View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0854_low_48 (Length: 261)

Name: NF0854_low_48
Description: NF0854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0854_low_48
NF0854_low_48
[»] chr1 (41 HSPs)
chr1 (28-210)||(7889047-7889252)
chr1 (214-261)||(47544655-47544702)
chr1 (212-261)||(38261161-38261210)
chr1 (212-261)||(8396707-8396756)
chr1 (212-261)||(9588002-9588051)
chr1 (212-257)||(12105159-12105204)
chr1 (213-257)||(25702435-25702479)
chr1 (213-261)||(31821571-31821619)
chr1 (213-261)||(46641875-46641923)
chr1 (217-257)||(47693561-47693601)
chr1 (213-260)||(13202936-13202983)
chr1 (207-261)||(24003413-24003467)
chr1 (215-261)||(34038163-34038209)
chr1 (215-261)||(52180591-52180637)
chr1 (212-257)||(52345598-52345643)
chr1 (219-259)||(6966269-6966309)
chr1 (213-261)||(10408653-10408701)
chr1 (213-261)||(30320890-30320938)
chr1 (213-261)||(32144669-32144717)
chr1 (212-256)||(34100712-34100756)
chr1 (212-260)||(44264016-44264064)
chr1 (213-257)||(51787464-51787508)
chr1 (213-260)||(2249587-2249634)
chr1 (216-259)||(38718092-38718135)
chr1 (212-259)||(45622479-45622526)
chr1 (216-259)||(48760424-48760467)
chr1 (212-261)||(40054945-40054995)
chr1 (213-255)||(46362023-46362065)
chr1 (212-261)||(49982455-49982505)
chr1 (212-261)||(10348026-10348075)
chr1 (216-261)||(17525795-17525840)
chr1 (212-261)||(24230568-24230617)
chr1 (212-257)||(24511941-24511986)
chr1 (212-257)||(35305514-35305559)
chr1 (212-261)||(35873935-35873984)
chr1 (216-257)||(42275338-42275379)
chr1 (213-261)||(43916346-43916395)
chr1 (212-261)||(48976874-48976923)
chr1 (216-261)||(52861300-52861345)
chr1 (213-261)||(31530307-31530355)
chr1 (225-257)||(48796391-48796423)
[»] chr3 (39 HSPs)
chr3 (213-261)||(35501148-35501196)
chr3 (214-261)||(40474193-40474240)
chr3 (213-261)||(53289230-53289278)
chr3 (213-260)||(39987351-39987398)
chr3 (213-259)||(26850286-26850332)
chr3 (212-261)||(1129128-1129177)
chr3 (212-261)||(8966289-8966338)
chr3 (212-261)||(25834588-25834637)
chr3 (212-257)||(37520701-37520746)
chr3 (212-261)||(40478116-40478165)
chr3 (213-261)||(44379414-44379462)
chr3 (213-257)||(44653533-44653577)
chr3 (214-257)||(15997183-15997226)
chr3 (214-260)||(54428854-54428900)
chr3 (212-261)||(1021332-1021381)
chr3 (212-257)||(5529056-5529101)
chr3 (216-261)||(7862803-7862848)
chr3 (212-257)||(9252215-9252260)
chr3 (200-257)||(26884960-26885017)
chr3 (212-261)||(35137798-35137847)
chr3 (216-257)||(37127807-37127848)
chr3 (216-261)||(50029754-50029799)
chr3 (213-257)||(4817076-4817120)
chr3 (213-257)||(42621848-42621892)
chr3 (216-259)||(23456818-23456861)
chr3 (216-259)||(27045054-27045097)
chr3 (213-259)||(29388695-29388741)
chr3 (215-257)||(46507363-46507405)
chr3 (215-257)||(47746191-47746233)
chr3 (212-261)||(26456953-26457001)
chr3 (213-261)||(29698322-29698371)
chr3 (212-257)||(29806371-29806416)
chr3 (212-261)||(30349362-30349411)
chr3 (213-261)||(32121899-32121948)
chr3 (212-257)||(42479047-42479092)
chr3 (212-257)||(44365971-44366016)
chr3 (212-257)||(44522353-44522398)
chr3 (212-256)||(36220769-36220813)
chr3 (213-261)||(51344730-51344778)
[»] chr8 (24 HSPs)
chr8 (215-261)||(118168-118214)
chr8 (212-261)||(7128089-7128138)
chr8 (213-261)||(2261372-2261420)
chr8 (214-256)||(6982786-6982828)
chr8 (212-261)||(17792562-17792611)
chr8 (213-257)||(36672010-36672054)
chr8 (207-256)||(15231350-15231399)
chr8 (212-261)||(38210678-38210727)
chr8 (213-257)||(2749315-2749359)
chr8 (213-257)||(15451421-15451465)
chr8 (213-261)||(29454143-29454191)
chr8 (212-259)||(32887665-32887713)
chr8 (219-259)||(37675943-37675983)
chr8 (215-259)||(39646639-39646683)
chr8 (212-256)||(41720612-41720656)
chr8 (215-261)||(27172272-27172318)
chr8 (216-261)||(5328959-5329004)
chr8 (212-257)||(10706554-10706599)
chr8 (216-257)||(39300086-39300127)
chr8 (213-257)||(40547690-40547735)
chr8 (212-257)||(44000560-44000605)
chr8 (214-257)||(6804009-6804053)
chr8 (213-257)||(29265589-29265633)
chr8 (213-261)||(40776637-40776685)
[»] chr4 (29 HSPs)
chr4 (215-261)||(56303196-56303242)
chr4 (213-261)||(126936-126984)
chr4 (213-261)||(1857162-1857210)
chr4 (213-261)||(4720829-4720877)
chr4 (213-261)||(27990536-27990584)
chr4 (214-261)||(29364540-29364587)
chr4 (215-261)||(1433809-1433855)
chr4 (212-260)||(4491214-4491263)
chr4 (212-257)||(26118115-26118160)
chr4 (225-261)||(24535494-24535530)
chr4 (213-257)||(42177342-42177386)
chr4 (213-257)||(46663688-46663732)
chr4 (213-256)||(29582329-29582372)
chr4 (213-256)||(36631036-36631079)
chr4 (213-256)||(50776135-50776178)
chr4 (214-257)||(53936508-53936551)
chr4 (214-260)||(54996462-54996508)
chr4 (216-257)||(408425-408466)
chr4 (213-261)||(19527081-19527130)
chr4 (215-256)||(24979944-24979985)
chr4 (212-261)||(28835787-28835836)
chr4 (212-257)||(30060529-30060574)
chr4 (212-257)||(30348162-30348207)
chr4 (216-257)||(31999087-31999128)
chr4 (213-260)||(4695666-4695714)
chr4 (213-257)||(23058765-23058809)
chr4 (213-261)||(33491162-33491210)
chr4 (213-257)||(34829085-34829129)
chr4 (213-257)||(45692622-45692666)
[»] chr2 (19 HSPs)
chr2 (211-261)||(25331453-25331503)
chr2 (212-261)||(7673294-7673343)
chr2 (212-261)||(32602302-32602351)
chr2 (212-259)||(9589474-9589521)
chr2 (212-261)||(35895310-35895359)
chr2 (215-257)||(6945704-6945746)
chr2 (213-259)||(21404198-21404244)
chr2 (216-261)||(17451285-17451330)
chr2 (212-257)||(32401078-32401123)
chr2 (213-261)||(9122156-9122204)
chr2 (212-257)||(2859358-2859404)
chr2 (212-261)||(41555430-41555480)
chr2 (215-257)||(45157876-45157918)
chr2 (212-257)||(1580246-1580291)
chr2 (212-257)||(3261268-3261313)
chr2 (213-261)||(15362469-15362518)
chr2 (212-257)||(38617727-38617772)
chr2 (212-259)||(8333890-8333938)
chr2 (213-261)||(43439995-43440043)
[»] chr6 (24 HSPs)
chr6 (212-261)||(23416855-23416904)
chr6 (212-261)||(4509787-4509836)
chr6 (212-257)||(8858031-8858076)
chr6 (211-257)||(29023617-29023663)
chr6 (211-257)||(33574715-33574761)
chr6 (211-257)||(33574893-33574939)
chr6 (213-261)||(1705963-1706012)
chr6 (212-257)||(8549562-8549607)
chr6 (212-257)||(9662120-9662165)
chr6 (213-261)||(14507978-14508027)
chr6 (212-261)||(23069058-23069107)
chr6 (213-257)||(242885-242929)
chr6 (213-261)||(3141040-3141088)
chr6 (213-257)||(4576747-4576791)
chr6 (225-261)||(33574245-33574281)
chr6 (213-259)||(10887809-10887856)
chr6 (214-261)||(11763174-11763221)
chr6 (219-261)||(2565409-2565451)
chr6 (212-261)||(10965981-10966031)
chr6 (212-261)||(21294147-21294197)
chr6 (213-261)||(2994322-2994371)
chr6 (212-257)||(14779265-14779310)
chr6 (212-257)||(21970669-21970714)
chr6 (213-257)||(31644410-31644454)
[»] chr5 (23 HSPs)
chr5 (212-257)||(6260380-6260425)
chr5 (213-261)||(33678516-33678564)
chr5 (212-257)||(29960229-29960274)
chr5 (215-259)||(9604433-9604477)
chr5 (214-257)||(702312-702355)
chr5 (216-259)||(9910042-9910085)
chr5 (214-261)||(28318348-28318395)
chr5 (214-257)||(40563116-40563159)
chr5 (227-261)||(9913203-9913237)
chr5 (212-257)||(2852060-2852105)
chr5 (212-257)||(32455656-32455701)
chr5 (212-257)||(36427904-36427949)
chr5 (216-261)||(40803679-40803724)
chr5 (213-257)||(13127343-13127387)
chr5 (213-261)||(17069343-17069391)
chr5 (213-260)||(14434818-14434865)
chr5 (216-255)||(33210734-33210773)
chr5 (214-257)||(39816506-39816549)
chr5 (212-261)||(39939032-39939082)
chr5 (216-261)||(13119157-13119202)
chr5 (212-257)||(42486604-42486649)
chr5 (225-257)||(30753459-30753491)
chr5 (213-249)||(42597474-42597510)
[»] chr7 (25 HSPs)
chr7 (212-257)||(15954623-15954668)
chr7 (212-257)||(26605055-26605100)
chr7 (212-261)||(46575100-46575149)
chr7 (215-259)||(15716266-15716310)
chr7 (212-259)||(18520275-18520322)
chr7 (214-261)||(23406653-23406700)
chr7 (214-257)||(35291327-35291370)
chr7 (213-255)||(23561475-23561517)
chr7 (212-261)||(29688923-29688973)
chr7 (212-258)||(38665456-38665502)
chr7 (213-258)||(3214887-3214932)
chr7 (212-257)||(43631054-43631099)
chr7 (213-257)||(2291142-2291186)
chr7 (213-257)||(6791444-6791488)
chr7 (213-261)||(7574551-7574599)
chr7 (213-261)||(28264750-28264798)
chr7 (215-257)||(17306603-17306645)
chr7 (212-261)||(21919687-21919737)
chr7 (212-254)||(35358068-35358110)
chr7 (213-254)||(1269008-1269049)
chr7 (213-261)||(5215382-5215431)
chr7 (216-257)||(41968435-41968476)
chr7 (213-261)||(48460251-48460300)
chr7 (214-257)||(2089224-2089268)
chr7 (213-249)||(29606268-29606304)
[»] scaffold0923 (1 HSPs)
scaffold0923 (213-261)||(43-91)
[»] scaffold1319 (1 HSPs)
scaffold1319 (213-261)||(43-91)
[»] scaffold0667 (1 HSPs)
scaffold0667 (213-261)||(191-239)


Alignment Details
Target: chr1 (Bit Score: 123; Significance: 3e-63; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 28 - 210
Target Start/End: Original strand, 7889047 - 7889252
Alignment:
Q  28 cagaaagttcaacatatatgtatatcactggtgttatatcaagtgaaacatcatttcacgaagc----------cttaaattaaaagttcaaaaccgctt 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||    
T  7889047 cagaaagttcaacatatatgtatatcagtggtgttatatcaagtgaaacatcatttcacgaagcatcacgaagccttaaattaaaagttcaaaaccgctt 7889146  T
Q  118 gagtcaggactttggaggaaaacg-------------ttttaaataaccaatcatattacttgcaaatgcaccttaaccttacaataatatgattgtgtt 204  Q
    ||||||||||||||||||||||||             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7889147 gagtcaggactttggaggaaaacgcggtaggaaaacattttaaataaccaatcatattacttgcaaatgcaccttaaccttacaataatatgattgtgtt 7889246  T
Q  205 atttta 210  Q
    ||||||    
T  7889247 atttta 7889252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 47544702 - 47544655
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  47544702 ggaacttctatggtacactcacaaaatgaggtgtaccggtactcctgc 47544655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 38261210 - 38261161
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||||    
T  38261210 agggaacttctacggtacactcataaagtgaggtgtaccggtactcctgc 38261161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 8396756 - 8396707
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  8396756 agggaatttctacggtacactcataaaatgaggtgtatcggtactcctgc 8396707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 9588051 - 9588002
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||||||| |||||| |||||||||||||||    
T  9588051 agggaacttctacggtacactcataaagtgaggtataccggtactcctgc 9588002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 12105159 - 12105204
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||    
T  12105159 agggaacttctacggtacactcacaaaatgaggtgtaccggtactc 12105204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 25702435 - 25702479
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||    
T  25702435 gggaacttctacggtacactcataaattgaggtgtaccggtactc 25702479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 31821571 - 31821619
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  31821571 gggaacttctacggtacactcacaaaatgaggtgtagcggtactcctgc 31821619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 46641923 - 46641875
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||    
T  46641923 gggaacttctacggtacactcgcaaaatgaggtgtaccggtactcctgc 46641875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 47693601 - 47693561
Alignment:
Q  217 acttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  47693601 acttctatggtacactcacaaaatgaggtgtaccggtactc 47693561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 13202936 - 13202983
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctg 260  Q
    |||||||||||  ||||||||| |||||||||||||||||||||||||    
T  13202936 gggaacttctactgtacactcagaaaatgaggtgtaccggtactcctg 13202983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 261
Target Start/End: Original strand, 24003413 - 24003467
Alignment:
Q  207 tttacagggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||| ||||||||||| |||||||| | |||||||||||| |||||||||||||    
T  24003413 tttactgggaacttctacggtacactaacaaaatgaggtgttccggtactcctgc 24003467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 34038163 - 34038209
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  34038163 gaacttctacggtacactcacaaagtgaggtgtaccggtactcctgc 34038209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 52180637 - 52180591
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||    
T  52180637 gaacttctatggtatactcacaaagtgaggtgtaccggtactcctgc 52180591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 52345598 - 52345643
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||    
T  52345598 agggaacttctacggtacactcacaaagtgaggtgtaccggtactc 52345643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 6966309 - 6966269
Alignment:
Q  219 ttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  6966309 ttctacggtacactcacaaaatgaggtgtaccggtactcct 6966269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 10408701 - 10408653
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||| ||||    
T  10408701 gggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgc 10408653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 30320890 - 30320938
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||||| |||||| |||||||||| |||||||||    
T  30320890 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgc 30320938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 32144669 - 32144717
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||||||||||| | ||||||| ||||| ||||||    
T  32144669 gggaacttctatggtacactcataaattaaggtgtatcggtattcctgc 32144717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 256
Target Start/End: Original strand, 34100712 - 34100756
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtact 256  Q
    |||||||||||||||||||||  |||| |||||||||||||||||    
T  34100712 agggaacttctatggtacacttgtaaattgaggtgtaccggtact 34100756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 44264064 - 44264016
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctg 260  Q
    ||||||| |||| |||||||||| ||| |||||||||||||||||||||    
T  44264064 agggaacatctacggtacactcacaaagtgaggtgtaccggtactcctg 44264016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 51787464 - 51787508
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| ||||||||||||| |||||||||| ||||||||    
T  51787464 gggaacttctacggtacactcataagatgaggtgtatcggtactc 51787508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 2249587 - 2249634
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctg 260  Q
    ||||||||||  |||||||||| ||||||||||||| |||||||||||    
T  2249587 gggaacttctgcggtacactcacaaaatgaggtgtatcggtactcctg 2249634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 38718135 - 38718092
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    |||||||| |||||||||| ||||||||||||| ||||||||||    
T  38718135 aacttctacggtacactcacaaaatgaggtgtatcggtactcct 38718092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 45622479 - 45622526
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    ||||||||| || | |||||||| ||||||||||||||||||||||||    
T  45622479 agggaacttatacgttacactcacaaaatgaggtgtaccggtactcct 45622526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 48760467 - 48760424
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    |||||||| |||||||||| |||||||||| |||||||||||||    
T  48760467 aacttctacggtacactcacaaaatgaggtataccggtactcct 48760424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 40054995 - 40054945
Alignment:
Q  212 agggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  40054995 agggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgc 40054945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 255
Target Start/End: Original strand, 46362023 - 46362065
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtac 255  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||    
T  46362023 gggaacttctacggtacattcacaaaatgaggtgtaccggtac 46362065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 49982455 - 49982505
Alignment:
Q  212 agggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| ||||||| ||||||| |||||||||||| |||||||||    
T  49982455 agggaacttctacggtacacctcataaattgaggtgtaccgatactcctgc 49982505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 10348026 - 10348075
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||| ||||| | |||||||| |||||||||    
T  10348026 agggaacttctacggtacactcacaaaataaagtgtaccgatactcctgc 10348075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 17525840 - 17525795
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||||||| ||||||| | ||||||| ||||||||||||    
T  17525840 aacttctatggtacattcataaattaaggtgtatcggtactcctgc 17525795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 24230568 - 24230617
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||| ||| |||||||||  |||||||||||    
T  24230568 agggaacttctacggtacactcacaaagtgaggtgtaatggtactcctgc 24230617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 24511986 - 24511941
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||| ||||| ||||||||| |||| ||||||||||||||||||    
T  24511986 agggaatttctacggtacactcgtaaattgaggtgtaccggtactc 24511941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 35305559 - 35305514
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| ||||||||| |||| | ||||||||||||||||    
T  35305559 agggaacttctacggtacactcgtaaattaaggtgtaccggtactc 35305514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 35873935 - 35873984
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||| ||| |||| |||||||||||| ||||    
T  35873935 agggaacttctacggtacactcacaaagtgagatgtaccggtacttctgc 35873984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 42275338 - 42275379
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||| |||||||||| ||| ||||||||||||||||||    
T  42275338 aacttctaaggtacactcagaaagtgaggtgtaccggtactc 42275379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 43916346 - 43916395
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  43916346 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgc 43916395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 48976874 - 48976923
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| || ||||||| ||| ||||||||| ||||||||||||    
T  48976874 agggaacttctacggcacactcacaaagtgaggtgtatcggtactcctgc 48976923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 52861300 - 52861345
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||| || |||||||||| ||||||||||||||||||||| ||||    
T  52861300 aacttttacggtacactcacaaaatgaggtgtaccggtacttctgc 52861345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 31530307 - 31530355
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||  ||||||| | |||||||||||||| |||||||||||    
T  31530307 gggaacttctaccgtacacttacaaaatgaggtgtactggtactcctgc 31530355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 257
Target Start/End: Complemental strand, 48796423 - 48796391
Alignment:
Q  225 ggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||| |||||||||||||||||||||||    
T  48796423 ggtacactcgtaaaatgaggtgtaccggtactc 48796391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 35501196 - 35501148
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35501196 gggaacttctatggtacactcacaaaatgaggtgtaccggtactcctgc 35501148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 40474240 - 40474193
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40474240 ggaacttctatggtacactcataaagtgaggtgtaccggtactcctgc 40474193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 53289230 - 53289278
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  53289230 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgc 53289278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 39987351 - 39987398
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctg 260  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||    
T  39987351 gggaacttctacgggacactcataaaatgaggtgtaccggtactcctg 39987398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 259
Target Start/End: Complemental strand, 26850332 - 26850286
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||    
T  26850332 gggaacttctatggtacacttataaaatgaggtgtatcggtactcct 26850286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 1129128 - 1129177
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  1129128 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgc 1129177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 8966338 - 8966289
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||||||| | ||||||||||||||||||||    
T  8966338 agggaacttctacggtacactcataaattaaggtgtaccggtactcctgc 8966289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 25834637 - 25834588
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||||||    
T  25834637 agggaacttctacggtacactcataaagtgagatgtaccggtactcctgc 25834588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 37520701 - 37520746
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||    
T  37520701 agggaacttctacggtacactcacaaaatgaggtgtaccggtactc 37520746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 40478165 - 40478116
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  40478165 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgc 40478116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 44379414 - 44379462
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  44379414 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgc 44379462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 44653577 - 44653533
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||    
T  44653577 gggaacttctacggtacactcacaaaatgaggtgtaccggtactc 44653533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 15997226 - 15997183
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||| ||||||||||||| |||||||||||||||||||    
T  15997226 ggaacttctacggtacactcataagatgaggtgtaccggtactc 15997183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 54428900 - 54428854
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactcctg 260  Q
    ||||||||||  |||||||||||||||||||||||||| ||||||||    
T  54428900 ggaacttctactgtacactcataaaatgaggtgtaccgatactcctg 54428854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 1021381 - 1021332
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| | |||||||| ||||||||||||| ||||||||||||    
T  1021381 agggaacttctacgatacactcacaaaatgaggtgtatcggtactcctgc 1021332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 5529101 - 5529056
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||| |||||| ||||||||| |||||||||||||||||||||||    
T  5529101 agggagcttctacggtacactcttaaaatgaggtgtaccggtactc 5529056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 7862848 - 7862803
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||||    
T  7862848 aacttctatggtacattcacaaagtgaggtgtaccggtactcctgc 7862803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 9252260 - 9252215
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| ||||||||| |||| ||||||||||||||||||    
T  9252260 agggaacttctacggtacactcgtaaattgaggtgtaccggtactc 9252215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 26884960 - 26885017
Alignment:
Q  200 gtgttattttacagggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||   ||||||||||| |||||||||| || |||||||||||||||||||    
T  26884960 gtgttattttttggggaacttctacggtacactcacaagatgaggtgtaccggtactc 26885017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 35137847 - 35137798
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| ||||||||| |||||| |||||||||| |||||||||    
T  35137847 agggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgc 35137798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 37127807 - 37127848
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||| |||||||||||||||||||||||||| ||||||    
T  37127807 aacttctacggtacactcataaaatgaggtgtaccagtactc 37127848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 50029754 - 50029799
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||||||||||||||| | ||||||| ||||||||||||    
T  50029754 aacttctatggtacactcataaactaaggtgtatcggtactcctgc 50029799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 4817076 - 4817120
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||    
T  4817076 gggaatttctacggtacactcacaaaatgaggtgtaccggtactc 4817120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 42621848 - 42621892
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||    
T  42621848 gggaacttctacggtacactcacaaaatgaggtgtaccagtactc 42621892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 23456861 - 23456818
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||    
T  23456861 aacttctacggtacactcacaaagtgaggtgtaccggtactcct 23456818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 259
Target Start/End: Complemental strand, 27045097 - 27045054
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||    
T  27045097 aacttctacggtacactcacaaaatgaggtgcaccggtactcct 27045054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 29388695 - 29388741
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    ||||||||||| |||| ||||| ||||||||||||||| ||||||||    
T  29388695 gggaacttctacggtatactcacaaaatgaggtgtaccagtactcct 29388741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 46507363 - 46507405
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||| |||||||||| ||||||||||||| ||||||||    
T  46507363 gaacttctacggtacactcacaaaatgaggtgtatcggtactc 46507405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 47746233 - 47746191
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||| |||||||||| |||||||||||||||| |||||    
T  47746233 gaacttctacggtacactcacaaaatgaggtgtaccgatactc 47746191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 26456953 - 26457001
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| | |||||||||||| ||||||| ||||||||||||||    
T  26456953 agggaacttctacg-tacactcataaagtgaggtgaaccggtactcctgc 26457001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 29698322 - 29698371
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  29698322 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgc 29698371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 29806416 - 29806371
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||  ||| ||||||||||||||||||    
T  29806416 agggaacttctacggtacactcgcaaattgaggtgtaccggtactc 29806371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 30349411 - 30349362
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||| ||||||| ||||| ||||||| ||||    
T  30349411 agggaacttctacggtacactcacaaaatgaagtgtatcggtacttctgc 30349362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 32121899 - 32121948
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  32121899 gggaacttctacggtacacctcacaaagtgaggtgtaccggtactcctgc 32121948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 42479092 - 42479047
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||| ||| ||||| ||||||||||||||||    
T  42479092 agggaacttctacggtacattcacaaaataaggtgtaccggtactc 42479047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 44366016 - 44365971
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||||||||||| | |||| | ||||||||||||||||    
T  44366016 agggaacttctatggtacacccgtaaattaaggtgtaccggtactc 44365971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 44522398 - 44522353
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||| |||||| ||||||||| |||||||||||||||| |||||    
T  44522398 agggaatttctatagtacactcacaaaatgaggtgtaccgatactc 44522353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 36220813 - 36220769
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtact 256  Q
    |||||||||||| |||||||||| ||| |||||||||||| ||||    
T  36220813 agggaacttctacggtacactcacaaagtgaggtgtaccgatact 36220769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 51344778 - 51344730
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||| | ||| | ||||||||||||||||||||    
T  51344778 gggaacttctacggtacacttacaaagtaaggtgtaccggtactcctgc 51344730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 118214 - 118168
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||    
T  118214 gaacttctatggtacactcacaaaatgaggtgtaccggtactcctgc 118168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 7128089 - 7128138
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  7128089 agggaacttctatggtacactcacaaaatgaggtgtaccgatactcctgc 7128138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 2261420 - 2261372
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  2261420 gggaacttctatggtacactcacaaagtgaggtgtaccggtactcctgc 2261372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 256
Target Start/End: Original strand, 6982786 - 6982828
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtact 256  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  6982786 ggaacttctatggtacactcataaaatgaggtgtatcggtact 6982828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 17792611 - 17792562
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||||||    
T  17792611 agggaacttctatggtacactcataaattaaggtgtatcggtactcctgc 17792562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 36672010 - 36672054
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||    
T  36672010 gggaacttctatggtacactcgtaaattgaggtgtaccggtactc 36672054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 256
Target Start/End: Complemental strand, 15231399 - 15231350
Alignment:
Q  207 tttacagggaacttctatggtacactcataaaatgaggtgtaccggtact 256  Q
    |||| ||| |||||||| |||||||||||||| |||||||||||||||||    
T  15231399 tttaaaggaaacttctacggtacactcataaagtgaggtgtaccggtact 15231350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 38210727 - 38210678
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| ||||||||| |||||| |||||||||| |||||||||    
T  38210727 agggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgc 38210678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 2749315 - 2749359
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||    
T  2749315 gggaacttctacggtaaactcacaaaatgaggtgtaccggtactc 2749359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 15451421 - 15451465
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||||| |||||||| || |||||||||||||||||||    
T  15451421 gggaacttctatgttacactcacaagatgaggtgtaccggtactc 15451465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 29454143 - 29454191
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||| ||| | ||||||||||||||||||||    
T  29454143 gggaacttctacggtacactcacaaagtaaggtgtaccggtactcctgc 29454191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 32887665 - 32887713
Alignment:
Q  212 agggaacttctatggtaca-ctcataaaatgaggtgtaccggtactcct 259  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  32887665 agggaacttctacggtacatctcataaattgaggtgtaccggtactcct 32887713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 219 - 259
Target Start/End: Original strand, 37675943 - 37675983
Alignment:
Q  219 ttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  37675943 ttctacggtacactcacaaaatgaggtgtaccggtactcct 37675983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 39646639 - 39646683
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    ||||||||| |||||||| ||||||| ||||||||||||||||||    
T  39646639 gaacttctacggtacacttataaaataaggtgtaccggtactcct 39646683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 212 - 256
Target Start/End: Complemental strand, 41720656 - 41720612
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtact 256  Q
    |||||||||||| |||||||||| |||||||||| ||||||||||    
T  41720656 agggaacttctacggtacactcacaaaatgaggtataccggtact 41720612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 27172318 - 27172272
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||| ||||| | ||||||| ||||||||||||    
T  27172318 gaacttctatggtacactaataaattaaggtgtatcggtactcctgc 27172272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 5329004 - 5328959
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||| |||||| | |||||||||||||| |||||||||||||    
T  5329004 aacttctacggtacatttataaaatgaggtgtcccggtactcctgc 5328959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 10706554 - 10706599
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| ||| |||||||||| |||||||    
T  10706554 agggaacttctacggtacactcacaaagtgaggtgtactggtactc 10706599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 39300086 - 39300127
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||| || |||||||||| ||||||||||||||||||||||    
T  39300086 aacttttacggtacactcacaaaatgaggtgtaccggtactc 39300127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 40547690 - 40547735
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||||||||||| | | ||||||||||||||||||||||    
T  40547690 gggaacttctatggtacacctaacaaaatgaggtgtaccggtactc 40547735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 44000560 - 44000605
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||| |||||| |||||||||| ||||||||||||| ||||||||    
T  44000560 agggatcttctacggtacactcacaaaatgaggtgtatcggtactc 44000605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 6804009 - 6804053
Alignment:
Q  214 ggaacttctatggtacac-tcataaaatgaggtgtaccggtactc 257  Q
    ||||| |||||||||||| ||||||| ||||||||||||||||||    
T  6804009 ggaacatctatggtacacctcataaattgaggtgtaccggtactc 6804053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 29265589 - 29265633
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||  ||||||||| ||| ||||||||||||||||||    
T  29265589 gggaacttctactgtacactcacaaagtgaggtgtaccggtactc 29265633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 40776637 - 40776685
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||| |||||||||||||||| ||| |||| ||||||| |||||||||    
T  40776637 gggaatttctatggtacactcacaaagtgagatgtaccgatactcctgc 40776685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 261
Target Start/End: Complemental strand, 56303242 - 56303196
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  56303242 gaacttctatggtacactcataaagtgaggtgtaccggtactcctgc 56303196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 126984 - 126936
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  126984 gggaacttctacggtacactcataaaatgaggtgtatcggtactcctgc 126936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 1857210 - 1857162
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  1857210 gggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgc 1857162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 4720877 - 4720829
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||| || |||||||||||||||||||||||| ||||||||||||    
T  4720877 gggaacttatacggtacactcataaaatgaggtgtatcggtactcctgc 4720829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 27990536 - 27990584
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||||||    
T  27990536 gggaacttctacgatacactcacaaaatgaggtgtaccggtactcctgc 27990584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Complemental strand, 29364587 - 29364540
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  29364587 ggaacttctactgtacactcacaaaatgaggtgtaccggtactcctgc 29364540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 1433809 - 1433855
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||||||||| | ||||||||||||| ||||||    
T  1433809 gaacttctatggtacactcataaattaaggtgtaccggtattcctgc 1433855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Complemental strand, 4491263 - 4491214
Alignment:
Q  212 agggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctg 260  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  4491263 agggaacttctacggtacacctcataaattgaggtgtaccggtactcctg 4491214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 26118160 - 26118115
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| || |||||||||||||||||||    
T  26118160 agggaacttctacggtacactcacaagatgaggtgtaccggtactc 26118115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 24535494 - 24535530
Alignment:
Q  225 ggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||| ||||||||||||||||||||||||||    
T  24535494 ggtacactcacaaaatgaggtgtaccggtactcctgc 24535530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 42177342 - 42177386
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||    
T  42177342 gggaacttctacggtacactcacaaaatgaggtgtatcggtactc 42177386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 46663732 - 46663688
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| ||||||||| |||| ||||||||||||||||||    
T  46663732 gggaacttctacggtacactcgtaaattgaggtgtaccggtactc 46663688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 29582372 - 29582329
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtact 256  Q
    ||||||||||| |||||||||| ||| |||||||||||||||||    
T  29582372 gggaacttctacggtacactcacaaattgaggtgtaccggtact 29582329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 256
Target Start/End: Original strand, 36631036 - 36631079
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtact 256  Q
    ||||||||||| |||||||||| ||||||||||||| |||||||    
T  36631036 gggaacttctacggtacactcacaaaatgaggtgtaacggtact 36631079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 256
Target Start/End: Complemental strand, 50776178 - 50776135
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtact 256  Q
    ||||||||||| |||||||| ||||||||||||||| |||||||    
T  50776178 gggaacttctacggtacacttataaaatgaggtgtatcggtact 50776135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 53936508 - 53936551
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||| ||||||||||||| |||||||||| ||||||||    
T  53936508 ggaacttctacggtacactcataagatgaggtgtatcggtactc 53936551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 260
Target Start/End: Complemental strand, 54996508 - 54996462
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactcctg 260  Q
    ||||||||||| ||||| ||||||| ||||||||| |||||||||||    
T  54996508 ggaacttctatagtacattcataaagtgaggtgtaacggtactcctg 54996462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 408466 - 408425
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||| ||||||||| |||| ||||||||||||||||||    
T  408466 aacttctacggtacactcgtaaattgaggtgtaccggtactc 408425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 19527130 - 19527081
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  19527130 gggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgc 19527081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 215 - 256
Target Start/End: Original strand, 24979944 - 24979985
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtact 256  Q
    ||||||||| |||||||||| ||||| |||||||||||||||    
T  24979944 gaacttctacggtacactcacaaaataaggtgtaccggtact 24979985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 28835787 - 28835836
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||| || |||||||||| ||||||||||| || |||||||||||    
T  28835787 agggaacttttacggtacactcacaaaatgaggtgaactggtactcctgc 28835836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 30060529 - 30060574
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| ||||||||| |||| |||||||||||| |||||    
T  30060529 agggaacttctacggtacactcgtaaattgaggtgtaccgatactc 30060574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 30348162 - 30348207
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||| ||| |||||| ||| ||||||||||||||||||||||    
T  30348162 agggaactactacggtacaatcacaaaatgaggtgtaccggtactc 30348207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 31999128 - 31999087
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||| |||||||||||||| ||||||||| ||||||||    
T  31999128 aacttctacggtacactcataaagtgaggtgtatcggtactc 31999087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 260
Target Start/End: Complemental strand, 4695714 - 4695666
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctg 260  Q
    ||||||||||| ||||||| ||||||| ||||||| |||||||||||||    
T  4695714 gggaacttctagggtacacctcataaattgaggtgcaccggtactcctg 4695666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 23058765 - 23058809
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| |||||||||| ||| |||| |||||||||||||    
T  23058765 gggaacttctacggtacactcacaaagtgagatgtaccggtactc 23058809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 33491162 - 33491210
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||| ||| ||| |||| |||||||||||||||||    
T  33491162 gggaacttctacggtacattcacaaagtgagatgtaccggtactcctgc 33491210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 34829129 - 34829085
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||| ||||| |||||||||| || |||||||||||||||||||    
T  34829129 gggaatttctacggtacactcacaagatgaggtgtaccggtactc 34829085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 45692622 - 45692666
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| ||||||||| |||||| |||||||||| |||||    
T  45692622 gggaacttctacggtacactcgtaaaataaggtgtaccgatactc 45692666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 261
Target Start/End: Original strand, 25331453 - 25331503
Alignment:
Q  211 cagggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  25331453 cagggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgc 25331503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 7673294 - 7673343
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  7673294 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgc 7673343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 32602302 - 32602351
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  32602302 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgc 32602351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 9589521 - 9589474
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||    
T  9589521 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcct 9589474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 35895310 - 35895359
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||| || |||||||||||||| ||||||||||||||||||||||    
T  35895310 agggaacttttacggtacactcataaagtgaggtgtaccggtactcctgc 35895359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 6945746 - 6945704
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||| ||||||||||||| |||||||||||||||||||    
T  6945746 gaacttctacggtacactcataagatgaggtgtaccggtactc 6945704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 21404198 - 21404244
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||||    
T  21404198 gggaacttctacggtacactcacaaaatgaggtgtaccgatactcct 21404244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 261
Target Start/End: Original strand, 17451285 - 17451330
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||| |||||||||| ||||| ||||||||||||||||||||    
T  17451285 aacttctacggtacactcacaaaataaggtgtaccggtactcctgc 17451330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 32401078 - 32401123
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| || |||||||||||||||||||    
T  32401078 agggaacttctacggtacactcacaagatgaggtgtaccggtactc 32401123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 9122156 - 9122204
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||| ||||    
T  9122156 gggaacttctacggtacactcacaaaataaggtgtaccggtacttctgc 9122204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 2859358 - 2859404
Alignment:
Q  212 agggaacttctatggtaca-ctcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||    
T  2859358 agggaacttctacggtacatctcataaattgaggtgtaccggtactc 2859404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 41555430 - 41555480
Alignment:
Q  212 agggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  41555430 agggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgc 41555480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Complemental strand, 45157918 - 45157876
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||| |||||||||| |||||||||||||||| |||||    
T  45157918 gaacttctacggtacactcacaaaatgaggtgtaccgatactc 45157876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 1580246 - 1580291
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||| ||||| |||||||||| ||| ||||||||||||||||||    
T  1580246 agggaatttctacggtacactcacaaagtgaggtgtaccggtactc 1580291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 3261313 - 3261268
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||| ||||||| |||| |||||||||||||    
T  3261313 agggaacttctacggtacattcataaagtgagatgtaccggtactc 3261268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 15362469 - 15362518
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||| | ||||| ||||||||||||||||||||||    
T  15362469 gggaacttctacggtacaccttataaattgaggtgtaccggtactcctgc 15362518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 38617727 - 38617772
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||| | ||||||||| |||| ||||||||||||||||||    
T  38617727 agggaacttcaacggtacactcgtaaattgaggtgtaccggtactc 38617772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 259
Target Start/End: Original strand, 8333890 - 8333938
Alignment:
Q  212 agggaacttctatggtacac-tcataaaatgaggtgtaccggtactcct 259  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||||||||||    
T  8333890 agggaacttctacggtacacctcacaaattgaggtgtaccggtactcct 8333938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 43439995 - 43440043
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| || ||||||| |||||||||||||||| |||| ||||    
T  43439995 gggaacttctacggcacactcacaaaatgaggtgtaccgatacttctgc 43440043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 23416904 - 23416855
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  23416904 agggaacttctacggtacactcacaaaatgaggtgtaccggtactcctgc 23416855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 4509836 - 4509787
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  4509836 agggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgc 4509787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 8858076 - 8858031
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||    
T  8858076 agggaacttctatggtacactcataaaatgtggtgtacctgtactc 8858031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 29023617 - 29023663
Alignment:
Q  211 cagggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||||||    
T  29023617 cagggaacttctacggtacactcgtaaattgaggtgtaccggtactc 29023663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 33574761 - 33574715
Alignment:
Q  211 cagggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  33574761 cagggaacttctacggtacactcacaaagtgaggtgtaccggtactc 33574715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 33574939 - 33574893
Alignment:
Q  211 cagggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||||| |||||||||| ||| ||||||||||||||||||    
T  33574939 cagggaacttctacggtacactcacaaagtgaggtgtaccggtactc 33574893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 1706012 - 1705963
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  1706012 gggaacttctacggtacacctcataaattgaggtgtaccggtactcctgc 1705963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 8549562 - 8549607
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||    
T  8549562 agggaacttctacggtacactcacaaaatgaggtgtaccgatactc 8549607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 9662165 - 9662120
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| ||||||||||||| |||||||||| ||||||||    
T  9662165 agggaacttctacggtacactcataagatgaggtgtatcggtactc 9662120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 14508027 - 14507978
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  14508027 gggaacttctacggtacacctcataaattgaggtgtaccggtactcctgc 14507978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 23069107 - 23069058
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||| || |||||||||| ||| ||||||||||||||||||||||    
T  23069107 agggaacttttacggtacactcacaaagtgaggtgtaccggtactcctgc 23069058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 242885 - 242929
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| ||||||||||||| ||||||||||||| |||||    
T  242885 gggaacttctacggtacactcataagatgaggtgtaccgatactc 242929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 3141040 - 3141088
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||||||| |||||||||||||  | |||||||||    
T  3141040 gggaacttctatggtacactcacaaaatgaggtgtattgatactcctgc 3141088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 4576791 - 4576747
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||    
T  4576791 gggaacttctattgtagactcacaaaatgaggtgtaccggtactc 4576747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 261
Target Start/End: Original strand, 33574245 - 33574281
Alignment:
Q  225 ggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||| ||||||||||||||||||||||||||    
T  33574245 ggtacactcacaaaatgaggtgtaccggtactcctgc 33574281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 259
Target Start/End: Original strand, 10887809 - 10887856
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcct 259  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  10887809 gggaacttctacggtacacctcataaattgaggtgtaccggtactcct 10887856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 11763174 - 11763221
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||| |||||||||| | | ||||||||||||||||||||||    
T  11763174 ggaacttctacggtacactcacagagtgaggtgtaccggtactcctgc 11763221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 2565451 - 2565409
Alignment:
Q  219 ttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||  ||||||| ||||||||||||||||||||||    
T  2565451 ttctatggtactttcataaagtgaggtgtaccggtactcctgc 2565409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 10966031 - 10965981
Alignment:
Q  212 agggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  10966031 agggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgc 10965981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Complemental strand, 21294197 - 21294147
Alignment:
Q  212 agggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||| ||| ||||||| ||||||| ||||||||||||||||||||||    
T  21294197 agggaactcctacggtacacctcataaattgaggtgtaccggtactcctgc 21294147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 2994322 - 2994371
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||  |||||| ||||||| ||||||||||||||||||||||    
T  2994322 gggaacttctacagtacacctcataaattgaggtgtaccggtactcctgc 2994371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 14779310 - 14779265
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||||  ||||||||| ||||||||| ||||||||||||    
T  14779310 agggaacttctacagtacactcacaaaatgaggggtaccggtactc 14779265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 21970714 - 21970669
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||||||| |  |||||||||||||||    
T  21970714 agggaacttctacggtacactcataaattctggtgtaccggtactc 21970669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 31644410 - 31644454
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| ||||||||| |||| ||||||||| ||||||||    
T  31644410 gggaacttctacggtacactcgtaaattgaggtgtatcggtactc 31644454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 6260425 - 6260380
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  6260425 agggaacttctacggtacactcataaaatgaggtgtaccggtactc 6260380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 33678564 - 33678516
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  33678564 gggaacttctatggtacactcacaaaatgaggtgtatcggtactcctgc 33678516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 29960274 - 29960229
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||| || |||||||||||||||||||||||||||||||||    
T  29960274 agggaacttttacggtacactcataaaatgaggtgtaccggtactc 29960229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 259
Target Start/End: Original strand, 9604433 - 9604477
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  9604433 gaacttctacggtacactcacaaaatgaggtgtaccggtactcct 9604477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 702355 - 702312
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  702355 ggaacttctacggtacactcacaaaatgaggtgtaccggtactc 702312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 9910042 - 9910085
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  9910042 aacttctatggtacactcacaaaatgaggtgtaccgatactcct 9910085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 28318348 - 28318395
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||| |||||||| ||||||||||||||| ||||||||||||    
T  28318348 ggaacttctacggtacacttataaaatgaggtgtatcggtactcctgc 28318395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 40563116 - 40563159
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||| ||||||||||||||||||||||||||| |||||    
T  40563116 ggaacttctacggtacactcataaaatgaggtgtaccgatactc 40563159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 227 - 261
Target Start/End: Original strand, 9913203 - 9913237
Alignment:
Q  227 tacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||||||||||||||||||||    
T  9913203 tacactcataaaatgaggtgtaccggtactcctgc 9913237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 2852105 - 2852060
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| ||||||||||||| ||||||||    
T  2852105 agggaacttctacggtacactcacaaaatgaggtgtatcggtactc 2852060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 32455701 - 32455656
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||||    
T  32455701 agggaacttctatggtacactcataaattaaggtgtatcggtactc 32455656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 36427904 - 36427949
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||    
T  36427904 agggaacttctacggtacactcacaaagtgaggtgtaccggtactc 36427949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 40803724 - 40803679
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||| ||| |||||| ||||||||||||||||||||||||||    
T  40803724 aacttctacggtgcactcacaaaatgaggtgtaccggtactcctgc 40803679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 13127387 - 13127343
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| |||||| ||| ||||||||||||||||||||||    
T  13127387 gggaacttctacggtacattcacaaaatgaggtgtaccggtactc 13127343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 17069391 - 17069343
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||| ||||| |||| ||||||||||||||||||||||    
T  17069391 gggaacttctacggtgcactcgtaaattgaggtgtaccggtactcctgc 17069343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 260
Target Start/End: Original strand, 14434818 - 14434865
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctg 260  Q
    |||||||||||  ||||||||| ||||||||||||| |||||||||||    
T  14434818 gggaacttctactgtacactcacaaaatgaggtgtatcggtactcctg 14434865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 216 - 255
Target Start/End: Complemental strand, 33210773 - 33210734
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtac 255  Q
    |||||||| |||||||||| ||||||||||||||||||||    
T  33210773 aacttctacggtacactcacaaaatgaggtgtaccggtac 33210734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 39816506 - 39816549
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||| |||||||||| ||| ||||||||||||||||||    
T  39816506 ggaacttctacggtacactcacaaagtgaggtgtaccggtactc 39816549  T

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Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 39939032 - 39939082
Alignment:
Q  212 agggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  39939032 agggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgc 39939082  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 13119202 - 13119157
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||| |||||||| | ||| ||||||||||||||||||||||    
T  13119202 aacttctacggtacacttacaaagtgaggtgtaccggtactcctgc 13119157  T

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Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 42486604 - 42486649
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||| ||||| |||||||||| ||| ||||||||||||||||||    
T  42486604 agggaatttctacggtacactcacaaagtgaggtgtaccggtactc 42486649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 225 - 257
Target Start/End: Original strand, 30753459 - 30753491
Alignment:
Q  225 ggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||| ||||||||||||||||||||||    
T  30753459 ggtacactcacaaaatgaggtgtaccggtactc 30753491  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 42597474 - 42597510
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtac 249  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  42597474 gggaacttctacggtacactcacaaaatgaggtgtac 42597510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 15954668 - 15954623
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||    
T  15954668 agggaacttctacggtacactcacaaaatgaggtgtaccggtactc 15954623  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 26605055 - 26605100
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||    
T  26605055 agggaacttctacggtacactcacaaaatgaggtgtaccggtactc 26605100  T

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Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 46575100 - 46575149
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||||||    
T  46575100 agggaacttctacggtacattcacaaaatgaggtgtaccggtactcctgc 46575149  T

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Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 15716310 - 15716266
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||    
T  15716310 gaacttctacggtacactcacaaaatgaggtgtaccggtactcct 15716266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 259
Target Start/End: Complemental strand, 18520322 - 18520275
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcct 259  Q
    ||||||||| ||||||||||||| |||||||| |||||||||||||||    
T  18520322 agggaacttttatggtacactcacaaaatgagatgtaccggtactcct 18520275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 261
Target Start/End: Original strand, 23406653 - 23406700
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||    
T  23406653 ggaacttatacggtacactcacaaaatgaggtgtaccggtactcctgc 23406700  T

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Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 214 - 257
Target Start/End: Original strand, 35291327 - 35291370
Alignment:
Q  214 ggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||| |||||||||| ||||||||||||||||||||||    
T  35291327 ggaacttctacggtacactcacaaaatgaggtgtaccggtactc 35291370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 213 - 255
Target Start/End: Complemental strand, 23561517 - 23561475
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtac 255  Q
    ||||||||||||||||||||| |||| ||||||||||||||||    
T  23561517 gggaacttctatggtacactcgtaaattgaggtgtaccggtac 23561475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 29688923 - 29688973
Alignment:
Q  212 agggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| ||||||| ||||||| ||||||||||||||||||||||    
T  29688923 agggaacttctacggtacacctcataaattgaggtgtaccggtactcctgc 29688973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 212 - 258
Target Start/End: Original strand, 38665456 - 38665502
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactcc 258  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||    
T  38665456 agggaacttctacggtacactcacaaaatgaagtgtaccggtactcc 38665502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 258
Target Start/End: Complemental strand, 3214932 - 3214887
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcc 258  Q
    ||||||||||| |||||||||| ||| |||||||||||||||||||    
T  3214932 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcc 3214887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 212 - 257
Target Start/End: Original strand, 43631054 - 43631099
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||||||||||||| || | ||||||||||||||||||    
T  43631054 agggaacttctatggtacactcgtagattgaggtgtaccggtactc 43631099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Complemental strand, 2291186 - 2291142
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||    
T  2291186 gggagcttctacggtacactcgtaaaatgaggtgtaccggtactc 2291142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 257
Target Start/End: Original strand, 6791444 - 6791488
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    ||||||||||| |||||||| | ||||||||||||||||||||||    
T  6791444 gggaacttctacggtacacttacaaaatgaggtgtaccggtactc 6791488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 7574551 - 7574599
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||||| |||||| |||||||||| |||||||||    
T  7574551 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgc 7574599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 28264750 - 28264798
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||||| |||||| |||||||||| |||||||||    
T  28264750 gggaacttctacggtacactcgtaaaataaggtgtaccgatactcctgc 28264798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 215 - 257
Target Start/End: Original strand, 17306603 - 17306645
Alignment:
Q  215 gaacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||||||||||||||| ||| |||| |||||||||||||    
T  17306603 gaacttctatggtacactcacaaagtgagatgtaccggtactc 17306645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 261
Target Start/End: Original strand, 21919687 - 21919737
Alignment:
Q  212 agggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  21919687 agggaacttctacggtacacctcacaaattgaggtgtaccggtactcctgc 21919737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 254
Target Start/End: Complemental strand, 35358110 - 35358068
Alignment:
Q  212 agggaacttctatggtacactcataaaatgaggtgtaccggta 254  Q
    |||||| ||||| |||||||||| |||||||||||||||||||    
T  35358110 agggaatttctacggtacactcacaaaatgaggtgtaccggta 35358068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 1269008 - 1269049
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggta 254  Q
    ||||||||||||||| |||||| ||||||||||||| |||||    
T  1269008 gggaacttctatggttcactcacaaaatgaggtgtatcggta 1269049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 5215431 - 5215382
Alignment:
Q  213 gggaacttctatggtacac-tcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| ||||||| ||| ||| ||||||||||||||||||||||    
T  5215431 gggaacttctacggtacacatcacaaattgaggtgtaccggtactcctgc 5215382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 41968435 - 41968476
Alignment:
Q  216 aacttctatggtacactcataaaatgaggtgtaccggtactc 257  Q
    |||||||| |||||||||| ||||||||||||| ||||||||    
T  41968435 aacttctacggtacactcacaaaatgaggtgtatcggtactc 41968476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 48460251 - 48460300
Alignment:
Q  213 gggaacttctatggtaca-ctcataaaatgaggtgtaccggtactcctgc 261  Q
    |||||||||||||||||| |||| ||| |||||| |||||||||||||||    
T  48460251 gggaacttctatggtacacctcacaaattgaggtataccggtactcctgc 48460300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 214 - 257
Target Start/End: Complemental strand, 2089268 - 2089224
Alignment:
Q  214 ggaacttctatggtacac-tcataaaatgaggtgtaccggtactc 257  Q
    |||||||||| ||||||| | ||||||||||||||||||||||||    
T  2089268 ggaacttctacggtacacctaataaaatgaggtgtaccggtactc 2089224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 249
Target Start/End: Original strand, 29606268 - 29606304
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtac 249  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  29606268 gggaacttctacggtacactcacaaaatgaggtgtac 29606304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0923 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0923
Description:

Target: scaffold0923; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 91 - 43
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  91 gggaacttctacggtacactcacaaagtgaggtgtaccggtactcctgc 43  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1319 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1319
Description:

Target: scaffold1319; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Original strand, 43 - 91
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||| |||||||||||||  |||||||||||    
T  43 gggaacttctacggtacactcacaaaatgaggtgtattggtactcctgc 91  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0667 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0667
Description:

Target: scaffold0667; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 213 - 261
Target Start/End: Complemental strand, 239 - 191
Alignment:
Q  213 gggaacttctatggtacactcataaaatgaggtgtaccggtactcctgc 261  Q
    ||||||||||| |||||||||| ||| ||||||||||||||||| ||||    
T  239 gggaacttctacggtacactcacaaagtgaggtgtaccggtacttctgc 191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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