View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0856_low_169 (Length: 268)
Name: NF0856_low_169
Description: NF0856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0856_low_169 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 170; Significance: 3e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 47 - 268
Target Start/End: Original strand, 47025691 - 47025911
Alignment:
| Q |
47 |
ataaggtcatgggactagcacatctaacaaagatttccactcttttaagcagatcaaacactttattagaacttttgtttgtcttatacgatcttttgta |
146 |
Q |
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| T |
47025691 |
ataaggtcctgggactagcccatctaacaaagattgccactcttttaagcagatcaaacactttattagaactcttgtttgtcttatacgaacttttgta |
47025790 |
T |
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| Q |
147 |
gataaaagactattttagtttttgaatttatatttatgataaaaagttgtgatgtagttttagtaagagacatgaattttagtttttatttctttctctt |
246 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||| |||||||||||| |
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| T |
47025791 |
gataaaagactattttagtttttgaatttatatttatgataaaaagttgtgatgt-ggtttagtaagagacatgaatttcagtttttgtttctttctctt |
47025889 |
T |
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| Q |
247 |
gtcgatcggtttgtcatgtctt |
268 |
Q |
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| T |
47025890 |
gttcatcggtttgtcatatctt |
47025911 |
T |
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