View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0856_high_180 (Length: 251)
Name: NF0856_high_180
Description: NF0856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0856_high_180 |
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Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 47025989 - 47026216
Alignment:
| Q |
11 |
aataacagttgctaatagttagatagataatatttaccgcttcgttaatagtttcaannnnnnncttttaactcaaattagttgagcagtccaactctag |
110 |
Q |
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| T |
47025989 |
aataacaattgctaatagttaaat---taatatttaccgcttcgttaatagtttcaatttttttcttttaactcaaattagttgagcagtccaactctgg |
47026085 |
T |
|
| Q |
111 |
aagaagatggatggtactcgatca--gagacagctcgtgcatacatactgatgcacgctgaagtatgaccctaacattcgttgccgttcaattcaaagat |
208 |
Q |
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|||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |
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| T |
47026086 |
aagaagatggatggtactcgatcaaagagacagctcgtgcttacatactgatgcacgctgaagtatgacactaatattcgttgccgttcaattcaaagat |
47026185 |
T |
|
| Q |
209 |
tgtcccccctcttcaatctcccccaccttca |
239 |
Q |
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|| |||||||||||||||||||||||||||| |
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| T |
47026186 |
tgccccccctcttcaatctcccccaccttca |
47026216 |
T |
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