View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0856_high_163 (Length: 254)
Name: NF0856_high_163
Description: NF0856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0856_high_163 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 42450030 - 42450254
Alignment:
| Q |
1 |
aatatgggtctccaaaatctacacttaagaagccattggggaaagagaataaggttcaagttactaatatggtaagaggtggtgttagacgtttggatta |
100 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
42450030 |
aatatgggtctccaaaatctacacttaagaagccattggggaaagagaataaggttcaagttactaatatggtaagaggtggtgttagacgtttggatta |
42450129 |
T |
|
| Q |
101 |
tagtcctaagggaattttgaaatctaccacaaattcttctcctaagaatttgaaagggtctccattttctgcaagaagaaacagttttgggaatgagagt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
42450130 |
tagtcctaagggaattttgaaatctaccacaaattcttctcctaagaatttgaaagggtctccattttctgcaagaagaaacagttttgggaatgagagt |
42450229 |
T |
|
| Q |
201 |
gtgagaaaaagtcctggttctgttc |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
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|
| T |
42450230 |
gtgagaaaaagtcctggttctgttc |
42450254 |
T |
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