View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0854_low_22 (Length: 376)

Name: NF0854_low_22
Description: NF0854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0854_low_22
NF0854_low_22
[»] chr7 (68 HSPs)
chr7 (113-192)||(24953262-24953341)
chr7 (119-192)||(6791771-6791844)
chr7 (119-192)||(24812079-24812152)
chr7 (119-191)||(47642497-47642569)
chr7 (118-192)||(5583197-5583271)
chr7 (118-192)||(15715903-15715977)
chr7 (118-192)||(28265087-28265161)
chr7 (118-192)||(41968756-41968830)
chr7 (119-192)||(18519914-18519987)
chr7 (116-192)||(23110764-23110840)
chr7 (117-192)||(35357699-35357774)
chr7 (118-189)||(47369556-47369627)
chr7 (116-192)||(35291660-35291736)
chr7 (116-191)||(39558602-39558677)
chr7 (129-191)||(46291434-46291496)
chr7 (119-192)||(7583344-7583417)
chr7 (119-192)||(11750755-11750828)
chr7 (119-192)||(30076659-30076732)
chr7 (119-192)||(30891278-30891351)
chr7 (118-192)||(17306933-17307007)
chr7 (129-192)||(1269337-1269400)
chr7 (122-189)||(1806484-1806551)
chr7 (113-192)||(38665882-38665961)
chr7 (119-188)||(26605392-26605461)
chr7 (129-176)||(36533397-36533444)
chr7 (129-192)||(45232383-45232446)
chr7 (118-192)||(23608325-23608399)
chr7 (118-192)||(41742580-41742654)
chr7 (129-189)||(3214528-3214588)
chr7 (116-192)||(15584873-15584948)
chr7 (240-272)||(24812204-24812236)
chr7 (240-272)||(26605307-26605339)
chr7 (116-192)||(29682041-29682117)
chr7 (240-272)||(38665712-38665744)
chr7 (240-272)||(38666012-38666044)
chr7 (117-165)||(41771769-41771817)
chr7 (240-272)||(46575355-46575387)
chr7 (240-272)||(47369471-47369503)
chr7 (118-165)||(1282184-1282231)
chr7 (121-192)||(15954133-15954204)
chr7 (241-272)||(17306851-17306882)
chr7 (117-192)||(43631383-43631458)
chr7 (118-164)||(15090667-15090713)
chr7 (118-192)||(30624057-30624130)
chr7 (142-192)||(32529515-32529565)
chr7 (119-192)||(3909928-3910000)
chr7 (143-192)||(23560840-23560889)
chr7 (119-164)||(24505123-24505168)
chr7 (119-164)||(47219956-47220001)
chr7 (240-272)||(3602395-3602427)
chr7 (240-272)||(5583113-5583145)
chr7 (240-272)||(6791688-6791720)
chr7 (240-272)||(7583260-7583292)
chr7 (240-272)||(15716028-15716060)
chr7 (240-272)||(22967666-22967698)
chr7 (240-272)||(23110682-23110714)
chr7 (240-272)||(24953179-24953211)
chr7 (240-272)||(28265003-28265035)
chr7 (240-272)||(31346778-31346810)
chr7 (240-272)||(35291578-35291610)
chr7 (240-272)||(35357824-35357856)
chr7 (240-272)||(39558730-39558762)
chr7 (240-272)||(41047093-41047125)
chr7 (121-189)||(41047179-41047247)
chr7 (240-272)||(41968673-41968705)
chr7 (117-165)||(45197165-45197213)
chr7 (240-272)||(45232299-45232331)
chr7 (160-192)||(46575437-46575469)
[»] chr3 (101 HSPs)
chr3 (119-192)||(26849924-26849997)
chr3 (118-192)||(7352501-7352575)
chr3 (122-192)||(50257802-50257872)
chr3 (121-192)||(50247226-50247297)
chr3 (121-192)||(53289566-53289637)
chr3 (118-192)||(30349005-30349079)
chr3 (117-191)||(35500789-35500863)
chr3 (119-192)||(1020975-1021048)
chr3 (119-192)||(29389031-29389104)
chr3 (114-190)||(34825277-34825353)
chr3 (120-192)||(46507686-46507758)
chr3 (113-192)||(26885305-26885384)
chr3 (118-189)||(29491662-29491733)
chr3 (117-192)||(35137433-35137508)
chr3 (118-192)||(32636625-32636699)
chr3 (110-192)||(46671329-46671410)
chr3 (118-192)||(54428494-54428568)
chr3 (121-189)||(40477759-40477827)
chr3 (121-192)||(13756644-13756715)
chr3 (118-189)||(42622186-42622257)
chr3 (119-189)||(16136959-16137029)
chr3 (118-192)||(23456453-23456527)
chr3 (111-192)||(26012535-26012617)
chr3 (118-192)||(44522022-44522096)
chr3 (117-191)||(51756426-51756499)
chr3 (117-189)||(43745684-43745756)
chr3 (117-192)||(9506901-9506976)
chr3 (117-192)||(9514876-9514951)
chr3 (129-188)||(47745837-47745896)
chr3 (120-178)||(24169956-24170014)
chr3 (119-192)||(40021079-40021152)
chr3 (119-192)||(44653175-44653248)
chr3 (119-192)||(50412406-50412479)
chr3 (122-189)||(1129465-1129532)
chr3 (117-192)||(25482577-25482652)
chr3 (118-185)||(40784890-40784957)
chr3 (111-192)||(36098865-36098944)
chr3 (118-192)||(54788355-54788429)
chr3 (119-188)||(14654120-14654189)
chr3 (117-189)||(26457292-26457364)
chr3 (119-191)||(41217051-41217123)
chr3 (117-192)||(4577607-4577682)
chr3 (117-192)||(11140245-11140319)
chr3 (113-164)||(35320724-35320775)
chr3 (118-189)||(40727685-40727756)
chr3 (129-188)||(42478697-42478756)
chr3 (122-192)||(10279333-10279403)
chr3 (119-189)||(25834232-25834301)
chr3 (114-164)||(33830525-33830575)
chr3 (142-192)||(41982006-41982056)
chr3 (240-274)||(50257923-50257957)
chr3 (123-192)||(5528704-5528773)
chr3 (119-192)||(33006299-33006372)
chr3 (119-192)||(37521761-37521834)
chr3 (240-272)||(1021099-1021131)
chr3 (240-272)||(7352419-7352451)
chr3 (117-189)||(7862149-7862221)
chr3 (240-272)||(9507026-9507058)
chr3 (240-272)||(9515001-9515033)
chr3 (120-192)||(15996821-15996893)
chr3 (240-272)||(26012449-26012481)
chr3 (240-272)||(26850048-26850080)
chr3 (240-272)||(26885223-26885255)
chr3 (240-272)||(29388947-29388979)
chr3 (240-272)||(39987592-39987624)
chr3 (240-272)||(40021203-40021235)
chr3 (240-272)||(40784776-40784808)
chr3 (240-272)||(41982108-41982140)
chr3 (240-272)||(42478811-42478843)
chr3 (133-189)||(51344388-51344444)
chr3 (240-272)||(51350882-51350914)
chr3 (121-192)||(35389616-35389687)
chr3 (142-189)||(36375727-36375774)
chr3 (122-189)||(40473837-40473904)
chr3 (117-192)||(42067577-42067651)
chr3 (241-272)||(46507601-46507632)
chr3 (117-164)||(48925773-48925820)
chr3 (118-192)||(19914040-19914114)
chr3 (122-192)||(29347594-29347663)
chr3 (122-192)||(35749247-35749317)
chr3 (242-272)||(41217179-41217209)
chr3 (119-189)||(42364264-42364333)
chr3 (119-192)||(4817344-4817417)
chr3 (119-192)||(8433437-8433510)
chr3 (119-164)||(32719985-32720030)
chr3 (119-192)||(38785416-38785488)
chr3 (117-165)||(346688-346736)
chr3 (240-272)||(13756559-13756591)
chr3 (240-272)||(14654034-14654066)
chr3 (240-272)||(34825405-34825437)
chr3 (240-272)||(35137560-35137592)
chr3 (117-181)||(37359848-37359912)
chr3 (240-272)||(39908736-39908768)
chr3 (133-189)||(41282871-41282927)
chr3 (240-272)||(44522145-44522177)
chr3 (240-272)||(44653299-44653331)
chr3 (240-268)||(48825658-48825686)
chr3 (240-272)||(51756343-51756375)
chr3 (112-164)||(54008898-54008950)
chr3 (122-174)||(55059535-55059587)
chr3 (116-164)||(55365737-55365785)
[»] scaffold0308 (2 HSPs)
scaffold0308 (120-192)||(7211-7283)
scaffold0308 (240-272)||(7335-7367)
[»] chr5 (50 HSPs)
chr5 (116-192)||(9910376-9910452)
chr5 (112-192)||(33678148-33678228)
chr5 (119-192)||(480008-480081)
chr5 (119-191)||(9604767-9604839)
chr5 (117-192)||(29959877-29959952)
chr5 (121-192)||(33210372-33210443)
chr5 (122-192)||(8258395-8258465)
chr5 (119-192)||(36339180-36339253)
chr5 (119-191)||(28318685-28318757)
chr5 (116-192)||(38293620-38293696)
chr5 (117-192)||(2851688-2851763)
chr5 (122-192)||(9913512-9913582)
chr5 (120-192)||(27979014-27979086)
chr5 (118-189)||(13118800-13118871)
chr5 (117-191)||(4616698-4616772)
chr5 (119-189)||(25929560-25929630)
chr5 (118-192)||(40803318-40803392)
chr5 (118-192)||(42597810-42597883)
chr5 (129-192)||(3024496-3024559)
chr5 (113-191)||(9629900-9629978)
chr5 (122-192)||(36428241-36428311)
chr5 (118-167)||(32993685-32993734)
chr5 (121-192)||(701943-702014)
chr5 (119-192)||(13126980-13127053)
chr5 (142-191)||(35370735-35370784)
chr5 (119-192)||(40563454-40563527)
chr5 (240-272)||(479924-479956)
chr5 (240-272)||(702065-702097)
chr5 (240-272)||(8258518-8258550)
chr5 (116-164)||(22798432-22798480)
chr5 (240-272)||(33678280-33678312)
chr5 (240-272)||(42597726-42597758)
chr5 (121-192)||(6560828-6560898)
chr5 (241-272)||(14435070-14435101)
chr5 (121-192)||(21605650-21605720)
chr5 (117-164)||(25684071-25684118)
chr5 (117-192)||(30753785-30753860)
chr5 (122-189)||(42486942-42487009)
chr5 (118-192)||(34302645-34302718)
chr5 (240-270)||(36428159-36428189)
chr5 (119-165)||(37314198-37314244)
chr5 (240-273)||(19518305-19518338)
chr5 (132-185)||(39041667-39041720)
chr5 (119-192)||(43237687-43237759)
chr5 (240-272)||(4616823-4616855)
chr5 (240-272)||(5359849-5359881)
chr5 (240-272)||(9604682-9604714)
chr5 (240-272)||(13127103-13127135)
chr5 (240-272)||(28318599-28318631)
chr5 (240-272)||(30753701-30753733)
[»] chr1 (87 HSPs)
chr1 (117-192)||(47544293-47544368)
chr1 (119-192)||(477768-477841)
chr1 (119-191)||(52861632-52861704)
chr1 (113-192)||(34038498-34038577)
chr1 (118-189)||(35874275-35874346)
chr1 (118-192)||(17554151-17554225)
chr1 (114-192)||(48760120-48760198)
chr1 (113-192)||(44263640-44263719)
chr1 (118-192)||(24381315-24381389)
chr1 (119-192)||(2249900-2249973)
chr1 (119-192)||(6526762-6526835)
chr1 (119-192)||(30321225-30321298)
chr1 (117-192)||(10348360-10348434)
chr1 (118-189)||(45622821-45622892)
chr1 (114-192)||(8396352-8396430)
chr1 (118-192)||(38717753-38717827)
chr1 (122-192)||(46234831-46234901)
chr1 (119-189)||(48977213-48977283)
chr1 (8-98)||(7889266-7889356)
chr1 (119-192)||(24003754-24003827)
chr1 (119-192)||(51787802-51787875)
chr1 (116-192)||(32710078-32710154)
chr1 (117-189)||(38260800-38260872)
chr1 (113-189)||(51056191-51056266)
chr1 (117-192)||(6965930-6966005)
chr1 (113-192)||(12907273-12907352)
chr1 (117-192)||(25702791-25702866)
chr1 (118-192)||(13203251-13203325)
chr1 (122-192)||(32805735-32805805)
chr1 (122-192)||(52345935-52346005)
chr1 (119-188)||(12105497-12105566)
chr1 (119-192)||(31075944-31076017)
chr1 (119-188)||(47693206-47693275)
chr1 (118-189)||(24230907-24230978)
chr1 (120-188)||(31530649-31530719)
chr1 (118-192)||(24024999-24025073)
chr1 (118-191)||(3399147-3399222)
chr1 (120-192)||(42275670-42275742)
chr1 (117-173)||(45767681-45767737)
chr1 (117-188)||(14153020-14153091)
chr1 (121-192)||(30263916-30263987)
chr1 (142-189)||(30896836-30896883)
chr1 (116-189)||(21072773-21072844)
chr1 (119-189)||(52180234-52180304)
chr1 (240-274)||(52861547-52861581)
chr1 (119-192)||(27295058-27295130)
chr1 (240-272)||(2249838-2249870)
chr1 (133-185)||(7489263-7489315)
chr1 (116-164)||(7489311-7489359)
chr1 (240-272)||(12105411-12105443)
chr1 (240-272)||(12907404-12907436)
chr1 (240-272)||(13203167-13203199)
chr1 (240-272)||(24003671-24003703)
chr1 (240-272)||(28624600-28624632)
chr1 (240-272)||(30571132-30571164)
chr1 (240-272)||(31075861-31075893)
chr1 (240-272)||(32805856-32805888)
chr1 (240-272)||(34038416-34038448)
chr1 (240-272)||(46362273-46362305)
chr1 (117-164)||(7427022-7427069)
chr1 (113-164)||(9223217-9223268)
chr1 (114-185)||(12178601-12178672)
chr1 (117-164)||(49685983-49686030)
chr1 (240-270)||(7489176-7489206)
chr1 (118-192)||(16482575-16482648)
chr1 (122-192)||(24511591-24511661)
chr1 (122-188)||(30571009-30571075)
chr1 (122-192)||(51781438-51781507)
chr1 (119-192)||(922176-922248)
chr1 (131-192)||(6329579-6329639)
chr1 (240-269)||(6526682-6526711)
chr1 (119-164)||(14131711-14131756)
chr1 (143-192)||(31821916-31821965)
chr1 (112-165)||(35534233-35534285)
chr1 (119-164)||(43225007-43225052)
chr1 (240-272)||(477686-477718)
chr1 (240-272)||(6329502-6329534)
chr1 (240-272)||(9587766-9587798)
chr1 (240-272)||(10348276-10348308)
chr1 (240-272)||(21882929-21882961)
chr1 (240-272)||(25702708-25702740)
chr1 (240-272)||(30321142-30321174)
chr1 (240-272)||(31821834-31821866)
chr1 (240-272)||(45622735-45622767)
chr1 (240-272)||(46234955-46234987)
chr1 (240-272)||(51787719-51787751)
chr1 (240-268)||(52345856-52345884)
[»] chr8 (56 HSPs)
chr8 (118-192)||(37676271-37676345)
chr8 (119-192)||(117809-117882)
chr8 (117-192)||(26522300-26522375)
chr8 (121-192)||(34633865-34633936)
chr8 (117-192)||(36667231-36667306)
chr8 (122-192)||(41720250-41720320)
chr8 (121-189)||(1043060-1043128)
chr8 (117-189)||(29454546-29454618)
chr8 (121-192)||(40267479-40267550)
chr8 (117-189)||(4214832-4214904)
chr8 (129-189)||(26988724-26988784)
chr8 (122-192)||(27847512-27847582)
chr8 (109-189)||(6631242-6631323)
chr8 (113-190)||(29265931-29266008)
chr8 (109-192)||(2749640-2749722)
chr8 (119-189)||(2261029-2261099)
chr8 (122-192)||(40578696-40578766)
chr8 (114-191)||(44542148-44542225)
chr8 (118-190)||(36162189-36162261)
chr8 (117-192)||(39300422-39300497)
chr8 (131-192)||(38329783-38329844)
chr8 (119-190)||(9497538-9497609)
chr8 (122-189)||(40776955-40777022)
chr8 (118-192)||(37511087-37511160)
chr8 (148-189)||(7128428-7128469)
chr8 (240-272)||(6983037-6983069)
chr8 (240-272)||(9497661-9497693)
chr8 (240-272)||(10706807-10706839)
chr8 (240-272)||(36667358-36667390)
chr8 (240-272)||(45210411-45210443)
chr8 (112-191)||(29773438-29773516)
chr8 (241-272)||(40267605-40267636)
chr8 (241-272)||(40578817-40578848)
chr8 (115-192)||(24937923-24938001)
chr8 (240-270)||(39300338-39300368)
chr8 (121-170)||(464250-464299)
chr8 (115-164)||(17096643-17096691)
chr8 (119-192)||(28090192-28090264)
chr8 (119-164)||(29565711-29565756)
chr8 (143-192)||(35587970-35588019)
chr8 (122-163)||(38329839-38329880)
chr8 (240-272)||(2749559-2749591)
chr8 (240-272)||(5328722-5328754)
chr8 (240-272)||(6631157-6631189)
chr8 (118-154)||(10706920-10706956)
chr8 (117-189)||(15726227-15726298)
chr8 (240-272)||(26522218-26522250)
chr8 (132-192)||(27171927-27171987)
chr8 (240-268)||(29265847-29265875)
chr8 (240-272)||(34166161-34166193)
chr8 (240-272)||(34633987-34634019)
chr8 (240-268)||(36162315-36162343)
chr8 (240-272)||(37676188-37676220)
chr8 (240-272)||(38329701-38329733)
chr8 (119-191)||(43842178-43842250)
chr8 (240-272)||(44542060-44542092)
[»] chr4 (75 HSPs)
chr4 (114-192)||(23059103-23059181)
chr4 (116-192)||(45692958-45693034)
chr4 (116-192)||(48647355-48647431)
chr4 (117-192)||(50732859-50732934)
chr4 (117-192)||(56104735-56104810)
chr4 (118-192)||(582767-582841)
chr4 (118-192)||(27990873-27990947)
chr4 (119-192)||(1856801-1856874)
chr4 (119-192)||(50383663-50383736)
chr4 (119-192)||(53936846-53936919)
chr4 (116-192)||(126579-126655)
chr4 (117-192)||(3763113-3763188)
chr4 (118-192)||(4720487-4720561)
chr4 (118-192)||(24535819-24535893)
chr4 (118-192)||(50607683-50607757)
chr4 (119-192)||(42177674-42177747)
chr4 (119-192)||(54506206-54506279)
chr4 (117-192)||(9356716-9356791)
chr4 (116-175)||(12356764-12356823)
chr4 (121-188)||(24980279-24980346)
chr4 (129-192)||(26117756-26117819)
chr4 (119-189)||(33491498-33491568)
chr4 (121-189)||(32289242-32289310)
chr4 (118-189)||(352809-352880)
chr4 (117-192)||(27761734-27761809)
chr4 (117-192)||(33491929-33492004)
chr4 (117-192)||(43363325-43363400)
chr4 (122-192)||(8256465-8256535)
chr4 (122-192)||(8269883-8269953)
chr4 (131-192)||(43147504-43147565)
chr4 (122-189)||(423153-423220)
chr4 (142-189)||(5337879-5337926)
chr4 (133-192)||(30348498-30348556)
chr4 (145-192)||(53389181-53389228)
chr4 (118-189)||(56302832-56302903)
chr4 (115-189)||(5971036-5971110)
chr4 (118-189)||(31998725-31998798)
chr4 (118-192)||(32845987-32846061)
chr4 (118-192)||(34828721-34828795)
chr4 (118-192)||(50775773-50775847)
chr4 (122-192)||(54996100-54996170)
chr4 (119-192)||(29581967-29582039)
chr4 (240-272)||(4720592-4720624)
chr4 (240-272)||(26117870-26117902)
chr4 (240-272)||(27990789-27990821)
chr4 (240-272)||(34828845-34828877)
chr4 (117-165)||(45629106-45629154)
chr4 (240-272)||(48647276-48647308)
chr4 (240-272)||(50383581-50383613)
chr4 (240-272)||(50732988-50733020)
chr4 (240-272)||(56104652-56104684)
chr4 (241-272)||(24980192-24980223)
chr4 (241-272)||(32289161-32289192)
chr4 (129-192)||(38008163-38008226)
chr4 (241-272)||(52607821-52607852)
chr4 (118-164)||(21514988-21515034)
chr4 (242-272)||(24535735-24535765)
chr4 (114-192)||(43734855-43734933)
chr4 (114-192)||(43735126-43735204)
chr4 (118-164)||(46222356-46222402)
chr4 (119-192)||(3716325-3716397)
chr4 (119-164)||(54505928-54505973)
chr4 (240-272)||(582892-582924)
chr4 (240-272)||(3763238-3763270)
chr4 (240-272)||(23059019-23059051)
chr4 (240-272)||(27761651-27761683)
chr4 (240-272)||(29364303-29364335)
chr4 (116-164)||(36569645-36569693)
chr4 (240-272)||(38008277-38008309)
chr4 (240-272)||(43147611-43147643)
chr4 (240-272)||(43363450-43363482)
chr4 (240-272)||(43735252-43735284)
chr4 (240-272)||(45692874-45692906)
chr4 (113-189)||(50187498-50187574)
chr4 (240-272)||(53936762-53936794)
[»] scaffold0184 (1 HSPs)
scaffold0184 (119-192)||(16916-16989)
[»] scaffold0078 (1 HSPs)
scaffold0078 (119-192)||(55855-55928)
[»] chr6 (33 HSPs)
chr6 (119-192)||(8549888-8549961)
chr6 (119-192)||(33574504-33574577)
chr6 (117-192)||(1244813-1244888)
chr6 (118-189)||(3141376-3141447)
chr6 (110-192)||(9686767-9686849)
chr6 (119-192)||(9661752-9661825)
chr6 (119-189)||(4509430-4509500)
chr6 (119-192)||(23416494-23416567)
chr6 (120-192)||(4576386-4576458)
chr6 (118-192)||(243220-243294)
chr6 (119-192)||(22755241-22755314)
chr6 (120-192)||(13719112-13719184)
chr6 (129-192)||(14778919-14778985)
chr6 (142-192)||(8310200-8310250)
chr6 (240-272)||(243138-243170)
chr6 (240-272)||(2564847-2564879)
chr6 (240-272)||(3141292-3141324)
chr6 (240-272)||(22755364-22755396)
chr6 (121-192)||(2258905-2258975)
chr6 (117-164)||(6016166-6016213)
chr6 (118-192)||(1096220-1096293)
chr6 (119-189)||(33573999-33574068)
chr6 (119-192)||(6093660-6093733)
chr6 (118-191)||(29023943-29024016)
chr6 (119-192)||(31644735-31644808)
chr6 (240-272)||(529048-529080)
chr6 (240-272)||(1244941-1244973)
chr6 (240-272)||(4576508-4576540)
chr6 (116-164)||(4979449-4979497)
chr6 (240-272)||(8549806-8549838)
chr6 (240-272)||(9661877-9661909)
chr6 (240-272)||(9686899-9686931)
chr6 (240-272)||(23416619-23416651)
[»] chr2 (48 HSPs)
chr2 (119-192)||(9589113-9589186)
chr2 (121-192)||(7673633-7673704)
chr2 (113-192)||(30980874-30980953)
chr2 (118-189)||(40947100-40947171)
chr2 (119-189)||(4740227-4740297)
chr2 (122-192)||(18999053-18999123)
chr2 (118-192)||(21404532-21404606)
chr2 (119-189)||(39620191-39620261)
chr2 (119-192)||(1580575-1580648)
chr2 (119-192)||(4049294-4049367)
chr2 (119-192)||(45157530-45157603)
chr2 (118-185)||(14839805-14839872)
chr2 (119-192)||(17451618-17451691)
chr2 (119-192)||(40495465-40495538)
chr2 (117-189)||(35896749-35896821)
chr2 (116-188)||(42849665-42849737)
chr2 (129-192)||(9122490-9122553)
chr2 (117-192)||(32602637-32602712)
chr2 (119-192)||(6945340-6945413)
chr2 (120-192)||(34091696-34091768)
chr2 (129-192)||(4298235-4298298)
chr2 (122-192)||(3260965-3261035)
chr2 (240-272)||(4049210-4049242)
chr2 (240-272)||(6945464-6945496)
chr2 (240-272)||(7673548-7673580)
chr2 (240-272)||(9589237-9589269)
chr2 (240-272)||(17451534-17451566)
chr2 (240-272)||(18998970-18999002)
chr2 (240-272)||(27400853-27400885)
chr2 (240-272)||(38064781-38064813)
chr2 (240-272)||(44144336-44144368)
chr2 (241-272)||(16637278-16637309)
chr2 (117-164)||(37725549-37725596)
chr2 (117-164)||(40533249-40533296)
chr2 (118-164)||(21425211-21425257)
chr2 (119-164)||(490095-490140)
chr2 (142-191)||(43440331-43440380)
chr2 (240-272)||(4298152-4298184)
chr2 (240-272)||(4740346-4740378)
chr2 (240-272)||(14839923-14839955)
chr2 (240-272)||(15383195-15383227)
chr2 (115-191)||(15383278-15383354)
chr2 (240-272)||(21404450-21404482)
chr2 (129-189)||(32401427-32401487)
chr2 (240-272)||(32602556-32602588)
chr2 (116-192)||(38064655-38064731)
chr2 (240-272)||(40495590-40495622)
chr2 (240-272)||(45157653-45157685)
[»] scaffold0432 (1 HSPs)
scaffold0432 (119-189)||(3366-3436)
[»] scaffold0775 (1 HSPs)
scaffold0775 (119-192)||(172-245)
[»] scaffold0060 (1 HSPs)
scaffold0060 (117-192)||(45759-45834)
[»] scaffold0239 (1 HSPs)
scaffold0239 (119-164)||(15380-15425)


Alignment Details
Target: chr7 (Bit Score: 64; Significance: 7e-28; HSPs: 68)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 24953341 - 24953262
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  24953341 aaaataggcaaattctatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 24953262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 6791844 - 6791771
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  6791844 ggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgag 6791771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 24812079 - 24812152
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| ||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  24812079 ggcaaattctatggtacactcactatatttgagtgtaccggtacactcactctttaaatttatagttaaatgag 24812152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 47642497 - 47642569
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    ||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  47642497 ggcaaattttatggtacacccattatatttgagtgtaccggtacactcactctttaaattcatagttaaatga 47642569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 5583271 - 5583197
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  5583271 aggcaaattctatggtacacccaatatatttgagtgtaccggtaaactcactctttaaattaatagttaaatgag 5583197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 15715903 - 15715977
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||||||||||    
T  15715903 aggcaaattctatggtacacccactatatttgagtgtaccggtacacccactctttaaattcatagttaaatgag 15715977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 28265161 - 28265087
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||||| |||||||||||| | |||||||||||||||||||||| |||||||||||||    
T  28265161 aggcaaattctatggtacacccactatatttgagtgcaccggtacactcactctttaaattcatagttaaatgag 28265087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 41968830 - 41968756
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  41968830 aggcaaattctatggtacacctaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgag 41968756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 18519914 - 18519987
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  18519914 ggcaaattctatggtacatccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 18519987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 23110840 - 23110764
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||| |||||  |||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23110840 ataggtaaattttatggtacatccactatatttgagtgtaccggtacactcactctttaaatttatagttaaatgag 23110764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 35357699 - 35357774
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  35357699 taggcaaattctatggtacatccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgag 35357774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 47369627 - 47369556
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| |||||||||||| |||||||||||||| || ||||||||||||||||||| ||||||||||    
T  47369627 aggcaaattctatggtacacccaatatatttgagtgtaccgatacactcactctttaaattcatagttaaat 47369556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 35291736 - 35291660
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| |||  ||||||| |||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  35291736 ataggcaaattctatgacacacccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgag 35291660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 116 - 191
Target Start/End: Original strand, 39558602 - 39558677
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    |||||||||||| |||||||||||| ||||||| |||||| |||||||| || |||||||||| ||||||||||||    
T  39558602 ataggcaaattctatggtacacccactatatttaagtgtaccggtacacccattctttaaattcatagttaaatga 39558677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 129 - 191
Target Start/End: Complemental strand, 46291496 - 46291434
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    |||||||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||||    
T  46291496 atggtacacccaatatatttgagtgtaccggtacacgcactctttaaattaatagttaaatga 46291434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 7583417 - 7583344
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| ||| |||||||| ||||||| |||| |||||||||||||||||| ||||| |||||||||||||    
T  7583417 ggcaaattctatgatacacccactatatttaagtgcatcggtacactcactcttaaaattcatagttaaatgag 7583344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 11750828 - 11750755
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||  ||| |||||||| | ||||||||||||  |||||||||||||||||||||||||||||||||||    
T  11750828 ggcaaattatatgatacacccactctatttgagtgtactggtacactcactctttaaatttatagttaaatgag 11750755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 30076659 - 30076732
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| ||||||||||||||   ||||||| |||||||||||| |||||||||||||    
T  30076659 ggcaaattctatggtacacccactatatttgagtgtactagtacactaactctttaaattcatagttaaatgag 30076732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 30891278 - 30891351
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| ||||||||||||||  ||||||||||||||||||||| || ||||||||||    
T  30891278 ggcaaattctatggtacatccaatatatttgagtgtactggtacactcactctttaaattaatggttaaatgag 30891351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 17307007 - 17306933
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||  |||||||||| | |||||||||||||||||||| ||| | |||||||||| |||||||||||||    
T  17307007 aggcaaattttatggtacacctaatatatttgagtgtatcggtatacttattctttaaattaatagttaaatgag 17306933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 1269400 - 1269337
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| ||||||||| |||||||||| ||| ||| |||||||| |||||||||||||    
T  1269400 atggtacacccactatatttgaatgtatcggtatacttactgtttaaattaatagttaaatgag 1269337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 1806484 - 1806551
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||| ||||||||| || |||||||||||||| ||||||||  |||||||||||| ||||||||||    
T  1806484 aaattctatggtacactcaatatatttgagtgtaccggtacacctactctttaaattaatagttaaat 1806551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 38665882 - 38665961
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||| |||||||||| |  ||||| ||| |||||||||||||| ||||||||| |||||||||||| || ||||||||||    
T  38665882 aaaaaaggcaaattctacagtacatccactatatttgagtgtaccggtacacttactctttaaattcatggttaaatgag 38665961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 26605461 - 26605392
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    ||||||||| |||||||||||| |||||||||||||| |  || || ||||||||||||| |||||||||    
T  26605461 ggcaaattctatggtacacccaatatatttgagtgtaccaatatacccactctttaaattaatagttaaa 26605392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 36533444 - 36533397
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaa 176  Q
    |||||||||||| |||||||||||||| ||||||||||| ||||||||    
T  36533444 atggtacacccaatatatttgagtgtaccggtacactcattctttaaa 36533397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 45232446 - 45232383
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| ||||||||||||||  ||||||| || ||||||| || |||||||||||||    
T  45232446 atggtacacccaatatatttgagtgtactggtacacccattctttaatttaatagttaaatgag 45232383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 23608399 - 23608325
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| | ||||||||||  |||||||||||||  |||||||| || |||||| ||||||| ||||||||    
T  23608399 aggcaaattctacggtacacccaacatatttgagtgtactggtacactaaccctttaattttatagataaatgag 23608325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 41742580 - 41742654
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| | ||||||||||  ||||||||||||| ||||||||  || |||||| ||||||| ||||||||    
T  41742580 aggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgag 41742654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 189
Target Start/End: Original strand, 3214528 - 3214588
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||||| ||||||| |||||| | ||||||  |||||||||||| ||||||||||    
T  3214528 atggtacacccaatatatttaagtgtaccagtacacctactctttaaattaatagttaaat 3214588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 15584948 - 15584873
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||  ||||||||| ||  ||||||||||||| || |||||| | || |||||||||||||||||||||    
T  15584948 ataggcaaattttatggtacacgcaacatatttgagtgtaacg-tacactaaatccttaaatttatagttaaatgag 15584873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 24812204 - 24812236
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  24812204 ctaaatcttattcatcaaaagtgtcaacgaaat 24812236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 26605339 - 26605307
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  26605339 ctaaatcttattcatcaaaagtgtcaacgaaat 26605307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 29682041 - 29682117
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| | |||||| |||  |||||||||||||||||||||   ||||||||| ||||||  ||||||||    
T  29682041 ataggcaaattctacggtacatccaacatatttgagtgtatcggtacatcaactctttaattttataagtaaatgag 29682117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 38665744 - 38665712
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  38665744 ctaaatcttattcatcaaaagtgtcaacgaaat 38665712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 38666012 - 38666044
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  38666012 ctaaatcttattcatcaaaagtgtcaacgaaat 38666044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 41771817 - 41771769
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacact 165  Q
    ||||||||||  |||||||||||| |||||||||||||| |||||||||    
T  41771817 taggcaaattttatggtacacccaatatatttgagtgtaccggtacact 41771769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 46575387 - 46575355
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  46575387 ctaaatcttattcatcaaaagtgtcaacgaaat 46575355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 47369503 - 47369471
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  47369503 ctaaatcttattcatcaaaagtgtcaacgaaat 47369471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 1282184 - 1282231
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacact 165  Q
    |||||||||| |||||||||||| || ||||| |||||||||||||||    
T  1282184 aggcaaattctatggtacacccaataaatttgggtgtatcggtacact 1282231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 15954133 - 15954204
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||||| ||| |||||||||||||| ||||| ||||| | |||||||  || ||||||||||    
T  15954133 caaattctatggtacatccaatatatttgagtgtaccggtatactcattatttaaatcaatggttaaatgag 15954204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 17306882 - 17306851
Alignment:
Q  241 taaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||||||||    
T  17306882 taaatcttattcatcaaaagtgtcaacgaaat 17306851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 43631458 - 43631383
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||||| |  ||||||||||||| ||||||||  || |||||| ||||||| ||| ||||    
T  43631458 taggcaaattctatggtacacctaacatatttgagtgtaccggtacaccaaccctttaattttataggtaattgag 43631383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 15090667 - 15090713
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    |||||||||| |||||||||||| || ||||| ||||||||||||||    
T  15090667 aggcaaattctatggtacacccaataaatttgggtgtatcggtacac 15090713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 30624130 - 30624057
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| ||| |||||||||||| || |||||||||||| |||||||  | | |||||||| |||||||||||||    
T  30624130 aggcaagttctatggtacacccaata-atttgagtgtattggtacaccaaatttttaaattaatagttaaatgag 30624057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 32529565 - 32529515
Alignment:
Q  142 tatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||||||| ||||||  |||||||||||| || ||||||||||    
T  32529565 tatatttgagtgtatcagtacacctactctttaaattaatggttaaatgag 32529515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 3909928 - 3910000
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| ||||||||||||  | |||||||||||| |||||||  | | |||||||| |||||||||||||    
T  3909928 ggcaaattctatggtacacccaaca-atttgagtgtattggtacaccgaatttttaaattaatagttaaatgag 3910000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 23560840 - 23560889
Alignment:
Q  143 atatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||||| ||||||||| |  | |||||||||||||||||||||    
T  23560840 atatttgagtgtaccggtacactaaaaccttaaatttatagttaaatgag 23560889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 24505123 - 24505168
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||||    
T  24505123 ggcaaattctatggtacacccaataaatttgggtgtatcggtacac 24505168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 47219956 - 47220001
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||||    
T  47219956 ggcaaattctatggtacacccaataaatttgggtgtatcggtacac 47220001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 3602395 - 3602427
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||| ||||||||||||    
T  3602395 ctaaatcttattcatcaaaaatgtcaacgaaat 3602427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 5583145 - 5583113
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||| ||||    
T  5583145 ctaaatcttattcatcaaaagtgtcaacaaaat 5583113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 6791720 - 6791688
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  6791720 ctaaatcttattcatcaaaagtgttaacgaaat 6791688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 7583292 - 7583260
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||| |||||||||||||    
T  7583292 ctaaatcttattcatcaaacgtgtcaacgaaat 7583260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 15716028 - 15716060
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||| ||||||||||||    
T  15716028 ctaaatcttattcatcaaaaatgtcaacgaaat 15716060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 22967698 - 22967666
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||| ||||||||||||||||||||||||||    
T  22967698 ctaaatattattcatcaaaagtgtcaacgaaat 22967666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 23110714 - 23110682
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||| |||||||||||||||||    
T  23110714 ctaaatcttattcattaaaagtgtcaacgaaat 23110682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 24953211 - 24953179
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||| |||||    
T  24953211 ctaaatcttattcatcaaaagtgtcaatgaaat 24953179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 28265035 - 28265003
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||| |||||||||||||    
T  28265035 ctaaatcttattcatcaaacgtgtcaacgaaat 28265003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 31346778 - 31346810
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  31346778 ctaaatcttattcatcaaaagtgttaacgaaat 31346810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 35291610 - 35291578
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  35291610 ctaaatcttattcatcaaaagtgttaacgaaat 35291578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 35357824 - 35357856
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  35357824 ctaaatcttattcatcaaaagtgttaacgaaat 35357856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 39558730 - 39558762
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||| ||||||||||||||||||||||||||    
T  39558730 ctaaattttattcatcaaaagtgtcaacgaaat 39558762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 41047125 - 41047093
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||| |||||    
T  41047125 ctaaatcttattcatcaaaagtgtcaatgaaat 41047093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 41047247 - 41047179
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||| ||||||||   | ||||||| ||| ||| |||||||| |||||||||||| ||||||||||    
T  41047247 caaattctatggtacaaataatatatttaagtttattggtacacttactctttaaattaatagttaaat 41047179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 41968705 - 41968673
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  41968705 ctaaatcttattcatcaaaagtgttaacgaaat 41968673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 165
Target Start/End: Complemental strand, 45197213 - 45197165
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacact 165  Q
    ||||||||||| |||||||||||| || |||||  ||||||||||||||    
T  45197213 taggcaaattctatggtacacccaataaatttggatgtatcggtacact 45197165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 45232331 - 45232299
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||| ||||||||||||||||||||||||||    
T  45232331 ctaaattttattcatcaaaagtgtcaacgaaat 45232299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 192
Target Start/End: Complemental strand, 46575469 - 46575437
Alignment:
Q  160 tacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||||||||||| ||||||||||||    
T  46575469 tacactcactctttaaatttttagttaaatgag 46575437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 101)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 26849924 - 26849997
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  26849924 ggcaaattctatggtacacccattatatttgagtgtatcggtacactcactttttaaattcatagttaaatgag 26849997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 7352575 - 7352501
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  7352575 aggcaaattctatggtacatccactatatttgagtgtatcggtacactcactcattaaatttatagttaaatgag 7352501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 50257802 - 50257872
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50257802 aaattctatggtacacctactatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 50257872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 50247226 - 50247297
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||||||||||    
T  50247226 caaattccatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaatgag 50247297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 53289637 - 53289566
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  53289637 caaattctatggtacacccactatatttgagtgtacctgtacactcactctttaaatttatagttaaatgag 53289566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 30349005 - 30349079
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| | ||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  30349005 aggcaaattctacggtacactcattatatttgagtgtatcggtacattcactctttaaattcatagttaaatgag 30349079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 35500789 - 35500863
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    ||||||||||| |||||||||||| |||||||||||| | |||||||||||||||||||||| ||||||||||||    
T  35500789 taggcaaattctatggtacacccactatatttgagtgcaccggtacactcactctttaaattcatagttaaatga 35500863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 1020975 - 1021048
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| ||||||||||||| |||||||| |||||||||||||    
T  1020975 ggcaaattctatggtacacccactatatttgagtgtaccggtacactcactttttaaattcatagttaaatgag 1021048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 29389104 - 29389031
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  29389104 ggcaaattctatggtacatccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 29389031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 34825277 - 34825353
Alignment:
Q  114 aaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatg 190  Q
    ||||||| |||||  |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||    
T  34825277 aaataggaaaattatatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatg 34825353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 46507758 - 46507686
Alignment:
Q  120 gcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| |||||||||||| |||||||||||||| ||||| |||||||||||||||| |||||||||||||    
T  46507758 gcaaattctatggtacacccactatatttgagtgtaccggtaaactcactctttaaattcatagttaaatgag 46507686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 26885384 - 26885305
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||||||  | |||||||||| |||||||||||||    
T  26885384 aaaataggcaaattttatggtacacccaatatatttgagtgtatcggtacaccaattctttaaattaatagttaaatgag 26885305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 29491662 - 29491733
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  29491662 aggcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaat 29491733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 35137433 - 35137508
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||||||| |||||||||||| | ||||||||||||| |||||||| |||||||||||||    
T  35137433 taggcaaattctatggtacacccactatatttgagtgcaccggtacactcactttttaaattcatagttaaatgag 35137508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 32636625 - 32636699
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||||| |||||||||||||| || ||||||||||| ||||||| |||||||||||||    
T  32636625 aggcaaattctatggtacacccaatatatttgagtgtaccgatacactcactccttaaattaatagttaaatgag 32636699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 46671329 - 46671410
Alignment:
Q  110 tataaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| ||||||||  | |||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  46671329 tataaaat-ggcaaattatacggtacacccaatatatttgagtgtaccggtacactcactctttaaattaatagttaaatgag 46671410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 54428494 - 54428568
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||| |||||||||||||||||| | |||||| ||||||||||||| |||||||||||||    
T  54428494 aggcaaattctatggtacatccattatatttgagtgtacctgtacacccactctttaaattcatagttaaatgag 54428568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 40477759 - 40477827
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  40477759 caaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaat 40477827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 13756715 - 13756644
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| ||| |||||||| |||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  13756715 caaattctatgttacacccactatatttgagtgtaccgatacactcactctttaaattcatagttaaatgag 13756644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 42622257 - 42622186
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||  |||||||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  42622257 aggcaaattttatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaat 42622186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 16137029 - 16136959
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||| |||||||| ||| ||||||||||||||||||||||  ||||||||||||| ||||||||||    
T  16137029 ggcaaattctatggtacatccaatatatttgagtgtatcggtacatccactctttaaattaatagttaaat 16136959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 23456453 - 23456527
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| ||  |||||||| ||||||||||||||||||||||  ||||||||||||| |||||||||||||    
T  23456453 aggcaaattctatattacacccaatatatttgagtgtatcggtacatccactctttaaattaatagttaaatgag 23456527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 111 - 192
Target Start/End: Complemental strand, 26012617 - 26012535
Alignment:
Q  111 ataaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaattt-atagttaaatgag 192  Q
    |||||| | |||||||| |||||||| ||| ||||||||||||||  |||||||||||||||||||||| |||||||||||||    
T  26012617 ataaaaaatgcaaattctatggtacatccactatatttgagtgtactggtacactcactctttaaatttcatagttaaatgag 26012535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 44522022 - 44522096
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| ||||||||  || ||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  44522022 aggcaaattctatggtacattcaatatatttgagtgtattggtacattcactctttaaattaatagttaaatgag 44522096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 117 - 191
Target Start/End: Complemental strand, 51756499 - 51756426
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    ||||||||||| |||||||||||| |||||||||||||| | ||||||||||| |||||||| ||||||||||||    
T  51756499 taggcaaattctatggtacacccaatatatttgagtgta-ccgtacactcactttttaaattaatagttaaatga 51756426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 43745756 - 43745684
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||||| ||||||||| || ||||||||||| || |||||||| ||||||||||||| ||||||||||    
T  43745756 taggcaaattctatggtacactcaatatatttgagtataccggtacacccactctttaaattaatagttaaat 43745684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 9506901 - 9506976
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| ||| |||||||| |||||||||||| ||||||||||  | |||||||||| |||||||||||||    
T  9506901 taggcaaattctatgatacacccaatatatttgagtgcatcggtacaccaattctttaaattaatagttaaatgag 9506976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 9514876 - 9514951
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| ||| |||||||| |||||||||||| ||||||||||  | |||||||||| |||||||||||||    
T  9514876 taggcaaattctatgatacacccaatatatttgagtgcatcggtacaccaattctttaaattaatagttaaatgag 9514951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 47745837 - 47745896
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    |||||||||||| |||||||||||||| |||| ||||||||||||||||| |||||||||    
T  47745837 atggtacacccaatatatttgagtgtaccggtgcactcactctttaaattaatagttaaa 47745896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 24169956 - 24170014
Alignment:
Q  120 gcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatt 178  Q
    |||||||  |||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  24169956 gcaaattttatggtacacccagtatatttgagtgtatcggtacacccactctttaaatt 24170014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 40021079 - 40021152
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| ||||||||||||||  ||||||  ||||||||||||| |||||||||||||    
T  40021079 ggcaaattctatggtacatccaatatatttgagtgtactggtacatccactctttaaattaatagttaaatgag 40021152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 44653175 - 44653248
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||| | || ||||||||||||||||| | |||||||||||||| || ||||||||||    
T  44653175 ggcaaattctatggtacacctaatacatttgagtgtatcggtatagtcactctttaaattaatggttaaatgag 44653248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 50412479 - 50412406
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| ||||||| | ||| |||||||| || ||||||||||    
T  50412479 ggcaaattctatggtacacccaatatatttgagtgtaccggtacatttactttttaaattaatggttaaatgag 50412406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 1129532 - 1129465
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||| ||||||||| || || ||||||||||| |||||||| ||||||||||||| ||||||||||    
T  1129532 aaattctatggtacactcaatacatttgagtgtaccggtacacccactctttaaattaatagttaaat 1129465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 25482652 - 25482577
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||  | |||||||| | |||||||||||||||||||||||  | |||||||||| |||||||||||||    
T  25482652 taggcaaattataaggtacacctaatatatttgagtgtatcggtacacctattctttaaattaatagttaaatgag 25482577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 185
Target Start/End: Complemental strand, 40784957 - 40784890
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagtt 185  Q
    |||||||||| ||||||||   | |||||||||||||||||||||| |||||||||||||| ||||||    
T  40784957 aggcaaattctatggtacatataatatatttgagtgtatcggtacattcactctttaaattaatagtt 40784890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 36098865 - 36098944
Alignment:
Q  111 ataaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| || ||||||  |||||||||||| |||||||||||||| |  ||||| ||||||||||||| |||||||||||||    
T  36098865 ataaaaaagacaaattttatggtacacccaatatatttgagtgtacc--tacacccactctttaaattaatagttaaatgag 36098944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 54788355 - 54788429
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||  |||||||| | | |||||||||||||| || ||||| ||||||||||||| |||||||||||||    
T  54788355 aggcaaattgtatggtacatcaaatatatttgagtgtaccgatacacccactctttaaattaatagttaaatgag 54788429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 14654189 - 14654120
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    ||||||||| |||||||||||| |||||||||||||| ||| |||  |||| |||||||| |||||||||    
T  14654189 ggcaaattctatggtacacccaatatatttgagtgtaccggaacatccactatttaaattaatagttaaa 14654120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 26457364 - 26457292
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||||| | |||||| ||| ||||||||||||||   |||||| ||||||||||||| ||||||||||    
T  26457364 taggcaaattctacggtacatccaatatatttgagtgtactagtacacacactctttaaattaatagttaaat 26457292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 191
Target Start/End: Original strand, 41217051 - 41217123
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    ||||||||| |||||||||||| |||||||||||||| || || ||| ||| |||||||| | ||||||||||    
T  41217051 ggcaaattctatggtacacccactatatttgagtgtaccgatatacttactttttaaattcaaagttaaatga 41217123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 4577682 - 4577607
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| | ||||||||||  ||||||||||||| ||||||||  || |||||| ||||||| ||||||||    
T  4577682 taggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgag 4577607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 11140245 - 11140319
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||||||| || |||||||||||| |||||||  | || ||||||| |||||||||||||    
T  11140245 taggcaaattctatggtacacccaata-atttgagtgtattggtacaccaaatccttaaattaatagttaaatgag 11140319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 35320775 - 35320724
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||||||||| |||||||||||| || ||||| ||||||||||||||    
T  35320775 aaaataggcaaattctatggtacacccactaaatttgggtgtatcggtacac 35320724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 40727756 - 40727685
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||  || |||||| || |||||||||||||| |||||||| ||||||||||||| ||| ||||||    
T  40727756 aggcaaattttattgtacactcaatatatttgagtgtaccggtacacacactctttaaattaataattaaat 40727685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 42478697 - 42478756
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    |||||||||||| |||||||||||||| || ||||  ||||||||||||| |||||||||    
T  42478697 atggtacacccaatatatttgagtgtaccgatacatccactctttaaattaatagttaaa 42478756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 10279403 - 10279333
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||| | ||  |||||||||||| || || |||||||||||||||| |||||||||||||    
T  10279403 aaattctatggtacatctatcgtatttgagtgtaccgctatactcactctttaaattaatagttaaatgag 10279333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 25834232 - 25834301
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||| | || ||||||||| ||||||| |||||| |||||||| ||||||||||||| ||||||||||    
T  25834232 ggcaaatcctatagtacacccaatatatttaagtgtaccggtacac-cactctttaaattaatagttaaat 25834301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Original strand, 33830525 - 33830575
Alignment:
Q  114 aaataggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    |||||||||||||| |||||||||||| || ||||| ||||||||||||||    
T  33830525 aaataggcaaattctatggtacacccaataaatttgggtgtatcggtacac 33830575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 41982006 - 41982056
Alignment:
Q  142 tatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||||||||||||||||| || |||||||| || ||||||||||    
T  41982006 tatatttgagtgtatcggtacactcgctttttaaattaatggttaaatgag 41982056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 274
Target Start/End: Original strand, 50257923 - 50257957
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaatga 274  Q
    |||||||||||||||||||||||||||||||||||    
T  50257923 ctaaatcttattcatcaaaagtgtcaacgaaatga 50257957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 123 - 192
Target Start/End: Original strand, 5528704 - 5528773
Alignment:
Q  123 aattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||| |||||||||| |  ||||||||||||| ||||||||| |  | |||||||||||||||||||||    
T  5528704 aattctatggtacacctaacatatttgagtgtaccggtacactaaacccttaaatttatagttaaatgag 5528773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 33006299 - 33006372
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||  ||| |||||||| | ||||||||||||  ||||||| |||| |||||||| |||||||||||||    
T  33006299 ggcaaattttatgctacacccaatgtatttgagtgtacaggtacacccactttttaaattaatagttaaatgag 33006372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 37521834 - 37521761
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||  ||||| || ||| |||||||||||||||| |||||||||||||| ||||| ||  |||||||||    
T  37521834 ggcaaattatatggtgcatccaatatatttgagtgtatcagtacactcactcttcaaattaatgattaaatgag 37521761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 1021099 - 1021131
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  1021099 ctaaatcttattcatcaaaagtgtcaacgaaat 1021131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 7352451 - 7352419
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  7352451 ctaaatcttattcatcaaaagtgtcaacgaaat 7352419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 7862149 - 7862221
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||||  |||||||||| | ||||||||||| || ||||||||  |||||||||||| ||| ||||||    
T  7862149 taggcaaattttatggtacacctaatatatttgagtataccggtacacatactctttaaattaataattaaat 7862221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 9507026 - 9507058
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  9507026 ctaaatcttattcatcaaaagtgtcaacgaaat 9507058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 9515001 - 9515033
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  9515001 ctaaatcttattcatcaaaagtgtcaacgaaat 9515033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 15996821 - 15996893
Alignment:
Q  120 gcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| |||||||||||| ||||||| |||||| |||||||   | | |||||||| |||||||||||||    
T  15996821 gcaaattctatggtacacccaatatatttaagtgtaccggtacatctattttttaaattaatagttaaatgag 15996893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 26012481 - 26012449
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  26012481 ctaaatcttattcatcaaaagtgtcaacgaaat 26012449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 26850048 - 26850080
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  26850048 ctaaatcttattcatcaaaagtgtcaacgaaat 26850080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 26885255 - 26885223
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  26885255 ctaaatcttattcatcaaaagtgtcaacgaaat 26885223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 29388979 - 29388947
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  29388979 ctaaatcttattcatcaaaagtgtcaacgaaat 29388947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 39987624 - 39987592
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  39987624 ctaaatcttattcatcaaaagtgtcaacgaaat 39987592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 40021203 - 40021235
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  40021203 ctaaatcttattcatcaaaagtgtcaacgaaat 40021235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 40784808 - 40784776
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  40784808 ctaaatcttattcatcaaaagtgtcaacgaaat 40784776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 41982108 - 41982140
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  41982108 ctaaatcttattcatcaaaagtgtcaacgaaat 41982140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 42478811 - 42478843
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  42478811 ctaaatcttattcatcaaaagtgtcaacgaaat 42478843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 51344388 - 51344444
Alignment:
Q  133 tacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||| ||||||||||||||  ||||||| || |||||||||| ||||||||||    
T  51344388 tacacccaatatatttgagtgtacaggtacacacattctttaaattaatagttaaat 51344444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 51350914 - 51350882
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  51350914 ctaaatcttattcatcaaaagtgtcaacgaaat 51350882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 35389687 - 35389616
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||||| ||| |||||| ||  ||| |||||||||||||| ||||||| || ||||||||||    
T  35389687 caaattctatggtacatccaatatattggaacgtaccggtacactcactcgttaaattaatggttaaatgag 35389616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 36375774 - 36375727
Alignment:
Q  142 tatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||||||||  |||||||||| |||||||||| ||||||||||    
T  36375774 tatatttgagtgtactggtacactcattctttaaattaatagttaaat 36375727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 40473837 - 40473904
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||| ||||||| | || |||||||||||||| | ||||||  |||||||||||| ||||||||||    
T  40473837 aaattctatggtacgcgcaatatatttgagtgtaccagtacacatactctttaaattaatagttaaat 40473904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 42067577 - 42067651
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| ||||||||||||  | |||||||||||| |||||||  | || ||||||| |||||||||||||    
T  42067577 taggcaaattctatggtacacccaaca-atttgagtgtattggtacaccaaatccttaaattaatagttaaatgag 42067651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 46507632 - 46507601
Alignment:
Q  241 taaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||||||||    
T  46507632 taaatcttattcatcaaaagtgtcaacgaaat 46507601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 48925820 - 48925773
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||||| |||||||||||| || |||||| |||||||||||||    
T  48925820 taggcaaattctatggtacacccaataaatttgaatgtatcggtacac 48925773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 19914040 - 19914114
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| | ||||||||||  ||||||||||||| ||||| ||  || |||||| ||||||| ||||||||    
T  19914040 aggcaaattctacggtacacccaacatatttgagtgtaccggtataccaaccctttaattttataggtaaatgag 19914114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 29347663 - 29347594
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| ||||||||||||  | |||||||||||| |||||||  | |||||||||| |||||||||||||    
T  29347663 aaattctatggtacacccaaca-atttgagtgtattggtacaccaaatctttaaattaatagttaaatgag 29347594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 35749317 - 35749247
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| | |||||| |||  ||||||||||||||||||||||  || |||||| ||||||| ||||||||    
T  35749317 aaattctacggtacatccaacatatttgagtgtatcggtacaccaaccctttaattttataggtaaatgag 35749247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 272
Target Start/End: Original strand, 41217179 - 41217209
Alignment:
Q  242 aaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||    
T  41217179 aaatcttattcatcaaaagtgtcaacgaaat 41217209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 42364333 - 42364264
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||| |||||||||||| || |||||||||||| |||||||  | || ||||||| ||||||||||    
T  42364333 ggcaaattctatggtacacccaata-atttgagtgtattggtacaccaaatccttaaattaatagttaaat 42364264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 4817417 - 4817344
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| || ||||||||| |||||||| ||| |  | |||| | |||||||||||| |||||||||||||    
T  4817417 ggcaaattctatagtacacccaatatatttgggtgcactgatacaattactctttaaattaatagttaaatgag 4817344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 8433437 - 8433510
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| | ||||||||||  ||||||||||||| ||||||||  |  | ||||| |||||||||||||||    
T  8433437 ggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaacccttaaaattatagttaaatgag 8433510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 32719985 - 32720030
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||||    
T  32719985 ggcaaattctatggtacacccaataaatttgggtgtatcggtacac 32720030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 38785488 - 38785416
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||  |||||||||||| || |||||||||||| |||||||  | || ||||||| |||||||||||||    
T  38785488 ggcaaattatatggtacacccaata-atttgagtgtattggtacaccaaatccttaaattaatagttaaatgag 38785416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 346688 - 346736
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacact 165  Q
    ||||||||||| |||||||||||| || |||||  ||||||||||||||    
T  346688 taggcaaattctatggtacacccaataaatttggatgtatcggtacact 346736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 13756591 - 13756559
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||| ||||||||||||||||||||    
T  13756591 ctaaatcttatttatcaaaagtgtcaacgaaat 13756559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 14654066 - 14654034
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||| |||||||||||||||||||    
T  14654066 ctaaatcttattcgtcaaaagtgtcaacgaaat 14654034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 34825405 - 34825437
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||| ||||||||||||||||||||||||||    
T  34825405 ctaaattttattcatcaaaagtgtcaacgaaat 34825437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 35137560 - 35137592
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||| |||||||||||||    
T  35137560 ctaaatcttattcatcaaacgtgtcaacgaaat 35137592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 37359912 - 37359848
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttat 181  Q
    ||||||||||| | ||||||||||  ||||||||||||| ||||||||  || |||||| |||||    
T  37359912 taggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaccctttaattttat 37359848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 39908768 - 39908736
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||| ||||||||||||    
T  39908768 ctaaatcttattcatcaaaattgtcaacgaaat 39908736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 41282927 - 41282871
Alignment:
Q  133 tacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||| ||| |||||||||||||| ||||||||  | |||||||||| ||||||||||    
T  41282927 tacatccaatatatttgagtgtaccggtacacctattctttaaattaatagttaaat 41282871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 44522145 - 44522177
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  44522145 ctaaatcttattcatcaaaagtgttaacgaaat 44522177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 44653299 - 44653331
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  44653299 ctaaatcttattcatcaaaagtgttaacgaaat 44653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 268
Target Start/End: Complemental strand, 48825686 - 48825658
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacg 268  Q
    |||||||||||||||||||||||||||||    
T  48825686 ctaaatcttattcatcaaaagtgtcaacg 48825658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 51756375 - 51756343
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||| ||||||||||    
T  51756375 ctaaatcttattcatcaaaagtatcaacgaaat 51756343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 164
Target Start/End: Original strand, 54008898 - 54008950
Alignment:
Q  112 taaaataggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||| |||||||||| |||||||||||| |  ||||| ||||||||||||||    
T  54008898 taaaaaaggcaaattctatggtacacccaatgaatttgggtgtatcggtacac 54008950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 122 - 174
Target Start/End: Complemental strand, 55059587 - 55059535
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactcttta 174  Q
    |||||| |||||||| | | |||||||||||||| ||||||||||||| ||||    
T  55059587 aaattctatggtacatctaatatatttgagtgtaccggtacactcacttttta 55059535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 55365785 - 55365737
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    |||||||||||| |||||||| ||| || ||||| ||||||||||||||    
T  55365785 ataggcaaattctatggtacatccaataaatttgggtgtatcggtacac 55365737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 61; Significance: 4e-26; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 7211 - 7283
Alignment:
Q  120 gcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  7211 gcaaattctatggtacacccattatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 7283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 7335 - 7367
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  7335 ctaaatcttattcatcaaaagtgtcaacgaaat 7367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 9910452 - 9910376
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  9910452 ataggcaaattctatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 9910376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 33678148 - 33678228
Alignment:
Q  112 taaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||| |||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  33678148 taaaaaaggcaaattctatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 33678228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 480081 - 480008
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  480081 ggcaaattttatggtacatccagtatatttgagtgtatcggtacactcactctttaaattaatagttaaatgag 480008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 9604839 - 9604767
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    ||||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  9604839 ggcaaattctatgatacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatga 9604767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 29959877 - 29959952
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||||| | |||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  29959877 taggcaaattctatggtacacctaatatatttgagtgtatcagtacactcactctttaaattaatggttaaatgag 29959952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 33210372 - 33210443
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  33210372 caaattctatggtacacccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgag 33210443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 8258395 - 8258465
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||||||||||    
T  8258395 aaattctatggtacacccactatatttgagtgtaccggtacacgcactctttaaattcatagttaaatgag 8258465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 36339253 - 36339180
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| ||||||||||| |||||||||| || ||||||||||    
T  36339253 ggcaaattctatggtacacccaatatatttgagtgtaccggtacactcattctttaaattaatggttaaatgag 36339180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 28318757 - 28318685
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    ||||||||  |||||||||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  28318757 ggcaaattttatggtacacccactatatttgagtgtactggtacactcactctttaaattcatagttaaatga 28318685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 38293620 - 38293696
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| |||||||| ||| ||||||||||||| ||  ||||||||||||||||||| |||||||||||||    
T  38293620 ataggcaaattctatggtacatccaatatatttgagtgtgtcaatacactcactctttaaattaatagttaaatgag 38293696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 2851688 - 2851763
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| | |||||||||| |||||||||||||| || |||||||||| |||||||| |||||||||||||    
T  2851688 taggcaaattcaacggtacacccactatatttgagtgtaccgatacactcactttttaaattcatagttaaatgag 2851763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 9913582 - 9913512
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| || |||||||||||||||||||||||| || ||||||||||||||||| | |||||||||||||    
T  9913582 aaattctatagtacacccattatatttgagtgtaccgatacactcactctttaaactcatagttaaatgag 9913512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 27979014 - 27979086
Alignment:
Q  120 gcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| ||| |||| ||| |||||||||||||||||||||||| |||||||||||| || ||||||||||    
T  27979014 gcaaattctatgatacatccaatatatttgagtgtatcggtacacttactctttaaattaatggttaaatgag 27979086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 13118800 - 13118871
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| |||||||| | | ||||||| |||||| |||||||||||||||||||||| ||||||||||    
T  13118800 aggcaaattctatggtacatctaatatatttaagtgtaccggtacactcactctttaaattaatagttaaat 13118871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 191
Target Start/End: Original strand, 4616698 - 4616772
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    ||||||||||  |||||||| | | |||||||||||||| ||||||||||| |||||||||| ||||||||||||    
T  4616698 taggcaaattatatggtacatctaatatatttgagtgtaccggtacactcattctttaaattaatagttaaatga 4616772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 25929560 - 25929630
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||| |||||||||||| ||||||||||||||  |||| || ||||||||||||| ||||||||||    
T  25929560 ggcaaattctatggtacacccaatatatttgagtgtacgggtatacccactctttaaattaatagttaaat 25929630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 40803318 - 40803392
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| ||||||||  || |||||||||||||| || |||||||||| |||||||| |||||||||||||    
T  40803318 aggcaaattctatggtacattcactatatttgagtgtaccgatacactcactttttaaattcatagttaaatgag 40803392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 42597883 - 42597810
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||| | || ||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  42597883 aggcaaattctatggtacatc-atcatatttgagtgtaccggtacactcattctttaaattcatagttaaatgag 42597810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 3024559 - 3024496
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| ||| ||||||||||||||   ||||| ||||||||||||||||||||||||||||    
T  3024559 atggtacatccactatatttgagtgtactagtacattcactctttaaatttatagttaaatgag 3024496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 113 - 191
Target Start/End: Original strand, 9629900 - 9629978
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    |||| |||||||||| |||||||||  | |||||||||||||| || |||||| |||||||||||| ||| ||||||||    
T  9629900 aaaaaaggcaaattctatggtacacttaatatatttgagtgtaccgttacactaactctttaaattaataattaaatga 9629978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 36428311 - 36428241
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||| ||| |||||||||||||| |||||||  ||||||||||| | |||||||||||||    
T  36428311 aaattctatggtacatccaatatatttgagtgtaccggtacatccactctttaaactaatagttaaatgag 36428241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 118 - 167
Target Start/End: Complemental strand, 32993734 - 32993685
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactca 167  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||||||    
T  32993734 aggcaaattctatggtacacccaatatatttgagtgtaccggtacactca 32993685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 701943 - 702014
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||||||| | ||||| |||||| |   |||||||||||||||||||| |||||||||||||    
T  701943 caaattctatggtacacctaatatatatgagtgcactcgtacactcactctttaaattaatagttaaatgag 702014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 13126980 - 13127053
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| | | ||||||| |||||| ||||| ||| |||||||||||| || ||||||||||    
T  13126980 ggcaaattctatggtacatctaatatatttaagtgtaccggtatacttactctttaaattaatggttaaatgag 13127053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 35370784 - 35370735
Alignment:
Q  142 tatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    |||||||||||||| | | |||||||||||||||||| ||||||||||||    
T  35370784 tatatttgagtgtaccaggacactcactctttaaattcatagttaaatga 35370735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 40563527 - 40563454
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||  ||||||||| || |||||||||||| |  ||||||||||||||||| | | |||||||||||||    
T  40563527 ggcaaattttatggtacactcaatatatttgagtgcactggtacactcactctttagaataatagttaaatgag 40563454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 479956 - 479924
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  479956 ctaaatcttattcatcaaaagtgtcaacgaaat 479924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 702065 - 702097
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  702065 ctaaatcttattcatcaaaagtgtcaacgaaat 702097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 8258518 - 8258550
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  8258518 ctaaatcttattcatcaaaagtgtcaacgaaat 8258550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 22798480 - 22798432
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    |||||||||||| |||||||||||| || ||||| ||||||||||||||    
T  22798480 ataggcaaattctatggtacacccaataaatttgggtgtatcggtacac 22798432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 33678280 - 33678312
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  33678280 ctaaatcttattcatcaaaagtgtcaacgaaat 33678312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 42597758 - 42597726
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  42597758 ctaaatcttattcatcaaaagtgtcaacgaaat 42597726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 6560828 - 6560898
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||||||||| || |||||||||||| |||||||  | || ||||||| |||||||||||||    
T  6560828 caaattctatggtacacccaata-atttgagtgtattggtacaccaaatccttaaattaatagttaaatgag 6560898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 14435101 - 14435070
Alignment:
Q  241 taaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||||||||    
T  14435101 taaatcttattcatcaaaagtgtcaacgaaat 14435070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 21605650 - 21605720
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| ||||||||||||  | |||||||||||| |||||||  | |||||||||| |||||||||||||    
T  21605650 caaattctatggtacacccaaca-atttgagtgtattggtacaccaaatctttaaattaatagttaaatgag 21605720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 25684071 - 25684118
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||||| |||||||||||| || ||||| ||||||||||||||    
T  25684071 taggcaaattctatggtacacccaataaatttgggtgtatcggtacac 25684118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 30753860 - 30753785
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||  |||||||| ||| |||||||  ||| | |  ||||||||||||||||||| |||||||||||||    
T  30753860 taggcaaattttatggtacatccaatatatttaggtgcaccaatacactcactctttaaattaatagttaaatgag 30753785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 42487009 - 42486942
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||| |||||||| | | |||||||||||||| || ||||| |||| |||||||| ||||||||||    
T  42487009 aaattctatggtacaactaatatatttgagtgtaccgctacacccactttttaaattaatagttaaat 42486942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 34302645 - 34302718
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||||| || |||||||||||| ||||||   | || ||||||| |||||||||||||    
T  34302645 aggcaaattctatggtacacccaata-atttgagtgtattggtacatcaaatccttaaattaatagttaaatgag 34302718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 270
Target Start/End: Complemental strand, 36428189 - 36428159
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaa 270  Q
    |||||||||||||||||||||||||||||||    
T  36428189 ctaaatcttattcatcaaaagtgtcaacgaa 36428159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 165
Target Start/End: Complemental strand, 37314244 - 37314198
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacact 165  Q
    ||||||||| |||||||||||| || ||||| |||||||||||||||    
T  37314244 ggcaaattctatggtacacccaataaatttgggtgtatcggtacact 37314198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 273
Target Start/End: Complemental strand, 19518338 - 19518305
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaatg 273  Q
    ||||||||||||||| ||||||||||||||||||    
T  19518338 ctaaatcttattcattaaaagtgtcaacgaaatg 19518305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 185
Target Start/End: Complemental strand, 39041720 - 39041667
Alignment:
Q  132 gtacacccattatatttgagtgtatcggtacactcactctttaaatttatagtt 185  Q
    |||||| || ||||||||||||||| |||||||| | || ||||||||||||||    
T  39041720 gtacactcaatatatttgagtgtattggtacactaaatccttaaatttatagtt 39041667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 43237759 - 43237687
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| || |||||||||||| |||||||  | |  ||||||| |||||||||||||    
T  43237759 ggcaaattctatggtacacccaata-atttgagtgtattggtacaccaaattcttaaattaatagttaaatgag 43237687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 4616823 - 4616855
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  4616823 ctaaatcttattcatcaaaagtgttaacgaaat 4616855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 5359849 - 5359881
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||| ||||||||||||||||||    
T  5359849 ctaaatcttattcaacaaaagtgtcaacgaaat 5359881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 9604714 - 9604682
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||| |||||    
T  9604714 ctaaatcttattcatcaaaagtgtcaaagaaat 9604682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 13127103 - 13127135
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  13127103 ctaaatcttattcatcaaaagtgttaacgaaat 13127135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 28318631 - 28318599
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||| ||||||||||||||||||||||    
T  28318631 ctaaatcttactcatcaaaagtgtcaacgaaat 28318599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 30753733 - 30753701
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||| ||||||||||||||||||||||||||    
T  30753733 ctaaattttattcatcaaaagtgtcaacgaaat 30753701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 87)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 47544293 - 47544368
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  47544293 taggcaaattctatggtacacccactatatttgagtgtaacggtacactcactctttaaattcatagttaaatgag 47544368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 477841 - 477768
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  477841 ggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgag 477768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 52861704 - 52861632
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    ||||||| | |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  52861704 ggcaaatcctatggtacacccactatatttgagtgtaccggtacactcactctttaaatttatagttaaatga 52861632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 113 - 192
Target Start/End: Complemental strand, 34038577 - 34038498
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  34038577 aaaataggcaaattctatggtacatccaatatatttgagtgtattggtacactcactttttaaattaatagttaaatgag 34038498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 35874346 - 35874275
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  35874346 aggcaaattctatggtacacccaatatatttgagtgtattggtacactcactctttaaattaatagttaaat 35874275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 17554225 - 17554151
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  17554225 aggcaaattctatggtacacccaatatatttgagtgtaccggtacactcactctttaaattaatggttaaatgag 17554151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 48760120 - 48760198
Alignment:
Q  114 aaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||||| |||||||||||| |||||||||||||||  ||||||| |||||||||||| |||||||||||||    
T  48760120 aaataggcaaattctatggtacacccactatatttgagtgtattagtacactaactctttaaattcatagttaaatgag 48760198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 44263640 - 44263719
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||| |||||||||| |||||||||||| ||||||||||||||| | ||||||| ||||||||||| |||||||||||||    
T  44263640 aaaaaaggcaaattctatggtacacccaatatatttgagtgtattgatacactcgctctttaaattaatagttaaatgag 44263719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 24381315 - 24381389
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||| | || ||||||||||| |||||||||||||||||||||| |||||||||||||    
T  24381315 aggcaaattctatggtacacctaatagatttgagtgtaccggtacactcactctttaaattaatagttaaatgag 24381389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 2249973 - 2249900
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| ||||||||||||||| |||| |||||||||||||||| |||||||||||||    
T  2249973 ggcaaattctatggtacatccactatatttgagtgtattggtatactcactctttaaattcatagttaaatgag 2249900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 6526835 - 6526762
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| || ||||||||||| ||||||| |||||||||||||    
T  6526835 ggcaaattctatggtacacccaatatatttgagtgtaccgatacactcactccttaaattaatagttaaatgag 6526762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 30321298 - 30321225
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||| | || |||||||||||||    
T  30321298 ggcaaattctatggtacacccattatatttgagtgtaccggtatactcactcttttacttcatagttaaatgag 30321225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 10348434 - 10348360
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||| ||||||| |||||||||||||| |||||||||||||| ||||||| |||||||||||||    
T  10348434 taggcaaattctatgggacacccactatatttgagtgtaccggtacactcactc-ttaaattcatagttaaatgag 10348360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 45622892 - 45622821
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| |||||||| ||| |||||||||||||| | |||||||||||||||||||| ||||||||||    
T  45622892 aggcaaattctatggtacatccactatatttgagtgtaccagtacactcactctttaaattcatagttaaat 45622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 8396352 - 8396430
Alignment:
Q  114 aaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||||| |  |||||| || |||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  8396352 aaataggcaaattctacagtacactcactatatttgagtgtaccggtacattcactctttaaattcatagttaaatgag 8396430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 38717753 - 38717827
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||||| ||||||||||||||   ||||||| |||||||||||| |||||||||||||    
T  38717753 aggcaaattctatggtacacccactatatttgagtgtactagtacactaactctttaaattcatagttaaatgag 38717827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 46234831 - 46234901
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||||||| |||||||||||||| || ||||||||||||||||||| || ||||||||||    
T  46234831 aaattctatggtacacccaatatatttgagtgtaccgatacactcactctttaaattaatggttaaatgag 46234901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 48977283 - 48977213
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||| ||||||||| || |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  48977283 ggcaaattctatggtacactcaatatatttgagtgtaccggtacacccactctttaaattaatagttaaat 48977213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 8 - 98
Target Start/End: Complemental strand, 7889356 - 7889266
Alignment:
Q  8 cgaagaatatcattggtatgcagagtttatattcatgatcnnnnnnnngttttgttaagtaattaccnnnnnnngaatatttgcacatatt 98  Q
    ||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||       |||||||||||||||||    
T  7889356 cgaagaatatcattggtatgcagagtttatattcatgatcttttttttgttttgttaagtaattacctttttttgaatatttgcacatatt 7889266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 24003827 - 24003754
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| |||||||||||||| ||||||||||| | |||||||| |||||||||||||    
T  24003827 ggcaaattctatggtacatccactatatttgagtgtaccggtacactcattatttaaattcatagttaaatgag 24003754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 51787875 - 51787802
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| |||||||||||||| |||||||| || |||||||||| |||||||||||||    
T  51787875 ggcaaattctatggtacatccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgag 51787802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 32710154 - 32710078
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| |||||||| ||| |||||||||||||| ||||||||||||| |||||||  || ||||||||||    
T  32710154 ataggcaaattctatggtacatccaatatatttgagtgtaccggtacactcactttttaaatcaatggttaaatgag 32710078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 38260800 - 38260872
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||||| |||||||| | | |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  38260800 taggcaaattctatggtacatctaatatatttgagtgtaccggtacacccactctttaaattaatagttaaat 38260872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 51056191 - 51056266
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||| |||||||||| |||||||||| | |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  51056191 aaaaaaggcaaattctatggtacacctaatatatttgagtgtaccggtacac-cactctttaaattaatagttaaat 51056266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 6965930 - 6966005
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||||||| ||||||||||||||   ||||||| ||||||||| || |||||||||||||    
T  6965930 taggcaaattctatggtacacccactatatttgagtgtactagtacactaactctttaatttcatagttaaatgag 6966005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 12907273 - 12907352
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||| |||||||||| |||||| | ||| |||||| ||||||| ||||||||||||| |||||||| |||||||||||||    
T  12907273 aaaaaaggcaaattctatggtatatccactatattcgagtgtaccggtacactcactatttaaattcatagttaaatgag 12907352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 25702866 - 25702791
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| || |||||  || |||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  25702866 taggcaaattctatagtacattcaatatatttgagtgtaccggtacactcactctttagattaatagttaaatgag 25702791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 13203325 - 13203251
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |  ||||||||| | |||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  13203325 aggcaaattctacagtacacccactgtatttgagtgtaccggtacacttactctttaaattcatagttaaatgag 13203251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 32805735 - 32805805
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||| ||| ||||||| ||||||| ||||||||||||||||||||| | |||||||||||    
T  32805735 aaattctatggtacatccactatatttaagtgtattggtacactcactctttaaattcaaagttaaatgag 32805805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 52346005 - 52345935
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| || ||||||||| |||||||||||||| | |||||| ||||||||||||| |||||||||||||    
T  52346005 aaattctattgtacacccaatatatttgagtgtaccagtacacccactctttaaattaatagttaaatgag 52345935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 12105566 - 12105497
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    ||||||||| |||||||||||| |||||||||||||| |  ||||| ||||||||||||| |||||||||    
T  12105566 ggcaaattctatggtacacccaatatatttgagtgtaccaatacacccactctttaaattaatagttaaa 12105497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 31076017 - 31075944
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||| || || ||||||| ||| |||||||||    
T  31076017 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacccattcattaaattaataattaaatgag 31075944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 47693206 - 47693275
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    ||||||||| |||||||||||| |||||||||||||| || ||||  ||||||||||||| |||||||||    
T  47693206 ggcaaattctatggtacacccaatatatttgagtgtaccgatacatccactctttaaattaatagttaaa 47693275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 24230978 - 24230907
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| |||||||| ||| ||||||||||||||||||||||| |||  || ||||| ||||||||||    
T  24230978 aggcaaattctatggtacatccaatatatttgagtgtatcggtacacccaccattcaaattaatagttaaat 24230907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 31530719 - 31530649
Alignment:
Q  120 gcaaattccatggtacacccat--tatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    |||||||  ||||||||||||   |||||||||||||| |||||||||||||||||||||| |||||||||    
T  31530719 gcaaattttatggtacacccaaaatatatttgagtgtaacggtacactcactctttaaattaatagttaaa 31530649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 24025073 - 24024999
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| ||| |||||| | |||||||||| ||||| ||| ||||||| |||||||| |||||||||||||    
T  24025073 aggcaaattctatgatacacctactatatttgagagtatcagtatactcactatttaaattcatagttaaatgag 24024999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 118 - 191
Target Start/End: Original strand, 3399147 - 3399222
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacact--cactctttaaatttatagttaaatga 191  Q
    |||||||||| |||||||||| | |||||||||||||  ||||| |||  ||||||||||||| ||||||||||||    
T  3399147 aggcaaattctatggtacacctaatatatttgagtgtgccggtatactaccactctttaaattaatagttaaatga 3399222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 42275742 - 42275670
Alignment:
Q  120 gcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||  |||||||| ||| ||||||||||||||| |||| ||||| | |||||||| |||||||||||||    
T  42275742 gcaaattttatggtacatccaatatatttgagtgtattggtatactcattttttaaattaatagttaaatgag 42275670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 45767681 - 45767737
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactcttt 173  Q
    |||| |||||| |||||||| ||| |||||||||||||||||||| |||||||||||    
T  45767681 taggtaaattctatggtacatccaatatatttgagtgtatcggtatactcactcttt 45767737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 188
Target Start/End: Complemental strand, 14153091 - 14153020
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    ||||||||||| ||||||||| || ||||||||||||||   |||||| |||| |||||||| |||||||||    
T  14153091 taggcaaattctatggtacactcaatatatttgagtgtacatgtacacccactttttaaattaatagttaaa 14153020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 30263987 - 30263916
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||||||||| |||||||||||||| |  |||||  | |||||||||| |||||||||||||    
T  30263987 caaattctatggtacacccaatatatttgagtgtacccatacaccaattctttaaattaatagttaaatgag 30263916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 30896836 - 30896883
Alignment:
Q  142 tatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  30896836 tatatttgagtgtatcggtatacttactctttaaattaatagttaaat 30896883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 189
Target Start/End: Original strand, 21072773 - 21072844
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||||  |||||||||||| || |||||| |||||||||  || ||||||||||||| ||||||||||    
T  21072773 ataggcaaattatatggtacacccaatacatttgactgtatcggt--acccactctttaaattaatagttaaat 21072844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 52180234 - 52180304
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||  |||||||| | | |||||||||||||| |||||||| |||| |||||||| ||||||||||    
T  52180234 ggcaaattttatggtacatctaatatatttgagtgtaccggtacacccactatttaaattaatagttaaat 52180304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 274
Target Start/End: Complemental strand, 52861581 - 52861547
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaatga 274  Q
    |||||||||||||||||||||||||||||||||||    
T  52861581 ctaaatcttattcatcaaaagtgtcaacgaaatga 52861547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 27295058 - 27295130
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| ||||||||||||  | |||||||||||| |||||||  | |||||||||| |||||||||||||    
T  27295058 ggcaaattctatggtacacccaaca-atttgagtgtattggtacaccaaatctttaaattaatagttaaatgag 27295130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 2249870 - 2249838
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  2249870 ctaaatcttattcatcaaaagtgtcaacgaaat 2249838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 7489315 - 7489263
Alignment:
Q  133 tacacccattatatttgagtgtatcggtacactcactctttaaatttatagtt 185  Q
    |||||||| |||||||||||||| || ||||| ||||||||||||| ||||||    
T  7489315 tacacccaatatatttgagtgtaccgatacacccactctttaaattaatagtt 7489263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 7489359 - 7489311
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    |||||||||||| |||||||||||| |||||||||||||| || |||||    
T  7489359 ataggcaaattctatggtacacccaatatatttgagtgtaccgatacac 7489311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 12105443 - 12105411
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  12105443 ctaaatcttattcatcaaaagtgtcaacgaaat 12105411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 12907404 - 12907436
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  12907404 ctaaatcttattcatcaaaagtgtcaacgaaat 12907436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 13203199 - 13203167
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  13203199 ctaaatcttattcatcaaaagtgtcaacgaaat 13203167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 24003703 - 24003671
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  24003703 ctaaatcttattcatcaaaagtgtcaacgaaat 24003671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 28624600 - 28624632
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  28624600 ctaaatcttattcatcaaaagtgtcaacgaaat 28624632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 30571132 - 30571164
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  30571132 ctaaatcttattcatcaaaagtgtcaacgaaat 30571164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 31075893 - 31075861
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  31075893 ctaaatcttattcatcaaaagtgtcaacgaaat 31075861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 32805856 - 32805888
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  32805856 ctaaatcttattcatcaaaagtgtcaacgaaat 32805888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 34038448 - 34038416
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  34038448 ctaaatcttattcatcaaaagtgtcaacgaaat 34038416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 46362305 - 46362273
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  46362305 ctaaatcttattcatcaaaagtgtcaacgaaat 46362273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 7427069 - 7427022
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||||| |||||||||||| || ||||| ||||||||||||||    
T  7427069 taggcaaattctatggtacacccaataaatttgggtgtatcggtacac 7427022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 9223268 - 9223217
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||| ||||||||| |||||||||||| || ||||| ||||||||||||||    
T  9223268 aaaattggcaaattctatggtacacccaataaatttgggtgtatcggtacac 9223217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 114 - 185
Target Start/End: Original strand, 12178601 - 12178672
Alignment:
Q  114 aaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagtt 185  Q
    |||||||||||||  | |||||||||| |||||||||||| |||||||||   |  ||||||||||||||||    
T  12178601 aaataggcaaattatacggtacacccaatatatttgagtgcatcggtacatcaaacctttaaatttatagtt 12178672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 49685983 - 49686030
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||||| |||||||||||| || ||||| ||||||||||||||    
T  49685983 taggcaaattctatggtacacccaataaatttgggtgtatcggtacac 49686030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 270
Target Start/End: Complemental strand, 7489206 - 7489176
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaa 270  Q
    |||||||||||||||||||||||||||||||    
T  7489206 ctaaatcttattcatcaaaagtgtcaacgaa 7489176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 16482575 - 16482648
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||||| || |||| ||||||| |||||||  | || ||||||| |||||||||||||    
T  16482575 aggcaaattctatggtacacccaata-atttaagtgtattggtacaccaaatccttaaattaatagttaaatgag 16482648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 24511591 - 24511661
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| | ||||||||||  ||||||||||||| ||||||||  | ||||||| ||||||| ||||||||    
T  24511591 aaattctacggtacacccaacatatttgagtgtaccggtacaccaaatctttaattttataggtaaatgag 24511661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 188
Target Start/End: Original strand, 30571009 - 30571075
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    |||||| |||||||||| | |||||||||||||| || ||||  ||||||||||||| ||| |||||    
T  30571009 aaattctatggtacacctaatatatttgagtgtaccgttacatccactctttaaattaataattaaa 30571075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 51781507 - 51781438
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||||||| || |||||||||||| |||||||  | || ||||||| |||||||||||||    
T  51781507 aaattctatggtacacccaata-atttgagtgtattggtacaccaaatccttaaattaatagttaaatgag 51781438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 922248 - 922176
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| ||||||||||||  | |||||||||||| |||||||  | || ||||||| |||||||||||||    
T  922248 ggcaaattctatggtacacccaaca-atttgagtgtattggtacaccaaatccttaaattaatagttaaatgag 922176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 6329639 - 6329579
Alignment:
Q  131 ggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| ||| ||||||||||||||   ||||| |||||||||||| |||||||||||||||    
T  6329639 ggtacatccaatatatttgagtgtactagtacattcactctttaaa-ttatagttaaatgag 6329579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 269
Target Start/End: Complemental strand, 6526711 - 6526682
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacga 269  Q
    ||||||||||||||||||||||||||||||    
T  6526711 ctaaatcttattcatcaaaagtgtcaacga 6526682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 14131756 - 14131711
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||||    
T  14131756 ggcaaattctatggtacacccaataaatttgggtgtatcggtacac 14131711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Complemental strand, 31821965 - 31821916
Alignment:
Q  143 atatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||||||||||| | | | |||||||||| |||||||||||||    
T  31821965 atatttgagtgtatcggtatatttattctttaaattcatagttaaatgag 31821916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 35534285 - 35534233
Alignment:
Q  112 taaaataggcaaattccatggtacacccattatatttgagtgtatcggtacact 165  Q
    ||||| |||||||||| |||||||||||| ||| |||||||||| |||||||||    
T  35534285 taaaaaaggcaaattctatggtacacccaatat-tttgagtgtaccggtacact 35534233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 43225052 - 43225007
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||||    
T  43225052 ggcaaattctatggtacacccaataaatttgggtgtatcggtacac 43225007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 477718 - 477686
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  477718 ctaaatcttattcatcaaaagtgttaacgaaat 477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 6329534 - 6329502
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||| ||||||||||||||||||||||||||    
T  6329534 ctaaattttattcatcaaaagtgtcaacgaaat 6329502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 9587766 - 9587798
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||| |||||||||||||||||||    
T  9587766 ctaaatcttattcgtcaaaagtgtcaacgaaat 9587798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 10348308 - 10348276
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||| |||||||||||||    
T  10348308 ctaaatcttattcatcaaacgtgtcaacgaaat 10348276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 21882929 - 21882961
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||| ||||||||||||||||||||||||||    
T  21882929 ctaaatattattcatcaaaagtgtcaacgaaat 21882961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 25702740 - 25702708
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||| |||||||||||||||||    
T  25702740 ctaaatcttattcattaaaagtgtcaacgaaat 25702708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 30321174 - 30321142
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||| |||||||||||||    
T  30321174 ctaaatcttattcatcaaacgtgtcaacgaaat 30321142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 31821866 - 31821834
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||| |||||||||    
T  31821866 ctaaatcttattcatcaaaagtgccaacgaaat 31821834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 45622767 - 45622735
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||| ||||||||||    
T  45622767 ctaaatcttattcatcaaaagtatcaacgaaat 45622735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 46234955 - 46234987
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  46234955 ctaaatcttattcatcaaaagtgttaacgaaat 46234987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 51787751 - 51787719
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||| ||||||||||||||||||||||||    
T  51787751 ctaaatctgattcatcaaaagtgtcaacgaaat 51787719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 268
Target Start/End: Complemental strand, 52345884 - 52345856
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacg 268  Q
    |||||||||||||||||||||||||||||    
T  52345884 ctaaatcttattcatcaaaagtgtcaacg 52345856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 6e-25; HSPs: 56)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 37676345 - 37676271
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  37676345 aggcaaattctatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 37676271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 117809 - 117882
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  117809 ggcaaattctatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 117882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 26522375 - 26522300
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||  |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  26522375 taggcaaattatatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 26522300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 34633865 - 34633936
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34633865 caaattctatgatacacccaatatatttgagtgtatcggtacactcactctttaaattaatagttaaatgag 34633936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 36667231 - 36667306
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  36667231 taggcaaattatatggtacatccattatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 36667306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 41720250 - 41720320
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  41720250 aaattctatggtacacccactatatttgagtgtatcggtacacccactctttaaattcatagttaaatgag 41720320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 1043060 - 1043128
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  1043060 caaattctatggtacacccaatatatttgagtgtatcggtacacccactctttaaattaatagttaaat 1043128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 29454618 - 29454546
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  29454618 taggcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatagttaaat 29454546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 40267479 - 40267550
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||||| |||||||||||||    
T  40267479 caaattctatggtacacccactatatttgagtgtaccggtacacccactctttaaattcatagttaaatgag 40267550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 4214904 - 4214832
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||| || ||||||||||||| ||||||||||    
T  4214904 taggcaaattctatggtacacccaatatatttgagtgtaccggtatacccactctttaaattaatagttaaat 4214832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 26988784 - 26988724
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||    
T  26988784 atggtacacccaatatatttgagtgtatcggtacactcattctttaaattaatagttaaat 26988724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 27847512 - 27847582
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||||| | |||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  27847512 aaattctatggtacacctactatatttgagtgtaccgatacactcactctttaaattcatagttaaatgag 27847582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 109 - 189
Target Start/End: Complemental strand, 6631323 - 6631242
Alignment:
Q  109 atataaaata-ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| ||||||||| |||||||||||| |||||||||||||| ||||| || || |||||||||| ||||||||||    
T  6631323 atataaaataaggcaaattctatggtacacccaatatatttgagtgtaccggtatacccattctttaaattaatagttaaat 6631242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 113 - 190
Target Start/End: Complemental strand, 29266008 - 29265931
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatg 190  Q
    |||||||| |||||  |||||||||||| |||||||||||||||| ||| || ||||||||||||| |||||||||||    
T  29266008 aaaataggtaaattatatggtacacccaatatatttgagtgtatcagtatacccactctttaaattaatagttaaatg 29265931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 109 - 192
Target Start/End: Complemental strand, 2749722 - 2749640
Alignment:
Q  109 atataaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| |||||||||| |||||||||||| |||||||||||||| | |||||  ||||||||||||| || ||||||||||    
T  2749722 atataaaa-aggcaaattctatggtacacccaatatatttgagtgtacctgtacatccactctttaaattaatggttaaatgag 2749640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 2261029 - 2261099
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||| ||||||||| || |||||||||||||| |||||||| ||||||||||||| ||| ||||||    
T  2261029 ggcaaattctatggtacactcaatatatttgagtgtaccggtacacccactctttaaattaataattaaat 2261099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 40578696 - 40578766
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||| ||| ||||||| ||||||| |||| |||||||||||||||| |||||||||||||    
T  40578696 aaattctatggtacatccactatatttaagtgtattggtatactcactctttaaattcatagttaaatgag 40578766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 44542225 - 44542148
Alignment:
Q  114 aaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    |||||||||||||  ||||||||  || ||||||||||||||| | || |||||||||||||||| ||||||||||||    
T  44542225 aaataggcaaattttatggtacattcaatatatttgagtgtattgatatactcactctttaaattaatagttaaatga 44542148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 36162189 - 36162261
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatg 190  Q
    |||||||||| || ||||||||| |||||||||||||| | |||||  ||||||||||||| |||||||||||    
T  36162189 aggcaaattctatagtacacccaatatatttgagtgtaccagtacatccactctttaaattaatagttaaatg 36162261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 39300497 - 39300422
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||||||| ||||||||| ||||  | ||||  ||||||||||||| |||||||||||||    
T  39300497 taggcaaattctatggtacacccaatatatttgaatgtactgctacatccactctttaaattaatagttaaatgag 39300422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Complemental strand, 38329844 - 38329783
Alignment:
Q  131 ggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| ||| |||||||||||||| ||||||| | |||||||||||| |||||||||||||    
T  38329844 ggtacatccaatatatttgagtgtaccggtacatttactctttaaattaatagttaaatgag 38329783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 9497538 - 9497609
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatg 190  Q
    ||||||||| ||||||||  || ||||||||| |||| ||||||| ||| |||||||||| |||||||||||    
T  9497538 ggcaaattctatggtacattcaatatatttgaatgtaccggtacattcattctttaaattaatagttaaatg 9497609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 189
Target Start/End: Complemental strand, 40777022 - 40776955
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||| ||||||||||||  ||||||||||||||  ||||| ||||| |||||||| ||||||||||    
T  40777022 aaattctatggtacacccaaaatatttgagtgtattcgtacattcactttttaaattaatagttaaat 40776955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 37511087 - 37511160
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| ||||||||||||  | |||||||||||| |||||||  | |||||||||| |||||||||||||    
T  37511087 aggcaaattcgatggtacacccaaca-atttgagtgtattggtacaccaaatctttaaattaatagttaaatgag 37511160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 148 - 189
Target Start/End: Complemental strand, 7128469 - 7128428
Alignment:
Q  148 tgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||| |||||||||||||||||||||| ||||||||||    
T  7128469 tgagtgtaccggtacactcactctttaaattcatagttaaat 7128428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 6983069 - 6983037
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  6983069 ctaaatcttattcatcaaaagtgtcaacgaaat 6983037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 9497661 - 9497693
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  9497661 ctaaatcttattcatcaaaagtgtcaacgaaat 9497693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 10706839 - 10706807
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  10706839 ctaaatcttattcatcaaaagtgtcaacgaaat 10706807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 36667358 - 36667390
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  36667358 ctaaatcttattcatcaaaagtgtcaacgaaat 36667390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 45210411 - 45210443
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  45210411 ctaaatcttattcatcaaaagtgtcaacgaaat 45210443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 112 - 191
Target Start/End: Original strand, 29773438 - 29773516
Alignment:
Q  112 taaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    |||| ||||||||||| ||||||||||||  | |||||||||||| |||||||  | || ||||||| ||||||||||||    
T  29773438 taaactaggcaaattctatggtacacccaaca-atttgagtgtattggtacaccaaatccttaaattaatagttaaatga 29773516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 40267605 - 40267636
Alignment:
Q  241 taaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||||||||    
T  40267605 taaatcttattcatcaaaagtgtcaacgaaat 40267636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Original strand, 40578817 - 40578848
Alignment:
Q  241 taaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||||||||    
T  40578817 taaatcttattcatcaaaagtgtcaacgaaat 40578848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 115 - 192
Target Start/End: Complemental strand, 24938001 - 24937923
Alignment:
Q  115 aataggcaaattccatggtacacccattatatttgagtgtat-cggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| ||||| ||  ||||||||| ||||||||||||||| ||||||||  |  ||||||||||||| |||||||||    
T  24938001 aataggaaaatttcaccgtacacccaatatatttgagtgtatccggtacaccaaacctttaaatttataattaaatgag 24937923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 270
Target Start/End: Complemental strand, 39300368 - 39300338
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaa 270  Q
    |||||||||||||||||||||||||||||||    
T  39300368 ctaaatcttattcatcaaaagtgtcaacgaa 39300338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 170
Target Start/End: Original strand, 464250 - 464299
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactc 170  Q
    ||||||| |||||||||||| || ||||| ||||||||||||||| ||||    
T  464250 caaattctatggtacacccaataaatttgggtgtatcggtacactaactc 464299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 17096691 - 17096643
Alignment:
Q  115 aataggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||||||| ||||||||||||  || |||||||||||||||||||    
T  17096691 aataggcaaattctatggtacacccaacat-tttgagtgtatcggtacac 17096643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 28090192 - 28090264
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| || |||||||| ||| |||||||  | || ||||||| |||||||||||||    
T  28090192 ggcaaattctatggtacacccaata-atttgagtatattggtacaccaaatccttaaattaatagttaaatgag 28090264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 29565756 - 29565711
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||||    
T  29565756 ggcaaattctatggtacacccaataaatttgggtgtatcggtacac 29565711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 192
Target Start/End: Original strand, 35587970 - 35588019
Alignment:
Q  143 atatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||||| ||||||||| || |||||| ||||||| ||||||||    
T  35587970 atatttgagtgtaccggtacactaaccctttaattttataggtaaatgag 35588019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 38329880 - 38329839
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtaca 163  Q
    |||||| |||||||||||| |||||||||||||| |||||||    
T  38329880 aaattctatggtacacccaatatatttgagtgtaccggtaca 38329839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 2749591 - 2749559
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  2749591 ctaaatcttattcatcaaaagtgttaacgaaat 2749559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 5328722 - 5328754
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||| ||||    
T  5328722 ctaaatcttattcatcaaaagtgtcaaccaaat 5328754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 6631189 - 6631157
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||| |||||||||    
T  6631189 ctaaatcttattcatcaaaagtggcaacgaaat 6631157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 118 - 154
Target Start/End: Complemental strand, 10706956 - 10706920
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgt 154  Q
    |||||||||| |||||||||||| |||||||||||||    
T  10706956 aggcaaattctatggtacacccaatatatttgagtgt 10706920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 15726298 - 15726227
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||||| |||||||| ||| || |||||||||||| |||||||  | || ||||||| ||||||||||    
T  15726298 taggcaaattctatggtacatccaata-atttgagtgtattggtacaccaaatccttaaattaatagttaaat 15726227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 26522250 - 26522218
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||| ||||||||||||||||||||||||||    
T  26522250 ctaaattttattcatcaaaagtgtcaacgaaat 26522218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 132 - 192
Target Start/End: Original strand, 27171927 - 27171987
Alignment:
Q  132 gtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||  ||||||||||||| ||||||||  |  | |||||||||||||||||||||    
T  27171927 gtacacccaacatatttgagtgtaccggtacaccaaaccgttaaatttatagttaaatgag 27171987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 268
Target Start/End: Complemental strand, 29265875 - 29265847
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacg 268  Q
    |||||||||||||||||||||||||||||    
T  29265875 ctaaatcttattcatcaaaagtgtcaacg 29265847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 34166193 - 34166161
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||| |||||    
T  34166193 ctaaatcttattcatcaaaagtgtcaatgaaat 34166161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 34633987 - 34634019
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  34633987 ctaaatcttattcatcaaaagtgttaacgaaat 34634019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 268
Target Start/End: Original strand, 36162315 - 36162343
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacg 268  Q
    |||||||||||||||||||||||||||||    
T  36162315 ctaaatcttattcatcaaaagtgtcaacg 36162343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 37676220 - 37676188
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||| |||||    
T  37676220 ctaaatcttattcatcaaaagtgtcaaagaaat 37676188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 38329733 - 38329701
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||| ||||    
T  38329733 ctaaatcttattcatcaaaagtgtcaacaaaat 38329701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 43842250 - 43842178
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    ||||||||  |||||||| | | |||||||||||||| || |||||||| |||||||||| ||  ||||||||    
T  43842250 ggcaaattatatggtacatctaatatatttgagtgtaccgttacactcattctttaaattaattattaaatga 43842178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 44542092 - 44542060
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||| |||||||||||||||||||||||||    
T  44542092 ctaaatcatattcatcaaaagtgtcaacgaaat 44542060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 6e-25; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 114 - 192
Target Start/End: Complemental strand, 23059181 - 23059103
Alignment:
Q  114 aaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  23059181 aaataggaaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatcgttaaatgag 23059103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 45693034 - 45692958
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  45693034 ataggcaaattctatggtacacccactatatttgagtgtaccggtacactcactctttaacttcatagttaaatgag 45692958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 116 - 192
Target Start/End: Complemental strand, 48647431 - 48647355
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||||    
T  48647431 ataggcaaattctatggtacacccaatatatttgagtgtaccggtacactcactctttagattaatagttaaatgag 48647355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 50732859 - 50732934
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||| ||| |||||||||||||||||||||||||||| || ||||| |||||||||||||    
T  50732859 taggcaaattctatggtacatccactatatttgagtgtatcggtacactcacttttgaaattcatagttaaatgag 50732934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 56104810 - 56104735
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||| ||| ||||||| |||||| |||||||||||||||||||||| |||||||||||||    
T  56104810 taggcaaattctatggtacatccaatatatttaagtgtaccggtacactcactctttaaattaatagttaaatgag 56104735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 582767 - 582841
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||  |||||||||||| |||||||||||||| |||||||||||||| ||||||| |||||||||||||    
T  582767 aggcaaattttatggtacacccactatatttgagtgtaccggtacactcactcattaaattcatagttaaatgag 582841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 27990947 - 27990873
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||| | |||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  27990947 aggcaaattctatggtacacctactatatttgagtgtaccggtacactcattctttaaattcatagttaaatgag 27990873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 1856801 - 1856874
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| | |||||||||||| |||||||||||| ||||||||| |||||||||||||    
T  1856801 ggcaaattctatggtacacccactgtatttgagtgtaccggtacactcacgctttaaattcatagttaaatgag 1856874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 50383736 - 50383663
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||  |||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  50383736 ggcaaattatatggtacatccaatatatttgagtgtaccggtacactcactctttaaattaatagttaaatgag 50383663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 53936919 - 53936846
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||| || |||||||||| |||||||||||||    
T  53936919 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgag 53936846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 126579 - 126655
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| | ||||||| || |||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  126579 ataggcaaattctacggtacactcactatatttgagtgtaccggtacattcactctttaaattcatagttaaatgag 126655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 3763113 - 3763188
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||| | | |||||||||||||||||||||||||||| |||||||| || ||||||||||    
T  3763113 taggcaaattctatggtacatctaatatatttgagtgtatcggtacactcactttttaaattaatggttaaatgag 3763188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 4720487 - 4720561
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| ||||||||||||  ||||||||||||| ||||| || ||||||||||||| |||||||||||||    
T  4720487 aggcaaattctatggtacacccacgatatttgagtgtaccggtagacccactctttaaattcatagttaaatgag 4720561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 24535893 - 24535819
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||  |||||||||||| |||||||||||||| |||||  ||||||||||||||| |||||||||||||    
T  24535893 aggcaaattatatggtacacccactatatttgagtgtaccggtagcctcactctttaaattcatagttaaatgag 24535819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 50607683 - 50607757
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||  |||||||||||| |||||||||||||| |||||||| ||||||||||||| || ||||||||||    
T  50607683 aggcaaattttatggtacacccaatatatttgagtgtaccggtacacgcactctttaaattaatggttaaatgag 50607757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 42177747 - 42177674
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||  ||||| |||||||||||||||| || ||||||||||    
T  42177747 ggcaaattctatggtacacccaatatatttgagtgttccggtatactcactctttaaattaatggttaaatgag 42177674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 54506279 - 54506206
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| | |||||| ||| |||||||||||||| ||||||||||| |||||||||| |||||||||||||    
T  54506279 ggcaaattctacggtacatccactatatttgagtgtaccggtacactcattctttaaattcatagttaaatgag 54506206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 9356791 - 9356716
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||||||| ||||||| ||||||| |||| | ||| |||||||||| |||||||||||||    
T  9356791 taggcaaattctatggtacacccaatatattttagtgtattggtaaattcagtctttaaattaatagttaaatgag 9356716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 12356823 - 12356764
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaa 175  Q
    |||| ||||||| |||||||||||| |||||||||||||| |||||||||||||||||||    
T  12356823 atagtcaaattctatggtacacccactatatttgagtgtaccggtacactcactctttaa 12356764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 121 - 188
Target Start/End: Complemental strand, 24980346 - 24980279
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    ||||||| |||||||||||| |||||||||||||| || ||||| ||||||||||||| |||||||||    
T  24980346 caaattctatggtacacccaatatatttgagtgtaccgatacacccactctttaaattaatagttaaa 24980279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 26117756 - 26117819
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| ||| |||||||||||||||| ||||||||| |||||||||| |||||||||||||    
T  26117756 atggtacatccaatatatttgagtgtatcagtacactcattctttaaattaatagttaaatgag 26117819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 33491568 - 33491498
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||| |||||||| ||| |||||||||||||| |||||||| | ||||||||||| ||||||||||    
T  33491568 ggcaaattctatggtacatccaatatatttgagtgtaccggtacacccgctctttaaattaatagttaaat 33491498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 32289310 - 32289242
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||| ||| |||||| | ||||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  32289310 caaattctatgatacacctaatatatttgagtttattggtacactcactctttaaattaatagttaaat 32289242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 352880 - 352809
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| |||||||| ||| ||||||| |||||| ||||||||  |||||||||||| ||||||||||    
T  352880 aggcaaattctatggtacatccaatatatttaagtgtaccggtacacctactctttaaattaatagttaaat 352809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 27761809 - 27761734
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||||| | |||||||||||||| ||||||||| | |||||||||| | | |||||||||    
T  27761809 taggcaaattctatggtacacctaatatatttgagtgtaccggtacacttattctttaaattaacaattaaatgag 27761734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 33492004 - 33491929
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| | |||||||||| |||||||||||||| ||||||||  || |||||| ||||||| ||||||||    
T  33492004 taggcaaattctacggtacacccaatatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgag 33491929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 43363325 - 43363400
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||  |||||||||| | ||||||||||||||| |||| | || ||||||||||| |||||||||||||    
T  43363325 taggcaaattttatggtacacctaatatatttgagtgtattggtatattcgctctttaaattaatagttaaatgag 43363400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 8256465 - 8256535
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| ||||||||| || ||||||||||||||   ||||||| |||||||||||| |||||||||||||    
T  8256465 aaattctatggtacactcactatatttgagtgtactagtacactaactctttaaattcatagttaaatgag 8256535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 8269883 - 8269953
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| ||||||||| || ||||||||||||||   ||||||| |||||||||||| |||||||||||||    
T  8269883 aaattctatggtacactcactatatttgagtgtactagtacactaactctttaaattcatagttaaatgag 8269953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 43147504 - 43147565
Alignment:
Q  131 ggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| ||| |||||||||||||| |||||||| || |||||||||| |||||||||||||    
T  43147504 ggtacatccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgag 43147565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 122 - 189
Target Start/End: Original strand, 423153 - 423220
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||| || ||||| ||| ||||||||||||||||||||||| || ||||||||||  |||||||||    
T  423153 aaattctatcgtacatccaatatatttgagtgtatcggtacacccattctttaaattagtagttaaat 423220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 5337879 - 5337926
Alignment:
Q  142 tatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||||||||| |||||||||||||||||| | ||||||||||    
T  5337879 tatatttgagtgtatcagtacactcactctttaaactaatagttaaat 5337926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 192
Target Start/End: Complemental strand, 30348556 - 30348498
Alignment:
Q  133 tacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| | |||||||||||||| |||||||||||||||||||||| || ||||||||||    
T  30348556 tacacctaatatatttgagtgta-cggtacactcactctttaaattaatggttaaatgag 30348498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 53389228 - 53389181
Alignment:
Q  145 atttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||||||||||||| | |||||||||| |||||||||||||    
T  53389228 atttgagtgtatcggtacactaaatctttaaattaatagttaaatgag 53389181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 56302832 - 56302903
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| |||||||||||| ||||||||| || | |||||||| |||  |||||||| ||||||||||    
T  56302832 aggcaaattctatggtacacccaatatatttgaatgcaccggtacacccaccatttaaattaatagttaaat 56302903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 189
Target Start/End: Complemental strand, 5971110 - 5971036
Alignment:
Q  115 aataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||||||  |||||||| | | ||||||||| |||| |||||||  ||||||||||||| ||||||||||    
T  5971110 aataggcaaattgtatggtacatcgaatatatttgattgtagcggtacatccactctttaaattaatagttaaat 5971036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 189
Target Start/End: Original strand, 31998725 - 31998798
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggt--acactcactctttaaatttatagttaaat 189  Q
    |||||||||| ||||||||  || |||||||||||||| ||||  |||| ||||||||||||| ||||||||||    
T  31998725 aggcaaattctatggtacaatcaatatatttgagtgtaccggtacacacccactctttaaattaatagttaaat 31998798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 32846061 - 32845987
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||| ||| ||||||||||||||  ||| |||||| |||||||||| |||  ||||||||    
T  32846061 aggcaaattctatggtacatccaatatatttgagtgtactggtccactcattctttaaattaataaataaatgag 32845987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 34828721 - 34828795
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| ||| |||||||| |||||||||||| | ||||| || || |||||||||| | |||||||||||    
T  34828721 aggcaaattctatgatacacccaatatatttgagtgcaccggtatacccattctttaaattaacagttaaatgag 34828795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 50775773 - 50775847
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||||| |||||  | |||||||| ||||| ||||||| ||| |||||||||| || ||||||||||    
T  50775773 aggcaaattccatgatacacataatatatttgggtgtaccggtacattcattctttaaattaatggttaaatgag 50775847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 54996100 - 54996170
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||||| | ||||||||||||||  |||| | |||||||||||||| ||| |||||||||    
T  54996100 aaattctatggtacacctaatatatttgagtgtactggtatattcactctttaaattaataattaaatgag 54996170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 29581967 - 29582039
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| |||||||||||||| ||||||||||  |||||||||| |||  ||||||||    
T  29581967 ggcaaattctatggtacatccaatatatttgagtgta-cggtacactccttctttaaattaataactaaatgag 29582039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 4720592 - 4720624
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  4720592 ctaaatcttattcatcaaaagtgtcaacgaaat 4720624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 26117870 - 26117902
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  26117870 ctaaatcttattcatcaaaagtgtcaacgaaat 26117902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 27990821 - 27990789
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  27990821 ctaaatcttattcatcaaaagtgtcaacgaaat 27990789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 34828845 - 34828877
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  34828845 ctaaatcttattcatcaaaagtgtcaacgaaat 34828877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 45629106 - 45629154
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacact 165  Q
    ||||||||||| |||||||||||| || ||||| |||||||||||||||    
T  45629106 taggcaaattctatggtacacccaataaatttgggtgtatcggtacact 45629154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 48647308 - 48647276
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  48647308 ctaaatcttattcatcaaaagtgtcaacgaaat 48647276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 50383613 - 50383581
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  50383613 ctaaatcttattcatcaaaagtgtcaacgaaat 50383581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 50732988 - 50733020
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  50732988 ctaaatcttattcatcaaaagtgtcaacgaaat 50733020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 56104684 - 56104652
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  56104684 ctaaatcttattcatcaaaagtgtcaacgaaat 56104652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 24980223 - 24980192
Alignment:
Q  241 taaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||||||||    
T  24980223 taaatcttattcatcaaaagtgtcaacgaaat 24980192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 32289192 - 32289161
Alignment:
Q  241 taaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||||||||    
T  32289192 taaatcttattcatcaaaagtgtcaacgaaat 32289161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 38008163 - 38008226
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||  ||||||||| |||| ||||||||||||| |||||||  || ||||||||||    
T  38008163 atggtacacccgatatatttgaatgtaccggtacactcactttttaaatcaatggttaaatgag 38008226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 52607852 - 52607821
Alignment:
Q  241 taaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||||||||    
T  52607852 taaatcttattcatcaaaagtgtcaacgaaat 52607821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 21514988 - 21515034
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    |||||||||| |||||||||||| || ||||| ||||||||||||||    
T  21514988 aggcaaattctatggtacacccaataaatttgggtgtatcggtacac 21515034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 272
Target Start/End: Complemental strand, 24535765 - 24535735
Alignment:
Q  242 aaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||    
T  24535765 aaatcttattcatcaaaagtgtcaacgaaat 24535735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 43734855 - 43734933
Alignment:
Q  114 aaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||||  ||||||||  || ||||||||||| || |||||||  || | |||||||| |||||||||||||    
T  43734855 aaataggcaaattatatggtacattcaatatatttgagtttaccggtacatccattatttaaattaatagttaaatgag 43734933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 43735126 - 43735204
Alignment:
Q  114 aaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||||  ||||||||  || ||||||||||| || |||||||  || | |||||||| |||||||||||||    
T  43735126 aaataggcaaattatatggtacattcaatatatttgagtttaccggtacatccattatttaaattaatagttaaatgag 43735204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 46222402 - 46222356
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    |||||||||| |||||||||||| || ||||| ||||||||||||||    
T  46222402 aggcaaattctatggtacacccaataaatttgggtgtatcggtacac 46222356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 3716325 - 3716397
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| || |||||||||||| |||||||  | || ||||||| |||||||||||||    
T  3716325 ggcaaattctatggtacatccaata-atttgagtgtattggtacaccaaatccttaaattaatagttaaatgag 3716397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 54505973 - 54505928
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||||    
T  54505973 ggcaaattctatggtacacccaataaatttgggtgtatcggtacac 54505928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 582892 - 582924
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  582892 ctaaatcttattcatcaaaagtgtaaacgaaat 582924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 3763238 - 3763270
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  3763238 ctaaatcttattcatcaaaagtgttaacgaaat 3763270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 23059051 - 23059019
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||| ||||    
T  23059051 ctaaatcttattcatcaaaagtgtcaacaaaat 23059019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 27761683 - 27761651
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||| ||||    
T  27761683 ctaaatcttattcatcaaaagtgtcaacaaaat 27761651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 29364303 - 29364335
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||| |||||    
T  29364303 ctaaatcttattcatcaaaagtgtcaatgaaat 29364335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 36569645 - 36569693
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    |||||||||||  |||||||||||| || ||||| ||||||||||||||    
T  36569645 ataggcaaattatatggtacacccaataaatttgggtgtatcggtacac 36569693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 38008277 - 38008309
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  38008277 ctaaatcttattcatcaaaagtgttaacgaaat 38008309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 43147611 - 43147643
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||| ||||    
T  43147611 ctaaatcttattcatcaaaagtgtcaacaaaat 43147643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 43363450 - 43363482
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||| ||||||||||||    
T  43363450 ctaaatcttattcatcaaaaatgtcaacgaaat 43363482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 43735252 - 43735284
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||| ||||||||||||||    
T  43735252 ctaaatcttattcatcaagagtgtcaacgaaat 43735284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 45692906 - 45692874
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||| |||||||||||||    
T  45692906 ctaaatcttattcatcaaacgtgtcaacgaaat 45692874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 189
Target Start/End: Original strand, 50187498 - 50187574
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||| |||||||||  | ||||||||||  ||||||||||||| ||||||||  || |||||| ||||||| |||||    
T  50187498 aaaaaaggcaaattttacggtacacccaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaat 50187574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 53936794 - 53936762
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||| ||||||||||||||||||||||||    
T  53936794 ctaaatctgattcatcaaaagtgtcaacgaaat 53936762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 16989 - 16916
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  16989 ggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgag 16916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 55855 - 55928
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  55855 ggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgag 55928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 8549961 - 8549888
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  8549961 ggcaaattctatggtacacccaatatatttgagtgtatcggtacactcactctttaaattaatggttaaatgag 8549888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 33574577 - 33574504
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  33574577 ggcaaattctatggtacacccactatatttgagtgtatcggcacactcactctttaaattcatagttaaatgag 33574504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 1244813 - 1244888
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  1244813 taggcaaattctatggtacatccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 1244888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 3141447 - 3141376
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| |||||||||| | |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  3141447 aggcaaattctatggtacacctactatatttgagtgtaccggtacactcactctttaaattcatagttaaat 3141376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 110 - 192
Target Start/End: Original strand, 9686767 - 9686849
Alignment:
Q  110 tataaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||||||| ||||||||| || |||||||||||||||| |||||||||||||||||||| |  ||||||||||    
T  9686767 tataaaaaaggcaaattctatggtacactcaatatatttgagtgtatcagtacactcactctttaaattaacggttaaatgag 9686849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 9661752 - 9661825
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||| || |||||||||| |||||||||||||    
T  9661752 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacccattctttaaattaatagttaaatgag 9661825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 4509430 - 4509500
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||| |||||||||| | |||||||||||||| |||||||| ||||||||||||| ||||||||||    
T  4509430 ggcaaattctatggtacacctaatatatttgagtgtaccggtacacccactctttaaattaatagttaaat 4509500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 23416494 - 23416567
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| | |||||||||| ||||||||| |||| ||||||||    
T  23416494 ggcaaattctatggtacacccactatatttgagtgtaccagtacactcacactttaaattcatagctaaatgag 23416567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 4576386 - 4576458
Alignment:
Q  120 gcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| |||||||| ||| ||||||||| |||| ||||||||| |||||||||||| || ||||||||||    
T  4576386 gcaaattctatggtacagccaatatatttgaatgtaccggtacacttactctttaaattaatggttaaatgag 4576458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 243294 - 243220
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||  |||||||| ||| |||||||||||| | |||||||| || |||||||||| |||||||||||||    
T  243294 aggcaaattatatggtacatccaatatatttgagtgcaccggtacacacattctttaaattaatagttaaatgag 243220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 22755241 - 22755314
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| ||| |||||||| |||||||||||||| ||||||||||  |||||||||| |||  ||||||||    
T  22755241 ggcaaattctatgatacacccaatatatttgagtgtaccggtacactccttctttaaattaataactaaatgag 22755314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 13719112 - 13719184
Alignment:
Q  120 gcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| | ||||||||||  ||||||||||||| |||||||||   || |||||||||||||||||||||    
T  13719112 gcaaattctacggtacacccaacatatttgagtgtaccggtacactagatccttaaatttatagttaaatgag 13719184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 14778919 - 14778985
Alignment:
Q  129 atggtacacccattatat---ttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||| |||||   ||||||||| |||||||||||||||||||||| || ||||||||||    
T  14778919 atggtacacccaatatatatattgagtgtaccggtacactcactctttaaattaatggttaaatgag 14778985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 142 - 192
Target Start/End: Complemental strand, 8310250 - 8310200
Alignment:
Q  142 tatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||||||| || |||||||| |||||||||| |||||||||||||    
T  8310250 tatatttgagtgtaccgatacactcattctttaaattaatagttaaatgag 8310200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 243170 - 243138
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  243170 ctaaatcttattcatcaaaagtgtcaacgaaat 243138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 2564847 - 2564879
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  2564847 ctaaatcttattcatcaaaagtgtcaacgaaat 2564879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 3141324 - 3141292
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  3141324 ctaaatcttattcatcaaaagtgtcaacgaaat 3141292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 22755364 - 22755396
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  22755364 ctaaatcttattcatcaaaagtgtcaacgaaat 22755396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 121 - 192
Target Start/End: Original strand, 2258905 - 2258975
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| ||||||||||||  | |||||||||||| |||||||| | || ||||||| |||||||||||||    
T  2258905 caaattctatggtacacccaaca-atttgagtgtattggtacactaaatccttaaattaatagttaaatgag 2258975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 6016213 - 6016166
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||||| |||||||||||| || |||||| |||||||||||||    
T  6016213 taggcaaattctatggtacacccaataaatttgaatgtatcggtacac 6016166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 1096220 - 1096293
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| ||| |||||||||||| ||| ||| | ||||| |||||||| | |||||||||| |||||||||||||    
T  1096220 aggcaagttctatggtacacccaatattttt-attgtattggtacactaaatctttaaattaatagttaaatgag 1096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 33573999 - 33574068
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||  |||||||| |||| |||||||||| || ||||||||  |||||||||||| ||||||||||    
T  33573999 ggcaaattatatggtacatccat-atatttgagtataccggtacacctactctttaaattaatagttaaat 33574068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 6093660 - 6093733
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| | | ||||||||  ||||||||||||||||||||||  ||  ||||| ||||||| ||||||||    
T  6093660 ggcaaattctacgatacacccaacatatttgagtgtatcggtacacaaaccttttaattttataggtaaatgag 6093733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 191
Target Start/End: Complemental strand, 29024016 - 29023943
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    |||||||||| | ||||||||||  ||||||||||||| ||||||||  ||  ||||| ||||||| |||||||    
T  29024016 aggcaaattctacggtacacccaacatatttgagtgtaccggtacaccaaccttttaattttataggtaaatga 29023943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 31644808 - 31644735
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| || |||||| ||  ||||||||||||| ||||||||  || |||||| ||||||| ||||||||    
T  31644808 ggcaaattctatcgtacactcaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgag 31644735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 529080 - 529048
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||| |||||||||||    
T  529080 ctaaatcttattcatcaaaagcgtcaacgaaat 529048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 1244941 - 1244973
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||| |||||||||||||    
T  1244941 ctaaatcttattcatcaaacgtgtcaacgaaat 1244973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 4576508 - 4576540
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  4576508 ctaaatcttattcatcaaaagtgttaacgaaat 4576540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 164
Target Start/End: Complemental strand, 4979497 - 4979449
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    |||| ||||||| | ||||||||||  ||||||||||||||||||||||    
T  4979497 atagacaaattctacggtacacccaacatatttgagtgtatcggtacac 4979449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 8549838 - 8549806
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  8549838 ctaaatcttattcatcaaaagtgttaacgaaat 8549806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 9661877 - 9661909
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||| ||||||||||||||||||||||||    
T  9661877 ctaaatctgattcatcaaaagtgtcaacgaaat 9661909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 9686899 - 9686931
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  9686899 ctaaatcttattcatcaaaagtgttaacgaaat 9686931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 23416619 - 23416651
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||| ||||||||||    
T  23416619 ctaaatcttattcatcaaaagtatcaacgaaat 23416651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 6e-22; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 9589113 - 9589186
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||  |||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  9589113 ggcaaattttatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 9589186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 121 - 192
Target Start/End: Complemental strand, 7673704 - 7673633
Alignment:
Q  121 caaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| |||||||||||| | |||||||||||| |||||||||||||||||||||| |||||||||||||    
T  7673704 caaattctatggtacacccactgtatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 7673633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 113 - 192
Target Start/End: Original strand, 30980874 - 30980953
Alignment:
Q  113 aaaataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||| ||||||| |||||||||||| ||||||| ||||||| |||||| |||||||||||||| |||||||||||||    
T  30980874 aaaatagacaaattctatggtacacccaatatattttagtgtattggtacattcactctttaaattaatagttaaatgag 30980953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 40947171 - 40947100
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||||| ||||| |||||| |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  40947171 aggcaaattctatggtgcacccaatatatttgagtgtaccggtacactcactctttaaattaatagttaaat 40947100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 4740227 - 4740297
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||  |||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||    
T  4740227 ggcaaattttatggtacacccactatatttgagtgtaccggtacactcactctttaaattcatagttaaat 4740297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 122 - 192
Target Start/End: Complemental strand, 18999123 - 18999053
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||| ||| |||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  18999123 aaattctatggtacatccactatatttgagtgtaccggtacactcactctttaaattcatagttaaatgag 18999053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 118 - 192
Target Start/End: Complemental strand, 21404606 - 21404532
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||||| |||||||||||| |||||||||||||| || |||||||||| |||||||| |||||||||||||    
T  21404606 aggcaaattctatggtacacccactatatttgagtgtaccgatacactcactatttaaattcatagttaaatgag 21404532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 39620191 - 39620261
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||  |||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  39620191 ggcaaattttatggtacacccaatatatttgagtgtatcggtacacccactctttaaattaatagttaaat 39620261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 1580648 - 1580575
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| ||||||||| |||||||||||| | |||||||||||    
T  1580648 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacttactctttaaattaacagttaaatgag 1580575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 4049367 - 4049294
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| |||||||||||||| || ||||||||||||||||||| |||||||||||||    
T  4049367 ggcaaattctatggtacatccactatatttgagtgtaccgttacactcactctttaaattcatagttaaatgag 4049294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 45157530 - 45157603
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||||||| |||||||||||||| |||||||| ||||||||||||| || ||||||||||    
T  45157530 ggcaaattctatggtacacccaatatatttgagtgtaccggtacacccactctttaaattaatggttaaatgag 45157603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 118 - 185
Target Start/End: Original strand, 14839805 - 14839872
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagtt 185  Q
    |||||||||| |||||||||||| | |||||||||||| | |||||||||||||||||||||||||||    
T  14839805 aggcaaattctatggtacacccactgtatttgagtgtaccagtacactcactctttaaatttatagtt 14839872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 17451691 - 17451618
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| ||||||||||   ||||||||||||||  ||||||||||||||||||||| |||||||||||||    
T  17451691 ggcaaattctatggtacacctgctatatttgagtgtactggtacactcactctttaaattcatagttaaatgag 17451618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 40495465 - 40495538
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| | || ||||||| |||||||||||||| ||||||||| |||||||||||| |||||||||||||    
T  40495465 ggcaaattctacggcacacccactatatttgagtgtaccggtacacttactctttaaattcatagttaaatgag 40495538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 35896821 - 35896749
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||||| ||||||||| || |||||||||||||| |||||||| ||| ||||||||| ||||||||||    
T  35896821 taggcaaattctatggtacactcaatatatttgagtgtaccggtacacccacactttaaattaatagttaaat 35896749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 42849737 - 42849665
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaa 188  Q
    |||||||||||| |||||||| ||| |||||||||||||| || ||||| ||||||||||||| |||||||||    
T  42849737 ataggcaaattctatggtacatccaatatatttgagtgtaccgatacacccactctttaaattaatagttaaa 42849665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 9122553 - 9122490
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||| ||||||||||| |||||| || |||| ||||||||||||||||||||||||||||    
T  9122553 atggtacatccattatatttaagtgtaccgatacattcactctttaaatttatagttaaatgag 9122490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 117 - 192
Target Start/End: Complemental strand, 32602712 - 32602637
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||  | |||||| ||| |||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  32602712 taggcaaattatacggtacatccactatatttgagtgtaccggtacactcactctttaaattcataattaaatgag 32602637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 6945340 - 6945413
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| |||||||| ||| |||||||||||||| |||||||| || | |||||||| |||||||||||||    
T  6945340 ggcaaattctatggtacatccaatatatttgagtgtaccggtacacccattttttaaattaatagttaaatgag 6945413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 34091696 - 34091768
Alignment:
Q  120 gcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||||  ||||||||  || |||||||||||||| || ||||| ||||||||||||| |||||||||||||    
T  34091696 gcaaattatatggtacattcaatatatttgagtgtaccgatacacccactctttaaattaatagttaaatgag 34091768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 4298298 - 4298235
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| || |||||||||||||| |||||||| || |||||||||| ||||||| |||||    
T  4298298 atggtacactcaatatatttgagtgtaccggtacacccattctttaaattaatagttacatgag 4298235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 192
Target Start/End: Original strand, 3260965 - 3261035
Alignment:
Q  122 aaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||||| |||||||| ||| ||||||||||| ||  | |||||||||| |||||||| |||||||||||||    
T  3260965 aaattctatggtacatccaatatatttgagtttactgatacactcactttttaaattaatagttaaatgag 3261035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 4049242 - 4049210
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  4049242 ctaaatcttattcatcaaaagtgtcaacgaaat 4049210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 6945464 - 6945496
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  6945464 ctaaatcttattcatcaaaagtgtcaacgaaat 6945496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 7673580 - 7673548
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  7673580 ctaaatcttattcatcaaaagtgtcaacgaaat 7673548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 9589237 - 9589269
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  9589237 ctaaatcttattcatcaaaagtgtcaacgaaat 9589269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 17451566 - 17451534
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  17451566 ctaaatcttattcatcaaaagtgtcaacgaaat 17451534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 18999002 - 18998970
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  18999002 ctaaatcttattcatcaaaagtgtcaacgaaat 18998970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 27400853 - 27400885
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  27400853 ctaaatcttattcatcaaaagtgtcaacgaaat 27400885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 38064781 - 38064813
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  38064781 ctaaatcttattcatcaaaagtgtcaacgaaat 38064813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 44144368 - 44144336
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||||||||||||    
T  44144368 ctaaatcttattcatcaaaagtgtcaacgaaat 44144336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 272
Target Start/End: Complemental strand, 16637309 - 16637278
Alignment:
Q  241 taaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||||||||    
T  16637309 taaatcttattcatcaaaagtgtcaacgaaat 16637278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 37725549 - 37725596
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||||| |||||||||||| || ||||| ||||||||||||||    
T  37725549 taggcaaattctatggtacacccaataaatttgggtgtatcggtacac 37725596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 164
Target Start/End: Original strand, 40533249 - 40533296
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||||| |||||||||||| || ||||| ||||||||||||||    
T  40533249 taggcaaattctatggtacacccaataaatttgggtgtatcggtacac 40533296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 21425211 - 21425257
Alignment:
Q  118 aggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    |||||||||| |||||||||||| || ||||| ||||||||||||||    
T  21425211 aggcaaattctatggtacacccaataaatttgggtgtatcggtacac 21425257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 490140 - 490095
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||||    
T  490140 ggcaaattctatggtacacccaataaatttgggtgtatcggtacac 490095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 43440380 - 43440331
Alignment:
Q  142 tatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    |||||||||||||| ||||||| ||| | |||||||| ||||||||||||    
T  43440380 tatatttgagtgtaccggtacattcattttttaaattcatagttaaatga 43440331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 4298184 - 4298152
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||| ||||||||||||||    
T  4298184 ctaaatcttattcatcaagagtgtcaacgaaat 4298152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 4740346 - 4740378
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||||||| |||||    
T  4740346 ctaaatcttattcatcaaaagtgtcaatgaaat 4740378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 14839923 - 14839955
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||| ||||||||||||||||||||    
T  14839923 ctaaatcttattaatcaaaagtgtcaacgaaat 14839955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 15383227 - 15383195
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||| ||||||||||    
T  15383227 ctaaatcttattcatcaaaagtatcaacgaaat 15383195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 115 - 191
Target Start/End: Complemental strand, 15383354 - 15383278
Alignment:
Q  115 aataggcaaattccatggtacac--ccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatga 191  Q
    |||||| |||||| |||||||||  ||| |||||||||||  | ||||||||  |||||||||||| ||||||||||||    
T  15383354 aataggtaaattctatggtacacacccaatatatttgagt--accggtacacctactctttaaattaatagttaaatga 15383278  T

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Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 21404482 - 21404450
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||| |||||||||||||    
T  21404482 ctaaatcttattcatcaaatgtgtcaacgaaat 21404450  T

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Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 32401487 - 32401427
Alignment:
Q  129 atggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    |||||||| ||| |||||||||||||||| |||||  || |||||||||| ||| ||||||    
T  32401487 atggtacatccaatatatttgagtgtatcagtacatccattctttaaattaataattaaat 32401427  T

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Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Complemental strand, 32602588 - 32602556
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||| ||||||||||||||||||||||||||    
T  32602588 ctaaattttattcatcaaaagtgtcaacgaaat 32602556  T

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Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 38064655 - 38064731
Alignment:
Q  116 ataggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    |||| ||||||| |||||||| ||| ||||||||||||||   |||||| |||||||| |||  || ||||||||||    
T  38064655 atagacaaattctatggtacatccaatatatttgagtgtacttgtacacccactctttgaatgaatggttaaatgag 38064731  T

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Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 40495590 - 40495622
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    ||||||||||||||||||||||| |||||||||    
T  40495590 ctaaatcttattcatcaaaagtgccaacgaaat 40495622  T

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Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 272
Target Start/End: Original strand, 45157653 - 45157685
Alignment:
Q  240 ctaaatcttattcatcaaaagtgtcaacgaaat 272  Q
    |||||||||||||||||||||||| ||||||||    
T  45157653 ctaaatcttattcatcaaaagtgttaacgaaat 45157685  T

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Target: scaffold0432 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 189
Target Start/End: Complemental strand, 3436 - 3366
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaat 189  Q
    ||||||||| |||||||||||| |||||||||||||| | ||||||  |||||||||||| ||||||||||    
T  3436 ggcaaattctatggtacacccaatatatttgagtgtaccagtacacctactctttaaattaatagttaaat 3366  T

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Target: scaffold0775 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0775
Description:

Target: scaffold0775; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 245 - 172
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||| ||||||||||||  ||||||||||||| ||||||||  || |||||| ||||||| ||||||||    
T  245 ggcaaattctatggtacacccaacatatttgagtgtaccggtacaccaaccctttaattttataggtaaatgag 172  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 117 - 192
Target Start/End: Original strand, 45759 - 45834
Alignment:
Q  117 taggcaaattccatggtacacccattatatttgagtgtatcggtacactcactctttaaatttatagttaaatgag 192  Q
    ||||||||||| |||||||| |||  |||||||||||||||| ||||   | |||||||||| |||||||| ||||    
T  45759 taggcaaattctatggtacatccaaaatatttgagtgtatcgatacatcaaatctttaaattaatagttaagtgag 45834  T

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Target: scaffold0239 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 15380 - 15425
Alignment:
Q  119 ggcaaattccatggtacacccattatatttgagtgtatcggtacac 164  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||||    
T  15380 ggcaaattctatggtacacccaataaatttgggtgtatcggtacac 15425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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