||||| | || |||||  ||||||||  |||| |||||||||||||| ||||||| |||||||||||    
T  36748611 tttcttccatttggagagataaagacacagagaagcttga--aaaataaa--ataattaatgatggtgggatccacttaatggtaggaccc 36748525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 649
Target Start/End: Complemental strand, 37966583 - 37966399
Alignment:
Q  461 atttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtgg 560  Q
    |||||||| ||| || |||||||  ||||||||||||||||| ||||||||  || || ||| |||||||||| ||||| |  ||||  | | |||||||    
T  37966583 atttatgtctttctccatttcttttatttggagagataaagatacataaaaatttaaaaaaagtaaaatataattaatggtattgggttcaa-ttagtgg 37966485  T
Q  561 taggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    ||||||| || |||||        |||| ||||||||| ||| ||| |||| |||||||||||||||||||||| |||||||| |||||    
T  37966484 taggacctacaatctatttttt--gtgtttatctctcttcaaattgcaaat-tccatttattttgccaaatggagaggatcttaacccc 37966399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 569
Target Start/End: Complemental strand, 26749626 - 26749581
Alignment:
Q  524 taaaatataactaatgatggtgggacccacttagtggtaggaccca 569  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  26749626 taaaaaataattaatgatggtgggacccacttagtgataggaccca 26749581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 524 - 572
Target Start/End: Complemental strand, 1937233 - 1937185
Alignment:
Q  524 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 572  Q
    ||||| |||| ||||||||||||||||| ||||||| ||||||||||||    
T  1937233 taaaaaataattaatgatggtgggacccgcttagtgataggacccacca 1937185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 452 - 572
Target Start/End: Original strand, 34612498 - 34612609
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||||||||||   ||| || |||| |||||||| ||||||||||||||||||||         ||   |||| |||| ||||||||||| |||||    
T  34612498 atcctctccatttataaatttttccatttgttccatttagagagataaagacacataaa---------aagtaaaaaaataattaatgatggtgagaccc 34612588  T
Q  552 acttagtggtaggacccacca 572  Q
    |||||||| ||||||||||||    
T  34612589 acttagtgataggacccacca 34612609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 477 - 511
Target Start/End: Original strand, 21492733 - 21492767
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaa 511  Q
    |||||||||||||||||||||||||||||| ||||    
T  21492733 atttcttccatttggagagataaagacacacaaaa 21492767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Complemental strand, 17867727 - 17867690
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  17867727 taatgatggtgggatccacttagtgataggacccacca 17867690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 1e-74; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 442 - 645
Target Start/End: Original strand, 13238596 - 13238797
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  13238596 acgggtgaagatcctctccatttatgcgtttctcaatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgat 13238695  T
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    |||||||||||||| ||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  13238696 ggtgggacccacttggtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 13238793  T
Q  642 ttca 645  Q
    ||||    
T  13238794 ttca 13238797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 444 - 648
Target Start/End: Original strand, 28564808 - 28565011
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatc-ttgaacaaaataaaatataactaatgatg 542  Q
    ||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||| || || ||| |||||||||| ||||||||    
T  28564808 gggtgaagatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttttaaaaaagtaaaatataattaatgatg 28564907  T
Q  543 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 642  Q
    ||||||||||||||||||||||||||||||||||        |||||||||||||| ||||||  ||| ||||||||||||||||||||||| |||||||    
T  28564908 gtgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctacaacttaaaaaactccatttattttgccaaatggagaggatct 28565005  T
Q  643 tcaccc 648  Q
    ||||||    
T  28565006 tcaccc 28565011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 451 - 648
Target Start/End: Original strand, 35316749 - 35316944
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||||||||||| |||||| || |||||||| ||||||||||||||||||| ||||||||||||| ||| |||||||||| ||||||||||||||||    
T  35316749 gatcctctccatttacgtgtttctccatttcttcaatttggagagataaagacatataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 35316848  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||| ||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  35316849 cacttagtggtaggatccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 35316944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 477 - 650
Target Start/End: Complemental strand, 23259612 - 23259441
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 576  Q
    |||||||| |||| ||| |||||||||| |||||||||| || ||| |||||||||| |||||||||||||| ||||||||| ||||||||||||| |||    
T  23259612 atttcttcaattttgagggataaagacatataaaatcttaaaaaaagtaaaatataattaatgatggtgggatccacttagtagtaggacccaccagcta 23259513  T
Q  577 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 650  Q
            |||||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||||    
T  23259512 --ttttttgtgtctatctctctccaacttgcaaaacaccatttattttgccaaatggagaggatcttcacccca 23259441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 445 - 553
Target Start/End: Original strand, 39465693 - 39465801
Alignment:
Q  445 ggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggt 544  Q
    ||||| |||||||||||||||||||||| || |||| ||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| ||||||||||    
T  39465693 ggtgatgatcctctccatttatgtgtttctccattttttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgatggt 39465792  T
Q  545 gggacccac 553  Q
    |||||||||    
T  39465793 gggacccac 39465801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 444 - 541
Target Start/End: Complemental strand, 41983497 - 41983401
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    |||| |||||||||||||||||||||||| || |||||||  |||||||||||||||||||||| |||||||||| ||| |||||||||| |||||||    
T  41983497 gggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacat-aaatcttgaaaaaagtaaaatataattaatgat 41983401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 449 - 532
Target Start/End: Original strand, 2061299 - 2061382
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatata 532  Q
    ||||||||||||||||||  || | |||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||    
T  2061299 aagatcctctccatttattagtatctcaatttcttccatttggagagataaagacgcataaaatcttgaaaaaagtaaaatata 2061382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 585 - 648
Target Start/End: Complemental strand, 45625098 - 45625035
Alignment:
Q  585 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  45625098 gtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcaccc 45625035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 374591 - 374499
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    ||||| |||||||||||||||||| ||  |||||| ||||| |||||||||| ||||||||||||||||| ||| |||||||||| |||||||    
T  374591 aagattctctccatttatgtgtttctccctttctttcatttagagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatgat 374499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 465 - 553
Target Start/End: Complemental strand, 45625199 - 45625111
Alignment:
Q  465 atgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 553  Q
    |||||||| || |||||||| |||| ||||||||||||||| |||||||||||| || |||||||| || |||||||||||||||||||    
T  45625199 atgtgtttctccatttcttcaatttagagagataaagacacgtaaaatcttgaaaaatataaaataaaattaatgatggtgggacccac 45625111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 585 - 648
Target Start/End: Original strand, 11864925 - 11864988
Alignment:
Q  585 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||||||| |||||||||||||    
T  11864925 gtgtctatctctctccaacttgtaaaactccatttattttgataaatggagaggatcttcaccc 11864988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 455 - 509
Target Start/End: Complemental strand, 42075510 - 42075456
Alignment:
Q  455 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataa 509  Q
    ||||||||||||  ||||||| |||||||||||||||||||||||||||||||||    
T  42075510 ctctccatttattagtttatccatttcttccatttggagagataaagacacataa 42075456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 451 - 548
Target Start/End: Original strand, 10877626 - 10877724
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatct--tgaacaaaataaaatataactaatgatggtggga 548  Q
    |||||||| ||||||||||||| || |||||||| ||||||||||||||| ||||||||||| |    || ||||| |||||||| ||||||||||||||    
T  10877626 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaa-acacataaaatttaaaaaaaaaaatgaaatataattaatgatggtggga 10877724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 449 - 552
Target Start/End: Original strand, 12949392 - 12949494
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    |||||| ||||||| ||||| ||| ||  ||||| | ||||||||||||||||| ||||||||||||||| ||| ||||| |||| |||||| || ||||    
T  12949392 aagatcttctccatctatgtctttctccgtttctcctatttggagagataaagatacataaaatcttgaaaaaagtaaaa-ataattaatgacggcggga 12949490  T
Q  549 ccca 552  Q
    ||||    
T  12949491 ccca 12949494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 443 - 567
Target Start/End: Original strand, 8988782 - 8988895
Alignment:
Q  443 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 542  Q
    ||||| || |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||           |||||| |||| ||||||||    
T  8988782 cgggtcaatatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa-----------ataaaaaataattaatgatg 8988870  T
Q  543 gtgggacccacttagtggtaggacc 567  Q
    ||||||||||||||||| |||||||    
T  8988871 gtgggacccacttagtgataggacc 8988895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 483 - 569
Target Start/End: Original strand, 30709065 - 30709152
Alignment:
Q  483 tccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggaccca 569  Q
    |||||||||| ||||| |||| || ||||  ||||| |||| ||||| | || |||||||||||||| ||||||||||||||||||||    
T  30709065 tccatttggaaagatatagactcaaaaaaatttgaaaaaaagtaaaaaacaattaatgatggtgggatccacttagtggtaggaccca 30709152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 443 - 572
Target Start/End: Original strand, 374919 - 375038
Alignment:
Q  443 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 542  Q
    ||||| || ||| |||||||||||   ||| || |||| |||||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  374919 cgggtcaatatcttctccatttataaatttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 375008  T
Q  543 gtgggacccacttagtggtaggacccacca 572  Q
    ||||||||||||||||  ||||||||||||    
T  375009 gtgggacccacttagtaataggacccacca 375038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 572
Target Start/End: Original strand, 29188588 - 29188698
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||    
T  29188588 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtgggaccc 29188677  T
Q  552 acttagtggtaggacccacca 572  Q
     ||||||| |||||| |||||    
T  29188678 gcttagtgataggacgcacca 29188698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 514 - 576
Target Start/End: Complemental strand, 21454582 - 21454520
Alignment:
Q  514 ttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 576  Q
    ||||| ||| ||||| |||| |||||||||||| ||||||||| ||||| ||||||| |||||    
T  21454582 ttgaaaaaagtaaaaaataattaatgatggtggaacccacttaatggtatgacccacaatcta 21454520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Original strand, 13780506 - 13780543
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  13780506 taatgatggtgggatccacttagtgataggacccacca 13780543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Complemental strand, 40254217 - 40254180
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40254217 taatgatggtgggatccacttagtgataggacccacca 40254180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 139; Significance: 3e-72; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 139; E-Value: 3e-72
Query Start/End: Original strand, 445 - 652
Target Start/End: Complemental strand, 50294220 - 50294015
Alignment:
Q  445 ggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggt 544  Q
    |||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  50294220 ggtgaagaccctctccatttacgtgtttctcaatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgatggt 50294121  T
Q  545 gggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttc 644  Q
     ||| |||||||||||||||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  50294120 aggatccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaatctccatttattttgccaaatgaagaggatcttc 50294023  T
Q  645 accccacc 652  Q
    ||||||||    
T  50294022 accccacc 50294015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 444 - 650
Target Start/End: Complemental strand, 48327312 - 48327108
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatg 542  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||| || |||||||||||||| ||||||||    
T  48327312 gggttaagatcctctccatttatgtgtttatcaatttcttccatttggagatataaaggtacataaaatcttgaaaaaaaataaaatataattaatgatg 48327213  T
Q  543 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 642  Q
    || ||||||||||||||||||||| |||||||||         ||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||    
T  48327212 gt-ggacccacttagtggtaggactcaccatctattttttt--tgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatct 48327116  T
Q  643 tcacccca 650  Q
    ||||||||    
T  48327115 tcacccca 48327108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 444 - 648
Target Start/End: Original strand, 50484303 - 50484505
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 543  Q
    |||| |||||||||||||||||||||||| || |||||||  ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| ||    
T  50484303 gggttaagatcctctccatttatgtgtttctccatttctttaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgacgg 50484402  T
Q  544 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 643  Q
    |||||||||||||||||| | ||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||    
T  50484403 tgggacccacttagtggttgtacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatctt 50484500  T
Q  644 caccc 648  Q
    |||||    
T  50484501 caccc 50484505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 444 - 648
Target Start/End: Original strand, 12151684 - 12151886
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 543  Q
    |||| ||||||||| |||||||||||||| || |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  12151684 gggttaagatcctccccatttatgtgtttctccatttattcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 12151783  T
Q  544 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 643  Q
    ||||||||||||||||||||||||||| |||||        |||||| ||||||||||||| | ||| ||||||||||||||||||||||| | ||||||    
T  12151784 tgggacccacttagtggtaggacccacaatcta--ttttttgtgtctttctctctccaactggcaaaactccatttattttgccaaatggagaagatctt 12151881  T
Q  644 caccc 648  Q
    |||||    
T  12151882 caccc 12151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 451 - 576
Target Start/End: Complemental strand, 12381061 - 12380936
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||     
T  12381061 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 12380962  T
Q  551 cacttagtggtaggacccaccatcta 576  Q
    ||||||||||||| ||||||||||||    
T  12380961 cacttagtggtagaacccaccatcta 12380936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 451 - 576
Target Start/End: Complemental strand, 12385128 - 12385003
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||     
T  12385128 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggact 12385029  T
Q  551 cacttagtggtaggacccaccatcta 576  Q
    ||||||||||||| ||||||||||||    
T  12385028 cacttagtggtagaacccaccatcta 12385003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 444 - 644
Target Start/End: Original strand, 40328193 - 40328390
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaa-gacacataaaatcttgaacaaaa-taaaatataactaatgat 541  Q
    |||| |||||||||| ||||||||||||| |  |||||||  ||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||    
T  40328193 gggttaagatcctcttcatttatgtgtttcttcatttctttaatttggagagataaaagacacataaaatcttgaaaaaaagtaaaatataactaatgat 40328292  T
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    ||||| |||||||||||||| ||||||||||||||        |||||||  ||||||||| ||| ||| ||||||||||||||||||||||| ||||||    
T  40328293 ggtggaacccacttagtggtgggacccaccatcta---tttttgtgtcta--tctctccaatttgcaaaactccatttattttgccaaatggagaggatc 40328387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 452 - 648
Target Start/End: Complemental strand, 23862106 - 23861908
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||| |||| |||||||| || |||||||| ||||||| ||||||||||||||||||||||| || |||||||||||||| |||||||||||||| |    
T  23862106 atcctcttcattcatgtgtttctctatttcttcaatttggaaagataaagacacataaaatcttgaaaaaaaataaaatataattaatgatggtgggatc 23862007  T
Q  551 cacttagtggtagga---cccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacc 647  Q
    |||||||||||||||    ||||||||||        |||||||||||||||||||||| ||| || |||||||||||| |||| || ||||| ||||||    
T  23862006 cacttagtggtaggattcaccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacttcatttattttgctaaatagagaggatattcacc 23861909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 451 - 553
Target Start/End: Original strand, 45977946 - 45978048
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| |||| |||||||    
T  45977946 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaacgatgctgggacc 45978045  T
Q  551 cac 553  Q
    |||    
T  45978046 cac 45978048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 455 - 549
Target Start/End: Complemental strand, 7841857 - 7841763
Alignment:
Q  455 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggac 549  Q
    |||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||    
T  7841857 ctctccatttatatgtttttccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggac 7841763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 470 - 576
Target Start/End: Original strand, 24977183 - 24977289
Alignment:
Q  470 tttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacccacttagtggtaggaccc 568  Q
    |||||| ||||||| ||||| |||||||||| ||| ||||||||||||| |||| |||||||||||||||||| |||| |||||||||||||||||| ||    
T  24977183 tttatccatttcttacatttagagagataaataca-ataaaatcttgaaaaaaaataaaatataactaatgattgtggaacccacttagtggtaggatcc 24977281  T
Q  569 accatcta 576  Q
    ||||||||    
T  24977282 accatcta 24977289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 585 - 649
Target Start/End: Complemental strand, 12380896 - 12380832
Alignment:
Q  585 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  12380896 gtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 12380832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 585 - 649
Target Start/End: Complemental strand, 12384963 - 12384899
Alignment:
Q  585 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  12384963 gtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 12384899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 452 - 648
Target Start/End: Complemental strand, 18976452 - 18976260
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||||||||||||  || |  |||||| ||||||||||||||| | ||||  ||||| ||||| ||||||||| |||| |||||||| |||||||     
T  18976452 atcctctccatttatgtccttcttcatttctaccatttggagagatataaacac--aaaattttgaaaaaaataaaa-ataattaatgatgatgggacct 18976356  T
Q  552 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||| |||| ||| ||||||||||        |||||||||||||||||| ||| ||| ||| |||||||||  |||||||| |||||||| ||||    
T  18976355 acttaatggttggatccaccatcta-ttcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatcttaaccc 18976260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 449 - 570
Target Start/End: Complemental strand, 46608525 - 46608409
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    ||||||||||||||||||||  |   | |||||||||||||||||| |||||||||||  || | ||||| ||| ||||| |||| |||||||||||||     
T  46608525 aagatcctctccatttatgtcct---ccatttcttccatttggagaaataaagacaca--aagttttgaaaaaagtaaaaaataattaatgatggtgggt 46608431  T
Q  549 cccacttagtggtaggacccac 570  Q
    ||||||||||||||||||||||    
T  46608430 cccacttagtggtaggacccac 46608409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 449 - 550
Target Start/End: Original strand, 2845187 - 2845289
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttct-tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggg 547  Q
    |||||||||||||||||||| ||| || |||||| || ||||||||||||||| ||||| ||||| ||||| | | |||||||||| |||||||||||||    
T  2845187 aagatcctctccatttatgtttttctctatttctatcaatttggagagataaatacacacaaaattttgaaaatagtaaaatataattaatgatggtggg 2845286  T
Q  548 acc 550  Q
    |||    
T  2845287 acc 2845289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 449 - 565
Target Start/End: Complemental strand, 5047533 - 5047418
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    ||||||||||||||||||   | | || ||||||||||||| ||||||||||| |||| ||||  ||||| |||||| || |||| ||||||||||||||    
T  5047533 aagatcctctccatttattactatctccatttcttccatttagagagataaaggcacaaaaaagtttgaa-aaaatataaaataattaatgatggtggga 5047435  T
Q  549 cccacttagtggtagga 565  Q
    ||||| |||||||||||    
T  5047434 cccacatagtggtagga 5047418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 542 - 648
Target Start/End: Complemental strand, 7840739 - 7840635
Alignment:
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    |||||||||| |||| |||||||||||| ||||||        |||||||||||||||||||||  ||| ||||||||||| ||||||||| | ||||||    
T  7840739 ggtgggacccgcttaatggtaggacccatcatctatttctt--gtgtctatctctctccaacttacaaaactccatttattctgccaaatgaataggatc 7840642  T
Q  642 ttcaccc 648  Q
    |||||||    
T  7840641 ttcaccc 7840635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 449 - 523
Target Start/End: Complemental strand, 1609691 - 1609617
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa 523  Q
    |||||||||| ||||||||| |||  | ||||||| ||||| ||||| |||||||||||||||||||||| ||||    
T  1609691 aagatcctcttcatttatgtcttttcccatttctttcatttagagaggtaaagacacataaaatcttgaagaaaa 1609617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 477 - 570
Target Start/End: Complemental strand, 32887905 - 32887812
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccac 570  Q
    ||||||| |||||||||||||| |||| || ||||  ||||| |||||  || |||| |||||||||||||||||| ||| |||||||| ||||    
T  32887905 atttctttcatttggagagatatagactcaaaaaagtttgaaaaaaattgaaaataattaatgatggtgggacccatttaatggtaggatccac 32887812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 648
Target Start/End: Original strand, 45978064 - 45978124
Alignment:
Q  588 tctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||||| ||| |||||||||||||  ||||| || |||||||||||||    
T  45978064 tctatctctctccaacttgcaaaactccatttattttatcaaatagagaggatcttcaccc 45978124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 483 - 634
Target Start/End: Original strand, 39426166 - 39426315
Alignment:
Q  483 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnn 582  Q
    |||||||||||||||| |||| || |   ||||  | ||| ||||| |||| ||||||| |||||||||| ||||||||||||||||| |||||          
T  39426166 tccatttggagagatatagactcaaattttcttagaaaaagtaaaaaataattaatgatagtgggacccaattagtggtaggacccactatcta--tttt 39426263  T
Q  583 nngtgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 634  Q
      |||||||||||||||||| ||||  |  ||||||||||||  ||||||||    
T  39426264 atgtgtctatctctctccaaattgtgtacttccatttattttatcaaatgga 39426315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 680170 - 680101
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 511  Q
    |||||| | ||||||||||||||||   |||||||||||  || ||||||||||||||||||||| ||||    
T  680170 acgggttaggatcctctccatttataactttatcaatttactctatttggagagataaagacacacaaaa 680101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 565
Target Start/End: Original strand, 23916013 - 23916124
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    ||||||||||||| | | ||| || |||| || |||||||||| ||||| ||||| ||||| ||||| ||| |  || |||| |||||||||||||||||    
T  23916013 atcctctccatttgtatttttctccatttatttcatttggagatataaaaacaca-aaaat-ttgaaaaaagtttaaaataattaatgatggtgggaccc 23916110  T
Q  552 acttagtggtagga 565  Q
    || |||||||||||    
T  23916111 acgtagtggtagga 23916124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 477 - 575
Target Start/End: Original strand, 44483718 - 44483815
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatct 575  Q
    ||||||| |||||| ||||||||||||||  | ||| ||| || ||||||||| |||| |||||||||||| | ||| ||| ||||||||||||| ||||    
T  44483718 atttcttgcatttgaagagataaagacac--acaattttgaaaaaaaataaaaaataattaatgatggtggaatccatttaatggtaggacccacaatct 44483815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 524 - 572
Target Start/End: Complemental strand, 52280117 - 52280069
Alignment:
Q  524 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 572  Q
    ||||| |||| |||||||||||||| |||||||||| ||||||||||||    
T  52280117 taaaaaataattaatgatggtgggatccacttagtgataggacccacca 52280069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 478 - 565
Target Start/End: Original strand, 7844939 - 7845026
Alignment:
Q  478 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtagga 565  Q
    ||||||||||||| ||||||||||| ||| | ||  ||||| ||| || ||  ||| |||| |||||||||| |||||||||||||||    
T  7844939 tttcttccatttgaagagataaagatacaaagaagtttgaaaaaagtataaactaattaataatggtgggacacacttagtggtagga 7845026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 455 - 533
Target Start/End: Original strand, 40988643 - 40988721
Alignment:
Q  455 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataa 533  Q
    ||||||||||||   ||| || |||| ||| ||||||||||||||||||||| ||||| ||||| ||| ||||| ||||    
T  40988643 ctctccatttataactttctccattttttctatttggagagataaagacacacaaaattttgaaaaaagtaaaaaataa 40988721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Complemental strand, 6948899 - 6948862
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  6948899 taatgatggtgggatccacttagtgataggacccacca 6948862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 559
Target Start/End: Original strand, 19910469 - 19910583
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttc-----ttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatg 542  Q
    |||| ||||| ||||||||| ||| || |||||     ||||||||||||||||||  ||||||||||| ||| || |||||||||||||| |||| |||    
T  19910469 aagaacctcttcatttatgtctttctctatttcttccattccatttggagagataa--acacataaaattttgaaaaaaaataaaatataattaataatg 19910566  T
Q  543 gtgggacccacttagtg 559  Q
    ||  ||||||| |||||    
T  19910567 gtatgacccacctagtg 19910583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 511
Target Start/End: Complemental strand, 30077794 - 30077725
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 511  Q
    |||||| || |||||||||||||||   ||| || |||| |||||||| |||| ||||||||||||||||    
T  30077794 acgggtcaatatcctctccatttataaatttctctatttgttccatttagagaaataaagacacataaaa 30077725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 485 - 542
Target Start/End: Original strand, 45970804 - 45970861
Alignment:
Q  485 catttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 542  Q
    |||||| ||||||||||||||| ||||| ||||| ||| ||||| |||| ||||||||    
T  45970804 catttgaagagataaagacacacaaaattttgaaaaaagtaaaaaataattaatgatg 45970861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 1e-71; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 442 - 648
Target Start/End: Complemental strand, 9559213 - 9559010
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    ||||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  9559213 acgggtgaagatc-tctccatttatatgtttctcgatttcttccatttggagagataaagacacataaaatcttgaaaaaaataaaatataattaatgat 9559115  T
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    |||||||||||||||||||||||||||||||||||        || ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  9559114 ggtgggacccacttagtggtaggacccaccatcta--ttttttgtatctatctctctccaacttgcaaatctccatttattttgccaaatggagaggatc 9559017  T
Q  642 ttcaccc 648  Q
    |||||||    
T  9559016 ttcaccc 9559010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 2e-67
Query Start/End: Original strand, 447 - 650
Target Start/End: Original strand, 4888387 - 4888588
Alignment:
Q  447 tgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgg 546  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| ||||||||||||    
T  4888387 tgaagatcctcttcatttatgtgtttctcaatttcttccatttggagagataaagacacataaaatcttaaaaaacataaaatataattaatgatggtgg 4888486  T
Q  547 gacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcac 646  Q
    |||| ||||||||||||||||||| |||||        |||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  4888487 gacctacttagtggtaggacccactatcta--ttttttgtgtctatctctctccaacttgcaaatctccatttattttgtcaaatggagaggatcttcac 4888584  T
Q  647 ccca 650  Q
    ||||    
T  4888585 ccca 4888588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 2e-61
Query Start/End: Original strand, 455 - 648
Target Start/End: Original strand, 21151080 - 21151271
Alignment:
Q  455 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 554  Q
    |||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||    
T  21151080 ctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccact 21151179  T
Q  555 tagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||| || |||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  21151180 tagtggtaggatcctccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 21151271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 451 - 649
Target Start/End: Original strand, 16366442 - 16366638
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||| ||||||||||||||||| || |||||||| ||||||||||||||| |||| |||||||||||| ||| |||||||||| |||||||||||||||     
T  16366442 gatcatctccatttatgtgtttctccatttcttcaatttggagagataaaaacacgtaaaatcttgaaaaaagtaaaatataattaatgatggtgggaca 16366541  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    ||||||||||||||| ||||||||||         ||||||||||||||||||||| ||| |||||||||||||| |||||||| ||||||||||||||    
T  16366542 cacttagtggtaggatccaccatctatttctta--tgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcacccc 16366638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 451 - 649
Target Start/End: Original strand, 18198180 - 18198376
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| ||||| |||||||||  |||||||||||||||| |||||||||||||| |||||||||||||||     
T  18198180 gatcctctccatttatgtgtttctccatttcttcaatttgtagagataaaatcacataaaatcttgaaaaaaataaaatataattaatgatggtgggact 18198279  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    |||||||||| || ||||||||||||        |||||||| | ||||||| ||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  18198280 cacttagtggcagaacccaccatcta--ttttttgtgtctatttatctccaatttgcaaaactccatttattttgccaaatggagaggatcttcacccc 18198376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 453 - 647
Target Start/End: Complemental strand, 45260576 - 45260384
Alignment:
Q  453 tcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccca 552  Q
    ||||||| |||||||||||| || |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||| ||||| |||    
T  45260576 tcctctctatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggatcca 45260477  T
Q  553 cttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacc 647  Q
    ||||||||||||| |||| |||||        |||||||||||||||||||||| ||| ||| ||||||||||||||||||| ||||||||||||    
T  45260476 cttagtggtaggatccacaatcta--ttttttgtgtctatctctctccaacttgcaaaactcaatttattttgccaaatggagaggatcttcacc 45260384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 456 - 648
Target Start/End: Original strand, 7362497 - 7362686
Alignment:
Q  456 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 555  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||| ||    
T  7362497 tctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaacccattt 7362596  T
Q  556 agtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||| |||||||||||||        |||||||||||||||||| ||| ||| |||||||||||||| |||||||| | |||||||||||    
T  7362597 agtggtacgacccaccatcta--ttttttgtgtctatctctctccaatttgcaaaactccatttattttgtcaaatggaga-gatcttcaccc 7362686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 451 - 645
Target Start/End: Complemental strand, 47226224 - 47226035
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||| | ||| |||||||||| ||||||||||||||||    
T  47226224 gatcctctccatttatgtgtttctctatttcttcaatttggagagataaa-acacataaaatcttggaaaaagtaaaatataattaatgatggtgggacc 47226126  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 645  Q
    || |||||||| ||||||||||| |         |||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||    
T  47226125 catttagtggtgggacccaccatat----tttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttca 47226035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 451 - 649
Target Start/End: Original strand, 12139252 - 12139447
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga-c 549  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||  |||||||||||||| || ||| |||||||||| |||||||||||||| |    
T  12139252 gatcctctccatttatgtgtttctccatttcttcaatttggagagataa--acacataaaatcttaaaaaaagtaaaatataattaatgatggtgggacc 12139349  T
Q  550 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    ||||||| |||||||||||||||||||        |||||||||||||||||||||| ||| || |||||||||||||||||| | || |||||||||||    
T  12139350 ccacttaatggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacttcatttattttgccaaatgaagagaatcttcacccc 12139447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 451 - 650
Target Start/End: Original strand, 44647889 - 44648085
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgg--ga 548  Q
    |||||||||||||||||||||| || |||||||| |||||   ||||||||||||||||||||||||| ||  |||||||||| ||||||||| ||  ||    
T  44647889 gatcctctccatttatgtgtttctccatttcttcaatttg---agataaagacacataaaatcttgaaaaatgtaaaatataattaatgatggagggaga 44647985  T
Q  549 cccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||| ||| ||||||||||        |||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  44647986 cccacttagtggtcggatccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 44648083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 451 - 576
Target Start/End: Complemental strand, 25084879 - 25084754
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||| ||  ||||| ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  25084879 gatcctctccatttatgtgtttctccatttttttaatttgaagagataaagacacataaaattttgaaaaaaataaaatataattaatgatggtgggacc 25084780  T
Q  551 cacttagtggtaggacccaccatcta 576  Q
    ||||||||||||||||||||||||||    
T  25084779 cacttagtggtaggacccaccatcta 25084754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 443 - 650
Target Start/End: Original strand, 33450422 - 33450628
Alignment:
Q  443 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 542  Q
    ||||| || ||||||| |||||||||  || || |||||| ||||||||||||||| | ||||| ||||| ||||| ||||||||| |||| ||||||||    
T  33450422 cgggtcaaaatcctcttcatttatgtccttctccatttctaccatttggagagatataaacacacaaaattttgaaaaaaataaaaaataattaatgatg 33450521  T
Q  543 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 642  Q
     |||||||||||||||||| ||||||||||||||        |||||||||||||||||| ||| ||| ||| |||||||||  |||||||| |||||||    
T  33450522 atgggacccacttagtggttggacccaccatcta-ttcttttgtgtctatctctctccaaattgcaaaactcaatttattttagcaaatggagaggatct 33450620  T
Q  643 tcacccca 650  Q
    | ||||||    
T  33450621 taacccca 33450628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 452 - 649
Target Start/End: Complemental strand, 47500433 - 47500237
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||||||||||||  || || |||||| |||||| |||||||| ||||||| ||||| ||||| ||||||||| |||| |||||||| ||||||||    
T  47500433 atcctctccatttatgtccttctccatttctaccatttagagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 47500334  T
Q  552 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    |||||||||| ||||||||||||||        |||||||||||||||||| ||  ||| ||| |||||||||   ||||||| |||||||| |||||    
T  47500333 acttagtggttggacccaccatcta-ttcttttgtgtctatctctctccaaattacaaaactcaatttattttagtaaatggagaggatcttaacccc 47500237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 576
Target Start/End: Original strand, 29630970 - 29631097
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    ||||||||||||||| |||| ||| || ||||||| |||||||||| ||||||||||||||||| ||||| ||| ||||  |||| ||||||| ||||||    
T  29630970 aagatcctctccattcatgtctttctccatttctttcatttggagatataaagacacataaaattttgaaaaaagtaaagaataattaatgatagtggga 29631069  T
Q  549 cccacttagtggtaggacccaccatcta 576  Q
    || || ||||||| |||||||| |||||    
T  29631070 cctacatagtggttggacccactatcta 29631097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 452 - 624
Target Start/End: Complemental strand, 34986095 - 34985925
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttg-aacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||||||||||||| ||| || |||||| ||||||||||||||| ||  ||||||||| ||| || ||||||||| |||| |||||||| ||||||     
T  34986095 atcctctccatttatgtctttctccatttctaccatttggagagatatag--acataaaattttgaaaaaaaataaaaaataattaatgatgatgggact 34985998  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttatttt 624  Q
    || ||||||||  |||||||||||||        |||||||||||||||||| ||| ||| ||| |||||||||    
T  34985997 catttagtggtttgacccaccatcta-ttcttttgtgtctatctctctccaaattgcaaaactcaatttatttt 34985925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 570
Target Start/End: Original strand, 32915881 - 32915999
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    ||||||||| ||||||||||  || || |||||||||||||||||||||||||||||| ||||  ||    |||| ||||||||| | ||||||||||||    
T  32915881 aagatcctccccatttatgttcttctccatttcttccatttggagagataaagacacaaaaaagttt---taaaaaaaaatataattcatgatggtggga 32915977  T
Q  549 cccacttagtggtaggacccac 570  Q
    | |||||| |||||||||||||    
T  32915978 ctcacttaatggtaggacccac 32915999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 502 - 575
Target Start/End: Complemental strand, 39855913 - 39855840
Alignment:
Q  502 acacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatct 575  Q
    |||| |||||||||||| ||| |||||| ||| |||||||| |||||||||||||||||||||||| |||||||    
T  39855913 acacttaaaatcttgaaaaaagtaaaatttaattaatgatgatgggacccacttagtggtaggaccgaccatct 39855840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 474 - 558
Target Start/End: Original strand, 40019628 - 40019712
Alignment:
Q  474 tcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagt 558  Q
    |||||||| |||||||||||||||||| ||||| ||||||||||| ||| || ||  ||| ||||||||||||||| || |||||    
T  40019628 tcaatttcctccatttggagagataaaaacacaaaaaatcttgaaaaaagtataaagtaattaatgatggtgggactcatttagt 40019712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 479 - 559
Target Start/End: Complemental strand, 30153305 - 30153225
Alignment:
Q  479 ttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtg 559  Q
    |||||||||||||||||||||||||| | ||||  ||||| |||||| || |||| |||||||||| | || |||||||||    
T  30153305 ttcttccatttggagagataaagacaaaaaaaaaattgaaaaaaatataaaataattaatgatggtagtactcacttagtg 30153225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 585 - 645
Target Start/End: Complemental strand, 47271166 - 47271107
Alignment:
Q  585 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 645  Q
    |||||||||||||||||| ||| ||| ||||||||||||||| ||||||| ||||||||||    
T  47271166 gtgtctatctctctccaaattgcaaa-ctccatttattttgctaaatggagaggatcttca 47271107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 483 - 576
Target Start/End: Complemental strand, 46802448 - 46802357
Alignment:
Q  483 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 576  Q
    |||||||||||||||||| |||||  |||  ||||| |||  | || |||| ||| | ||||||||||||||||||||||||||||||| ||||    
T  46802448 tccatttggagagataaaaacaca--aaagtttgaagaaagcataaaataattaacggtggtgggacccacttagtggtaggacccaccgtcta 46802357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 524 - 569
Target Start/End: Complemental strand, 47799978 - 47799933
Alignment:
Q  524 taaaatataactaatgatggtgggacccacttagtggtaggaccca 569  Q
    ||||| |||| ||||||||||||||||||||||||| |||||||||    
T  47799978 taaaaaataattaatgatggtgggacccacttagtgataggaccca 47799933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 570
Target Start/End: Complemental strand, 19889183 - 19889066
Alignment:
Q  443 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 542  Q
    ||||| || ||||||||||| |||   ||| || |||| |||||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  19889183 cgggtaaatatcctctccatctataaatttctccatttattccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 19889094  T
Q  543 gtgggacccacttagtggtaggacccac 570  Q
    |||| |||||||||||| ||||||||||    
T  19889093 gtggaacccacttagtgataggacccac 19889066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 524 - 568
Target Start/End: Original strand, 30588532 - 30588576
Alignment:
Q  524 taaaatataactaatgatggtgggacccacttagtggtaggaccc 568  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||    
T  30588532 taaaaaataattaatgatggtgggacccacttagtgataggaccc 30588576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 452 - 570
Target Start/End: Original strand, 32916104 - 32916212
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||||||||||   ||| || ||||||||||||| |||||||||| ||||| ||||          ||||||| |||| |||||||||||| | ||    
T  32916104 atcctctccatttataactttctccatttcttccattttgagagataaatacacacaaaa----------aataaaaaataattaatgatggtggaatcc 32916193  T
Q  552 acttagtggtaggacccac 570  Q
    ||||||||||| |||||||    
T  32916194 acttagtggtatgacccac 32916212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 569
Target Start/End: Original strand, 47080360 - 47080470
Alignment:
Q  456 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 555  Q
    |||||||||||   ||| || |||| ||| |||| |||||||| ||||||||||||  |  || ||||||||| ||   ||||||||||||||||| |||    
T  47080360 tctccatttataaatttctccatttgttctatttagagagatagagacacataaaaagtaaaaaaaaataaaaaat---taatgatggtgggacccgctt 47080456  T
Q  556 agtggtaggaccca 569  Q
    |||| |||||||||    
T  47080457 agtgataggaccca 47080470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 566
Target Start/End: Complemental strand, 11828991 - 11828945
Alignment:
Q  520 aaaataaaatataactaatgatggtgggacccacttagtggtaggac 566  Q
    ||||||||| |||| |||||||||||| ||||||||| |||||||||    
T  11828991 aaaataaaaaataattaatgatggtggaacccacttaatggtaggac 11828945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 573
Target Start/End: Complemental strand, 19027751 - 19027713
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccaccat 573  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  19027751 taatgatggtgggatccacttagtgataggacccaccat 19027713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 535 - 573
Target Start/End: Original strand, 20726885 - 20726923
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccaccat 573  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  20726885 taatgatggtgggatccacttagtgataggacccaccat 20726923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Original strand, 4269187 - 4269224
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4269187 taatgatggtgggatccacttagtgataggacccacca 4269224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 511
Target Start/End: Complemental strand, 6568460 - 6568419
Alignment:
Q  470 tttatcaatttcttccatttggagagataaagacacataaaa 511  Q
    |||||| |||||| ||||||||||||||||||||||| ||||    
T  6568460 tttatccatttctaccatttggagagataaagacacacaaaa 6568419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Complemental strand, 14696825 - 14696788
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  14696825 taatgatggtgggatccacttagtgataggacccacca 14696788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Original strand, 30102501 - 30102538
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  30102501 taatgatggtgggatccacttagtgataggacccacca 30102538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 130; Significance: 7e-67; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 130; E-Value: 7e-67
Query Start/End: Original strand, 451 - 649
Target Start/End: Original strand, 4804372 - 4804568
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  4804372 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 4804471  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    ||||||||||||||||||||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  4804472 cacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatcttcacccc 4804568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 444 - 647
Target Start/End: Complemental strand, 1249304 - 1249105
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 543  Q
    |||| |||||||||||||||||||||||| || |||||||| ||||||| ||||||||||||||||||||||||| ||| |||||||||| |||||||||    
T  1249304 gggttaagatcctctccatttatgtgtttctccatttcttcaatttggaaagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatgg 1249205  T
Q  544 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 643  Q
    |||||||||||||||||||||||||||||||||         ||||| ||||||||||||||  ||| ||||||||||||||||||||||| ||||||||    
T  1249204 tgggacccacttagtggtaggacccaccatctattttt----tgtctgtctctctccaacttacaaaactccatttattttgccaaatggagaggatctt 1249109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 444 - 645
Target Start/End: Original strand, 27826455 - 27826654
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 543  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||  ||  | |||||||||||||| |||||||||    
T  27826455 gggtgaagatcctctccatttatgtgtttctcaatttcttccattttgagagataaagacacataaaaaattttaaaaaataaaatataattaatgatgg 27826554  T
Q  544 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 643  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||| | |||| |||||| || ||||||| ||||||||| ||||||||    
T  27826555 tgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctcaaccttgcaaatcttcagttattttaccaaatggagaggatctt 27826652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 451 - 648
Target Start/End: Original strand, 7162008 - 7162203
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||||| ||||| |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  7162008 gatcctctctatttacgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 7162107  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||| |||||||||||||||||        |||||||||||||||||||||| ||| |||||||||||||  |||||||| | |||||||||||    
T  7162108 cacttagtagtaggacccaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 7162203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 8e-48
Query Start/End: Original strand, 451 - 650
Target Start/End: Complemental strand, 21159516 - 21159323
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||| |||||||||    | |||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  21159516 gatcctctccgtttatgtgt----ccatttcttcaatttggagatataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 21159421  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 650  Q
    ||||||||||||||||||||||||||        |||||||| ||||||||||||| ||| || ||||||||||  |||||||| |||||||||||||||    
T  21159420 cacttagtggtaggacccaccatcta--ttttttgtgtctatttctctccaacttgcaaaacttcatttattttaacaaatggagaggatcttcacccca 21159323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 467 - 649
Target Start/End: Original strand, 17944102 - 17944282
Alignment:
Q  467 gtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggac 566  Q
    |||||| || |||||||| ||||||||||||||| ||||||||||||||| | ||| |||||||||| |||||||||||||||||| |||||||||||||    
T  17944102 gtgtttctccatttcttcaatttggagagataaaaacacataaaatcttggaaaaagtaaaatataattaatgatggtgggacccatttagtggtaggac 17944201  T
Q  567 ccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    | ||||||||        |||||||||||||||||||||  ||| ||||||||||||||||||||| | ||||||||||||||    
T  17944202 ctaccatcta--ttttttgtgtctatctctctccaacttacaaaactccatttattttgccaaatgaagaggatcttcacccc 17944282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 477 - 648
Target Start/End: Original strand, 12412587 - 12412756
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 576  Q
    |||||||| ||||||||||||||| | ||||||||| ||||| ||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  12412587 atttcttcaatttggagagataaaaatacataaaattttgaaaaaagtaaaatataattaatgatggtggaacccacttagtggtaggacccaccatcta 12412686  T
Q  577 nnnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
            |||||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||| ||||    
T  12412687 --tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaagatctttaccc 12412756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 451 - 576
Target Start/End: Original strand, 29698087 - 29698212
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  29698087 gatcctctccatttatgtgtttctccatttcttcaatttggagaaataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 29698186  T
Q  551 cacttagtggtaggacccaccatcta 576  Q
    |||||| |||||||| ||||||||||    
T  29698187 cacttaatggtaggatccaccatcta 29698212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 502 - 648
Target Start/End: Complemental strand, 13089849 - 13089705
Alignment:
Q  502 acacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctcca 601  Q
    ||||||||||| ||||| |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||        |||||||||||||||||    
T  13089849 acacataaaattttgaaaaaaataaaatataattaatgatggtggggcccacttagtggtaggacccaccatcta--tattttgtgtctatctctctcca 13089752  T
Q  602 acttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||| ||| | ||||||||||||||||||||| |||||||||||||    
T  13089751 acttgcaaaacaccatttattttgccaaatggagaggatcttcaccc 13089705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 451 - 553
Target Start/End: Original strand, 32737798 - 32737900
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||||| |||    
T  32737798 gatcctctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtggaacc 32737897  T
Q  551 cac 553  Q
    |||    
T  32737898 cac 32737900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 452 - 645
Target Start/End: Complemental strand, 227714 - 227522
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    ||||||| |||||||||| || || |||||| | ||||||||||||| ||||||| ||| | ||||| ||  ||||| ||||  ||||||| ||||| ||    
T  227714 atcctcttcatttatgtgcttctccatttctacaatttggagagatatagacacacaaagttttgaaaaaggtaaaaaataatcaatgatgatgggatcc 227615  T
Q  552 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 645  Q
    |||||||||||||||||||||||||        ||||||||||||||||||  || ||| |||||||||||||  |||||||| ||||||||||    
T  227614 acttagtggtaggacccaccatcta-ttcttttgtgtctatctctctccaaaatgcaaaactccatttattttagcaaatggagaggatcttca 227522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 477 - 565
Target Start/End: Original strand, 30460770 - 30460858
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtagga 565  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||| | || ||||| || ||| ||||||||    
T  30460770 atttcttctatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaataacggcgggactcatttaatggtagga 30460858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 585 - 648
Target Start/End: Original strand, 32737913 - 32737976
Alignment:
Q  585 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||||| || ||| ||| ||||||||||||||||||| |||||||||||||    
T  32737913 gtgtctatctctctccaacctgcaaaactctatttattttgccaaatggagaggatcttcaccc 32737976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 483 - 650
Target Start/End: Complemental strand, 2800730 - 2800565
Alignment:
Q  483 tccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnn 582  Q
    |||||||||||||||| | || || ||||  ||||| ||| ||||| ||||  ||||||||||||||||||||| ||||| || |||| |||||          
T  2800730 tccatttggagagatataaactcaaaaaaaattgaaaaaagtaaaaaataatcaatgatggtgggacccacttaatggtatgatccactatcta--tttt 2800633  T
Q  583 nngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 650  Q
      |||||||||||||||||| ||||  || |||||| |||||  |||||||| |||||| | ||||||    
T  2800632 atgtgtctatctctctccaaattgtgtatttccattaattttatcaaatggagaggatcctaacccca 2800565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 478 - 523
Target Start/End: Complemental strand, 17398818 - 17398773
Alignment:
Q  478 tttcttccatttggagagataaagacacataaaatcttgaacaaaa 523  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||    
T  17398818 tttcctccatttggagagataaagacacataaaatcttgaaaaaaa 17398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 553
Target Start/End: Complemental strand, 1516314 - 1516238
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 553  Q
    ||||||| |||||| | ||||||| ||||||||||| || || ||| |||||||||| |||||||||||||| ||||    
T  1516314 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1516238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 553
Target Start/End: Complemental strand, 1518403 - 1518327
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 553  Q
    ||||||| |||||| | ||||||| ||||||||||| || || ||| |||||||||| |||||||||||||| ||||    
T  1518403 atttctttcatttgaaaagataaatacacataaaattttaaaaaaagtaaaatataattaatgatggtgggatccac 1518327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 524 - 572
Target Start/End: Original strand, 24484876 - 24484924
Alignment:
Q  524 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 572  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||||||    
T  24484876 taaaaaataattaatgatggtgggacccacttagtgataggacccacca 24484924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 648
Target Start/End: Complemental strand, 1516219 - 1516163
Alignment:
Q  591 atctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||| |||||||| ||||    
T  1516219 atctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaaccc 1516163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 648
Target Start/End: Complemental strand, 1518308 - 1518252
Alignment:
Q  591 atctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||| |||||||| ||||    
T  1518308 atctctctccaaattgcaaa-ctccatttattttgccaaatggataggatcttaaccc 1518252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 520 - 565
Target Start/End: Original strand, 2720366 - 2720411
Alignment:
Q  520 aaaataaaatataactaatgatggtgggacccacttagtggtagga 565  Q
    |||||| || |||| |||||||||||||||||||||||||||||||    
T  2720366 aaaatataaaataattaatgatggtgggacccacttagtggtagga 2720411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 535 - 640
Target Start/End: Complemental strand, 7215919 - 7215816
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatgga 634  Q
    ||||||| |||||||||| ||||||||||||||||| |||||        |||||||||||||||||| ||||  |  ||||||||||||  ||||||||    
T  7215919 taatgatagtgggacccaattagtggtaggacccactatcta--ttttatgtgtctatctctctccaaattgtgcacttccatttattttatcaaatgga 7215822  T
Q  635 caggat 640  Q
     |||||    
T  7215821 gaggat 7215816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 648
Target Start/End: Complemental strand, 1515554 - 1515498
Alignment:
Q  591 atctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||||||| ||| ||| |||||||||||||||||||| || |||||||| ||||    
T  1515554 atctctctccaaattgcaaa-ctccatttattttgccaaattgataggatcttaaccc 1515498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Complemental strand, 7098263 - 7098226
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  7098263 taatgatggtgggatccacttagtgataggacccacca 7098226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 477 - 570
Target Start/End: Original strand, 17275921 - 17276014
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccac 570  Q
    |||| ||| |||||||||||||||||  ||||||||||| || ||||||||| |||| |||  || ||||| | ||  ||||||| ||||||||    
T  17275921 atttattctatttggagagataaagatgcataaaatcttaaaaaaaataaaaaataattaactatagtggggctcatatagtggtgggacccac 17276014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 1e-65; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 1e-65
Query Start/End: Original strand, 444 - 648
Target Start/End: Complemental strand, 19902076 - 19901874
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 543  Q
    |||| |||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||||    
T  19902076 gggttaagatcctctccatttatgtgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatgg 19901977  T
Q  544 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 643  Q
    |||||||||||||||||||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||| ||||||||| ||||||||    
T  19901976 tgggacccacttagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttaccaaatggagaggatctt 19901879  T
Q  644 caccc 648  Q
    |||||    
T  19901878 caccc 19901874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 444 - 648
Target Start/End: Original strand, 24073534 - 24073735
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 543  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||| |||| || |||||| |||||||||    
T  24073534 gggtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagatgaaggcacataaaatcttgaa-aaaaaaatatataattaatgatgg 24073632  T
Q  544 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 643  Q
     ||||||||||||||||||||||||||||||||        |||||||||||||||||||||  ||||||||||||||||||||||||||  ||||||||    
T  24073633 cgggacccacttagtggtaggacccaccatcta--tttgttgtgtctatctctctccaacttacaaatctccatttattttgccaaatggggaggatctt 24073730  T
Q  644 caccc 648  Q
    |||||    
T  24073731 caccc 24073735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 451 - 649
Target Start/End: Original strand, 56558203 - 56558399
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  56558203 gatcctctccatttatatgtttctctatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 56558302  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    ||||||||| ||||||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  56558303 cacttagtgataggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 56558399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 452 - 647
Target Start/End: Original strand, 34778346 - 34778539
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    ||||||||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  34778346 atcctctccatttatgtgtttctccatttcttcaatgtggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggaccc 34778445  T
Q  552 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacc 647  Q
    |||||||||||||| ||||||||||        |||||||||||||| ||||||| ||| ||||||||||||||||||||||| ||||||||||||    
T  34778446 acttagtggtaggatccaccatcta--ttttttgtgtctatctctcttcaacttgcaaaactccatttattttgccaaatggagaggatcttcacc 34778539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 451 - 649
Target Start/End: Complemental strand, 5763313 - 5763117
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||| ||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||    
T  5763313 gatcatctccatttatatgtttctccatttcttcaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgatggtgggacc 5763214  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    ||||||||||||||||||||||||||        || ||||||||||||||||||||||| |||||| ||||||||||||| || ||||||||||||||    
T  5763213 cacttagtggtaggacccaccatcta--ttttttgtttctatctctctccaacttgtaaaactccatatattttgccaaattgagaggatcttcacccc 5763117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 451 - 648
Target Start/End: Complemental strand, 33247279 - 33247086
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||  ||| |||||||||||||| |||||||||||| |||    
T  33247279 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatc--gaaaaaaataaaatataattaatgatggtggaacc 33247182  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    || |||||||||| ||||||||||||        |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  33247181 catttagtggtagaacccaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 33247086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 444 - 648
Target Start/End: Original strand, 23610559 - 23610761
Alignment:
Q  444 gggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatgg 543  Q
    |||| |||||||||||||||||| ||||| || |||||||| ||||||||||||||||| ||||||||||||||| ||| |||||||||  |||||||||    
T  23610559 gggttaagatcctctccatttatatgtttctccatttcttcaatttggagagataaagatacataaaatcttgaaaaaagtaaaatatatttaatgatgg 23610658  T
Q  544 tgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatctt 643  Q
    ||||||||||||||||||| |||||||||||||        |||||||||||||||||||||| ||| |||||||||||||  |||||||| ||||||||    
T  23610659 tgggacccacttagtggtatgacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagaggatctt 23610756  T
Q  644 caccc 648  Q
    |||||    
T  23610757 caccc 23610761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 463 - 648
Target Start/End: Complemental strand, 3952309 - 3952126
Alignment:
Q  463 ttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggta 562  Q
    |||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| ||||||||||||||||    
T  3952309 ttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgagacccacttagtggta 3952210  T
Q  563 ggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||         |||||||||||||||||||||  || ||||||||||||||||||||||| |||||||||||||    
T  3952209 ggacccaccatctattttttt--tgtctatctctctccaacttgccaaactccatttattttgccaaatggagaggatcttcaccc 3952126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 451 - 648
Target Start/End: Complemental strand, 18207191 - 18206996
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| ||  |||||||||| |||||||| |||||||    
T  18207191 gatcctctccatttatgtgtttctcaatttcttcaatttggaaagataaagacacataaaatcttgaaaaaggtaaaatataattaatgatgatgggacc 18207092  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||||||||||||         |||||||||||||| |||||| ||| || ||||||||||| |||||||| |||||||||||||    
T  18207091 cacttagtggtaggacccaccatctattttttt--tgtctatctctctctaacttgcaaaactacatttattttgtcaaatggagaggatcttcaccc 18206996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 452 - 648
Target Start/End: Complemental strand, 5416617 - 5416422
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa--taaaatataactaatgatggtgggac 549  Q
    |||||||| |||||||||||| || |||||||| ||||||| |||||||||||||||||||||| || ||||  |||||||||| |||||||||||||||    
T  5416617 atcctctcaatttatgtgtttctccatttcttcaatttggacagataaagacacataaaatctttaaaaaaaagtaaaatataattaatgatggtgggac 5416518  T
Q  550 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||||||| |||||        |||||||||||||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  5416517 ccacttagtggtaggacccacaatcta---tttttgtgtctatctctctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 5416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 449 - 649
Target Start/End: Complemental strand, 38079873 - 38079675
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    ||||||||||||||||||| |||| || |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||| |    
T  38079873 aagatcctctccatttatgcgtttctccattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtggaa 38079774  T
Q  549 cccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
     ||||||||| |||||||||||||||||        ||||||||||||||| |||| | ||| ||||||||||||||  ||||||| |||||||||||||    
T  38079773 tccacttagtagtaggacccaccatcta--tttcttgtgtctatctctctcaaactagcaaaactccatttattttgttaaatggagaggatcttcaccc 38079676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 451 - 570
Target Start/End: Complemental strand, 12241559 - 12241440
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||| ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  12241559 gatcctcttcatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 12241460  T
Q  551 cacttagtggtaggacccac 570  Q
    ||||||||||||||||||||    
T  12241459 cacttagtggtaggacccac 12241440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 455 - 648
Target Start/End: Complemental strand, 33262699 - 33262508
Alignment:
Q  455 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccact 554  Q
    |||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||| || || ||| |||||||||| |||||||||||||||| | |    
T  33262699 ctctccatttatgtatttttctatttcttcaatttggagagataaagacacataaaattttaaaaaaagtaaaatataattaatgatggtgggacctatt 33262600  T
Q  555 tagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||| ||||||||||        ||||||||||||||| |||||| ||| | | |||||||||||||||| || |||||||||||||    
T  33262599 tagtggtaggatccaccatcta--ttttttgtgtctatctctctctaacttgcaaaacacaatttattttgccaaatagagaggatcttcaccc 33262508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 451 - 648
Target Start/End: Original strand, 39862441 - 39862636
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||||||| ||     
T  39862441 gatcctcttcatttatgtgtttctcattttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatggtggaact 39862540  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    || |||||| |||||| |||||||||        ||||||||||||||| |||||| |||  || |||||||||  |||||||| |||||||||||||    
T  39862541 catttagtgataggacacaccatcta--ttttttgtgtctatctctctcaaacttgcaaaattctatttattttatcaaatggagaggatcttcaccc 39862636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 451 - 553
Target Start/End: Original strand, 12153095 - 12153197
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  12153095 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 12153194  T
Q  551 cac 553  Q
    |||    
T  12153195 cac 12153197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 494 - 634
Target Start/End: Original strand, 30567868 - 30568006
Alignment:
Q  494 agataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatc 593  Q
    ||||||||||||||||||| ||||| ||| |||||||||| |||||||| ||| |||||||||||||||||||||||||||||        |||||||||    
T  30567868 agataaagacacataaaattttgaaaaaagtaaaatataattaatgatgatggaacccacttagtggtaggacccaccatcta--ttttttgtgtctatc 30567965  T
Q  594 tctctccaacttgtaaatctccatttattttgccaaatgga 634  Q
    ||||| ||||||| ||| |||||||||||||||||||||||    
T  30567966 tctcttcaacttgcaaaactccatttattttgccaaatgga 30568006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 506 - 648
Target Start/End: Complemental strand, 12312572 - 12312431
Alignment:
Q  506 ataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaactt 605  Q
    |||||||||| || ||| |||||||||| |||||||| |||||||||||||||||||||| ||||||||||         ||||||||||||||||||||    
T  12312572 ataaaatcttaaagaaagtaaaatataattaatgatgatgggacccacttagtggtaggatccaccatctatttttttt-tgtctatctctctccaactt 12312474  T
Q  606 gtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    | ||| ||||||||||||||||||||||| |||||||||||||    
T  12312473 gcaaaactccatttattttgccaaatggagaggatcttcaccc 12312431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 451 - 576
Target Start/End: Complemental strand, 47922226 - 47922101
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||||| |||||||||||| || |||||||| |||| ||||||||||||||| |||||| ||||| |||||||||||||  |||||||||||| |||    
T  47922226 gatcctctcaatttatgtgtttctccatttcttcaatttagagagataaagacacgtaaaatattgaaaaaaataaaatatatttaatgatggtggaacc 47922127  T
Q  551 cacttagtggtaggacccaccatcta 576  Q
    |||||||||||| ||||||| |||||    
T  47922126 cacttagtggtaagacccactatcta 47922101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 451 - 539
Target Start/End: Original strand, 52018707 - 52018795
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatg 539  Q
    |||||||||||||||||||||| || |||||||| ||||||||||||||| ||||||||||||||||| ||| |||||||||| |||||    
T  52018707 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaaaacacataaaatcttgaaaaaagtaaaatataattaatg 52018795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 443 - 643
Target Start/End: Complemental strand, 47922526 - 47922327
Alignment:
Q  443 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 542  Q
    ||||| || ||||||||||||||| | |||||| |||||| ||||||| || |||| | ||||| ||| | ||||| ||| ||||| |||| ||  ||||    
T  47922526 cgggtcaaaatcctctccatttatttctttatccatttctaccatttgtagtgatataaacacacaaagttttgaaaaaagtaaaaaataattatagatg 47922427  T
Q  543 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 642  Q
     |||||||||||||||||||||||||||||||||        |||||||| ||||||||| ||| ||| ||| |||||||||  |||||||| |||||||    
T  47922426 atgggacccacttagtggtaggacccaccatcta-ttcttttgtgtctatatctctccaaattgcaaaactcaatttattttagcaaatggagaggatct 47922328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 452 - 576
Target Start/End: Complemental strand, 31862370 - 31862246
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||| |||||| |  || || |||||| ||||||||||||||| ||||||| ||||| ||  | ||| ||||| |||| |||||||||||||||||    
T  31862370 atcctctcaatttatatccttctctatttctaccatttggagagatatagacacacaaaattttagaaaaagtaaaaaataattaatgatggtgggaccc 31862271  T
Q  552 acttagtggtaggacccaccatcta 576  Q
    |||||||||||||| ||||||||||    
T  31862270 acttagtggtaggatccaccatcta 31862246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 451 - 545
Target Start/End: Complemental strand, 17080791 - 17080697
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtg 545  Q
    ||||| |||||||||||||||| || |||||||| ||||||||||||||||||| ||||||||||| | ||| ||||||||||  ||||||||||    
T  17080791 gatcccctccatttatgtgtttctccatttcttcaatttggagagataaagacagataaaatcttggaaaaagtaaaatataatgaatgatggtg 17080697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 585 - 648
Target Start/End: Original strand, 12153210 - 12153273
Alignment:
Q  585 gtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||    
T  12153210 gtgtctatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcaccc 12153273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 455 - 533
Target Start/End: Complemental strand, 12312650 - 12312572
Alignment:
Q  455 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataa 533  Q
    |||||||||||||||||| || |||||||| |||| |||||||||||||||||||||| ||||| ||| ||||||||||    
T  12312650 ctctccatttatgtgtttctccatttcttcaatttagagagataaagacacataaaattttgaaaaaagtaaaatataa 12312572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 588 - 648
Target Start/End: Original strand, 33524321 - 33524381
Alignment:
Q  588 tctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||    
T  33524321 tctatctctctccaacttccaaatctccatttattttgccaaatggagaggatcttcaccc 33524381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 449 - 576
Target Start/End: Complemental strand, 25442328 - 25442200
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaa-ataaaatataactaatgatggtggg 547  Q
    |||||||||||||||||||   || || |||||||||||||||||||||||||||||| | |||  | || |||  ||||| |||| |||||  |||| |    
T  25442328 aagatcctctccatttatggccttctccatttcttccatttggagagataaagacacacacaattataaaaaaagttaaaaaataattaatgtcggtgag 25442229  T
Q  548 acccacttagtggtaggacccaccatcta 576  Q
    | ||||||||||||||||||||| |||||    
T  25442228 atccacttagtggtaggacccacaatcta 25442200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 588 - 648
Target Start/End: Original strand, 52018822 - 52018882
Alignment:
Q  588 tctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||||| ||| ||||||||||||||| ||||||| |||||||||||||    
T  52018822 tctatctctctccaacttgcaaaactccatttattttgctaaatggagaggatcttcaccc 52018882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 452 - 572
Target Start/End: Complemental strand, 56269217 - 56269106
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||  |          |||| |||| |||||||||||||||||    
T  56269217 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaaagta---------aaaaaataattaatgatggtgggaccc 56269127  T
Q  552 acttagtggtaggacccacca 572  Q
    |||||||||||||||||||||    
T  56269126 acttagtggtaggacccacca 56269106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 486 - 641
Target Start/End: Original strand, 1871237 - 1871388
Alignment:
Q  486 atttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctannnnnnnng 585  Q
    ||||||||||||||||||||| | ||  ||||| |||||| || |||| |||||||| ||||||||||||||| |||||| |||| |||||             
T  1871237 atttggagagataaagacacaaagaaatttgaa-aaaatataaaataattaatgatgatgggacccacttagtagtaggatccactatctatattttt-- 1871333  T
Q  586 tgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    ||||||||||||||||| ||| | | |||||||||||||| ||||| || ||||||    
T  1871334 tgtctatctctctccaaattgcata-ctccatttattttgtcaaattgagaggatc 1871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 442 - 572
Target Start/End: Original strand, 5524372 - 5524492
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    |||||| || |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||    
T  5524372 acgggtcaatatcctctccatttataaatttttccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgat 5524461  T
Q  542 ggtgggacccacttagtggtaggacccacca 572  Q
    ||||||||||||||| || ||||||||||||    
T  5524462 ggtgggacccacttactgataggacccacca 5524492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 478 - 650
Target Start/End: Original strand, 23474062 - 23474231
Alignment:
Q  478 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatctan 577  Q
    |||| |||||||||||||||| | ||||| ||||  || || ||| |||||  ||| ||||||||||||||  |||| | | |||||||||||||||||     
T  23474062 tttcatccatttggagagatataaacacacaaaaaattcaaaaaattaaaaagtaattaatgatggtgggattcactcaatagtaggacccaccatcta- 23474160  T
Q  578 nnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 650  Q
           ||||||||||||| |||| ||| | | ||||||||||| ||| ||||||| |||||||| ||||||    
T  23474161 -ttttatgtgtctatctctccccaaattgcata-ctccatttattatgctaaatggagaggatctttacccca 23474231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 477 - 552
Target Start/End: Complemental strand, 33841929 - 33841854
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccca 552  Q
    ||||| |||||||||| ||||||||||||| ||||||||||| | | || |  |||| ||||||||||||||||||    
T  33841929 atttcctccatttggaaagataaagacacaaaaaatcttgaaaagagtatacaataattaatgatggtgggaccca 33841854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 452 - 572
Target Start/End: Complemental strand, 37002391 - 37002281
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||          ||| ||||| |||| |||||||||||||||||    
T  37002391 atcctctccatttataaatttctccatttgttccatttagagagataaagacacataa----------aaagtaaaaaataattaatgatggtgggaccc 37002302  T
Q  552 acttagtggtaggacccacca 572  Q
    |||||||  ||||| ||||||    
T  37002301 acttagtaataggatccacca 37002281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 524 - 572
Target Start/End: Complemental strand, 48084603 - 48084555
Alignment:
Q  524 taaaatataactaatgatggtgggacccacttagtggtaggacccacca 572  Q
    ||||| |||| ||||||||||||||||||||||||| ||| ||||||||    
T  48084603 taaaaaataattaatgatggtgggacccacttagtgctagaacccacca 48084555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 486 - 544
Target Start/End: Complemental strand, 43447697 - 43447638
Alignment:
Q  486 atttggagagataaagacacat-aaaatcttgaacaaaataaaatataactaatgatggt 544  Q
    |||| ||||||||||||||||| ||||| ||||| ||| |||||||||| ||||||||||    
T  43447697 atttcgagagataaagacacataaaaattttgaaaaaagtaaaatataattaatgatggt 43447638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 569
Target Start/End: Original strand, 3326438 - 3326559
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagat-aaagacacataaaatcttgaacaaaataaaatataactaatgatggtggg 547  Q
    ||||||||||||||||||||  |  || |||||||  |||| ||||||| ||||||| | ||| | ||||| ||| ||||| |||| |||| |||||||     
T  3326438 aagatcctctccatttatgtcctcctccatttctttaattttgagagataaaagacaaaaaaagttttgaaaaaagtaaaaaataattaataatggtgga 3326537  T
Q  548 acccacttagtggtaggaccca 569  Q
    ||||| ||| ||||| ||||||    
T  3326538 acccatttaatggtatgaccca 3326559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Original strand, 25219003 - 25219040
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  25219003 taatgatggtgggatccacttagtgataggacccacca 25219040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Original strand, 32146510 - 32146547
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  32146510 taatgatggtgggatccacttagtgataggacccacca 32146547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Original strand, 46238974 - 46239011
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  46238974 taatgatggtgggatccacttagtgataggacccacca 46239011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Original strand, 53526096 - 53526133
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  53526096 taatgatggtgggatccacttagtgataggacccacca 53526133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Complemental strand, 55160438 - 55160401
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  55160438 taatgatggtgggatccacttagtgataggacccacca 55160401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 122; Significance: 4e-62; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 451 - 649
Target Start/End: Original strand, 207987 - 208183
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || ||| |||||||||| |||||||| |||||||    
T  207987 gatcctctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaagtaaaatataattaatgatgatgggacc 208086  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccc 649  Q
    ||||||||||||||||||||||||||        |||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  208087 cacttagtggtaggacccaccatcta--ttttttgtgtttatctctctccaacttgcaaaactccatttattttgccaaatggagaggatcttcacccc 208183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 9e-57; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 451 - 648
Target Start/End: Complemental strand, 43720098 - 43719903
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||| ||||||||||||||||| || |||||||| |||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||    
T  43720098 gatcttctccatttatgtgtttctccatttcttcaatttggagagataaagacacataaaatcttaaaaaaaataaaatataattaatgatggtgggacc 43719999  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||||||||||||||| || ||        |||||||||||||||||||||| ||| ||||||||||||||  ||||||| |||||||||||||    
T  43719998 cacttagtggtaggacccacaattta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgttaaatggagaggatcttcaccc 43719903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 444 - 648
Target Start/End: Complemental strand, 19830591 - 19830387
Alignment:
Q  444 gggtgaagatcctctccattt-atgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgat 541  Q
    |||| |||||||||||||||| |||||||| || |||||||| |||||||||||||||||||||||||||||| || |||  |||||||||| |||||||    
T  19830591 gggttaagatcctctccattttatgtgtttttccatttcttcaatttggagagataaagacacataaaatctttaaaaaaggtaaaatataattaatgat 19830492  T
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    ||||||||||||||| |||||||||||||||||||        |||||||| |||| |||||||| ||| ||||||||||||||||||||||| ||||||    
T  19830491 ggtgggacccacttaatggtaggacccaccatcta--ttttttgtgtctatttctccccaacttgcaaaactccatttattttgccaaatggagaggatc 19830394  T
Q  642 ttcaccc 648  Q
    |||||||    
T  19830393 ttcaccc 19830387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 442 - 648
Target Start/End: Original strand, 2229898 - 2230102
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    |||||| | |||||||| ||||||||||||| || |||||||  ||||||||||||||||||||||||||| ||||| ||| |||||||||| |||||||    
T  2229898 acgggttaggatcctcttcatttatgtgtttctctatttctttaatttggagagataaagacacataaaattttgaaaaaagtaaaatataattaatgat 2229997  T
Q  542 ggtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatc 641  Q
    ||||| | |||||||||||||||||||| ||||||        |||||||||||||||||||||| ||| ||||| ||||||||||||||||| |||||     
T  2229998 ggtggaaaccacttagtggtaggacccatcatcta--ttttttgtgtctatctctctccaacttgcaaaactccaattattttgccaaatggagaggatg 2230095  T
Q  642 ttcaccc 648  Q
    |||||||    
T  2230096 ttcaccc 2230102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 467 - 648
Target Start/End: Original strand, 27033591 - 27033770
Alignment:
Q  467 gtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggac 566  Q
    |||||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||    
T  27033591 gtgtttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggatccacttagtggtaggac 27033690  T
Q  567 ccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||        |||||||||||||||||||||| ||| |||||||||||||  |||||||| | |||||||||||    
T  27033691 ccaccatcta--tttcttgtgtctatctctctccaacttgcaaaactccatttattttatcaaatggagatgatcttcaccc 27033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 451 - 648
Target Start/End: Original strand, 34373755 - 34373950
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||||||||  |||||||| |  |||| ||| ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  34373755 gatcctctccatcaatgtgtttcttcattttttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacc 34373854  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
     | |||||||||||||||||||||||        |||||||||||||||||||||| ||| | | ||||||||||||||||||| || ||||||||||    
T  34373855 taattagtggtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaacacaatttattttgccaaatggagagaatcttcaccc 34373950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 451 - 646
Target Start/End: Original strand, 40851697 - 40851891
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatat-aactaatgatggtgggac 549  Q
    |||||||||||||||||| ||| || |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||| |  |||||||||| ||||    
T  40851697 gatcctctccatttatgtatttctccatttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatatgatttaatgatggtaggac 40851796  T
Q  550 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcac 646  Q
    |||||||||||| | ||||||||||||        |||||||||| ||||||||||| ||| |||||||||||||| ||||| || |||||||||||    
T  40851797 ccacttagtggttgaacccaccatcta--ttttttgtgtctatctttctccaacttgcaaaactccatttattttgtcaaattgagaggatcttcac 40851891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 456 - 630
Target Start/End: Complemental strand, 34373731 - 34373559
Alignment:
Q  456 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 555  Q
    ||||||||||||||||| || |||||||| ||||||||||||||||| ||| ||||||||||| ||| |||||||||| |||||||||||||||||||||    
T  34373731 tctccatttatgtgtttctccatttcttcaatttggagagataaagagacaaaaaatcttgaaaaaagtaaaatataattaatgatggtgggacccactt 34373632  T
Q  556 agtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaa 630  Q
    |||||||||||||||||||||        |||||||||||| |  |||||| ||| ||| |||||||||||||||    
T  34373631 agtggtaggacccaccatcta--tttttagtgtctatctctatggaacttgcaaaactctatttattttgccaaa 34373559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 456 - 645
Target Start/End: Original strand, 46167322 - 46167509
Alignment:
Q  456 tctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccactt 555  Q
    ||||||||||||||||| || |||||||| |||| |||||||||||||| ||| ||||||||| ||| |||||||||| |||| ||||| ||| ||||||    
T  46167322 tctccatttatgtgtttttccatttcttcaatttagagagataaagacaaatataatcttgaaaaaagtaaaatataattaataatggtaggatccactt 46167421  T
Q  556 agtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 645  Q
    |||||||||||||||||| ||        |||||||||||||||||||||  ||| ||||||||||||||| ||||||| ||||| ||||    
T  46167422 agtggtaggacccaccatata--ttttttgtgtctatctctctccaacttacaaaactccatttattttgctaaatggagaggatgttca 46167509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 452 - 648
Target Start/End: Original strand, 48084744 - 48084939
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||||||||||||  || || |||||| ||||||||||||||| ||||||| ||||| ||||| ||||||||| |||| |||||||| ||||||||    
T  48084744 atcctctccatttatgtccttctccatttctaccatttggagagatatagacacacaaaattttgaaaaaaataaaaaataattaatgatgatgggaccc 48084843  T
Q  552 acttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    |||||||||| ||||||||||||||        ||||||||||||| |||| ||| ||| ||| |||||||||  |||||||| |||||||| ||||    
T  48084844 acttagtggttggacccaccatcta-ttcttttgtgtctatctctccccaaattgcaaaactcaatttattttagcaaatggagaggatcttaaccc 48084939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 449 - 576
Target Start/End: Complemental strand, 550969 - 550842
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    |||||||||||||||||||| ||| || |||||||||||||||||||||||||| ||||||||| || || ||| |||||||||| |||| |||||||||    
T  550969 aagatcctctccatttatgtctttctccatttcttccatttggagagataaagatacataaaatttttaaaaaagtaaaatataaataataatggtggga 550870  T
Q  549 cccacttagtggtaggacccaccatcta 576  Q
    |||||||| || ||||| ||||||||||    
T  550869 cccacttaatgataggatccaccatcta 550842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 543 - 648
Target Start/End: Original strand, 24754673 - 24754776
Alignment:
Q  543 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 642  Q
    ||||||||||||||||||||||||  ||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  24754673 gtgggacccacttagtggtaggacataccatctattttgt--gtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatct 24754770  T
Q  643 tcaccc 648  Q
    ||||||    
T  24754771 tcaccc 24754776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 543 - 648
Target Start/End: Original strand, 24763670 - 24763773
Alignment:
Q  543 gtgggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatct 642  Q
    ||||||||||||||||||||||||  ||||||||        |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||    
T  24763670 gtgggacccacttagtggtaggacataccatctattttgt--gtgtctatctctctccaacttgtaaaactccatttattttgccaaatggagaggatct 24763767  T
Q  643 tcaccc 648  Q
    ||||||    
T  24763768 tcaccc 24763773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 455 - 576
Target Start/End: Original strand, 12402893 - 12403015
Alignment:
Q  455 ctctccatttatgtgtttat-caatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggaccca 552  Q
    |||||||||||||||||| | || ||||||  |||||||||||||||||||||||||||||| || |||| |||||||||| |||| |||||||||| ||    
T  12402893 ctctccatttatgtgtttcttcattttctta-atttggagagataaagacacataaaatcttaaaaaaaagtaaaatataattaataatggtgggactca 12402991  T
Q  553 cttagtggtaggacccaccatcta 576  Q
    ||||||||||| | ||||||||||    
T  12402992 cttagtggtagaatccaccatcta 12403015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 454 - 632
Target Start/End: Complemental strand, 566925 - 566746
Alignment:
Q  454 cctctccatttatgtgtttatc----aatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggac 549  Q
    ||||| ||||||||| ||||||    ||||||||||||||||||||||||| | ||||||||||||||| ||| |||||||||| |||| | ||||||||    
T  566925 cctcttcatttatgtctttatccattaatttcttccatttggagagataaaaatacataaaatcttgaa-aaagtaaaatataaataataaaggtgggac 566827  T
Q  550 ccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatg 632  Q
    ||||||| || ||||| || |||| ||        || ||||||||||||||| ||| ||| |||||||||||||||||||||    
T  566826 ccacttaatgataggatccgccatata-tttttttgtatctatctctctccaaattgcaaa-ctccatttattttgccaaatg 566746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 452 - 576
Target Start/End: Complemental strand, 40810505 - 40810382
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaa-taaaatataactaatgatggtgggacc 550  Q
    ||||||||||||||||| ||| || ||||||  |||| ||||||||| | |||||  |||| ||||| |||| ||||| |||| |||||||| |||||||    
T  40810505 atcctctccatttatgtctttttccatttctatcattaggagagatataaacaca--aaattttgaaaaaaaataaaaaataattaatgatgatgggacc 40810408  T
Q  551 cacttagtggtaggacccaccatcta 576  Q
    |||||||||||  |||||||||||||    
T  40810407 cacttagtggttagacccaccatcta 40810382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 449 - 549
Target Start/End: Complemental strand, 52859534 - 52859433
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaa-aataaaatataactaatgatggtggg 547  Q
    ||||| |||| ||||||||| ||| || |||||| ||||||||||| ||||| |||||||||||||| || || | |||||||||| ||||||| |||||    
T  52859534 aagattctcttcatttatgtctttctccatttctaccatttggagaaataaatacacataaaatcttaaaaaagagtaaaatataattaatgattgtggg 52859435  T
Q  548 ac 549  Q
    ||    
T  52859434 ac 52859433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 443 - 572
Target Start/End: Complemental strand, 31523817 - 31523698
Alignment:
Q  443 cgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatg 542  Q
    ||||| || |||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||          | ||||| |||| ||||||||    
T  31523817 cgggtcaatatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgatg 31523728  T
Q  543 gtgggacccacttagtggtaggacccacca 572  Q
    ||||||||||||||||  ||||||||||||    
T  31523727 gtgggacccacttagtaataggacccacca 31523698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 452 - 572
Target Start/End: Original strand, 42613015 - 42613125
Alignment:
Q  452 atcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggaccc 551  Q
    |||||||||||||||   ||| || |||| ||| |||| |||||||||||||||||||||          | ||||| |||| |||||||||||||||||    
T  42613015 atcctctccatttataaatttctccatttgttctatttagagagataaagacacataaaa----------agtaaaaaataattaatgatggtgggaccc 42613104  T
Q  552 acttagtggtaggacccacca 572  Q
    |||||||| ||||||||||||    
T  42613105 acttagtgataggacccacca 42613125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 449 - 548
Target Start/End: Original strand, 2310233 - 2310330
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    |||||| |||||||||| ||| ||||  ||||||||||||| |||||||||||||||  ||||| || || ||| ||||| |||| |||||||| |||||    
T  2310233 aagatcatctccatttacgtgcttatttatttcttccatttagagagataaagacac--aaaattttaaagaaagtaaaaaataattaatgatgatggga 2310330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 648
Target Start/End: Original strand, 24647905 - 24647957
Alignment:
Q  596 tctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  24647905 tctccaacttgcaaaactccatttattttgtcaaatggagaggatcttcaccc 24647957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 449 - 511
Target Start/End: Original strand, 3009171 - 3009233
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 511  Q
    ||||||||||||||||||   ||| || |||| |||||||| |||||||||||||||||||||    
T  3009171 aagatcctctccatttataaatttctccatttgttccatttagagagataaagacacataaaa 3009233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 449 - 504
Target Start/End: Complemental strand, 567043 - 566988
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagaca 504  Q
    |||||||||| |||||||  || ||| |||||||| ||||||||||||||||||||    
T  567043 aagatcctcttcatttattagtctattaatttctttcatttggagagataaagaca 566988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 477 - 524
Target Start/End: Original strand, 32577482 - 32577528
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaat 524  Q
    |||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  32577482 atttcttctatttggagagataaagacaca-aaaatcttgaaaaaaat 32577528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 450 - 512
Target Start/End: Complemental strand, 20485870 - 20485808
Alignment:
Q  450 agatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaat 512  Q
    ||||||||||||||||  | ||| || |||||| ||||||||||||||| | |||||||||||    
T  20485870 agatcctctccatttaaatttttctccatttctaccatttggagagatataaacacataaaat 20485808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 49289104 - 49289042
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaa 511  Q
    |||||| ||| ||||||||| ||| || |||| || |||||||||| ||||||||||||||||    
T  49289104 aagatcatcttcatttatgtttttctccatttgtttcatttggagaaataaagacacataaaa 49289042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 111; Significance: 1e-55; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 446 - 648
Target Start/End: Complemental strand, 9354 - 9157
Alignment:
Q  446 gtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtg 545  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||| || |||||  ||||||| |||||||||||    
T  9354 gtgaagatcctctccatttatgtgtttctcaatttcttccatttggagagataaaggcacatgaaatctt-aaaaaaat--aatataattaatgatggtg 9258  T
Q  546 ggacccacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttca 645  Q
    | | |||||||||||| ||||||||||||||        |||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||    
T  9257 gaatccacttagtggttggacccaccatcta--ttttctgtgtctatctctctccaacttgcaaatctccatttattttgccaaatggagatgatcttca 9160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 107; Significance: 4e-53; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 451 - 650
Target Start/End: Complemental strand, 16548 - 16351
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    ||||||||| |||||||||||| || |||||||| |||||||||||||||   ||||||||||||||| |||||||||||||| |||||||| |||||||    
T  16548 gatcctctcaatttatgtgtttctccatttcttcaatttggagagataaaattacataaaatcttgaaaaaaataaaatataattaatgatgatgggacc 16449  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcacccca 650  Q
    ||||||||||||||||||||||| ||        |||||||||||||||||||||| ||| |||||||||||||||| || ||| |||||||||||||||    
T  16448 cacttagtggtaggacccaccattta--ttttttgtgtctatctctctccaacttgcaaaactccatttattttgcctaacggagaggatcttcacccca 16351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 100; Significance: 5e-49; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 451 - 648
Target Start/End: Original strand, 7071 - 7270
Alignment:
Q  451 gatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacc 550  Q
    |||||||||||||||||||||| |  |||||||| ||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||| |||    
T  7071 gatcctctccatttatgtgtttcttcatttcttcaatttgcagagataaagacatataaaatcttgaaaaaaataaaatataattaatgatggtggaacc 7170  T
Q  551 cacttagtggtaggacccaccatctannnnnnnngtgtctatctctctccaacttgtaaatctcc----atttattttgccaaatggacaggatcttcac 646  Q
    |||||| | |||||||||||||||||        |||||||||||||||||||||| ||| ||||    ||||||||||||||||||| |||||||||||    
T  7171 cacttaatagtaggacccaccatcta--ttttttgtgtctatctctctccaacttgcaaaactccatttatttattttgccaaatggagaggatcttcac 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 67; Significance: 3e-29; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 455 - 553
Target Start/End: Complemental strand, 73987 - 73889
Alignment:
Q  455 ctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 553  Q
    |||||||||||||||||| || |||||||| |||| |||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||||    
T  73987 ctctccatttatgtgtttctccatttcttcaatttagagagataaaaacacataaaatcttgaaaaaaataaaatataattaatgatgatgggacccac 73889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 587 - 644
Target Start/End: Complemental strand, 73874 - 73817
Alignment:
Q  587 gtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttc 644  Q
    |||||||||||||||||||| ||| | |||||||||||||||||| || |||||||||    
T  73874 gtctatctctctccaacttgcaaaacaccatttattttgccaaatagagaggatcttc 73817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 61; Significance: 1e-25; HSPs: 2)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 477 - 553
Target Start/End: Original strand, 13646 - 13722
Alignment:
Q  477 atttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccac 553  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  13646 atttcttcaatttggagagataaagacacataaaatcttgaaaaaagtaaaatataattaatgatggtgggacccac 13722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 586 - 648
Target Start/End: Original strand, 13737 - 13799
Alignment:
Q  586 tgtctatctctctccaacttgtaaatctccatttattttgccaaatggacaggatcttcaccc 648  Q
    ||||||||||||||||||| | ||| ||| ||||||||||||||||||| | |||||||||||    
T  13737 tgtctatctctctccaactagcaaaactctatttattttgccaaatggagaagatcttcaccc 13799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 576
Target Start/End: Complemental strand, 22595 - 22468
Alignment:
Q  449 aagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtggga 548  Q
    |||||| ||||||||||||| | | || ||||||| ||||| |||||||||| ||||||||||||||||| ||| |||||||||| |||| || |||| |    
T  22595 aagatcttctccatttatgtctatctccatttcttacatttagagagataaatacacataaaatcttgaaaaaagtaaaatataattaattattgtggaa 22496  T
Q  549 cccacttagtggtaggacccaccatcta 576  Q
    | ||||||||||||||| |||| |||||    
T  22495 ctcacttagtggtaggatccactatcta 22468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 478 - 576
Target Start/End: Complemental strand, 6559 - 6461
Alignment:
Q  478 tttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgatggtgggacccacttagtggtaggacccaccatcta 576  Q
    ||||||| |||| |||||||||||||||||||||||||| | ||| |||||||||| |||||||||| | ||||| ||||| |||||||||||||||||    
T  6559 tttcttcaattttgagagataaagacacataaaatcttggaaaaagtaaaatataattaatgatggttgtacccatttagttgtaggacccaccatcta 6461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 442 - 569
Target Start/End: Complemental strand, 17456 - 17339
Alignment:
Q  442 acgggtgaagatcctctccatttatgtgtttatcaatttcttccatttggagagataaagacacataaaatcttgaacaaaataaaatataactaatgat 541  Q
    |||||| || |||||||||||||||   ||| |  |||| |||||||| |||||||||||||||||||||          | ||||| |||| |||||||    
T  17456 acgggtcaatatcctctccatttataaatttcttcatttgttccatttagagagataaagacacataaaa----------agtaaaaaataattaatgat 17367  T
Q  542 ggtgggacccacttagtggtaggaccca 569  Q
    |||||||||||||||||| |||||||||    
T  17366 ggtgggacccacttagtgataggaccca 17339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 535 - 572
Target Start/End: Complemental strand, 4768 - 4731
Alignment:
Q  535 taatgatggtgggacccacttagtggtaggacccacca 572  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  4768 taatgatggtgggatccacttagtgataggacccacca 4731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 288 times since January 2019
Visitors: 6127