View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0856_high_188 (Length: 246)
Name: NF0856_high_188
Description: NF0856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0856_high_188 |
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Alignment Details
Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 12 - 202
Target Start/End: Complemental strand, 10425623 - 10425433
Alignment:
| Q |
12 |
atcataggtaacaagttcatcccatgaccaattccaaaaggcctgtcatatttataacacagaaagtgtcaattaataaatggnnnnnnnnnnnnnnnnn |
111 |
Q |
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| T |
10425623 |
atcatagataacaagttcatcccatgaccaattccaaaaggcctgtcatatttataacacagaaagtgtcaattaataaatggttttctttttctttttt |
10425524 |
T |
|
| Q |
112 |
gacaaagaaaaatttatgtattagagaaggtacactctcatgcaaagctagaagatacactaatttcattaaggattattacattaaaggg |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
10425523 |
gacaaagaaaaatttatgtattagagaaggtacactctcatgcaaagctagaagatacactaatttcattaagggttattacattaaaggg |
10425433 |
T |
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