View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0856_low_148 (Length: 289)

Name: NF0856_low_148
Description: NF0856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0856_low_148
NF0856_low_148
[»] chr7 (1 HSPs)
chr7 (99-129)||(47031809-47031839)


Alignment Details
Target: chr7 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 129
Target Start/End: Original strand, 47031809 - 47031839
Alignment:
99 agatcccctgtagtgtcagtgttgataccac 129  Q
    |||||||||||||||||||||||||||||||    
47031809 agatcccctgtagtgtcagtgttgataccac 47031839  T

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