View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0854_low_29 (Length: 331)

Name: NF0854_low_29
Description: NF0854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0854_low_29
NF0854_low_29
[»] chr8 (9 HSPs)
chr8 (44-93)||(17934291-17934340)
chr8 (44-93)||(5967371-5967420)
chr8 (44-93)||(32821642-32821691)
chr8 (220-256)||(21382432-21382468)
chr8 (220-256)||(22560992-22561028)
chr8 (226-256)||(27537177-27537207)
chr8 (44-93)||(21511651-21511700)
chr8 (227-256)||(33632141-33632170)
chr8 (48-93)||(41636445-41636490)
[»] scaffold0024 (1 HSPs)
scaffold0024 (44-93)||(42225-42274)
[»] chr3 (30 HSPs)
chr3 (44-93)||(12113349-12113398)
chr3 (220-256)||(15556783-15556819)
chr3 (220-256)||(18934060-18934096)
chr3 (47-93)||(46552792-46552838)
chr3 (223-256)||(15564634-15564667)
chr3 (220-256)||(4769354-4769390)
chr3 (220-256)||(7600693-7600729)
chr3 (220-256)||(10246459-10246495)
chr3 (220-256)||(10602313-10602349)
chr3 (220-256)||(10608625-10608661)
chr3 (220-256)||(11939947-11939983)
chr3 (220-256)||(14815328-14815364)
chr3 (220-256)||(15853916-15853952)
chr3 (220-256)||(16378120-16378156)
chr3 (220-256)||(17078024-17078060)
chr3 (220-256)||(17696814-17696850)
chr3 (220-256)||(18214691-18214727)
chr3 (227-256)||(8991122-8991151)
chr3 (227-256)||(14953029-14953058)
chr3 (220-256)||(6815206-6815242)
chr3 (220-256)||(12246515-12246551)
chr3 (224-256)||(13047232-13047264)
chr3 (220-256)||(13136051-13136087)
chr3 (220-256)||(13142659-13142695)
chr3 (220-256)||(13504722-13504758)
chr3 (220-256)||(17733598-17733634)
chr3 (220-256)||(18884326-18884362)
chr3 (220-256)||(19034867-19034903)
chr3 (220-256)||(30027193-30027229)
chr3 (220-256)||(41472634-41472670)
[»] chr2 (22 HSPs)
chr2 (44-93)||(32493568-32493617)
chr2 (220-256)||(24795126-24795162)
chr2 (220-256)||(28307541-28307577)
chr2 (44-93)||(3436431-3436480)
chr2 (44-93)||(14660678-14660727)
chr2 (44-93)||(41399163-41399212)
chr2 (220-256)||(111188-111224)
chr2 (220-256)||(117881-117917)
chr2 (220-256)||(22044501-22044537)
chr2 (220-256)||(22287896-22287932)
chr2 (220-256)||(24877205-24877241)
chr2 (220-256)||(25357849-25357885)
chr2 (220-256)||(41368826-41368862)
chr2 (44-93)||(39952156-39952205)
chr2 (220-256)||(17582918-17582954)
chr2 (220-256)||(17590745-17590781)
chr2 (220-256)||(20173095-20173131)
chr2 (220-256)||(22032546-22032582)
chr2 (220-256)||(22665400-22665436)
chr2 (220-256)||(27615138-27615174)
chr2 (220-256)||(27621264-27621300)
chr2 (220-256)||(35075938-35075974)
[»] chr1 (14 HSPs)
chr1 (44-93)||(36700091-36700140)
chr1 (44-93)||(36716195-36716244)
chr1 (220-256)||(17094442-17094478)
chr1 (220-256)||(17102278-17102314)
chr1 (44-90)||(10891473-10891519)
chr1 (220-256)||(2395644-2395680)
chr1 (220-256)||(19209664-19209700)
chr1 (220-256)||(20085701-20085737)
chr1 (220-256)||(22824383-22824419)
chr1 (44-93)||(15802064-15802113)
chr1 (220-253)||(23291357-23291390)
chr1 (44-93)||(51161831-51161880)
chr1 (220-256)||(27041458-27041494)
chr1 (220-256)||(27047212-27047248)
[»] chr5 (29 HSPs)
chr5 (220-256)||(21729577-21729613)
chr5 (44-93)||(12220236-12220285)
chr5 (220-256)||(15731653-15731689)
chr5 (220-256)||(15735872-15735908)
chr5 (220-256)||(20616027-20616063)
chr5 (220-256)||(22317354-22317390)
chr5 (220-256)||(22323961-22323997)
chr5 (220-256)||(23598527-23598563)
chr5 (220-256)||(23684563-23684599)
chr5 (220-256)||(23748389-23748425)
chr5 (220-256)||(23850212-23850248)
chr5 (220-256)||(24935180-24935216)
chr5 (220-256)||(24940872-24940908)
chr5 (220-256)||(26842532-26842568)
chr5 (220-256)||(28622323-28622359)
chr5 (220-256)||(34780022-34780058)
chr5 (44-93)||(394372-394421)
chr5 (44-93)||(865633-865682)
chr5 (44-93)||(5841348-5841397)
chr5 (44-93)||(7861391-7861440)
chr5 (44-93)||(10378819-10378868)
chr5 (44-93)||(13146185-13146234)
chr5 (44-93)||(15834866-15834915)
chr5 (227-256)||(22142716-22142745)
chr5 (220-256)||(16104596-16104632)
chr5 (220-256)||(23618816-23618852)
chr5 (220-256)||(25006649-25006685)
chr5 (220-256)||(25577934-25577970)
chr5 (220-256)||(30729575-30729611)
[»] chr7 (35 HSPs)
chr7 (49-95)||(45234596-45234642)
chr7 (44-93)||(12392155-12392204)
chr7 (44-93)||(12408020-12408069)
chr7 (44-93)||(28606151-28606200)
chr7 (220-256)||(4159022-4159058)
chr7 (220-256)||(8712699-8712735)
chr7 (220-256)||(8718203-8718239)
chr7 (220-256)||(9577563-9577599)
chr7 (220-256)||(9584989-9585025)
chr7 (220-256)||(13667516-13667552)
chr7 (220-256)||(13674194-13674230)
chr7 (220-256)||(15297994-15298030)
chr7 (220-256)||(18389374-18389410)
chr7 (220-256)||(18589599-18589635)
chr7 (220-256)||(18593193-18593229)
chr7 (220-256)||(18599824-18599860)
chr7 (220-256)||(18618455-18618491)
chr7 (220-256)||(18915873-18915909)
chr7 (220-256)||(38295731-38295767)
chr7 (44-95)||(28606739-28606790)
chr7 (223-256)||(9583233-9583266)
chr7 (44-93)||(13954346-13954395)
chr7 (227-256)||(15206425-15206454)
chr7 (44-81)||(37597322-37597359)
chr7 (44-93)||(43094704-43094753)
chr7 (220-256)||(15019-15055)
chr7 (220-256)||(14545197-14545233)
chr7 (220-256)||(14551437-14551473)
chr7 (220-256)||(15175973-15176009)
chr7 (220-256)||(16119690-16119726)
chr7 (220-256)||(16155299-16155335)
chr7 (220-256)||(18287940-18287976)
chr7 (220-256)||(19014988-19015024)
chr7 (220-256)||(23077599-23077635)
chr7 (220-256)||(39387510-39387546)
[»] chr6 (15 HSPs)
chr6 (44-93)||(21381483-21381532)
chr6 (44-93)||(21955628-21955677)
chr6 (220-256)||(18461002-18461038)
chr6 (220-256)||(19075685-19075721)
chr6 (220-256)||(20022636-20022672)
chr6 (220-256)||(20102209-20102245)
chr6 (220-256)||(22165390-22165426)
chr6 (220-256)||(23027742-23027778)
chr6 (44-93)||(12650115-12650164)
chr6 (220-256)||(15693225-15693261)
chr6 (220-256)||(15699893-15699929)
chr6 (220-256)||(16738454-16738490)
chr6 (220-256)||(22244150-22244186)
chr6 (220-256)||(23352430-23352466)
chr6 (220-256)||(31549243-31549279)
[»] chr4 (14 HSPs)
chr4 (44-93)||(50679853-50679902)
chr4 (220-256)||(3691-3727)
chr4 (220-256)||(10684342-10684378)
chr4 (220-256)||(10897982-10898018)
chr4 (220-256)||(11496455-11496491)
chr4 (220-256)||(26292932-26292968)
chr4 (220-256)||(40845454-40845490)
chr4 (220-256)||(42709572-42709608)
chr4 (227-256)||(8036-8065)
chr4 (44-81)||(24970044-24970081)
chr4 (44-93)||(35321555-35321604)
chr4 (227-256)||(40567494-40567523)
chr4 (220-256)||(13823251-13823287)
chr4 (220-256)||(21420297-21420333)
[»] scaffold0414 (1 HSPs)
scaffold0414 (220-256)||(49-85)
[»] scaffold0409 (2 HSPs)
scaffold0409 (220-256)||(3653-3689)
scaffold0409 (220-256)||(11908-11944)
[»] scaffold0404 (2 HSPs)
scaffold0404 (220-256)||(1376-1412)
scaffold0404 (220-256)||(3647-3683)
[»] scaffold0213 (1 HSPs)
scaffold0213 (220-256)||(8767-8803)
[»] scaffold0134 (1 HSPs)
scaffold0134 (220-256)||(42796-42832)
[»] scaffold0112 (1 HSPs)
scaffold0112 (220-256)||(4977-5013)
[»] scaffold0104 (1 HSPs)
scaffold0104 (220-256)||(45136-45172)
[»] scaffold0084 (1 HSPs)
scaffold0084 (220-256)||(43616-43652)
[»] scaffold0075 (1 HSPs)
scaffold0075 (220-256)||(36542-36578)
[»] scaffold0074 (1 HSPs)
scaffold0074 (220-256)||(34092-34128)
[»] scaffold0029 (2 HSPs)
scaffold0029 (220-256)||(117463-117499)
scaffold0029 (225-256)||(123712-123743)
[»] scaffold0007 (1 HSPs)
scaffold0007 (220-256)||(168345-168381)
[»] scaffold0004 (1 HSPs)
scaffold0004 (220-256)||(253713-253749)
[»] scaffold0802 (1 HSPs)
scaffold0802 (227-256)||(4157-4186)
[»] scaffold0401 (1 HSPs)
scaffold0401 (223-256)||(2-35)
[»] scaffold0441 (1 HSPs)
scaffold0441 (220-256)||(14548-14584)
[»] scaffold0142 (3 HSPs)
scaffold0142 (220-256)||(9-45)
scaffold0142 (220-256)||(3543-3579)
scaffold0142 (220-256)||(12262-12298)
[»] scaffold0069 (1 HSPs)
scaffold0069 (220-256)||(38595-38631)
[»] scaffold0059 (1 HSPs)
scaffold0059 (220-256)||(56081-56117)
[»] scaffold0023 (1 HSPs)
scaffold0023 (228-256)||(117165-117193)
[»] scaffold0001 (1 HSPs)
scaffold0001 (220-256)||(522300-522336)


Alignment Details
Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 17934340 - 17934291
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17934340 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 17934291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 5967420 - 5967371
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||  ||||||||||||||| |||||||||||    
T  5967420 ttataaccaaatgatgaaatatttagaatgacattttaagataaactatt 5967371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 32821691 - 32821642
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| |||||||||||||||  ||||||||||    
T  32821691 ttataaccaaatgatgaaatacttagaatgacattttaaaataaactatt 32821642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 21382432 - 21382468
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  21382432 cagggaagaatattggatggattgagtcttggagcaa 21382468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 22561028 - 22560992
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  22561028 cagggaagaatattggatggattgagtcttggagcaa 22560992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 226 - 256
Target Start/End: Original strand, 27537177 - 27537207
Alignment:
Q  226 agaatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||||||||||||    
T  27537177 agaatattggatggattgaatcttggagcaa 27537207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 21511651 - 21511700
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||||| |||| ||||||||||||||| ||||| |||||    
T  21511651 ttataacaaaatgatgaaatacttagaatgacattttaagataatctatt 21511700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 33632141 - 33632170
Alignment:
Q  227 gaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||||||||    
T  33632141 gaatattggatggattgaatcttggagcaa 33632170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 93
Target Start/End: Complemental strand, 41636490 - 41636445
Alignment:
Q  48 aaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||| |||| | ||||||||||||| |||||||||||    
T  41636490 aaccaaatgatgaaatactttgaatgacattttaagataaactatt 41636445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 42225 - 42274
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  42225 ttataaccaaatgatgaaatacttagaatgacattttaagataaactatt 42274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000002; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 12113398 - 12113349
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  12113398 ttataaccaaatgatgaaatacttagaatgacattttaagataaactatt 12113349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 15556819 - 15556783
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||||||||||||||||||    
T  15556819 cagggaagaatattggatggattgaatcttggagcaa 15556783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 18934060 - 18934096
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||||||||||||||||||    
T  18934060 cagggaagaatattggatggattgaatcttggagcaa 18934096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 47 - 93
Target Start/End: Original strand, 46552792 - 46552838
Alignment:
Q  47 taaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||||    
T  46552792 taaccaaatgatgaaatacttagaatgacattttaagataaactatt 46552838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 15564667 - 15564634
Alignment:
Q  223 ggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||||||||||||    
T  15564667 ggaagaatattggatggattgaatcttggagcaa 15564634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 4769390 - 4769354
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4769390 cagggaagaatattggatggattgagtcttggagcaa 4769354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 7600693 - 7600729
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  7600693 cagggaagaatattggatggattgagtcttggagcaa 7600729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 10246459 - 10246495
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  10246459 caggaaagaatattggatggattgaatcttggagcaa 10246495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 10602349 - 10602313
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  10602349 cagggaagaatattggatggattgagtcttggagcaa 10602313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 10608661 - 10608625
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  10608661 cagggaagaatattggatggattgagtcttggagcaa 10608625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 11939947 - 11939983
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  11939947 caggaaagaatattggatggattgaatcttggagcaa 11939983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 14815328 - 14815364
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  14815328 cagggaagaatattggatggattgagtcttggagcaa 14815364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 15853916 - 15853952
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15853916 cagggaagaatattggatggattgagtcttggagcaa 15853952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 16378156 - 16378120
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  16378156 cagggaagaatattggatggattgagtcttggagcaa 16378120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 17078024 - 17078060
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17078024 cagggaagaatattggatggattgagtcttggagcaa 17078060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 17696850 - 17696814
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  17696850 cagggaagaatattggatggattgagtcttggagcaa 17696814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 18214727 - 18214691
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18214727 cagggaagaatattggatggattgagtcttggagcaa 18214691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 8991122 - 8991151
Alignment:
Q  227 gaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||||||||    
T  8991122 gaatattggatggattgaatcttggagcaa 8991151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 14953029 - 14953058
Alignment:
Q  227 gaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||||||||    
T  14953029 gaatattggatggattgaatcttggagcaa 14953058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 6815206 - 6815242
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  6815206 cagggaagaatattggatggagtgagtcttggagcaa 6815242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 12246515 - 12246551
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  12246515 cagggaagaatattggatggagtgagtcttggagcaa 12246551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 224 - 256
Target Start/End: Complemental strand, 13047264 - 13047232
Alignment:
Q  224 gaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||| |||||||||||    
T  13047264 gaagaatattggatggattgagtcttggagcaa 13047232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 13136087 - 13136051
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  13136087 caggaaagaatattggatggattgagtcttggagcaa 13136051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 13142695 - 13142659
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  13142695 caggaaagaatattggatggattgagtcttggagcaa 13142659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 13504758 - 13504722
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  13504758 caggaaagaatattggatggattgagtcttggagcaa 13504722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 17733634 - 17733598
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  17733634 caggaaagaatattggatggattgagtcttggagcaa 17733598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 18884362 - 18884326
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  18884362 caggaaagaatattggatggattgagtcttggagcaa 18884326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 19034903 - 19034867
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  19034903 caggaaagaatattggatggattgagtcttggagcaa 19034867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 30027229 - 30027193
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  30027229 caggaaagaatattggatggattgagtcttggagcaa 30027193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 41472634 - 41472670
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  41472634 caggaaagaatattggatggattgagtcttggagcaa 41472670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 32493617 - 32493568
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  32493617 ttataaccaaatgatgaaatacttagaatgacattttaagataaactatt 32493568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 24795162 - 24795126
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||||||||||||||||||    
T  24795162 cagggaagaatattggatggattgaatcttggagcaa 24795126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 28307541 - 28307577
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||||||||||||||||||    
T  28307541 cagggaagaatattggatggattgaatcttggagcaa 28307577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 3436480 - 3436431
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||||| |||| ||||||||||||||| |||||||||||    
T  3436480 ttataacaaaatgatgaaatacttagaatgacattttaagataaactatt 3436431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 14660678 - 14660727
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||| | |||| ||||||||||||||| |||||||||||    
T  14660678 ttataaccaaatgataaaatacttagaatgacattttaagataaactatt 14660727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 41399163 - 41399212
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||| ||| ||||||||||||| |||||| |||||||||||    
T  41399163 ttataaccaaatggtgaaatacctagaatgatattttaagataaactatt 41399212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 111188 - 111224
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  111188 caggaaagaatattggatggattgaatcttggagcaa 111224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 117881 - 117917
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  117881 caggaaagaatattggatggattgaatcttggagcaa 117917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 22044537 - 22044501
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  22044537 cagggaagaatattggatggattgagtcttggagcaa 22044501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 22287896 - 22287932
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  22287896 cagggaagaatattggatggattgagtcttggagcaa 22287932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 24877205 - 24877241
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24877205 cagggaagaatattggatggattgagtcttggagcaa 24877241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 25357849 - 25357885
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  25357849 cagggaagaatattggatggattgagtcttggagcaa 25357885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 41368826 - 41368862
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  41368826 caggaaagaatattggatggattgaatcttggagcaa 41368862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 39952205 - 39952156
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||||| |||| ||||||||||||||| |||||| ||||    
T  39952205 ttataacaaaatgatgaaatacttagaatgacattttaagataaattatt 39952156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 17582918 - 17582954
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  17582918 cagggaagaatattggatggagtgagtcttggagcaa 17582954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 17590745 - 17590781
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  17590745 cagggaagaatattggatggagtgagtcttggagcaa 17590781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 20173131 - 20173095
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  20173131 caggaaagaatattggatggattgagtcttggagcaa 20173095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 22032546 - 22032582
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||| | |||||||||||    
T  22032546 cagggaagaatattggatggattaagtcttggagcaa 22032582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 22665400 - 22665436
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  22665400 caggaaagaatattggatggattgagtcttggagcaa 22665436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 27615138 - 27615174
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  27615138 caggaaagaatattcgatggattgaatcttggagcaa 27615174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 27621264 - 27621300
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  27621264 cagggaagaatattggatggagtgagtcttggagcaa 27621300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 35075938 - 35075974
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  35075938 caggaaagaatattggatggattgagtcttggagcaa 35075974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 36700091 - 36700140
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  36700091 ttataaccaaatgatgaaatacttagaatgacattttaagataaactatt 36700140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 36716195 - 36716244
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  36716195 ttataaccaaatgatgaaatacttagaatgacattttaagataaactatt 36716244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 17094478 - 17094442
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||||||||||||||||||    
T  17094478 cagggaagaatattggatggattgaatcttggagcaa 17094442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 17102314 - 17102278
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||||||||||||||||||    
T  17102314 cagggaagaatattggatggattgaatcttggagcaa 17102278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 90
Target Start/End: Original strand, 10891473 - 10891519
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaact 90  Q
    ||||||||||||||||| |||| ||||||||||||||| ||||||||    
T  10891473 ttataaccaaatgatgaaatacttagaatgacattttaagataaact 10891519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 2395680 - 2395644
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  2395680 caggaaagaatattggatggattgaatcttggagcaa 2395644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 19209664 - 19209700
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  19209664 cagggaagaatattggatggattgagtcttggagcaa 19209700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 20085737 - 20085701
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  20085737 caggaaagaatattggatggattgaatcttggagcaa 20085701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 22824383 - 22824419
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  22824383 caggaaagaatattggatggattgaatcttggagcaa 22824419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 15802064 - 15802113
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||||| |||| ||||||||||||||| ||||| |||||    
T  15802064 ttataacaaaatgatgaaatacttagaatgacattttaagataagctatt 15802113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 253
Target Start/End: Complemental strand, 23291390 - 23291357
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggag 253  Q
    |||| |||||||||||||||||||||||||||||    
T  23291390 caggaaagaatattggatggattgaatcttggag 23291357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 51161880 - 51161831
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    |||||| |||||||||| |||| ||||||||||||||| ||| |||||||    
T  51161880 ttataatcaaatgatgaaatacttagaatgacattttaagatcaactatt 51161831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 27041458 - 27041494
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  27041458 caggaaagaatattggatggattgagtcttggagcaa 27041494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 27047212 - 27047248
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  27047212 caggaaagaatattggatggattgagtcttggagcaa 27047248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000008; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 21729577 - 21729613
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||||||||||||||||||    
T  21729577 cagggaagaatattggatggattgaatcttggagcaa 21729613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 12220285 - 12220236
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| |||||||| |||||| |||||||||||    
T  12220285 ttataaccaaatgatgaaatacttagaatgatattttaagataaactatt 12220236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 15731653 - 15731689
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15731653 cagggaagaatattggatggattgagtcttggagcaa 15731689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 15735872 - 15735908
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  15735872 cagggaagaatattggatggattgagtcttggagcaa 15735908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 20616027 - 20616063
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  20616027 cagggaagaatattggatggattgagtcttggagcaa 20616063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 22317390 - 22317354
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  22317390 caggaaagaatattggatggattgaatcttggagcaa 22317354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 22323997 - 22323961
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  22323997 caggaaagaatattggatggattgaatcttggagcaa 22323961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 23598527 - 23598563
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  23598527 cagggaagaatattggatggattgagtcttggagcaa 23598563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 23684563 - 23684599
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  23684563 cagggaagaatattggatggattgagtcttggagcaa 23684599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 23748389 - 23748425
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  23748389 cagggaagaatattggatggattgagtcttggagcaa 23748425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 23850248 - 23850212
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  23850248 cagggaagaatattggatggattgagtcttggagcaa 23850212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 24935180 - 24935216
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24935180 cagggaagaatattggatggattgagtcttggagcaa 24935216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 24940872 - 24940908
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24940872 cagggaagaatattggatggattgagtcttggagcaa 24940908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 26842532 - 26842568
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  26842532 caggaaagaatattggatggattgaatcttggagcaa 26842568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 28622359 - 28622323
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  28622359 cagggaagaatattggatggattgagtcttggagcaa 28622323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 34780022 - 34780058
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  34780022 cagggaagaatattggatggattgagtcttggagcaa 34780058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 394372 - 394421
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||||| |||| ||||||||||||||| ||||| |||||    
T  394372 ttataacaaaatgatgaaatacttagaatgacattttaagataagctatt 394421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 865682 - 865633
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||| | |||| ||||||||||||||| |||||| ||||    
T  865682 ttataaccaaatgataaaatacttagaatgacattttaagataaattatt 865633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 5841397 - 5841348
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| |||||||| ||| || |||||||||||    
T  5841397 ttataaccaaatgatgaaatacttagaatgatattctaagataaactatt 5841348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 7861391 - 7861440
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| || |||||| |||| ||||||||||||||| |||||||||||    
T  7861391 ttataacaaactgatgaaatacttagaatgacattttaagataaactatt 7861440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 10378819 - 10378868
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||| ||||| |||| ||||||||||||||| |||||||||||    
T  10378819 ttataacaaaacgatgaaatacttagaatgacattttaagataaactatt 10378868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 13146234 - 13146185
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    |||||| |||||||||| |||  ||||||||||||||| |||||||||||    
T  13146234 ttataagcaaatgatgaaatatttagaatgacattttaagataaactatt 13146185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 15834866 - 15834915
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||| | ||| |||||||||||||||| |||||||||||    
T  15834866 ttataacaaaatgataaaatatctagaatgacattttaagataaactatt 15834915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Original strand, 22142716 - 22142745
Alignment:
Q  227 gaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||||||||    
T  22142716 gaatattggatggattgaatcttggagcaa 22142745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 16104632 - 16104596
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||| | |||||||||||    
T  16104632 cagggaagaatattggatggattaagtcttggagcaa 16104596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 23618852 - 23618816
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| ||||| |||||    
T  23618852 cagggaagaatattggatggattgagtcttgaagcaa 23618816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 25006685 - 25006649
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  25006685 caggaaagaatattcgatggattgaatcttggagcaa 25006649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 25577970 - 25577934
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  25577970 caggaaagaatattggatggattgagtcttggagcaa 25577934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 30729575 - 30729611
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  30729575 caggaaagaatattggatggattgagtcttggagcaa 30729611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 35; Significance: 0.0000000001; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 45234596 - 45234642
Alignment:
Q  49 accaaatgatgacatacctagaatgacattttaggataaactattga 95  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||||    
T  45234596 accaaatgatgaaatacttagaatgacattttaagataaactattga 45234642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 12392204 - 12392155
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||||| |||| ||||||||||||||| |||||||||||    
T  12392204 ttataacgaaatgatgaaatacttagaatgacattttaagataaactatt 12392155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 12408069 - 12408020
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||||| |||| ||||||||||||||| |||||||||||    
T  12408069 ttataacgaaatgatgaaatacttagaatgacattttaagataaactatt 12408020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 28606200 - 28606151
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| |||||| |||||||| |||||||||||    
T  28606200 ttataaccaaatgatgaaatacttagaatcacattttaagataaactatt 28606151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 4159058 - 4159022
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4159058 cagggaagaatattggatggattgagtcttggagcaa 4159022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 8712699 - 8712735
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8712699 cagggaagaatattggatggattgagtcttggagcaa 8712735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 8718203 - 8718239
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8718203 cagggaagaatattggatggattgagtcttggagcaa 8718239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 9577563 - 9577599
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  9577563 cagggaagaatattggatggattgagtcttggagcaa 9577599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 9584989 - 9585025
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  9584989 cagggaagaatattggatggattgagtcttggagcaa 9585025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 13667516 - 13667552
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  13667516 cagggaagaatattggatggattgagtcttggagcaa 13667552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 13674194 - 13674230
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  13674194 cagggaagaatattggatggattgagtcttggagcaa 13674230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 15298030 - 15297994
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  15298030 caggaaagaatattggatggattgaatcttggagcaa 15297994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 18389374 - 18389410
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18389374 cagggaagaatattggatggattgagtcttggagcaa 18389410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 18589635 - 18589599
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18589635 cagggaagaatattggatggattgagtcttggagcaa 18589599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 18593229 - 18593193
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18593229 cagggaagaatattggatggattgagtcttggagcaa 18593193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 18599860 - 18599824
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18599860 cagggaagaatattggatggattgagtcttggagcaa 18599824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 18618455 - 18618491
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18618455 cagggaagaatattggatggattgagtcttggagcaa 18618491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 18915909 - 18915873
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  18915909 caggaaagaatattggatggattgaatcttggagcaa 18915873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 38295731 - 38295767
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  38295731 cagggaagaatattggatggattgagtcttggagcaa 38295767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 44 - 95
Target Start/End: Original strand, 28606739 - 28606790
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactattga 95  Q
    ||||||| ||||||| | |||| ||||||||||||||| |||||||||||||    
T  28606739 ttataacaaaatgataaaatacttagaatgacattttaagataaactattga 28606790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Original strand, 9583233 - 9583266
Alignment:
Q  223 ggaagaatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||| |||||||||||    
T  9583233 ggaagaatattggatggattgagtcttggagcaa 9583266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 13954395 - 13954346
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||||| |||| |||||| |||||||| |||||||||||    
T  13954395 ttataacaaaatgatgaaatacttagaattacattttaagataaactatt 13954346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Complemental strand, 15206454 - 15206425
Alignment:
Q  227 gaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||||||||    
T  15206454 gaatattggatggattgaatcttggagcaa 15206425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 37597359 - 37597322
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacatttta 81  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  37597359 ttataaccaaatgatgaaatacttagaatgacatttta 37597322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 43094704 - 43094753
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||||| ||||  |||||||||||||| |||||||||||    
T  43094704 ttataacaaaatgatgaaatactaagaatgacattttaagataaactatt 43094753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 15055 - 15019
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  15055 caggaaagaatattggatggattgagtcttggagcaa 15019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 14545197 - 14545233
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  14545197 caggaaagaatattggatggattgagtcttggagcaa 14545233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 14551437 - 14551473
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  14551437 caggaaagaatattggatggattgagtcttggagcaa 14551473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 15175973 - 15176009
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||| | |||||||||||    
T  15175973 cagggaagaatattggatggattaagtcttggagcaa 15176009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 16119726 - 16119690
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  16119726 caggaaagaatattggatggattgagtcttggagcaa 16119690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 16155335 - 16155299
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  16155335 caggaaagaatattggatggattgagtcttggagcaa 16155299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 18287940 - 18287976
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  18287940 caggaaagaatattggatggattgagtcttggagcaa 18287976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 19015024 - 19014988
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  19015024 cagggaagaatattggatggagtgagtcttggagcaa 19014988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 23077635 - 23077599
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  23077635 caggaaagaatattggatggattgagtcttggagcaa 23077599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 39387510 - 39387546
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  39387510 caggaaagaatattcgatggattgaatcttggagcaa 39387546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000005; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 21381532 - 21381483
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||| | |||| ||||||||||||||| |||||||||||    
T  21381532 ttataaccaaatgataaaatacttagaatgacattttaagataaactatt 21381483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 21955628 - 21955677
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| |||||||| |||||| |||||||||||    
T  21955628 ttataaccaaatgatgaaatacttagaatgatattttaagataaactatt 21955677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 18461002 - 18461038
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  18461002 cagggaagaatattggatggattgagtcttggagcaa 18461038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 19075721 - 19075685
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  19075721 caggaaagaatattggatggattgaatcttggagcaa 19075685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 20022672 - 20022636
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  20022672 cagggaagaatattggatggattgagtcttggagcaa 20022636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 20102209 - 20102245
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  20102209 cagggaagaatattggatggattgagtcttggagcaa 20102245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 22165426 - 22165390
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  22165426 cagggaagaatattggatggattgagtcttggagcaa 22165390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 23027742 - 23027778
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  23027742 cagggaagaatattggatggattgagtcttggagcaa 23027778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 12650164 - 12650115
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||| ||||||||| |||| || |||||||||||| |||||||||||    
T  12650164 ttataacaaaatgatgaaatacttaaaatgacattttaagataaactatt 12650115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 15693225 - 15693261
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  15693225 caggaaagaatattggatggattgagtcttggagcaa 15693261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 15699893 - 15699929
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  15699893 caggaaagaatattggatggattgagtcttggagcaa 15699929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 16738454 - 16738490
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  16738454 caggaaagaatattggatggattgagtcttggagcaa 16738490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 22244150 - 22244186
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  22244150 caggaaagaatattggatggattgagtcttggagcaa 22244186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 23352430 - 23352466
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  23352430 caggaaagaatattggatggattgagtcttggagcaa 23352466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 31549279 - 31549243
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  31549279 caggaaagaatattcgatggattgaatcttggagcaa 31549243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000005; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 50679902 - 50679853
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||| |||||||| |||||| |||||||||||    
T  50679902 ttataaccaaatgatgaaatacttagaatgatattttaagataaactatt 50679853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 3727 - 3691
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  3727 cagggaagaatattggatggattgagtcttggagcaa 3691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 10684342 - 10684378
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  10684342 cagggaagaatattggatggattgagtcttggagcaa 10684378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 10897982 - 10898018
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  10897982 cagggaagaatattggatggattgagtcttggagcaa 10898018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 11496491 - 11496455
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  11496491 cagggaagaatattggatggattgagtcttggagcaa 11496455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 26292932 - 26292968
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  26292932 cagggaagaatattggatggattgagtcttggagcaa 26292968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 40845490 - 40845454
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  40845490 cagggaagaatattggatggattgagtcttggagcaa 40845454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 42709608 - 42709572
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  42709608 cagggaagaatattggatggattgagtcttggagcaa 42709572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Complemental strand, 8065 - 8036
Alignment:
Q  227 gaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||||||||    
T  8065 gaatattggatggattgaatcttggagcaa 8036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Original strand, 24970044 - 24970081
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacatttta 81  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  24970044 ttataaccaaatgatgaaatacttagaatgacatttta 24970081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 93
Target Start/End: Original strand, 35321555 - 35321604
Alignment:
Q  44 ttataaccaaatgatgacatacctagaatgacattttaggataaactatt 93  Q
    ||||||||||||||||| |||  |||||||||||||||  ||||||||||    
T  35321555 ttataaccaaatgatgaaatatttagaatgacattttaatataaactatt 35321604  T

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Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Complemental strand, 40567523 - 40567494
Alignment:
Q  227 gaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||||||||    
T  40567523 gaatattggatggattgaatcttggagcaa 40567494  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 13823251 - 13823287
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  13823251 caggaaagaatattggatggattgagtcttggagcaa 13823287  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 21420297 - 21420333
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  21420297 caggaaagaatattcgatggattgaatcttggagcaa 21420333  T

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Target: scaffold0414 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 85 - 49
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  85 caggaaagaatattggatggattgaatcttggagcaa 49  T

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Target: scaffold0409 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 3653 - 3689
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  3653 cagggaagaatattggatggattgagtcttggagcaa 3689  T

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Target: scaffold0409; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 11908 - 11944
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  11908 cagggaagaatattggatggattgagtcttggagcaa 11944  T

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Target: scaffold0404 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 1376 - 1412
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  1376 cagggaagaatattggatggattgagtcttggagcaa 1412  T

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Target: scaffold0404; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 3647 - 3683
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  3647 cagggaagaatattggatggattgagtcttggagcaa 3683  T

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Target: scaffold0213 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 8767 - 8803
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  8767 cagggaagaatattggatggattgagtcttggagcaa 8803  T

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Target: scaffold0134 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 42796 - 42832
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  42796 caggaaagaatattggatggattgaatcttggagcaa 42832  T

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Target: scaffold0112 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 4977 - 5013
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  4977 cagggaagaatattggatggattgagtcttggagcaa 5013  T

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Target: scaffold0104 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 45136 - 45172
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  45136 caggaaagaatattggatggattgaatcttggagcaa 45172  T

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Target: scaffold0084 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 43616 - 43652
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  43616 caggaaagaatattggatggattgaatcttggagcaa 43652  T

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Target: scaffold0075 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 36578 - 36542
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  36578 cagggaagaatattggatggattgagtcttggagcaa 36542  T

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Target: scaffold0074 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 34128 - 34092
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  34128 cagggaagaatattggatggattgagtcttggagcaa 34092  T

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Target: scaffold0029 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 117463 - 117499
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  117463 caggaaagaatattggatggattgaatcttggagcaa 117499  T

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Target: scaffold0029; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 225 - 256
Target Start/End: Original strand, 123712 - 123743
Alignment:
Q  225 aagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||||||||||    
T  123712 aagaatattggatggattgaatcttggagcaa 123743  T

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Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 168345 - 168381
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||||||||||||||||||||||||||    
T  168345 caggaaagaatattggatggattgaatcttggagcaa 168381  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 253713 - 253749
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||| |||||||||||    
T  253713 cagggaagaatattggatggattgagtcttggagcaa 253749  T

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Target: scaffold0802 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 256
Target Start/End: Complemental strand, 4186 - 4157
Alignment:
Q  227 gaatattggatggattgaatcttggagcaa 256  Q
    ||||||||||||||||||||||||||||||    
T  4186 gaatattggatggattgaatcttggagcaa 4157  T

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Target: scaffold0401 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 223 - 256
Target Start/End: Complemental strand, 35 - 2
Alignment:
Q  223 ggaagaatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||| |||||||||||    
T  35 ggaagaatattggatggattgagtcttggagcaa 2  T

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Target: scaffold0441 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0441
Description:

Target: scaffold0441; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 14548 - 14584
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  14548 caggaaagaatatttgatggattgaatcttggagcaa 14584  T

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Target: scaffold0142 (Bit Score: 29; Significance: 0.0000005; HSPs: 3)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 45 - 9
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  45 caggaaagaatattggatggattgagtcttggagcaa 9  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 3579 - 3543
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  3579 caggaaagaatattggatggattgagtcttggagcaa 3543  T

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Target: scaffold0142; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 12298 - 12262
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  12298 caggaaagaatattggatggattgagtcttggagcaa 12262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Complemental strand, 38631 - 38595
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  38631 caggaaagaatattggatggattgagtcttggagcaa 38595  T

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Target: scaffold0059 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 56081 - 56117
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  56081 caggaaagaatattggatggattgagtcttggagcaa 56117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 256
Target Start/End: Original strand, 117165 - 117193
Alignment:
Q  228 aatattggatggattgaatcttggagcaa 256  Q
    |||||||||||||||||||||||||||||    
T  117165 aatattggatggattgaatcttggagcaa 117193  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 522300 - 522336
Alignment:
Q  220 cagggaagaatattggatggattgaatcttggagcaa 256  Q
    |||| |||||||||||||||||||| |||||||||||    
T  522300 caggaaagaatattggatggattgagtcttggagcaa 522336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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