View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0856_high_84 (Length: 348)
Name: NF0856_high_84
Description: NF0856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0856_high_84 |
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Alignment Details
Target: chr6 (Bit Score: 140; Significance: 3e-73; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 34 - 189
Target Start/End: Complemental strand, 24629992 - 24629837
Alignment:
| Q |
34 |
gaacaccaaaacaaacaaccaaacgatactctaatacagccaaaaacctgacaaacaaataatgaggccgagatatacatgttaacacatacgcaaatcc |
133 |
Q |
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| T |
24629992 |
gaacaccaaaacaaacaaccaaacgataccctaattcagccaaaaacctgacaaacaaataatgaggccgagatatacatgttaacacatacgcaagtcc |
24629893 |
T |
|
| Q |
134 |
ctgcctcactacccattgaagacaggaaaaagaagctgaactccaaaagaaacacc |
189 |
Q |
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|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
24629892 |
ctgcctcactaccccttgaagacaggaaaaagaagctgaactccaaaagaaacacc |
24629837 |
T |
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