View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0856_low_2 (Length: 959)

Name: NF0856_low_2
Description: NF0856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0856_low_2
NF0856_low_2
[»] chr2 (40 HSPs)
chr2 (30-901)||(4762885-4763760)
chr2 (767-894)||(26357575-26357699)
chr2 (769-885)||(4264167-4264280)
chr2 (768-883)||(33551078-33551190)
chr2 (771-885)||(33660458-33660569)
chr2 (770-882)||(13711465-13711574)
chr2 (771-897)||(36641988-36642111)
chr2 (768-886)||(35958908-35959023)
chr2 (768-885)||(19313851-19313965)
chr2 (769-885)||(4166922-4167035)
chr2 (771-897)||(3176941-3177064)
chr2 (830-882)||(5881597-5881649)
chr2 (821-885)||(27350028-27350092)
chr2 (767-897)||(37905707-37905833)
chr2 (771-885)||(43770929-43771039)
chr2 (769-897)||(11366459-11366584)
chr2 (769-897)||(19289401-19289521)
chr2 (769-897)||(19424706-19424831)
chr2 (769-883)||(17071829-17071940)
chr2 (589-660)||(21616742-21616813)
chr2 (842-897)||(39167441-39167496)
chr2 (769-897)||(2325448-2325573)
chr2 (769-857)||(18494386-18494471)
chr2 (769-885)||(29242228-29242341)
chr2 (768-885)||(33902067-33902179)
chr2 (832-897)||(41463928-41463993)
chr2 (766-819)||(41465506-41465559)
chr2 (771-882)||(44285951-44286059)
chr2 (821-897)||(4478418-4478494)
chr2 (821-885)||(33709322-33709386)
chr2 (821-885)||(43648335-43648399)
chr2 (589-660)||(23718006-23718077)
chr2 (589-660)||(24105678-24105749)
chr2 (769-881)||(17054190-17054299)
chr2 (589-639)||(20539703-20539753)
chr2 (614-663)||(22556965-22557015)
chr2 (769-885)||(31570824-31570937)
chr2 (614-660)||(34691813-34691859)
chr2 (614-660)||(34714225-34714271)
chr2 (769-819)||(41960883-41960933)
[»] chr3 (45 HSPs)
chr3 (767-897)||(37203056-37203183)
chr3 (768-897)||(4015450-4015576)
chr3 (767-885)||(37157697-37157811)
chr3 (769-882)||(35844317-35844427)
chr3 (769-897)||(3655262-3655387)
chr3 (769-893)||(39282644-39282764)
chr3 (771-885)||(46297834-46297945)
chr3 (767-897)||(51213041-51213168)
chr3 (781-885)||(29099358-29099459)
chr3 (821-897)||(42506135-42506211)
chr3 (769-882)||(11466815-11466925)
chr3 (772-884)||(22446138-22446247)
chr3 (769-885)||(21193597-21193710)
chr3 (769-885)||(26941332-26941445)
chr3 (769-885)||(40552331-40552444)
chr3 (769-897)||(48354932-48355057)
chr3 (821-897)||(47481562-47481638)
chr3 (822-897)||(20373356-20373431)
chr3 (782-903)||(40935995-40936113)
chr3 (764-885)||(7327554-7327673)
chr3 (769-885)||(22450959-22451072)
chr3 (769-885)||(34132926-34133039)
chr3 (759-817)||(53811976-53812034)
chr3 (771-885)||(53229224-53229336)
chr3 (784-885)||(11357436-11357535)
chr3 (821-893)||(21009866-21009938)
chr3 (821-885)||(44186573-44186637)
chr3 (833-884)||(2007985-2008036)
chr3 (589-660)||(8383237-8383308)
chr3 (596-671)||(23184069-23184144)
chr3 (769-885)||(52040994-52041108)
chr3 (769-819)||(55343419-55343469)
chr3 (832-897)||(4761709-4761774)
chr3 (595-658)||(1438790-1438853)
chr3 (842-885)||(43348319-43348362)
chr3 (614-660)||(8039843-8039889)
chr3 (615-657)||(9624647-9624689)
chr3 (589-671)||(25948884-25948966)
chr3 (772-883)||(32373466-32373572)
chr3 (768-860)||(44891497-44891585)
chr3 (589-646)||(5441053-5441110)
chr3 (616-673)||(17005614-17005671)
chr3 (587-644)||(23870583-23870640)
chr3 (587-656)||(29112292-29112361)
chr3 (615-660)||(45451559-45451604)
[»] chr1 (52 HSPs)
chr1 (769-895)||(2959744-2959867)
chr1 (768-884)||(38823209-38823322)
chr1 (769-897)||(1547283-1547408)
chr1 (769-897)||(16415641-16415767)
chr1 (788-884)||(9903122-9903215)
chr1 (769-885)||(34012444-34012557)
chr1 (768-884)||(42721034-42721147)
chr1 (769-885)||(48620633-48620746)
chr1 (769-885)||(11742417-11742530)
chr1 (769-885)||(18422647-18422760)
chr1 (771-897)||(15752027-15752150)
chr1 (768-884)||(3309143-3309255)
chr1 (769-897)||(10182063-10182188)
chr1 (781-897)||(28564836-28564949)
chr1 (769-913)||(32267030-32267171)
chr1 (769-898)||(37618948-37619076)
chr1 (770-885)||(14758038-14758150)
chr1 (591-671)||(6427332-6427412)
chr1 (833-885)||(21289729-21289781)
chr1 (769-882)||(39393379-39393489)
chr1 (769-885)||(15382929-15383042)
chr1 (769-897)||(19899824-19899949)
chr1 (781-885)||(37451294-37451395)
chr1 (589-662)||(16927191-16927264)
chr1 (832-897)||(47279245-47279310)
chr1 (769-897)||(8222127-8222249)
chr1 (771-885)||(41926161-41926272)
chr1 (589-660)||(38503300-38503371)
chr1 (586-660)||(6415009-6415083)
chr1 (782-885)||(4330288-4330390)
chr1 (770-897)||(10922724-10922848)
chr1 (848-897)||(23999419-23999468)
chr1 (840-885)||(27563972-27564017)
chr1 (832-885)||(40884869-40884922)
chr1 (821-885)||(3534977-3535041)
chr1 (833-885)||(27267266-27267318)
chr1 (763-885)||(30327019-30327138)
chr1 (767-885)||(31621620-31621735)
chr1 (821-885)||(32216100-32216164)
chr1 (589-660)||(398773-398844)
chr1 (850-897)||(27227540-27227587)
chr1 (557-660)||(36878410-36878512)
chr1 (586-653)||(38078676-38078743)
chr1 (589-660)||(52903229-52903300)
chr1 (615-653)||(1262890-1262928)
chr1 (590-644)||(2896145-2896199)
chr1 (590-660)||(19562629-19562699)
chr1 (769-819)||(22170750-22170800)
chr1 (769-819)||(30254854-30254904)
chr1 (616-662)||(35999328-35999374)
chr1 (848-885)||(7079130-7079167)
chr1 (857-886)||(38759610-38759639)
[»] chr8 (36 HSPs)
chr8 (769-882)||(16446956-16447066)
chr8 (769-897)||(27082904-27083029)
chr8 (769-885)||(34894966-34895079)
chr8 (769-885)||(34952109-34952222)
chr8 (769-885)||(36695044-36695157)
chr8 (758-897)||(37970585-37970721)
chr8 (768-885)||(6098596-6098710)
chr8 (769-897)||(1204926-1205051)
chr8 (765-897)||(10555268-10555397)
chr8 (766-897)||(12876105-12876233)
chr8 (767-885)||(13307620-13307735)
chr8 (768-897)||(23854497-23854623)
chr8 (771-885)||(465843-465954)
chr8 (769-885)||(1150183-1150296)
chr8 (769-885)||(38643977-38644090)
chr8 (766-885)||(5300024-5300140)
chr8 (769-885)||(40862418-40862532)
chr8 (769-897)||(41362517-41362639)
chr8 (769-885)||(9864147-9864260)
chr8 (769-897)||(16222862-16222987)
chr8 (615-660)||(12606837-12606882)
chr8 (769-884)||(43643674-43643786)
chr8 (592-660)||(34897068-34897136)
chr8 (769-886)||(8803887-8803997)
chr8 (601-663)||(9936806-9936868)
chr8 (769-897)||(30654649-30654774)
chr8 (615-660)||(31236585-31236630)
chr8 (589-662)||(36934650-36934723)
chr8 (833-897)||(1149698-1149762)
chr8 (617-673)||(11803267-11803323)
chr8 (589-653)||(22651956-22652020)
chr8 (617-660)||(8798839-8798882)
chr8 (767-817)||(33197889-33197939)
chr8 (766-819)||(15009238-15009291)
chr8 (595-660)||(20679403-20679468)
chr8 (589-658)||(29776016-29776085)
[»] chr5 (49 HSPs)
chr5 (769-897)||(38528287-38528411)
chr5 (767-884)||(7693228-7693342)
chr5 (770-885)||(32563150-32563262)
chr5 (771-885)||(699152-699263)
chr5 (771-885)||(5837557-5837668)
chr5 (769-867)||(13956425-13956520)
chr5 (769-882)||(9200233-9200343)
chr5 (768-885)||(35511539-35511653)
chr5 (769-885)||(19119859-19119972)
chr5 (769-897)||(39572819-39572944)
chr5 (768-885)||(23116284-23116398)
chr5 (769-885)||(5112375-5112488)
chr5 (769-885)||(36860423-36860536)
chr5 (771-882)||(26268076-26268184)
chr5 (771-897)||(27318537-27318660)
chr5 (767-885)||(36866760-36866875)
chr5 (769-885)||(8741948-8742062)
chr5 (769-897)||(12910350-12910480)
chr5 (822-897)||(24886154-24886229)
chr5 (769-885)||(1429207-1429320)
chr5 (769-897)||(30969374-30969499)
chr5 (769-897)||(35826533-35826658)
chr5 (769-893)||(22255181-22255303)
chr5 (771-882)||(25500991-25501099)
chr5 (821-897)||(33908282-33908358)
chr5 (768-897)||(14409377-14409502)
chr5 (768-885)||(40133384-40133498)
chr5 (767-882)||(22019630-22019742)
chr5 (770-881)||(31705677-31705785)
chr5 (768-878)||(15724489-15724596)
chr5 (763-897)||(31786696-31786827)
chr5 (838-885)||(8437032-8437079)
chr5 (589-671)||(15410445-15410527)
chr5 (851-885)||(15992602-15992636)
chr5 (769-893)||(22974136-22974257)
chr5 (832-881)||(6824547-6824596)
chr5 (615-660)||(23012416-23012461)
chr5 (832-885)||(25668709-25668762)
chr5 (849-885)||(21088828-21088864)
chr5 (616-656)||(22423824-22423864)
chr5 (769-817)||(22616494-22616542)
chr5 (769-885)||(27330306-27330417)
chr5 (617-660)||(32630743-32630786)
chr5 (593-655)||(30098310-30098372)
chr5 (617-671)||(38749560-38749614)
chr5 (615-660)||(6471897-6471942)
chr5 (771-804)||(7209004-7209037)
chr5 (832-897)||(14919578-14919643)
chr5 (822-879)||(42342783-42342840)
[»] scaffold0291 (1 HSPs)
scaffold0291 (771-897)||(7889-8012)
[»] chr7 (48 HSPs)
chr7 (769-897)||(7334769-7334894)
chr7 (767-882)||(12165725-12165837)
chr7 (768-885)||(5657554-5657668)
chr7 (769-897)||(30055501-30055627)
chr7 (767-885)||(37109845-37109960)
chr7 (764-885)||(4582889-4583007)
chr7 (769-885)||(21991611-21991724)
chr7 (765-897)||(37346993-37347122)
chr7 (771-897)||(11071182-11071306)
chr7 (768-897)||(27283718-27283844)
chr7 (769-885)||(17842659-17842772)
chr7 (769-885)||(32821126-32821239)
chr7 (769-897)||(41765139-41765264)
chr7 (770-897)||(24211717-24211841)
chr7 (770-897)||(38258521-38258645)
chr7 (833-893)||(9355891-9355951)
chr7 (765-882)||(6546490-6546604)
chr7 (769-882)||(12390706-12390816)
chr7 (768-897)||(34362210-34362335)
chr7 (769-885)||(31520796-31520909)
chr7 (770-885)||(48928636-48928748)
chr7 (768-882)||(8861259-8861370)
chr7 (769-897)||(18797304-18797427)
chr7 (783-885)||(22687228-22687327)
chr7 (771-885)||(27421452-27421563)
chr7 (764-885)||(32432427-32432540)
chr7 (769-897)||(26524388-26524513)
chr7 (764-883)||(44413454-44413571)
chr7 (832-897)||(29173575-29173640)
chr7 (617-674)||(35297666-35297723)
chr7 (768-885)||(10359287-10359401)
chr7 (589-660)||(19206030-19206101)
chr7 (771-884)||(23111167-23111277)
chr7 (589-660)||(26733284-26733355)
chr7 (833-895)||(38053522-38053584)
chr7 (769-885)||(43686016-43686128)
chr7 (785-885)||(48928369-48928466)
chr7 (615-660)||(24146822-24146867)
chr7 (832-885)||(26980358-26980411)
chr7 (591-655)||(1401007-1401071)
chr7 (617-660)||(3520350-3520393)
chr7 (589-660)||(3721074-3721144)
chr7 (765-819)||(8299186-8299240)
chr7 (771-817)||(19786282-19786328)
chr7 (594-660)||(32308105-32308171)
chr7 (587-660)||(9482912-9482985)
chr7 (770-885)||(33688335-33688446)
chr7 (595-660)||(42720898-42720963)
[»] chr6 (32 HSPs)
chr6 (769-885)||(8513233-8513346)
chr6 (769-897)||(1945833-1945959)
chr6 (769-897)||(4318882-4319007)
chr6 (768-897)||(7235094-7235219)
chr6 (769-897)||(5627391-5627516)
chr6 (769-897)||(18498433-18498559)
chr6 (589-671)||(15443675-15443757)
chr6 (769-884)||(3880011-3880123)
chr6 (832-897)||(15491675-15491740)
chr6 (771-885)||(6088910-6089021)
chr6 (771-885)||(29182165-29182276)
chr6 (589-660)||(13851716-13851787)
chr6 (768-897)||(33618833-33618959)
chr6 (629-671)||(11424708-11424750)
chr6 (586-660)||(20371118-20371192)
chr6 (614-660)||(30866152-30866198)
chr6 (589-673)||(10294087-10294171)
chr6 (593-660)||(7265601-7265668)
chr6 (615-658)||(7723260-7723303)
chr6 (589-660)||(9027158-9027229)
chr6 (617-660)||(9617442-9617485)
chr6 (589-660)||(9629363-9629434)
chr6 (589-656)||(9658859-9658926)
chr6 (769-897)||(7055274-7055399)
chr6 (614-660)||(7377984-7378030)
chr6 (615-657)||(7996389-7996431)
chr6 (615-657)||(8022370-8022412)
chr6 (614-660)||(19040357-19040403)
chr6 (615-693)||(24138432-24138510)
chr6 (606-647)||(2545438-2545479)
chr6 (615-660)||(9025502-9025547)
chr6 (619-660)||(17411876-17411917)
[»] chr4 (42 HSPs)
chr4 (769-897)||(19089539-19089664)
chr4 (769-897)||(25701143-25701268)
chr4 (768-885)||(39397917-39398031)
chr4 (768-885)||(55241202-55241316)
chr4 (769-885)||(30002722-30002835)
chr4 (766-885)||(7703514-7703630)
chr4 (771-885)||(36493786-36493897)
chr4 (769-897)||(37663827-37663950)
chr4 (771-897)||(47253751-47253873)
chr4 (768-885)||(49375965-49376080)
chr4 (771-884)||(17167715-17167825)
chr4 (771-884)||(17173292-17173402)
chr4 (768-885)||(28003084-28003198)
chr4 (769-882)||(35021136-35021246)
chr4 (770-883)||(37775670-37775780)
chr4 (770-885)||(4597994-4598105)
chr4 (771-885)||(34948195-34948306)
chr4 (769-886)||(34361588-34361702)
chr4 (769-877)||(4205116-4205221)
chr4 (769-885)||(35025686-35025799)
chr4 (769-884)||(37287733-37287846)
chr4 (769-885)||(38011854-38011967)
chr4 (783-885)||(46888255-46888354)
chr4 (769-893)||(32912670-32912791)
chr4 (769-884)||(25184113-25184225)
chr4 (832-897)||(50764790-50764855)
chr4 (821-885)||(23761121-23761185)
chr4 (769-885)||(29584298-29584409)
chr4 (771-885)||(33341397-33341512)
chr4 (589-660)||(44081585-44081656)
chr4 (614-660)||(3712517-3712563)
chr4 (782-885)||(32592106-32592206)
chr4 (795-885)||(54499336-54499424)
chr4 (769-897)||(55477977-55478106)
chr4 (840-884)||(9139313-9139357)
chr4 (770-818)||(51204580-51204628)
chr4 (589-660)||(26504307-26504378)
chr4 (615-658)||(35952627-35952670)
chr4 (595-660)||(35723392-35723458)
chr4 (821-882)||(879649-879710)
chr4 (589-646)||(20521871-20521928)
chr4 (616-661)||(36635331-36635376)
[»] scaffold0002 (2 HSPs)
scaffold0002 (793-882)||(94458-94544)
scaffold0002 (764-897)||(129-259)
[»] scaffold0022 (1 HSPs)
scaffold0022 (764-897)||(146076-146206)


Alignment Details
Target: chr2 (Bit Score: 702; Significance: 0; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 702; E-Value: 0
Query Start/End: Original strand, 30 - 901
Target Start/End: Original strand, 4762885 - 4763760
Alignment:
Q  30 catgttggagtccactataagtttttatccatctttgaattgaatg---tgaggcttaccctatggcaattacgacgttttcgttttttattttggcttt 126  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4762885 catgttggagtccactataagtttttatccatctttgaattgaatgcactgaggcttaccctatggcaattacgacgttttcgttttttattttggcttt 4762984  T
Q  127 gagtttgcaaatatgatgtgtgccacaaccagaacttgcttattattaccaacatttgtttctaccacatacatacagtaatgttaatttacttgcaatc 226  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4762985 gagtttgcaaatatgatgtgtgccactaccagaacttgcttattattaccaacatttgtttctaccacatacatacagtaatgttaatttacttgcaatc 4763084  T
Q  227 catatttaaaatttaaaaattccagatgatgagaacttgtgtgcatagatgtgttttttaagagtnnnnnnnnnnnnnnnnnnnntgtgtatattattta 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||    
T  4763085 catatttaaaatttaaaaattccagatgatgagaacttgtgtgcatagatgtgttttttaagagtaaaaattaaaaagcaaaaaatgtgtatattattta 4763184  T
Q  327 aaattgtgtacgttttgtgaagttcaataagattccaacatctgagagtacgtgtacagttgttgcattgcatggatgcacatggagaggaatatactgc 426  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4763185 aaattgtgtacgttttgtgaagttcaataagattccaacatctgagagtacgtgtacagttgttgcattgcatggatgcacatggagaggaatatactgc 4763284  T
Q  427 agtcgctgagatgcatatttttctcaacgaagcataatattttcgacgattgtaatcttccctcgaaaatacacacactaattgagagaaaatacttgtt 526  Q
    |||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  4763285 agtcactgaggtgcatatttttctcaacgaagcataacattttcgacgattgtaatctttcctcgaaaatacacacactaattgagagaaaatacttgtt 4763384  T
Q  527 taattagtgtgatagtataaattttattcgttgcatgctatgaagcatggattcgtacgccggacacggacactgacacgtcgttatcgctaataatttg 626  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||    
T  4763385 taattagcgtgatagtataaattttattcgttgcatgctatgaagcatggattcgaacatcggacacggacactgacacgtcgttatcgctaataatttg 4763484  T
Q  627 -agaaaatcatatagttcaatataattatatgtgttgttgttgtgttgaacatgacatatgtctgacatcgagacacgactaattcaaaaaatacacgtg 725  Q
     | ||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||    
T  4763485 aaaaaaatcatatagttcaatataattatatgtgttgttgttgtgttgaacatgacacgtgtctgacatcgagacacgactaattcaaaaaatacaagtg 4763584  T
Q  726 cttcatgggttgcatgcaataacaagtgagacattttatttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcacta 825  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||| |||||    
T  4763585 tttcatgggttgcatgcaataacaagtgagacattttatttttggaaaattctatgatgaagtcatgaaaatgacttttctgatgaagttaacaacacta 4763684  T
Q  826 tatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtataatc 901  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  4763685 tatcaacaaaactgtagtgagtaacaccccactgtttgtacagtgacatcaaaagttcagttcccatagtataatc 4763760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 767 - 894
Target Start/End: Original strand, 26357575 - 26357699
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    |||||||||| || ||||||||||| ||||||||||||||||| |||||||||   ||||| || ||||| ||||||||| |||| ||||||||||||||    
T  26357575 ttggaaaattttatggtgaagtcatgaaaatgacttttctgatgaagttaaca---ctataacatcaaaactgtagtgagtaacatcccactgtttgtac 26357671  T
Q  867 agtgacatcaaaagttcagctctcatag 894  Q
    ||||||||||||||||||| ||| ||||    
T  26357672 agtgacatcaaaagttcagttcttatag 26357699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 4264280 - 4264167
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||||| ||||||||||||| | |||||||||   ||||| || ||||| ||| ||||| |||| ||||||||||||||||    
T  4264280 ggaaaattctatggtgaagtcatcataatgacttttctggtaaagttaaca---ctatagcatcaaaagtgttgtgagtaacatcccactgtttgtacag 4264184  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  4264183 tgacatcaaaagttcag 4264167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 768 - 883
Target Start/End: Complemental strand, 33551190 - 33551078
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||||||||||||||| | |||||||||| |  | |||||||||   ||||| || ||||| ||||||||| ||||||||||||||||||||    
T  33551190 tggaaaattctacggtgaagtcatgagaatgacttttttagtgaagttaaca---ctataacatcaaaaatgtagtgagtaacaccccactgtttgtaca 33551094  T
Q  868 gtgacatcaaaagttc 883  Q
     |||||||||||||||    
T  33551093 atgacatcaaaagttc 33551078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 771 - 885
Target Start/End: Complemental strand, 33660569 - 33660458
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| ||||||||||| ||||||||||||||  |||||||||||   ||||| || ||||| ||| ||||| ||||||| |||||||||||||||    
T  33660569 aaaattctatggtgaagtcattaaaatgacttttctagttaagttaaca---ctataacatcaaaagtgttgtgagtaacacccaactgtttgtacagtg 33660473  T
Q  871 acatcaaaagttcag 885  Q
     ||||||||||||||    
T  33660472 gcatcaaaagttcag 33660458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 770 - 882
Target Start/End: Original strand, 13711465 - 13711574
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    |||||||||| ||||||||||||| ||||||||||||| | |||||||||    |||| || ||||| ||| ||||| |||||||||| |||||||||||    
T  13711465 gaaaattctatggtgaagtcatcagaatgacttttctggtgaagttaacat---tatagcatcaaaagtgttgtgagtaacaccccacagtttgtacagt 13711561  T
Q  870 gacatcaaaagtt 882  Q
    |||||||||||||    
T  13711562 gacatcaaaagtt 13711574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 771 - 897
Target Start/End: Original strand, 36641988 - 36642111
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| ||||||||||| | ||||||||||||| | || ||||    |||||| || ||||| ||| | ||| |||||| ||||||||||||||||    
T  36641988 aaaattctatggtgaagtcatgagaatgacttttctggtgaaattaa---tactatagcatcaaaagtgttgcgagtaacacctcactgtttgtacagtg 36642084  T
Q  871 acatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||  ||||||||||    
T  36642085 acatcaaaagttcagtcctcatagtat 36642111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 768 - 886
Target Start/End: Original strand, 35958908 - 35959023
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| | ||||||||| |||||||||||| || | |||||  ||   ||||| ||  |||| |||| |||||||||||||||||||||||||    
T  35958908 tggaaaattctatgatgaagtcataaaaatgacttttttggtgaagttgcca---ctataacataaaaaatgtaatgagcaacaccccactgtttgtaca 35959004  T
Q  868 gtgacatcaaaagttcagc 886  Q
     |||||| |||||||||||    
T  35959005 atgacattaaaagttcagc 35959023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 768 - 885
Target Start/End: Original strand, 19313851 - 19313965
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| | ||||||||||||| | |||||||   || |||| || ||||| ||| ||||| ||||||  ||| ||| ||||    
T  19313851 tggaaaattctatggtgaagtcattagaatgacttttctggtgaagttaa---cattatagcatcaaaagtgttgtgagtaacaccttactatttataca 19313947  T
Q  868 gtgacatcaaaagttcag 885  Q
    ||||||||||||||||||    
T  19313948 gtgacatcaaaagttcag 19313965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 4166922 - 4167035
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||  ||||||||||||||| | |||||||||  |   |||||| || |||||   ||| ||||||||||||||||||||     
T  4166922 ggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaacattatagtatcaaaaatattgt---gagtaacaccccactgtttgtacaa 4167018  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  4167019 tggcatcaaaagttcag 4167035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 771 - 897
Target Start/End: Original strand, 3176941 - 3177064
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| |||||||| |  ||||||||||||||||| ||||||| |   |||||  | ||||| |||  |||| ||||| | |||||||||||| ||    
T  3176941 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaata---ctataatatcaaaaatgttttgagtaacacgcaactgtttgtacaatg 3177037  T
Q  871 acatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||  ||||||||||    
T  3177038 acatcaaaagttcagtcctcatagtat 3177064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 830 - 882
Target Start/End: Original strand, 5881597 - 5881649
Alignment:
Q  830 aacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagtt 882  Q
    ||||||| ||| ||||| |||||||||||||||||||||||||||||||||||    
T  5881597 aacaaaagtgttgtgagtaacaccccactgtttgtacagtgacatcaaaagtt 5881649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 821 - 885
Target Start/End: Complemental strand, 27350092 - 27350028
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||||| || ||||| ||| ||||| |||||| |||||||||||||||||||||||||||||||    
T  27350092 cactatagcatcaaaaatgttgtgagtaacaccacactgtttgtacagtgacatcaaaagttcag 27350028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 767 - 897
Target Start/End: Original strand, 37905707 - 37905833
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||||||||| |||||||| || ||||||| |||| || | |||||||||   ||||| ||  |||| ||||  ||| |||||||||| ||||||||    
T  37905707 ttggaaaattctatggtgaagttataaaaatgattttt-tggtgaagttaaca---ctataacataaaaaatgtaacgagtaacaccccaccgtttgtac 37905802  T
Q  867 agtgacatcaaaagttcagctctcatagtat 897  Q
    | |||||||||||||||||  ||||||||||    
T  37905803 aatgacatcaaaagttcagtcctcatagtat 37905833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 771 - 885
Target Start/End: Complemental strand, 43771039 - 43770929
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| ||||||||||| | ||||| |||| || | |||||||||   ||||| || ||||| ||| ||||| ||||||||||||||| |||||||    
T  43771039 aaaattctatggtgaagtcattagaatgattttt-tggtgaagttaaca---ctataacatcaaaagtgttgtgagtaacaccccactgtttatacagtg 43770944  T
Q  871 acatcaaaagttcag 885  Q
     ||||||||||||||    
T  43770943 gcatcaaaagttcag 43770929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 11366584 - 11366459
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||| |||| | |||||||||| || | || ||||||   ||||| || ||||| |||| |||| |||| | |||| |||||| |     
T  11366584 ggaaaattctatggtgaaatcataagaatgacttttttggtgaaattaaca---ctataacatcaaaaatgtaatgagtaacatctcactatttgtataa 11366488  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||| ||||||||||    
T  11366487 tgacatcaaaagttcagccctcatagtat 11366459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 19289521 - 19289401
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||     ||||||||| |||| |||||||||   ||||| || ||||| | || |||| ||||||||| ||||||||||     
T  19289521 ggaaaattctatggtgaagtca-----atgacttttttgatgaagttaaca---ctataacatcaaaaatataatgagtaacaccccattgtttgtacaa 19289430  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||| || ||||| |||||    
T  19289429 tgacatcaaaagttaagttctcacagtat 19289401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 19424831 - 19424706
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| || ||||||||||| | |||| |||||||| | |||||||||   ||||| || ||||| ||| ||||| ||||||||| ||||| || ||    
T  19424831 ggaaaattttatggtgaagtcatgagaatggcttttctggtgaagttaaca---ctataacatcaaaagtgttgtgagtaacaccccattgtttatatag 19424735  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    || ||||||||||| ||  ||||||||||    
T  19424734 tggcatcaaaagtttagtcctcatagtat 19424706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 769 - 883
Target Start/End: Complemental strand, 17071940 - 17071829
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||||||||   |||||||||| || | |||||||||   ||||| |||||||| |||||| || |||| | || | ||||||||     
T  17071940 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaaca---ctataacaacaaaaatgtagtaagtaacatctcattatttgtacaa 17071844  T
Q  869 tgacatcaaaagttc 883  Q
    |||||||||||||||    
T  17071843 tgacatcaaaagttc 17071829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 21616742 - 21616813
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||| |||||| ||  | |||||||||||||||||||||| ||| |||| | |||||||||||||    
T  21616742 gacacggacacggacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 842 - 897
Target Start/End: Complemental strand, 39167496 - 39167441
Alignment:
Q  842 gtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||| |||||| ||||||||||||| |||||||||||||||||  ||||||||||    
T  39167496 gtgagtaacacctcactgtttgtacaatgacatcaaaagttcagtcctcatagtat 39167441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 2325573 - 2325448
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||||| ||   ||||||||||||  | |||||||||    |||| || || || |||| |||| ||||||||| ||||||||||     
T  2325573 ggaaaattctatggtgaagttatgtgaatgacttttctcgtgaagttaacaa---tataacatcataaatgtattgagtaacaccccattgtttgtacac 2325477  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    || ||||||||||||||  ||||||||||    
T  2325476 tggcatcaaaagttcagtcctcatagtat 2325448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 857
Target Start/End: Complemental strand, 18494471 - 18494386
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccac 857  Q
    ||||||||||  ||||||||||| ||||||||||||||| | |||||||   ||||||| || ||||| ||| ||||| ||||||||||    
T  18494471 ggaaaattctgtggtgaagtcatgaaaatgacttttctggtgaagttaa---cactatagcatcaaaagtgttgtgagtaacaccccac 18494386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 29242341 - 29242228
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| ||||||  |||| || | ||||||| |   ||||| ||  |||| | ||||| | |||||||||||||||||||||    
T  29242341 ggaaaattctatggtgaagtcatgaaaatggtttttttggtgaagttaaaa---ctataacataaaaaatatagtgcgtaacaccccactgtttgtacag 29242245  T
Q  869 tgacatcaaaagttcag 885  Q
    ||  |||||||||||||    
T  29242244 tggtatcaaaagttcag 29242228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 768 - 885
Target Start/End: Original strand, 33902067 - 33902179
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| | ||||||| | | ||||||||||||| | |||||||||  |  |||     |||| ||||||||| || ||||||||||||||| |    
T  33902067 tggaaaattctatgatgaagtcgttagaatgacttttctggtgaagttaacactaacata-----aaaaatgtagtgagtaataccccactgtttgtaaa 33902161  T
Q  868 gtgacatcaaaagttcag 885  Q
     |||||||||||||||||    
T  33902162 atgacatcaaaagttcag 33902179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 832 - 897
Target Start/End: Complemental strand, 41463993 - 41463928
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||| ||| ||||| |||||| |||||||||||||||| |||||||||||||   ||||||||||    
T  41463993 caaaagtgttgtgagtaacacctcactgtttgtacagtggcatcaaaagttcaatcctcatagtat 41463928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 766 - 819
Target Start/End: Original strand, 41465506 - 41465559
Alignment:
Q  766 tttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaaca 819  Q
    |||||||||||||| ||||||||||| | ||||||||||||| | |||||||||    
T  41465506 tttggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaaca 41465559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 771 - 882
Target Start/End: Original strand, 44285951 - 44286059
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    |||||| ||||||||||||||   ||||| ||||||||| |||||||   ||||||| || ||||| ||| | |||||| | | ||||||||||| ||||    
T  44285951 aaaattatacggtgaagtcatgcgaatgatttttctgatgaagttaa---cactatagcatcaaaagtgttgcgagcaatatctcactgtttgtatagtg 44286047  T
Q  871 acatcaaaagtt 882  Q
     |||||||||||    
T  44286048 gcatcaaaagtt 44286059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 821 - 897
Target Start/End: Original strand, 4478418 - 4478494
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||||| || ||||| ||| ||||| ||||| ||| ||||||||||||| ||||||||||| ||  ||||||||||    
T  4478418 cactataacatcaaaagtgttgtgagtaacactccattgtttgtacagtggcatcaaaagtttagtcctcatagtat 4478494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 821 - 885
Target Start/End: Complemental strand, 33709386 - 33709322
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||||| || ||||| ||| | ||| ||||| |||||||| |||||||||||||||||||||||    
T  33709386 cactataacatcaaaagtgttgcgagtaacactccactgttagtacagtgacatcaaaagttcag 33709322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 821 - 885
Target Start/End: Complemental strand, 43648399 - 43648335
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||||| || ||||| |||| |||| |||||| ||||||||||| | |||||||||||||||||    
T  43648399 cactataacatcaaaaatgtaatgagtaacacctcactgtttgtataatgacatcaaaagttcag 43648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 23718006 - 23718077
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||||||  ||  | |||||||||||||||||| ||| ||| |||| | |||||||||||||    
T  23718006 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgt 23718077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 24105678 - 24105749
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||||||  ||  | |||||||||||||||||| ||| ||| |||| | |||||||||||||    
T  24105678 gacacggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgt 24105749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 769 - 881
Target Start/End: Complemental strand, 17054299 - 17054190
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||||||||   |||||||||| || | ||||||| |   ||||| || ||||| |||||| || |||| | || ||||||||||     
T  17054299 ggaaaattctatggtgaagtcatgcgaatgacttttttggtgaagttaata---ctataacatcaaaaatgtagtaagtaacatctcattgtttgtacaa 17054203  T
Q  869 tgacatcaaaagt 881  Q
    |||||||||||||    
T  17054202 tgacatcaaaagt 17054190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 589 - 639
Target Start/End: Complemental strand, 20539753 - 20539703
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatata 639  Q
    |||||||||||||||||||||  |  ||||||||||||| |||||||||||    
T  20539753 gacacggacactgacacgtcgacacagctaataatttgaaaaaatcatata 20539703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 663
Target Start/End: Original strand, 22556965 - 22557015
Alignment:
Q  614 cgctaataatttgagaa-aatcatatagttcaatataattatatgtgttgt 663  Q
    |||||||||||||| || ||||||||| |||||| ||||||||||||||||    
T  22556965 cgctaataatttgaaaataatcatataattcaatgtaattatatgtgttgt 22557015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 31570937 - 31570824
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||||| || | ||| ||||||||| | || ||||||   ||||| ||  |||| ||| || || ||||||||||| ||| || ||    
T  31570937 ggaaaattctatggtgaagttatgagaataacttttctggtgaaattaaca---ctataacattaaaagtgttgtaagtaacaccccactatttttatag 31570841  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  31570840 tgacatcaaaagttcag 31570824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 660
Target Start/End: Complemental strand, 34691859 - 34691813
Alignment:
Q  614 cgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||| ||||||||||| |||| | |||||||||||||    
T  34691859 cgctaataatttgataaaatcatataattcagtgtaattatatgtgt 34691813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 660
Target Start/End: Complemental strand, 34714271 - 34714225
Alignment:
Q  614 cgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||| ||||||||||| |||| | |||||||||||||    
T  34714271 cgctaataatttgataaaatcatataattcagtgtaattatatgtgt 34714225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 769 - 819
Target Start/End: Original strand, 41960883 - 41960933
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaaca 819  Q
    ||||||||||| |||||||||||  ||||||||||| |||| |||||||||    
T  41960883 ggaaaattctatggtgaagtcatagaaatgacttttttgatgaagttaaca 41960933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 8e-33; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 767 - 897
Target Start/End: Original strand, 37203056 - 37203183
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||||||||| ||||||||||| ||||||| |||| |||| |||||||||   ||||| || ||||||||||||||| |||||||||||||||||||    
T  37203056 ttggaaaattctatggtgaagtcataaaaatgatttttttgatgaagttaaca---ctataacatcaaaattgtagtgagtaacaccccactgtttgtac 37203152  T
Q  867 agtgacatcaaaagttcagctctcatagtat 897  Q
    |||| ||||||||||||||  ||||||||||    
T  37203153 agtggcatcaaaagttcagtcctcatagtat 37203183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 768 - 897
Target Start/End: Original strand, 4015450 - 4015576
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| | ||||||||||||||| |||||||||   ||||| || ||||| ||| ||||| ||||||| |||||||||| |    
T  4015450 tggaaaattctatggtgaagtcatgagaatgacttttctgatgaagttaaca---ctatagcatcaaaagtgttgtgagtaacacccaactgtttgtaga 4015546  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
    ||||||||||||||||||  ||||||||||    
T  4015547 gtgacatcaaaagttcagtcctcatagtat 4015576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 767 - 885
Target Start/End: Original strand, 37157697 - 37157811
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||||||||| ||||||||||| |||||| ||||| |||| |||||||   ||||||| || ||||||||||||||| |||||||||||| ||||||    
T  37157697 ttggaaaattctatggtgaagtcatgaaaatggcttttttgatgaagttaa---cactataacatcaaaattgtagtgagtaacaccccactg-ttgtac 37157792  T
Q  867 agtgacatcaaaagttcag 885  Q
    |||| ||||||||||||||    
T  37157793 agtggcatcaaaagttcag 37157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 769 - 882
Target Start/End: Original strand, 35844317 - 35844427
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||||||||||| | |||||||||   ||||| |||||||| ||| ||||| |||||| ||||||||||||||    
T  35844317 ggaaaattctatggtgaagtcatgataatgacttttctggtgaagttaaca---ctataacaacaaaaatgttgtgagtaacacctcactgtttgtacag 35844413  T
Q  869 tgacatcaaaagtt 882  Q
    ||||||||||||||    
T  35844414 tgacatcaaaagtt 35844427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 3655387 - 3655262
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| || ||||||||||| |||||||||||| |||| |||||||||   ||||| ||  |||| |||| |||| |||||||||| |||||||||     
T  3655387 ggaaaattttatggtgaagtcataaaaatgacttttttgataaagttaaca---ctataacataaaaaatgtaatgagtaacaccccaccgtttgtacaa 3655291  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||  ||||||||||    
T  3655290 tgacatcaaaagttcagtcctcatagtat 3655262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 769 - 893
Target Start/End: Original strand, 39282644 - 39282764
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| ||||||| ||||||||| || ||||||   ||||| || ||||| ||| ||||| || |||||||||||| |||||    
T  39282644 ggaaaattctatggtgaagtcatgaaaatgatttttctgataaaattaaca---ctataacatcaaaactgt-gtgagtaataccccactgtttatacag 39282739  T
Q  869 tgacatcaaaagttcagctctcata 893  Q
    || |||||||||||||| |||||||    
T  39282740 tggcatcaaaagttcagttctcata 39282764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 771 - 885
Target Start/End: Complemental strand, 46297945 - 46297834
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| ||||||||||| ||||||||||||||| | |||||||   ||||||| || ||||| | ||||||| ||||| |||||||||||||| ||    
T  46297945 aaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaa---cactataacatcaaaaatatagtgagtaacacaccactgtttgtacaatg 46297849  T
Q  871 acatcaaaagttcag 885  Q
     | ||||||||||||    
T  46297848 gcgtcaaaagttcag 46297834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 767 - 897
Target Start/End: Complemental strand, 51213168 - 51213041
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||||||||| ||||||||||| | |||||||||| || | |||||||||   || || ||  |||| |||| ||||||||||||||||||||||||    
T  51213168 ttggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaaca---ctgtaacataaaaaatgtaatgagcaacaccccactgtttgtac 51213072  T
Q  867 agtgacatcaaaagttcagctctcatagtat 897  Q
    | || ||||||||||| ||  ||||||||||    
T  51213071 aatggcatcaaaagttgagtcctcatagtat 51213041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 781 - 885
Target Start/End: Original strand, 29099358 - 29099459
Alignment:
Q  781 ggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaag 880  Q
    ||||||||||| | ||||||||||||| | |||||||||   ||||| ||  |||| ||| ||||| |||||||||||||||||||||||||||| ||||    
T  29099358 ggtgaagtcattagaatgacttttctggtgaagttaaca---ctataacataaaaaatgtcgtgagtaacaccccactgtttgtacagtgacatctaaag 29099454  T
Q  881 ttcag 885  Q
    |||||    
T  29099455 ttcag 29099459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 821 - 897
Target Start/End: Complemental strand, 42506211 - 42506135
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||||| || |||||||||| |||| || ||||||||||||||||| |||||||||||||||||  ||||||||||    
T  42506211 cactataacatcaaaattgtaatgagtaataccccactgtttgtacaatgacatcaaaagttcagtcctcatagtat 42506135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 769 - 882
Target Start/End: Original strand, 11466815 - 11466925
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||| | | ||||||||||||||| ||||||| |   ||||| || |  || ||| ||||| |||||||||||||||||||||    
T  11466815 ggaaaattctatggtgaagtcttgagaatgacttttctgatgaagttaaga---ctataacatcgcaagtgttgtgagtaacaccccactgtttgtacag 11466911  T
Q  869 tgacatcaaaagtt 882  Q
    || |||||||||||    
T  11466912 tggcatcaaaagtt 11466925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 772 - 884
Target Start/End: Complemental strand, 22446247 - 22446138
Alignment:
Q  772 aaattctacggtgaagtcatcaaaatgacttttct-gattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    |||||||||||||||||||| |||||||||||| | | | |||||||||    ||||||| ||||| | ||||||| ||||||||||| |||||||||||    
T  22446247 aaattctacggtgaagtcatgaaaatgactttttttggtgaagttaacat---tatatcatcaaaaatatagtgagtaacaccccact-tttgtacagtg 22446152  T
Q  871 acatcaaaagttca 884  Q
     |||||||||||||    
T  22446151 gcatcaaaagttca 22446138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 21193597 - 21193710
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||| ||||||| | ||||||||||||| | |||||||||   || |   | ||||| ||| ||||| |||||||||||||||||| ||    
T  21193597 ggaaaattctatggtaaagtcatgagaatgacttttctggtgaagttaaca---ctgttgaatcaaaagtgttgtgagtaacaccccactgtttgtagag 21193693  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  21193694 tgacatcaaaagttcag 21193710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 26941445 - 26941332
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||| |||| || | |||||||||   |||||  | ||||||| || |||| |||||||||||||||||| |     
T  26941445 ggaaaattctatggtgaagtcataagaatgatttttttggtgaagttaaca---ctataaaatcaaaattataatgagtaacaccccactgtttgtataa 26941349  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  26941348 tgacatcaaaagttcag 26941332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 40552444 - 40552331
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | |||||||||| ||   |||||||||   ||||| || ||||| |||| |||| ||||| |||| |||||||||     
T  40552444 ggaaaattctatggtgaagtcatgagaatgacttttttggagaagttaaca---ctataacatcaaaaatgtaatgagtaacactccaccgtttgtacaa 40552348  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  40552347 tgacatcaaaagttcag 40552331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 48354932 - 48355057
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||| |||| || | |||||||||   |||||  |  |||| |||| |||| ||||||||| ||||||||||     
T  48354932 ggaaaattctatggtgaagtcatgagaatgatttttatggtgaagttaaca---ctataatattaaaaatgtaatgagtaacaccccattgtttgtacaa 48355028  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    || |||||||||||||| |||||||||||    
T  48355029 tggcatcaaaagttcagttctcatagtat 48355057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 821 - 897
Target Start/End: Original strand, 47481562 - 47481638
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||||| || ||||| |||| |||| |||||||||||||||||| | |||||||||||||| ||| ||||||||||    
T  47481562 cactataacatcaaaaatgtaatgagtaacaccccactgtttgtagaatgacatcaaaagtttagccctcatagtat 47481638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 822 - 897
Target Start/End: Complemental strand, 20373431 - 20373356
Alignment:
Q  822 actatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    |||||| || ||||| ||||  ||| |||||||||||||||||||| ||||||||||||||||| |||||| ||||    
T  20373431 actataacatcaaaaatgtaacgagtaacaccccactgtttgtacaatgacatcaaaagttcagttctcatggtat 20373356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 782 - 903
Target Start/End: Original strand, 40935995 - 40936113
Alignment:
Q  782 gtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagt 881  Q
    |||||||||| | ||||| ||||||| | |||||||||   ||||| || ||||| ||| | ||| |||||| || ||||| ||||||||||||||||||    
T  40935995 gtgaagtcatgagaatgatttttctggtgaagttaaca---ctatagcatcaaaagtgttgcgagtaacacctcattgtttatacagtgacatcaaaagt 40936091  T
Q  882 tcagctctcatagtataatcta 903  Q
    ||||  |||||||||| |||||    
T  40936092 tcagtcctcatagtatcatcta 40936113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 764 - 885
Target Start/End: Complemental strand, 7327673 - 7327554
Alignment:
Q  764 tttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttg 863  Q
    |||| ||||||||||| |||||||| || | |||||||||| |  | |||||||   ||||||| || ||||| ||| ||||| ||||| ||| | ||||    
T  7327673 ttttaggaaaattctatggtgaagttatgagaatgacttttttagtgaagttaaa--cactataacatcaaaagtgttgtgagtaacactccattatttg 7327576  T
Q  864 tacagtgacatcaaaagttcag 885  Q
    ||||||||||||||||||||||    
T  7327575 tacagtgacatcaaaagttcag 7327554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 22450959 - 22451072
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||| ||||||| | |||| ||||   ||||| || ||||| ||||||||| | |||| |||||||||||  |    
T  22450959 ggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaaca---ctatagcatcaaaagtgtagtgagtagcacctcactgtttgtatgg 22451055  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  22451056 tggcatcaaaagttcag 22451072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 34132926 - 34133039
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||||||   ||||||||  |||||||||||| || | || ||||||   |||||  | ||||| ||| ||||| ||||||||||||||||||||     
T  34132926 ggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaaca---ctatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaa 34133022  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  34133023 tgacatcaaaagttcag 34133039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 759 - 817
Target Start/End: Complemental strand, 53812034 - 53811976
Alignment:
Q  759 ttttatttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaa 817  Q
    |||| ||| |||||||||||||||||||||||| | ||||||||||||||| |||||||    
T  53812034 ttttttttatggaaaattctacggtgaagtcatgagaatgacttttctgatgaagttaa 53811976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 771 - 885
Target Start/End: Complemental strand, 53229336 - 53229224
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccc-cactgtttgtacagt 869  Q
    |||||| || ||||||||||| ||||| | ||||||| | || ||||||   ||||| || ||||| ||||||||||||||||| || ||||||||||||    
T  53229336 aaaattttaaggtgaagtcatgaaaattatttttctggtgaaattaaca---ctatagcatcaaaagtgtagtgagcaacaccctcaatgtttgtacagt 53229240  T
Q  870 gacatcaaaagttcag 885  Q
      ||||||||||||||    
T  53229239 tgcatcaaaagttcag 53229224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 784 - 885
Target Start/End: Complemental strand, 11357535 - 11357436
Alignment:
Q  784 gaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacacccc-actgtttgtacagtgacatcaaaagtt 882  Q
    |||||||| | ||||||||||||| | |||||||||   ||||| || ||||| | ||||||| |||||||| ||||||||||||||  |||||||||||    
T  11357535 gaagtcatgagaatgacttttctggtgaagttaaca---ctatagcatcaaaagtatagtgagtaacacccccactgtttgtacagttgcatcaaaagtt 11357439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 821 - 893
Target Start/End: Complemental strand, 21009938 - 21009866
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcata 893  Q
    ||||||| || ||||| |||| |||| ||||||||||| |||||| | |||||||||||||||||| ||||||    
T  21009938 cactataacatcaaaaatgtaatgagtaacaccccactatttgtagaatgacatcaaaagttcagccctcata 21009866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 821 - 885
Target Start/End: Complemental strand, 44186637 - 44186573
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||||| || ||||| ||| ||||| |||||||| |||||| ||||||||||||||||||||||    
T  44186637 cactatagcatcaaaagtgttgtgagtaacaccccgctgtttatacagtgacatcaaaagttcag 44186573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 833 - 884
Target Start/End: Original strand, 2007985 - 2008036
Alignment:
Q  833 aaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttca 884  Q
    |||| ||| ||||| ||||||||||||||||||||||| |||||||||||||    
T  2007985 aaaagtgttgtgagtaacaccccactgtttgtacagtggcatcaaaagttca 2008036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 8383237 - 8383308
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||| ||||||| ||  | |||||||||||||||||||||||||| |||| | |||||||| ||||    
T  8383237 gacacggacattgacacgccgacaccgctaataatttgagaaaatcatataattcagtgtaattataagtgt 8383308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 596 - 671
Target Start/End: Complemental strand, 23184144 - 23184069
Alignment:
Q  596 acactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgt 671  Q
    |||||||||||||  ||| | ||||||||||| ||||||||||| ||| || ||||||||||||||| | ||||||    
T  23184144 acactgacacgtcaatattgataataatttgacaaaatcatataattctatgtaattatatgtgttggtattgtgt 23184069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 52041108 - 52040994
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacacccc-actgtttgtaca 867  Q
    ||||||||||  ||||||||||| | ||||||||||||| | |||||||    |||||| || ||||| ||||||||| ||| |||| | |||||||| |    
T  52041108 ggaaaattctgaggtgaagtcatgagaatgacttttctggtgaagttaa---tactataacatcaaaagtgtagtgagtaactccccaaatgtttgtata 52041012  T
Q  868 gtgacatcaaaagttcag 885  Q
    ||| ||||||||||||||    
T  52041011 gtggcatcaaaagttcag 52040994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 819
Target Start/End: Complemental strand, 55343469 - 55343419
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaaca 819  Q
    ||||||||||| ||||||||||  ||||||||||||||||| |||||||||    
T  55343469 ggaaaattctatggtgaagtcacgaaaatgacttttctgatgaagttaaca 55343419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 832 - 897
Target Start/End: Complemental strand, 4761774 - 4761709
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||| |||| |||| |||||  ||||||||||||| |||||||||||||||||  ||||||||||    
T  4761774 caaaaatgtaatgagtaacacttcactgtttgtacaatgacatcaaaagttcagtcctcatagtat 4761709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 595 - 658
Target Start/End: Original strand, 1438790 - 1438853
Alignment:
Q  595 gacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgt 658  Q
    |||||||||||  ||  |||||||| ||||||||||||||| ||| |||| |||||||||||||    
T  1438790 gacactgacacaccgacatcgctaacaatttgagaaaatcacataattcagtataattatatgt 1438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 842 - 885
Target Start/End: Original strand, 43348319 - 43348362
Alignment:
Q  842 gtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    |||||||||||||||||||||||  |||| ||||||||||||||    
T  43348319 gtgagcaacaccccactgtttgtttagtggcatcaaaagttcag 43348362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 660
Target Start/End: Complemental strand, 8039889 - 8039843
Alignment:
Q  614 cgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||||||||| ||||| |||| | |||||||||||||    
T  8039889 cgctaataatttgagaaaattatataattcagtgtaattatatgtgt 8039843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 657
Target Start/End: Original strand, 9624647 - 9624689
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatg 657  Q
    ||||||||||||||||||||| ||| |||||| ||||||||||    
T  9624647 gctaataatttgagaaaatcacataattcaatgtaattatatg 9624689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 589 - 671
Target Start/End: Complemental strand, 25948966 - 25948884
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgt 671  Q
    |||||||||||||||| | || ||  ||||||||||||| ||||||| ||| |||| | |||||||| |||||| ||| ||||    
T  25948966 gacacggacactgacatgccgatacggctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgt 25948884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 772 - 883
Target Start/End: Original strand, 32373466 - 32373572
Alignment:
Q  772 aaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtga 871  Q
    |||||||| | ||||||||| | |||||||||||  || |||||||||   ||||| || ||||| ||| ||||| ||| ||  |||||||||||||||     
T  32373466 aaattctatgatgaagtcatgagaatgacttttccaataaagttaaca---ctatagcatcaaaagtgttgtgagtaactcc--actgtttgtacagtgg 32373560  T
Q  872 catcaaaagttc 883  Q
    ||||||||||||    
T  32373561 catcaaaagttc 32373572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 768 - 860
Target Start/End: Original strand, 44891497 - 44891585
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgt 860  Q
    ||||||||| |||||||||||||| |||||||||||| || | |||||||   ||||||| || ||||| ||| ||||| |||| ||||||||    
T  44891497 tggaaaattatacggtgaagtcatgaaaatgactttt-tggtgaagttaa---cactataacatcaaaagtgttgtgagtaacatcccactgt 44891585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 646
Target Start/End: Complemental strand, 5441110 - 5441053
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaat 646  Q
    ||||| |||||||||||| ||| | |||||| ||||||||||||||| ||| ||||||    
T  5441110 gacacagacactgacacgccgtcaccgctaaaaatttgagaaaatcacataattcaat 5441053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 673
Target Start/End: Complemental strand, 17005671 - 17005614
Alignment:
Q  616 ctaataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgttg 673  Q
    |||||||||||| ||||||||||| |||| | |||||||| |||| | ||||||||||    
T  17005671 ctaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttg 17005614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 644
Target Start/End: Complemental strand, 23870640 - 23870583
Alignment:
Q  587 cggacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttca 644  Q
    |||| |||||||| |||||||||  | |||||||||||||| ||||||||||| ||||    
T  23870640 cggatacggacacggacacgtcgacaccgctaataatttgaaaaaatcatataattca 23870583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 656
Target Start/End: Complemental strand, 29112361 - 29112292
Alignment:
Q  587 cggacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatat 656  Q
    |||| |||||||||||||||| |  | | ||||| |||||||||||||||||| |||| | |||||||||    
T  29112361 cggatacggacactgacacgttgacaccactaattatttgagaaaatcatataattcagtgtaattatat 29112292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 660
Target Start/End: Original strand, 45451559 - 45451604
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||||||| ||| |||| |||||| ||||||||    
T  45451559 gctaataatttgagaaaatcacatacttcagtataataatatgtgt 45451604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 2e-30; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 769 - 895
Target Start/End: Original strand, 2959744 - 2959867
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||||   ||||| || ||||| |||||| || |||| ||||||||||||||||    
T  2959744 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaaca---ctataacatcaaaactgtagtaagtaacatcccactgtttgtacag 2959840  T
Q  869 tgacatcaaaagttcagctctcatagt 895  Q
    |||||||||||||||||  ||||||||    
T  2959841 tgacatcaaaagttcagtcctcatagt 2959867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 768 - 884
Target Start/End: Original strand, 38823209 - 38823322
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| | ||||||||||||| |||||||||   ||||||| || ||||||||| | ||| ||||||||||| ||||||||    
T  38823209 tggaaaattctatggtgaagtcatgagaatgacttttctggttaagttaa---cactatagcatcaaaattgttgcgagtaacaccccactatttgtaca 38823305  T
Q  868 gtgacatcaaaagttca 884  Q
    ||| |||||||||||||    
T  38823306 gtgtcatcaaaagttca 38823322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 1547283 - 1547408
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||||||||||| | |||||||||   ||||| ||  |||| ||| ||||| ||||| ||||||||||| |||    
T  1547283 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaaca---ctataacataaaaaatgttgtgagtaacactccactgtttgtgcag 1547379  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    || |||||||||||||| |||||||||||    
T  1547380 tggcatcaaaagttcagttctcatagtat 1547408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 16415641 - 16415767
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccc-cactgtttgtaca 867  Q
    ||||||||||| ||||||||||| | ||||||||||||| | |||||||   ||||||| || ||||| ||||||||| |||||||  | ||||||||||    
T  16415641 ggaaaattctaaggtgaagtcatgagaatgacttttctggtgaagttaa---cactatagcatcaaaagtgtagtgagtaacaccctaaatgtttgtaca 16415737  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
    ||| |||||||||||||||  |||||||||    
T  16415738 gtggcatcaaaagttcagccatcatagtat 16415767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 788 - 884
Target Start/End: Complemental strand, 9903215 - 9903122
Alignment:
Q  788 tcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttca 884  Q
    |||| |||||||||||| |||| |||||||||   ||||| || ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||    
T  9903215 tcatgaaaatgacttttttgatgaagttaaca---ctataacatcaaaactgtagtgagtaacaccccgctgtttgtacagtgacatcaaaagttca 9903122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 34012557 - 34012444
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| |||||||| ||| |||| |||||||||   ||||| || ||| | ||||||||| ||||| |||||||||||| ||    
T  34012557 ggaaaattctatggtgaagtcatgaaaatgacgtttatgatgaagttaaca---ctataacatcaacactgtagtgagtaacactccactgtttgtaaag 34012461  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  34012460 tggcatcaaaagttcag 34012444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 768 - 884
Target Start/End: Original strand, 42721034 - 42721147
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| ||||||| |||| || | ||||||   || ||||||||  |||| | ||||||| ||||||||||||||||||||    
T  42721034 tggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagtta---gccctatatcataaaaaatatagtgagtaacaccccactgtttgtaca 42721130  T
Q  868 gtgacatcaaaagttca 884  Q
    || ||||||||||||||    
T  42721131 gtaacatcaaaagttca 42721147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 48620633 - 48620746
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| | |||||| || ||||||||||||||  | |||||||||    |||| || ||||| ||| ||||| |||||||||||||||||||||    
T  48620633 ggaaaattctatgttgaagttattaaaatgacttttcttgtgaagttaacaa---tataacatcaaaagtgttgtgagtaacaccccactgtttgtacag 48620729  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  48620730 tgacatcaaaagttcag 48620746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 11742530 - 11742417
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| ||  ||||||| || | ||||||||||||| | |||||||||   |||||| | ||||| ||| || || |||||||||||||||||||||    
T  11742530 ggaaaattttatcgtgaagttatgagaatgacttttctggtgaagttaaca---ctatattatcaaaagtgttgtaagtaacaccccactgtttgtacag 11742434  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  11742433 tgacatcaaaagttcag 11742417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 18422647 - 18422760
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| |||||||||||| || | |||||||   ||||||| || ||||| | ||  ||| |||||||||| |||||||||     
T  18422647 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaa---cactataacatcaaaaatataacgagtaacaccccaccgtttgtacaa 18422743  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  18422744 tgacatcaaaagttcag 18422760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 771 - 897
Target Start/End: Original strand, 15752027 - 15752150
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| ||||||||||| | |||||||||| || | |||||||||   ||||| ||  |||| | ||||||| |||||| ||||||||||||| ||    
T  15752027 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaaca---ctataacataaaaaatatagtgagtaacacctcactgtttgtacaatg 15752123  T
Q  871 acatcaaaagttcagctctcatagtat 897  Q
     ||||||||||||||  ||||||||||    
T  15752124 gcatcaaaagttcagtcctcatagtat 15752150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 768 - 884
Target Start/End: Original strand, 3309143 - 3309255
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||| ||||||| | ||||||||||||| | |||||||   ||||||| || ||||| ||| ||||| |||| |||||||||||||||    
T  3309143 tggaaaattctatggtaaagtcatgagaatgacttttctggtaaagttaa---cactataacatcaaaagtgttgtgagtaaca-cccactgtttgtaca 3309238  T
Q  868 gtgacatcaaaagttca 884  Q
    |||  ||||||||||||    
T  3309239 gtggtatcaaaagttca 3309255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 10182188 - 10182063
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| |||||||||||| || | ||||||| |   || || ||  |||| | ||||| | ||||| |||||||||||||||    
T  10182188 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaaaa---ctgtaacataaaaaatatagtgcgtaacacgccactgtttgtacag 10182092  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    || ||||||||||||||  ||||||||||    
T  10182091 tggcatcaaaagttcagtcctcatagtat 10182063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 781 - 897
Target Start/End: Complemental strand, 28564949 - 28564836
Alignment:
Q  781 ggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaag 880  Q
    |||||||| || ||||||| |||| |||| |||||||||   ||||| || ||||| |||| |||| ||||||  |||||||||||| ||||||||||||    
T  28564949 ggtgaagttatgaaaatgatttttttgatgaagttaaca---ctataacatcaaaaatgtaatgagtaacaccttactgtttgtacaatgacatcaaaag 28564853  T
Q  881 ttcagctctcatagtat 897  Q
    |||||  ||||||||||    
T  28564852 ttcagtcctcatagtat 28564836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 913
Target Start/End: Original strand, 32267030 - 32267171
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| || ||||||||||| | |||||||||| |  | |||||||||    |||| || ||||| |||| |||| ||||||||||||||||||||     
T  32267030 ggaaaattttatggtgaagtcataagaatgactttttttgtgaagttaacaa---tataacatcaaaaatgtaatgagtaacaccccactgtttgtacaa 32267126  T
Q  869 tgacatcaaaagttcagctctcatagtataatctacccaccagat 913  Q
    ||||||||||||||||   |||||| ||| ||| ||||| |||||    
T  32267127 tgacatcaaaagttcactcctcatattatcatcaacccatcagat 32267171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 898
Target Start/End: Complemental strand, 37619076 - 37618948
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaa--caccccactgtttgtac 866  Q
    ||||||||||| |||||||| || | |||||||||| || | |||||||||   ||||| || ||||| | || |||| ||  ||||||||||||||||     
T  37619076 ggaaaattctatggtgaagttataagaatgacttttttggtgaagttaaca---ctataacatcaaaaatttaatgagtaaaacaccccactgtttgtaa 37618980  T
Q  867 agtgacatcaaaagttcagctctcatagtata 898  Q
    | ||||||||||||||||| ||||||||||||    
T  37618979 aatgacatcaaaagttcagttctcatagtata 37618948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 770 - 885
Target Start/End: Original strand, 14758038 - 14758150
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    ||||||| |||||||||||||| | ||||||||||||| | |||| ||||   ||||| || ||||| ||||||||| | ||| | ||||||||||| ||    
T  14758038 gaaaattttacggtgaagtcatgagaatgacttttctggtgaagtcaaca---ctataacatcaaaagtgtagtgagtagcacacaactgtttgtacggt 14758134  T
Q  870 gacatcaaaagttcag 885  Q
    | ||||||||||||||    
T  14758135 ggcatcaaaagttcag 14758150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 591 - 671
Target Start/End: Original strand, 6427332 - 6427412
Alignment:
Q  591 cacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgt 671  Q
    |||||||||||||||| |   | |||||||||||||||||||||| ||| |||||| ||||||||||||||| ||| ||||    
T  6427332 cacggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgt 6427412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 833 - 885
Target Start/End: Original strand, 21289729 - 21289781
Alignment:
Q  833 aaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    |||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  21289729 aaaaatgtagtgagtaacaccccactgtttgtacagtggcatcaaaagttcag 21289781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 769 - 882
Target Start/End: Original strand, 39393379 - 39393489
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||||||||||||||| || | |||||||||||| || |||||||   ||||||| || ||||| ||| ||||| || ||  || |||||||||||    
T  39393379 ggaaaattctacggtgaagttatgagaatgacttttctaatgaagttaa---cactatagcatcaaaagtgttgtgagtaatacttcattgtttgtacag 39393475  T
Q  869 tgacatcaaaagtt 882  Q
    || |||||||||||    
T  39393476 tggcatcaaaagtt 39393489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 15382929 - 15383042
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||||| || |||||||||||| || | || ||||||   ||||| || ||||| |||| |||| |||| ||||| |||||||||     
T  15382929 ggaaaattctatggtgaagttataaaaatgacttttttggtgaaattaaca---ctataacatcaaaaatgtaatgagtaacatcccaccgtttgtacaa 15383025  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  15383026 tgtcatcaaaagttcag 15383042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 19899949 - 19899824
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||| |||| || | |||||||||   ||||| || ||||| ||||  ||| |||||| ||||||||||| |     
T  19899949 ggaaaattctatggtgaagtcataataatgatttttttggtgaagttaaca---ctataacatcaaaaatgtaacgagtaacacctcactgtttgtagaa 19899853  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    || ||||||||||||| | ||||||||||    
T  19899852 tggcatcaaaagttcaaccctcatagtat 19899824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 781 - 885
Target Start/End: Original strand, 37451294 - 37451395
Alignment:
Q  781 ggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaag 880  Q
    ||||||||||| |||||||||||| || | |||||||||   ||||| || ||||| |||| | || ||||||| || ||||||||| ||||||||||||    
T  37451294 ggtgaagtcataaaaatgacttttttggtaaagttaaca---ctataacatcaaaaatgtaataagtaacaccctaccgtttgtacaatgacatcaaaag 37451390  T
Q  881 ttcag 885  Q
    |||||    
T  37451391 ttcag 37451395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 589 - 662
Target Start/End: Complemental strand, 16927264 - 16927191
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgttg 662  Q
    ||||| |||||||||||||||  || ||||||||||||| ||||||||||| |||| | ||||||||| |||||    
T  16927264 gacacagacactgacacgtcggcatagctaataatttgaaaaaatcatataattcagtgtaattatatatgttg 16927191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 832 - 897
Target Start/End: Original strand, 47279245 - 47279310
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||| ||| ||||| ||||||||||||||||||||||| |||| |||||||||  ||||||||||    
T  47279245 caaaagtgttgtgagtaacaccccactgtttgtacagtggcatcgaaagttcagtcctcatagtat 47279310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 8222127 - 8222249
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||||||||||||||| |||||||| ||| |  | |||||||   ||||||| || ||||| |||| |||| |||||| ||| ||   ||||     
T  8222127 ggaaaattctacggtgaagtcataaaaatgacctttttagtgaagttaa---cactataacatcaaaaatgtaatgagtaacaccacaccgt---tacaa 8222220  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    || |||||||||||||| |||||||||||    
T  8222221 tggcatcaaaagttcagttctcatagtat 8222249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 771 - 885
Target Start/End: Original strand, 41926161 - 41926272
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| |||||||| || ||||||| |||| |||| ||||||| |   ||||| || ||||| | ||||||| || | ||||||||||||||||||    
T  41926161 aaaattctatggtgaagttatgaaaatgatttttttgatgaagttaata---ctataacatcaaaaatatagtgagtaatatcccactgtttgtacagtg 41926257  T
Q  871 acatcaaaagttcag 885  Q
     ||||| ||||||||    
T  41926258 gcatcacaagttcag 41926272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 38503300 - 38503371
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||| ||||  ||  | |||||||||||||||||||||||||| |||| | |||||||||||||    
T  38503300 gacacggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgt 38503371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 586 - 660
Target Start/End: Complemental strand, 6415083 - 6415009
Alignment:
Q  586 ccggacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||||||| ||  ||||||||| |||||||||||||| ||| | || | |||||| ||||||    
T  6415083 ccggacacggacactgacacgccgacatcgctaattatttgagaaaatcacataatacagtttaattagatgtgt 6415009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 782 - 885
Target Start/End: Original strand, 4330288 - 4330390
Alignment:
Q  782 gtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacacccc-actgtttgtacagtgacatcaaaag 880  Q
    ||||||| || | ||||||||||||||| ||| |||   ||||||| || ||||| ||||||||| |||||||| | |||||||||||||  ||||||||    
T  4330288 gtgaagttatgagaatgacttttctgatgaagataaa--cactatagcatcaaaagtgtagtgagtaacacccccaatgtttgtacagtgggatcaaaag 4330385  T
Q  881 ttcag 885  Q
    |||||    
T  4330386 ttcag 4330390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 770 - 897
Target Start/End: Original strand, 10922724 - 10922848
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    ||||||| || |||||| |||| | ||||| |||| || | |||||||||   ||||| ||  |||| |||| |||| || ||||||||||||||||| |    
T  10922724 gaaaattttatggtgaaatcatgagaatgatttttttggtgaagttaaca---ctataacataaaaaatgtaatgagtaagaccccactgtttgtacaat 10922820  T
Q  870 gacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||   ||||||||||    
T  10922821 gacatcaaaagttcaatcctcatagtat 10922848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 848 - 897
Target Start/End: Original strand, 23999419 - 23999468
Alignment:
Q  848 aacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||||||||| |||||| | |||||||||||||||||| ||||||||||    
T  23999419 aacaccccactatttgtagaatgacatcaaaagttcagccctcatagtat 23999468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 840 - 885
Target Start/End: Complemental strand, 27564017 - 27563972
Alignment:
Q  840 tagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||||| ||||| |||||||||||| |||||||||||||||||||    
T  27564017 tagtgagtaacactccactgtttgtatagtgacatcaaaagttcag 27563972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 832 - 885
Target Start/End: Original strand, 40884869 - 40884922
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||| ||||||||| | ||||||||||||||||| ||| ||||||||||||||    
T  40884869 caaaagtgtagtgagtagcaccccactgtttgtacggtggcatcaaaagttcag 40884922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 821 - 885
Target Start/End: Original strand, 3534977 - 3535041
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||||| || ||||| ||| ||||| ||||||  ||||||||| ||||||||||||||||||||    
T  3534977 cactataacatcaaaagtgttgtgagtaacaccttactgtttgtgcagtgacatcaaaagttcag 3535041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 833 - 885
Target Start/End: Complemental strand, 27267318 - 27267266
Alignment:
Q  833 aaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    |||| |||||||||  |||||||||||||||||||||| ||| ||||||||||    
T  27267318 aaaaatgtagtgagtgacaccccactgtttgtacagtggcattaaaagttcag 27267266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 763 - 885
Target Start/End: Complemental strand, 30327138 - 30327019
Alignment:
Q  763 atttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgttt 862  Q
    |||||||||||||||||  |||||||||| |||||||||||| |  | || ||||   ||||||| || ||||| |||| |||| || |||| || ||||    
T  30327138 atttttggaaaattctatagtgaagtcataaaaatgactttttttgtgaatttaa---cactataacatcaaaaatgtaatgagtaatacccaaccgttt 30327042  T
Q  863 gtacagtgacatcaaaagttcag 885  Q
    ||||| |  ||||||||||||||    
T  30327041 gtacaatagcatcaaaagttcag 30327019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 767 - 885
Target Start/End: Complemental strand, 31621735 - 31621620
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||||||||||||||||||||| | ||||||||||||  | ||||   || ||||||| || ||||  |||| |||| | |||||| || |||||||    
T  31621735 ttggaaaattctacggtgaagtcatgagaatgacttttctagtgaagt---caacactataacatcaaaggtgtattgagtagcaccccgctatttgtac 31621639  T
Q  867 agtgacatcaaaagttcag 885  Q
     ||| |||||||| |||||    
T  31621638 ggtggcatcaaaaattcag 31621620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 821 - 885
Target Start/End: Original strand, 32216100 - 32216164
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||||| || ||||| ||||||||| ||||| |||||||||||||| || | ||||||||||||    
T  32216100 cactataacatcaaaaatgtagtgagtaacacaccactgtttgtacaatggcgtcaaaagttcag 32216164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 660
Target Start/End: Complemental strand, 398844 - 398773
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||||||| ||  | |||||||||||||| ||||||| ||| |||| | |||||||| ||||    
T  398844 gacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaattataggtgt 398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 850 - 897
Target Start/End: Complemental strand, 27227587 - 27227540
Alignment:
Q  850 caccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    |||| |||||||||||||||| ||||||||||||||  ||||||||||    
T  27227587 cacctcactgtttgtacagtggcatcaaaagttcagtcctcatagtat 27227540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 557 - 660
Target Start/End: Original strand, 36878410 - 36878512
Alignment:
Q  557 ttgcatgctatgaagcatggattcgtacgccggacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatat 656  Q
    ||||| ||||||||||| |||| || || | |||||  |||||||||||| ||  | |||||||||||||||||||||| ||| |||| | ||||||||     
T  36878410 ttgcaagctatgaagcacggatacggacac-ggacatagacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattatag 36878508  T
Q  657 gtgt 660  Q
    ||||    
T  36878509 gtgt 36878512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 586 - 653
Target Start/End: Complemental strand, 38078743 - 38078676
Alignment:
Q  586 ccggacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataatta 653  Q
    ||||||||| ||||||||||||||  |  ||||||||||||| ||||||| ||| |||||| ||||||    
T  38078743 ccggacacgaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaatta 38078676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 52903229 - 52903300
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||| ||||| || || || ||||||||| | ||||||||||| |||| | |||||||||||||    
T  52903229 gacacggacactaacacgccgataccgttaataatttaataaaatcatataattcagtgtaattatatgtgt 52903300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 653
Target Start/End: Original strand, 1262890 - 1262928
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataatta 653  Q
    ||||||||||||||||||||| ||| |||||||||||||    
T  1262890 gctaataatttgagaaaatcacataattcaatataatta 1262928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 590 - 644
Target Start/End: Complemental strand, 2896199 - 2896145
Alignment:
Q  590 acacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttca 644  Q
    ||||||||||||||||| ||  | |||||||||||||||||||||| ||| ||||    
T  2896199 acacggacactgacacgccgacaccgctaataatttgagaaaatcacataattca 2896145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 590 - 660
Target Start/End: Complemental strand, 19562699 - 19562629
Alignment:
Q  590 acacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||| ||||||||||| ||  |  ||||||||||||||||||||  |||||||| | |||||||||||||    
T  19562699 acacgaacactgacacgccgacactgctaataatttgagaaaatctcatagttcagtgtaattatatgtgt 19562629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 769 - 819
Target Start/End: Original strand, 22170750 - 22170800
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaaca 819  Q
    ||||||||||| |||||| |||| |||||||||||||| || |||||||||    
T  22170750 ggaaaattctatggtgaaatcatgaaaatgacttttctaatgaagttaaca 22170800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 769 - 819
Target Start/End: Original strand, 30254854 - 30254904
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaaca 819  Q
    ||||||||||| ||||||||||| | |||||||||| |||| |||||||||    
T  30254854 ggaaaattctatggtgaagtcataataatgacttttttgatgaagttaaca 30254904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 616 - 662
Target Start/End: Complemental strand, 35999374 - 35999328
Alignment:
Q  616 ctaataatttgagaaaatcatatagttcaatataattatatgtgttg 662  Q
    |||||||||| ||||||||||||| || | |||||||||||||||||    
T  35999374 ctaataatttaagaaaatcatataatttagtataattatatgtgttg 35999328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 848 - 885
Target Start/End: Complemental strand, 7079167 - 7079130
Alignment:
Q  848 aacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  7079167 aacacctcactgtttgtacaatgacatcaaaagttcag 7079130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 857 - 886
Target Start/End: Original strand, 38759610 - 38759639
Alignment:
Q  857 ctgtttgtacagtgacatcaaaagttcagc 886  Q
    ||||||||||||||||||||||||||||||    
T  38759610 ctgtttgtacagtgacatcaaaagttcagc 38759639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 2e-27; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 769 - 882
Target Start/End: Complemental strand, 16447066 - 16446956
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||   ||||||| || ||||||||||||||| |||||||||||||||||| |     
T  16447066 ggaaaattctatggtgaagtcatgaaaatgacttttctgataaagttaa---cactataacatcaaaattgtagtgagtaacaccccactgtttgtataa 16446970  T
Q  869 tgacatcaaaagtt 882  Q
    || |||||||||||    
T  16446969 tggcatcaaaagtt 16446956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 27083029 - 27082904
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||||| | ||||||||||| | |||||||||   ||||| || ||||| ||||||||| ||||||||||||||||| |||    
T  27083029 ggaaaattctatggtgaagtcatcagactgacttttctggtgaagttaaca---ctatagcatcaaaagtgtagtgagtaacaccccactgtttgtgcag 27082933  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    || ||| ||||||||||  ||||||||||    
T  27082932 tggcattaaaagttcagtcctcatagtat 27082904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 34894966 - 34895079
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |||||||   ||||||| || ||| | ||||||||| ||||| |||||||||||| ||    
T  34894966 ggaaaattctatggtgaagtcatgaaaatgacttttctgatgaagttaa---cactataacatcaacactgtagtgagtaacactccactgtttgtaaag 34895062  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  34895063 tggcatcaaaagttcag 34895079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 34952222 - 34952109
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||||||  || ||||||| ||||||||||||||| | |||||||||   |||||||| ||||| ||| ||||| |||| ||||||||||||||||    
T  34952222 ggaaaattctatagtaaagtcattaaaatgacttttctggtcaagttaaca---ctatatcatcaaaagtgttgtgagtaacagcccactgtttgtacag 34952126  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  34952125 tgacatcaaaagttcag 34952109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 36695157 - 36695044
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||  ||||||||||||||||| |||||||||   |||||  | ||||| ||| ||||| ||||||||||||||||||||     
T  36695157 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaaca---ctataatatcaaaaatgttgtgagtaacaccccactgtttgtacaa 36695061  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  36695060 tgacatcaaaagttcag 36695044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 758 - 897
Target Start/End: Complemental strand, 37970721 - 37970585
Alignment:
Q  758 attttatttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccac 857  Q
    ||||||| |||| ||| ||||| ||||||||||| | |||||||||| || | |||||||||   ||||| || ||||| |||| |||| ||||||||||    
T  37970721 attttatctttgtaaagttctatggtgaagtcatgagaatgacttttttggtgaagttaaca---ctataacatcaaaaatgtaatgagtaacaccccac 37970625  T
Q  858 tgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||| || ||||||||||||||| ||||||||||    
T  37970624 tgtttgtacaatgccatcaaaagttcagccctcatagtat 37970585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 768 - 885
Target Start/End: Complemental strand, 6098710 - 6098596
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| ||||| |||||| || | ||||||| |   ||||| || ||||| | ||||||| ||||||||||||||||||||    
T  6098710 tggaaaattctatggtgaagtcatgaaaataacttttttggtgaagttaata---ctatagcatcaaaaatatagtgagtaacaccccactgtttgtaca 6098614  T
Q  868 gtgacatcaaaagttcag 885  Q
    ||||||||||||||||||    
T  6098613 gtgacatcaaaagttcag 6098596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 1204926 - 1205051
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| |||||||||||||| | ||||||||||||| | |||||||||   ||||| ||  |||| ||||||||| |||||  |||||||||||||     
T  1204926 ggaaaattttacggtgaagtcatgagaatgacttttctggtgaagttaaca---ctataacataaaaaatgtagtgagtaacacatcactgtttgtacaa 1205022  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||  ||||||||||    
T  1205023 tgacatcaaaagttcagtcctcatagtat 1205051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 765 - 897
Target Start/End: Complemental strand, 10555397 - 10555268
Alignment:
Q  765 ttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgt 864  Q
    ||||||||||||||||||||||||||| | |||||||||| || | |||||||   ||||||| ||  |||| |||| |||| ||||| |||||||||||    
T  10555397 ttttggaaaattctacggtgaagtcatgagaatgacttttttggtgaagttaa---cactataacataaaaaatgtaatgagtaacactccactgtttgt 10555301  T
Q  865 acagtgacatcaaaagttcagctctcatagtat 897  Q
    ||| ||||||||||||||||   ||||||||||    
T  10555300 acaatgacatcaaaagttcaatcctcatagtat 10555268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 766 - 897
Target Start/End: Original strand, 12876105 - 12876233
Alignment:
Q  766 tttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgta 865  Q
    |||||||||||||| ||| ||||||  ||||||||||||||||| |||||||||   |||||  |  |||| ||| ||||| ||||||| ||||||||||    
T  12876105 tttggaaaattctatggttaagtcacgaaaatgacttttctgatgaagttaaca---ctataatataaaaaatgttgtgagtaacacccaactgtttgta 12876201  T
Q  866 cagtgacatcaaaagttcagctctcatagtat 897  Q
    || |||||||||||||||||  ||||||||||    
T  12876202 caatgacatcaaaagttcagtcctcatagtat 12876233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 767 - 885
Target Start/End: Original strand, 13307620 - 13307735
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||||||||| ||||||||||| | ||||| ||||||| | |||||||||   ||||| || ||||| ||| ||||| |||||| |||| |||||||    
T  13307620 ttggaaaattctatggtgaagtcatgagaatgatttttctggtgaagttaaca---ctataacatcaaaagtgttgtgagtaacacctcactatttgtac 13307716  T
Q  867 agtgacatcaaaagttcag 885  Q
    |||||||||||||||||||    
T  13307717 agtgacatcaaaagttcag 13307735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 768 - 897
Target Start/End: Complemental strand, 23854623 - 23854497
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    ||||||| |||||||||||||||| | |||||||||| || | |||||||||   ||||| ||  |||| |||| |||| ||||||| ||||||||| ||    
T  23854623 tggaaaagtctacggtgaagtcatgagaatgacttttttggtgaagttaaca---ctataacataaaaaatgtaatgagtaacacccaactgtttgtgca 23854527  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
     |||||||||||||||||  ||||||||||    
T  23854526 atgacatcaaaagttcagtcctcatagtat 23854497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 771 - 885
Target Start/End: Original strand, 465843 - 465954
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    |||||| || ||||||||||| |||||||||||| || | |||||||||   | ||| || ||||| ||| ||||| |||||||||||||||||||||||    
T  465843 aaaattttatggtgaagtcattaaaatgacttttgtggtgaagttaaca---cgataacatcaaaagtgttgtgagtaacaccccactgtttgtacagtg 465939  T
Q  871 acatcaaaagttcag 885  Q
     |||||||| |||||    
T  465940 gcatcaaaaattcag 465954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 1150296 - 1150183
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | |||||||||| || | ||||||||    ||||| || ||||| |||| |||| |||| |||||||||||||||     
T  1150296 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaacg---ctataacatcaaaaatgtaatgagtaacatcccactgtttgtacaa 1150200  T
Q  869 tgacatcaaaagttcag 885  Q
     ||||||||||||||||    
T  1150199 cgacatcaaaagttcag 1150183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 38643977 - 38644090
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||| |||| | |||||||||| || | |||||||||   ||||| || ||||| ||| ||||| |||||||||||||||||  ||    
T  38643977 ggaaaattctatggtgaaatcatgagaatgacttttttggtcaagttaaca---ctataacatcaaaagtgttgtgagtaacaccccactgtttgtctag 38644073  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  38644074 tggcatcaaaagttcag 38644090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 766 - 885
Target Start/End: Complemental strand, 5300140 - 5300024
Alignment:
Q  766 tttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgta 865  Q
    |||||||||||||| ||||||||||| | |||||||||| | || |||||||   ||||||| || ||||| ||| || || | ||| | ||||||||||    
T  5300140 tttggaaaattctatggtgaagtcatgagaatgacttttttaatgaagttaa---cactatagcatcaaaagtgttgtaagtagcactctactgtttgta 5300044  T
Q  866 cagtgacatcaaaagttcag 885  Q
    ||||| ||||||||||||||    
T  5300043 cagtggcatcaaaagttcag 5300024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 40862418 - 40862532
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||||||  |||||||||  ||||| ||||||||| | |||||||||  |  ||||||| |||  ||| ||||| ||||||||||||||||||||     
T  40862418 ggaaaattctatagtgaagtcacgaaaataacttttctggtgaagttaacactataatatcaaaaaa--tgttgtgagtaacaccccactgtttgtacaa 40862515  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  40862516 tggcatcaaaagttcag 40862532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 41362517 - 41362639
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||||| || |||||||||||| || | |||||||||  |  |||      ||| ||||||||| ||||||||||| |||||| ||    
T  41362517 ggaaaattctatggtgaagttatgaaaatgacttttttggtgaagttaacactagcata------aaaatgtagtgagtaacaccccactatttgtatag 41362610  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||  ||||||||||    
T  41362611 tgacatcaaaagttcagacctcatagtat 41362639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 9864147 - 9864260
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||||||   ||||||||  |||||||||||| || | || ||||||   |||||  | ||||| ||| ||||| ||||||||||||||||||||     
T  9864147 ggaaaattctataatgaagtcacgaaaatgacttttttggtgaaattaaca---ctatagtatcaaaaatgttgtgagtaacaccccactgtttgtacaa 9864243  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  9864244 tgacatcaaaagttcag 9864260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 16222862 - 16222987
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||||||||||||| |||| | ||||||||||||| | || ||||||   ||||| ||  |||| | ||||||| |   |||||| |||||||||     
T  16222862 ggaaaattctacggtgaaatcatgagaatgacttttctggtgaatttaaca---ctataacataaaaaatatagtgagtagttccccacagtttgtacaa 16222958  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||  ||||||||||    
T  16222959 tgacatcaaaagttcagtcctcatagtat 16222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 615 - 660
Target Start/End: Complemental strand, 12606882 - 12606837
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||    
T  12606882 gctaataatttgagaaaatcatataattcaatgtaattatatgtgt 12606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 769 - 884
Target Start/End: Complemental strand, 43643786 - 43643674
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||||| || || | |||||||||   ||||| || ||||| |||| |||| ||||| | ||||||||||||     
T  43643786 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaaca---ctataacatcaaaaatgtaatgagtaacactctactgtttgtacaa 43643690  T
Q  869 tgacatcaaaagttca 884  Q
    ||||||| ||||||||    
T  43643689 tgacatccaaagttca 43643674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 592 - 660
Target Start/End: Original strand, 34897068 - 34897136
Alignment:
Q  592 acggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||| |||||||||  | |||||||||||||||||||||| ||| |||| | |||||||||||||    
T  34897068 acggacacagacacgtcgacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 34897136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 886
Target Start/End: Complemental strand, 8803997 - 8803887
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||||||||    ||||||||| || | |||||||||   ||||| || ||||| |||| |||| ||||| ||||| |||||| |     
T  8803997 ggaaaattctatggtgaagtcat----atgacttttttggtgaagttaaca---ctataacatcaaaaatgtaatgagtaacactccactatttgtagaa 8803905  T
Q  869 tgacatcaaaagttcagc 886  Q
    ||||||||||||||||||    
T  8803904 tgacatcaaaagttcagc 8803887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 601 - 663
Target Start/End: Original strand, 9936806 - 9936868
Alignment:
Q  601 gacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgttgt 663  Q
    |||||||||  |||| ||||||||| ||||||| ||||| ||||||||||| |||||||||||    
T  9936806 gacacgtcgacatcgataataatttaagaaaatgatataattcaatataatcatatgtgttgt 9936868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 30654774 - 30654649
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| || ||||||||||| | | ||| |||| || | |||||||||   ||||| ||  |||| |||| |||| |||||||||||||||||  |     
T  30654774 ggaaaattttatggtgaagtcataagagtgatttttttggtgaagttaaca---ctataacataaaaaatgtaatgagtaacaccccactgtttgttgaa 30654678  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    ||||||||||||||||||  |||||||||    
T  30654677 tgacatcaaaagttcagccttcatagtat 30654649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 660
Target Start/End: Complemental strand, 31236630 - 31236585
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||||||| ||| |||||| |||||||||||||    
T  31236630 gctaataatttgagaaaatcacataattcaatgtaattatatgtgt 31236585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 589 - 662
Target Start/End: Original strand, 36934650 - 36934723
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgttg 662  Q
    |||||||||||| ||||||||  | ||||||||||| || ||||||| ||| |||| | |||||||||||||||    
T  36934650 gacacggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaattatatgtgttg 36934723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 833 - 897
Target Start/End: Complemental strand, 1149762 - 1149698
Alignment:
Q  833 aaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    |||| |||| |||| |||| ||||||||||||||| ||||||||||||||| |  ||||||||||    
T  1149762 aaaaatgtaatgagtaacaacccactgtttgtacaatgacatcaaaagttctgtcctcatagtat 1149698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 617 - 673
Target Start/End: Original strand, 11803267 - 11803323
Alignment:
Q  617 taataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgttg 673  Q
    ||||||||| ||||||||| ||| |||| | ||||||||||||||| ||||||||||    
T  11803267 taataatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgttg 11803323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 589 - 653
Target Start/End: Original strand, 22651956 - 22652020
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataatta 653  Q
    |||||||||||||||||| ||  |  ||||||||||||| ||||||| ||| |||||||||||||    
T  22651956 gacacggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataatta 22652020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 660
Target Start/End: Complemental strand, 8798882 - 8798839
Alignment:
Q  617 taataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||    
T  8798882 taataatttgagaaaataacataattcaatataattatatgtgt 8798839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 767 - 817
Target Start/End: Original strand, 33197889 - 33197939
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaa 817  Q
    ||||||||||||| ||||||||||| | ||| | |||||||||||||||||    
T  33197889 ttggaaaattctatggtgaagtcatgagaataatttttctgattaagttaa 33197939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 766 - 819
Target Start/End: Original strand, 15009238 - 15009291
Alignment:
Q  766 tttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaaca 819  Q
    |||||||||||||| ||||||||||| | |||||||||| || | |||||||||    
T  15009238 tttggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaaca 15009291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 660
Target Start/End: Complemental strand, 20679468 - 20679403
Alignment:
Q  595 gacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||| ||||  | | |||||||||||||||||||| |||||||| | |||||||| ||||    
T  20679468 gacactgacatgtcgacacccctaataatttgagaaaatcacatagttcagtgtaattataagtgt 20679403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 658
Target Start/End: Original strand, 29776016 - 29776085
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgt 658  Q
    |||||||||| ||||| ||||  |  |||||||||||||||||||||  || |||| |||||||||||||    
T  29776016 gacacggacattgacaagtcgacactgctaataatttgagaaaatcacgtaattcagtataattatatgt 29776085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 7e-27; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 38528411 - 38528287
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| ||||||  ||||||||| |||||||||   ||||| || |||||||||| |||| ||||||||| ||||| |||||    
T  38528411 ggaaaattctatggtgaagtcatgaaaatggtttttctgatgaagttaaca---ctataacatcaaaattgtaatgagtaacaccccattgtttatacag 38528315  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    ||||||||||||||||| |||||||||||    
T  38528314 tgacatcaaaagttcag-tctcatagtat 38528287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 767 - 884
Target Start/End: Original strand, 7693228 - 7693342
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||||||||| ||||||||||| ||||||||||||||| | |||||||   ||||||| || ||||| ||| ||||| |||| ||||||||||||||    
T  7693228 ttggaaaattctatggtgaagtcattaaaatgacttttctggtgaagttaa---cactataacatcaaaagtgttgtgagtaacatcccactgtttgtac 7693324  T
Q  867 agtgacatcaaaagttca 884  Q
    |||| |||||||||||||    
T  7693325 agtggcatcaaaagttca 7693342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 770 - 885
Target Start/End: Original strand, 32563150 - 32563262
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    |||||||||| ||||||||||| ||||||| ||||||||| |||||||||   ||||| || ||||| ||| ||||| ||||| ||||||| ||||||||    
T  32563150 gaaaattctatggtgaagtcattaaaatgatttttctgatgaagttaaca---ctataacatcaaaagtgttgtgagtaacactccactgtctgtacagt 32563246  T
Q  870 gacatcaaaagttcag 885  Q
    ||||||||||||||||    
T  32563247 gacatcaaaagttcag 32563262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 771 - 885
Target Start/End: Original strand, 699152 - 699263
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    |||||| || |||||||| || | ||||||||||||||| |||||||||   ||||| ||  |||| | ||||||| |||||||||||||||||||||||    
T  699152 aaaattttatggtgaagttatgagaatgacttttctgatgaagttaaca---ctatagcataaaaaatctagtgagtaacaccccactgtttgtacagtg 699248  T
Q  871 acatcaaaagttcag 885  Q
    |||||||||||||||    
T  699249 acatcaaaagttcag 699263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 771 - 885
Target Start/End: Original strand, 5837557 - 5837668
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    |||||||||||||||| |||| | ||||||||||||| | ||| |||||   ||||| || ||||| ||| ||||| |||||||||||||||||||||||    
T  5837557 aaaattctacggtgaattcatgagaatgacttttctggtgaaggtaaca---ctatagcatcaaaagtgttgtgagtaacaccccactgtttgtacagtg 5837653  T
Q  871 acatcaaaagttcag 885  Q
    ||||||||| |||||    
T  5837654 acatcaaaatttcag 5837668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 769 - 867
Target Start/End: Complemental strand, 13956520 - 13956425
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    ||||||||||||||||||||||| |||||||||||||| || |||||||   ||||||| || ||||| ||||||||| |||||| |||||||||||||    
T  13956520 ggaaaattctacggtgaagtcatgaaaatgacttttctcatgaagttaa---cactataacatcaaaactgtagtgagtaacacctcactgtttgtaca 13956425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 769 - 882
Target Start/End: Original strand, 9200233 - 9200343
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| || ||||||||||| ||||| ||||||||| | |||||||||   ||||| || ||||| ||| ||||| |||||||||| ||||||||||    
T  9200233 ggaaaattttatggtgaagtcattaaaataacttttctggtgaagttaaca---ctataacatcaaaagtgttgtgagtaacaccccacagtttgtacag 9200329  T
Q  869 tgacatcaaaagtt 882  Q
    ||||||||||||||    
T  9200330 tgacatcaaaagtt 9200343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 768 - 885
Target Start/End: Complemental strand, 35511653 - 35511539
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||| ||| ||||||||||| |||||||| |||||||| |||||||||    |||| || ||| | ||||||||| ||||| |||||||||||| |    
T  35511653 tggaaaatcctatggtgaagtcatgaaaatgacgtttctgatgaagttaacat---tataacatcaacactgtagtgagtaacactccactgtttgtaaa 35511557  T
Q  868 gtgacatcaaaagttcag 885  Q
    ||||||||||||||||||    
T  35511556 gtgacatcaaaagttcag 35511539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 19119859 - 19119972
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | |||||||||| || | |||||||||   ||||| || ||||| ||| |  || |||||||||||||||||||||    
T  19119859 ggaaaattctatggtgaagtcatgagaatgacttttgtggtgaagttaaca---ctatagcatcaaaagtgttgctagtaacaccccactgtttgtacag 19119955  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  19119956 tgacatcaaaagttcag 19119972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 39572819 - 39572944
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||||||||||  ||||||||| |   |||||  |  |||| ||| ||||| ||||| ||||||||||| |||    
T  39572819 ggaaaattctatggtgaagtcatgagaatgacttttctagttaagttaata---ctataatataaaaaatgttgtgagtaacactccactgtttgtgcag 39572915  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    ||||||||||||||||| |||||||||||    
T  39572916 tgacatcaaaagttcagttctcatagtat 39572944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 768 - 885
Target Start/End: Complemental strand, 23116398 - 23116284
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||| ||||| |||||||||||| | || |||||||||    |||| || ||||| ||||||||| | ||||||||||||||||||    
T  23116398 tggaaaattctatggtgacgtcatgaaaatgactttttttatgaagttaacat---tataacatcaaaactgtagtgagtagcaccccactgtttgtaca 23116302  T
Q  868 gtgacatcaaaagttcag 885  Q
    |||  |||||||||||||    
T  23116301 gtggaatcaaaagttcag 23116284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 5112488 - 5112375
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| || ||||||||||| |||||||||||| || | ||||||| |   ||||| ||  |||| | ||||||| |||||||||||||||||||||    
T  5112488 ggaaaattttatggtgaagtcatgaaaatgacttttttggtgaagttaata---ctataacataaaaaatatagtgagtaacaccccactgtttgtacag 5112392  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  5112391 tggcatcaaaagttcag 5112375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 36860423 - 36860536
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||  ||||||| ||||||| | |||||||||   |||||  |  |||| ||| ||||| ||||||||||||||||||||     
T  36860423 ggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaaca---ctatagtataaaaaatgttgtgagtaacaccccactgtttgtacaa 36860519  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  36860520 tgacatcaaaagttcag 36860536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 771 - 882
Target Start/End: Original strand, 26268076 - 26268184
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    |||||||||| |||||||||| | ||||| ||||||| | |||||||||   ||||| || ||||| |||  |||| ||||||||||||||||||| |||    
T  26268076 aaaattctacagtgaagtcatgagaatgatttttctggtgaagttaaca---ctatagcatcaaaagtgttttgagtaacaccccactgtttgtacggtg 26268172  T
Q  871 acatcaaaagtt 882  Q
    ||||||||||||    
T  26268173 acatcaaaagtt 26268184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 771 - 897
Target Start/End: Complemental strand, 27318660 - 27318537
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||| ||||||||||||| | ||||| ||||||| | |||||||||   ||| | ||  |||| ||||||||| ||||| |||||||||||||| ||    
T  27318660 aaaattcaacggtgaagtcatgagaatgatttttctggtgaagttaaca---ctaaaacataaaaaatgtagtgagtaacacaccactgtttgtacaatg 27318564  T
Q  871 acatcaaaagttcagctctcatagtat 897  Q
    |||||||||||| || ||||| |||||    
T  27318563 acatcaaaagtttagttctcacagtat 27318537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 767 - 885
Target Start/End: Original strand, 36866760 - 36866875
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||||||||| ||||||||||  ||||||| ||||||| | |||||||||  |  ||||||| || |||||   ||| |||||||||||||||||||    
T  36866760 ttggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaacactataatatcaaaaatattgt---gagtaacaccccactgtttgtac 36866856  T
Q  867 agtgacatcaaaagttcag 885  Q
    | || ||||||||||||||    
T  36866857 aatggcatcaaaagttcag 36866875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 8742062 - 8741948
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaaca-ccccactgtttgtaca 867  Q
    ||||||||||| ||||||||||| | ||||||||||||| | |||||||   ||||||| || ||||| ||| ||||| |||| ||||| ||||||||||    
T  8742062 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaa---cactatagcatcaaaagtgttgtgagtaacacccccattgtttgtaca 8741966  T
Q  868 gtgacatcaaaagttcag 885  Q
     || ||||||||||||||    
T  8741965 atggcatcaaaagttcag 8741948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 12910350 - 12910480
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgttt-----g 863  Q
    ||||||||||| ||||||||||| |||||||||||| || | |||||||    |||||| || ||||| | ||||| | |||||||||||||||     |    
T  12910350 ggaaaattctatggtgaagtcatgaaaatgacttttttggtgaagttaa---aactataacatcaaaaatatagtgcgtaacaccccactgtttgtacag 12910446  T
Q  864 tacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||||||||||||||||||||  ||||||||||    
T  12910447 tacagtgacatcaaaagttcagtcctcatagtat 12910480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 822 - 897
Target Start/End: Original strand, 24886154 - 24886229
Alignment:
Q  822 actatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    |||||| || ||||| |||| |||| |||||||||||||||||||| |||||||||||||||||  ||||||||||    
T  24886154 actataacatcaaaaatgtaatgagtaacaccccactgtttgtacaatgacatcaaaagttcagtcctcatagtat 24886229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 1429320 - 1429207
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||| |||| ||||||||||| ||||||||| || || | |||||||||   ||||| || ||||| | ||||||| ||||||||||||||||||||     
T  1429320 ggaaaaatctatggtgaagtcatgaaaatgactcttttggtgaagttaaca---ctatagcatcaaaaatatagtgagtaacaccccactgtttgtacac 1429224  T
Q  869 tgacatcaaaagttcag 885  Q
    || |||||||| |||||    
T  1429223 tggcatcaaaaattcag 1429207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 30969499 - 30969374
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||||  ||||||||| | ||||| || |||| | |||||||||   ||||| || ||||| ||| ||||| ||||||||||| ||| ||||     
T  30969499 ggaaaattctacaatgaagtcatgagaatgatttatctggtgaagttaaca---ctataacatcaaaagtgttgtgagtaacaccccactatttatacaa 30969403  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||  ||||||||||    
T  30969402 tgacatcaaaagttcagtcctcatagtat 30969374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 35826658 - 35826533
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | |||||||||| |  | ||||||| |   ||||| || ||||| |||| |||| |||||  || |||||||||||    
T  35826658 ggaaaattctatggtgaagtcatgataatgactttttttgtgaagttaata---ctataacatcaaaaatgtactgagtaacacttcattgtttgtacag 35826562  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||  ||||||||||    
T  35826561 tgacatcaaaagttcagtcctcatagtat 35826533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 769 - 893
Target Start/End: Original strand, 22255181 - 22255303
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||| |||||||||||||||| ||||| |||||| || | |||||||||  |  | ||||| |||  |||| |||| |||||||||| |||||||||     
T  22255181 ggaaaactctacggtgaagtcataaaaataacttttttggtgaagttaacattataacatcaaaaaa--tgtaatgagtaacaccccaccgtttgtacaa 22255278  T
Q  869 tgacatcaaaagttcagctctcata 893  Q
    || |||||||||||||| |||||||    
T  22255279 tggcatcaaaagttcagttctcata 22255303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 771 - 882
Target Start/End: Complemental strand, 25501099 - 25500991
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| ||||||||||| | ||||||||||||| | |||||||   ||||||| || ||||| ||| ||||  |||||| ||||||||||||| ||    
T  25501099 aaaattctatggtgaagtcatgagaatgacttttctggtaaagttaa---cactatagcatcaaaagtgttgtgaataacacctcactgtttgtacactg 25501003  T
Q  871 acatcaaaagtt 882  Q
     |||||||||||    
T  25501002 ccatcaaaagtt 25500991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 821 - 897
Target Start/End: Original strand, 33908282 - 33908358
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||| ||||| ||||||||| | ||| ||||||||||||| ||| ||||||||||||||  ||||||||||    
T  33908282 cactatatcatcaaaagtgtagtgagtagcactccactgtttgtacggtggcatcaaaagttcagtcctcatagtat 33908358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 768 - 897
Target Start/End: Complemental strand, 14409502 - 14409377
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| | ||||| ||||||| | |||| ||||   ||||| || ||||| ||||||||| | ||||||||| ||  |||     
T  14409502 tggaaaattctatggtgaagtcatgagaatgatttttctggtgaagtcaaca---ctataacatcaaaaatgtagtgagtagcaccccactcttaatacg 14409406  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
    ||| |||||||||||||| |||||||||||    
T  14409405 gtggcatcaaaagttcag-tctcatagtat 14409377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 768 - 885
Target Start/End: Original strand, 40133384 - 40133498
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||  |||||||||||| || | |||||||||    ||||  | ||||| ||| ||||| ||||||||||| ||||||||    
T  40133384 tggaaaattctatggtgaagtcacgaaaatgacttttgtggtgaagttaacat---tatagtatcaaaaatgttgtgagtaacaccccactatttgtaca 40133480  T
Q  868 gtgacatcaaaagttcag 885  Q
     || ||||||||||||||    
T  40133481 atggcatcaaaagttcag 40133498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 767 - 882
Target Start/End: Original strand, 22019630 - 22019742
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||| ||||| |||||||| || | ||||||||||||| | ||||||| |   |||||  | ||||| ||| ||||| ||||||||| ||||||||     
T  22019630 ttggaaatttctatggtgaagttattagaatgacttttctggtgaagttaaaa---ctatagaatcaaaagtgttgtgagtaacaccccattgtttgtat 22019726  T
Q  867 agtgacatcaaaagtt 882  Q
    ||||||||||||||||    
T  22019727 agtgacatcaaaagtt 22019742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 770 - 881
Target Start/End: Complemental strand, 31705785 - 31705677
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    |||||||||| ||||||||||| ||||||| |||| || | |||||||   ||||||| || ||||| ||||  ||| ||||||| || ||||||||| |    
T  31705785 gaaaattctatggtgaagtcataaaaatgatttttttggtgaagttaa---cactataacatcaaaaatgtaacgagtaacaccctaccgtttgtacaat 31705689  T
Q  870 gacatcaaaagt 881  Q
    ||||||||||||    
T  31705688 gacatcaaaagt 31705677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 768 - 878
Target Start/End: Original strand, 15724489 - 15724596
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| |||||||| || | |||||||||| || | |||||||||   ||||| || ||||| | | ||||| ||||||||||||||| ||||    
T  15724489 tggaaaattctatggtgaagttatgagaatgacttttttggtgaagttaaca---ctataacatcaaaagttttgtgagtaacaccccactgtttataca 15724585  T
Q  868 gtgacatcaaa 878  Q
     ||||||||||    
T  15724586 atgacatcaaa 15724596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 763 - 897
Target Start/End: Complemental strand, 31786827 - 31786696
Alignment:
Q  763 atttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgttt 862  Q
    |||| ||||||||||||  |||||||  | | |||||||||| || | |||||||||   ||||| ||  |||| |||||||||||   |||||||||||    
T  31786827 atttatggaaaattctatagtgaagtagtgagaatgacttttttggtgaagttaaca---ctatagcatgaaaaatgtagtgagcactgccccactgttt 31786731  T
Q  863 gtacagtgacatcaaaagttcagctctcatagtat 897  Q
    |||||||| |||||||||||||   ||||||||||    
T  31786730 gtacagtggcatcaaaagttcaatcctcatagtat 31786696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 838 - 885
Target Start/End: Original strand, 8437032 - 8437079
Alignment:
Q  838 tgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||    
T  8437032 tgtagtgagtaacatcccattgtttgtacagtgacatcaaaagttcag 8437079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 589 - 671
Target Start/End: Complemental strand, 15410527 - 15410445
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgt 671  Q
    |||||||||||||||||| ||  | |||||||||||| ||||||| ||||  |||| | |||| |||||||||| ||||||||    
T  15410527 gacacggacactgacacgccgacaccgctaataatttaagaaaattatatgattcagtgtaatcatatgtgttggtgttgtgt 15410445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 851 - 885
Target Start/End: Complemental strand, 15992636 - 15992602
Alignment:
Q  851 accccactgtttgtacagtgacatcaaaagttcag 885  Q
    |||||||||||||||||||||||||||||||||||    
T  15992636 accccactgtttgtacagtgacatcaaaagttcag 15992602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 893
Target Start/End: Complemental strand, 22974257 - 22974136
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||||| || | ||||| |||| || | |||||||||   ||||| || |||||  ||| |||| |||| |||||||||||||||     
T  22974257 ggaaaattctatggtgaagttatgagaatgatttttttggtgaagttaaca---ctataacatcaaaaaagtaatgagtaacatcccactgtttgtacaa 22974161  T
Q  869 tgacatcaaaagttcagctctcata 893  Q
    | ||||||||||||||  |||||||    
T  22974160 taacatcaaaagttcaattctcata 22974136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 832 - 881
Target Start/End: Complemental strand, 6824596 - 6824547
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagt 881  Q
    ||||| ||| ||||| ||||| ||||||||||||||||||||||||||||    
T  6824596 caaaagtgttgtgagtaacactccactgtttgtacagtgacatcaaaagt 6824547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 660
Target Start/End: Complemental strand, 23012461 - 23012416
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||||||||||| || ||| |||||||||||||    
T  23012461 gctaataatttgagaaaatcatataatttaatgtaattatatgtgt 23012416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 832 - 885
Target Start/End: Original strand, 25668709 - 25668762
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||| ||| ||||| |||||||||||||||| |||||| ||||||||||||||    
T  25668709 caaaagtgttgtgagtaacaccccactgtttgaacagtggcatcaaaagttcag 25668762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 849 - 885
Target Start/End: Complemental strand, 21088864 - 21088828
Alignment:
Q  849 acaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||||||||||||||||| |||||||||||||||||    
T  21088864 acaccccactgtttgtacaatgacatcaaaagttcag 21088828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 616 - 656
Target Start/End: Complemental strand, 22423864 - 22423824
Alignment:
Q  616 ctaataatttgagaaaatcatatagttcaatataattatat 656  Q
    |||||||||||||||||||| ||| ||||||||||||||||    
T  22423864 ctaataatttgagaaaatcacataattcaatataattatat 22423824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 769 - 817
Target Start/End: Original strand, 22616494 - 22616542
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaa 817  Q
    ||||||||||| ||||||||||| ||||||||||||||| | |||||||    
T  22616494 ggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaa 22616542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 27330306 - 27330417
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||| |   ||||||||||||| | |||||||   ||||||| || ||||| |||  |||| ||||||  ||||||||||||     
T  27330306 ggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaa---cactataacatcaaaagtgt--tgagtaacaccttactgtttgtacaa 27330400  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  27330401 tggcatcaaaagttcag 27330417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 660
Target Start/End: Complemental strand, 32630786 - 32630743
Alignment:
Q  617 taataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||| ||||| |||||| |||||||||||||    
T  32630786 taataatttgagaaaattatataattcaatgtaattatatgtgt 32630743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 593 - 655
Target Start/End: Original strand, 30098310 - 30098372
Alignment:
Q  593 cggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattata 655  Q
    |||||||||||||| ||  | || ||||||||||||||||||| ||| |||||| ||||||||    
T  30098310 cggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaattata 30098372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 617 - 671
Target Start/End: Complemental strand, 38749614 - 38749560
Alignment:
Q  617 taataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgt 671  Q
    ||||||||||| ||||| | ||| |||||| ||||||||||||||| ||||||||    
T  38749614 taataatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgt 38749560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 660
Target Start/End: Complemental strand, 6471942 - 6471897
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||||||| ||| |||| | |||||||||||||    
T  6471942 gctaataatttgagaaaatcacataattcagtgtaattatatgtgt 6471897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 771 - 804
Target Start/End: Complemental strand, 7209037 - 7209004
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgactttt 804  Q
    ||||||||||||||||||||| ||||||||||||    
T  7209037 aaaattctacggtgaagtcataaaaatgactttt 7209004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 832 - 897
Target Start/End: Complemental strand, 14919643 - 14919578
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||| |||| |||| |||||| |||||||| || | |||||||||||||||||  ||||||||||    
T  14919643 caaaaatgtaatgagtaacacctcactgtttatataatgacatcaaaagttcagtcctcatagtat 14919578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 822 - 879
Target Start/End: Original strand, 42342783 - 42342840
Alignment:
Q  822 actatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaa 879  Q
    |||||| || ||||| ||| ||||| || |||||||||||| ||||||||||||||||    
T  42342783 actataacatcaaaaatgttgtgagtaataccccactgtttatacagtgacatcaaaa 42342840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 771 - 897
Target Start/End: Original strand, 7889 - 8012
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| |||||||| || | |||||||||| |||| |||||||||   ||||| || |||||||||| |||| |||||||||||||||||||| ||    
T  7889 aaaattctatggtgaagttataagaatgacttttttgatgaagttaaca---ctataacatcaaaattgtaatgagtaacaccccactgtttgtacaatg 7985  T
Q  871 acatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||  ||||||||||    
T  7986 acatcaaaagttcagtcctcatagtat 8012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 2e-24; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 7334769 - 7334894
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||||||||||||| | | |||||||||| |||| |||||||||   ||||| ||  |||  |||| |||| ||||||||||||||||||||     
T  7334769 ggaaaattctacggtgaagtcgtgagaatgacttttttgatgaagttaaca---ctataacataaaatatgtaatgagtaacaccccactgtttgtacaa 7334865  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    ||||||||||||||||| |||||||||||    
T  7334866 tgacatcaaaagttcagttctcatagtat 7334894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 767 - 882
Target Start/End: Original strand, 12165725 - 12165837
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||||||||||||||||||| | ||||||||||||||| | |||||||   ||||||| || | ||| ||| ||||| |||||||||||||||||||    
T  12165725 ttggaaaattctacggtgaagtcgttaaaatgacttttctggtgaagttaa---cactatagcatccaaagtgttgtgagtaacaccccactgtttgtac 12165821  T
Q  867 agtgacatcaaaagtt 882  Q
    |||| |||||||||||    
T  12165822 agtggcatcaaaagtt 12165837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 768 - 885
Target Start/End: Complemental strand, 5657668 - 5657554
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| | ||||||||||||  | |||||||||   ||||| || ||||| ||| ||||| ||||||||||||||||||||    
T  5657668 tggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaaca---ctataacatcaaaagtgttgtgagtaacaccccactgtttgtaca 5657572  T
Q  868 gtgacatcaaaagttcag 885  Q
    ||| ||||||||||||||    
T  5657571 gtggcatcaaaagttcag 5657554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 30055501 - 30055627
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttct-gattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    ||||||||||| ||||||||||| | |||||||||| | ||| |||||||||   |||||  | |||||||||| |||| ||||||||||||||||||||    
T  30055501 ggaaaattctatggtgaagtcataagaatgactttttttgatgaagttaaca---ctataatatcaaaattgtaatgagtaacaccccactgtttgtaca 30055597  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
     |||||||||||||||||  ||||||||||    
T  30055598 atgacatcaaaagttcagtcctcatagtat 30055627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 767 - 885
Target Start/End: Original strand, 37109845 - 37109960
Alignment:
Q  767 ttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    ||||||||||||| ||||||||||| |||||||||||| || | |||||||   ||||||| ||  |||| |||| |||| |||||||||| ||||||||    
T  37109845 ttggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaa---cactataacataaaaaatgtaatgagtaacaccccaccgtttgtac 37109941  T
Q  867 agtgacatcaaaagttcag 885  Q
    | |||||||||||||||||    
T  37109942 aatgacatcaaaagttcag 37109960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 764 - 885
Target Start/End: Original strand, 4582889 - 4583007
Alignment:
Q  764 tttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttg 863  Q
    |||||||||||||||| ||||||||||  ||||||||||||||| | |||||||    ||||||  | ||||| ||| ||||| ||||||||||| ||||    
T  4582889 tttttggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaa---tactatagtatcaaaaatgttgtgagtaacaccccactatttg 4582985  T
Q  864 tacagtgacatcaaaagttcag 885  Q
    |||| |||||||||||||||||    
T  4582986 tacaatgacatcaaaagttcag 4583007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 21991611 - 21991724
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||| |||| || | |||||||||   ||||| || ||||||||| | ||| |||||||||||||||||||||    
T  21991611 ggaaaattctagggtgaagtcatgagaatgatttttatggtgaagttaaca---ctatagcatcaaaattgttgcgagtaacaccccactgtttgtacag 21991707  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  21991708 tgtcatcaaaagttcag 21991724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 765 - 897
Target Start/End: Original strand, 37346993 - 37347122
Alignment:
Q  765 ttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgt 864  Q
    |||||||||||| || ||||||||||| ||||||| |||| || | ||||||| |   ||||| || ||||| | || |||| ||||||||| |||||||    
T  37346993 ttttggaaaattttatggtgaagtcatgaaaatgatttttttggtgaagttaata---ctataccatcaaaaatataatgagtaacaccccattgtttgt 37347089  T
Q  865 acagtgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||||||  ||||||||||    
T  37347090 acagtgacatcaaaagttcagtcctcatagtat 37347122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 771 - 897
Target Start/End: Original strand, 11071182 - 11071306
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatg-acttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    ||||||||| ||||||||||| |||||| | |||| || | ||||||   | ||||||||| ||||| | ||| ||| ||||| ||||||||||||||||    
T  11071182 aaaattctatggtgaagtcatgaaaatgtatttttttggtaaagtta---gtactatatcatcaaaaatatagcgagtaacactccactgtttgtacagt 11071278  T
Q  870 gacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||| |||||||||||    
T  11071279 gacatcaaaagttcagttctcatagtat 11071306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 768 - 897
Target Start/End: Original strand, 27283718 - 27283844
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| |||||||| || ||||||| |||| || | |||||||||   ||||| || ||||| |||| |||| |||||||||| |||||||||    
T  27283718 tggaaaattctatggtgaagttataaaaatgatttttttggtgaagttaaca---ctataacatcaaaaatgtaatgagtaacaccccaccgtttgtaca 27283814  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
     ||| |||||||||||||  ||||||||||    
T  27283815 atgaaatcaaaagttcagtcctcatagtat 27283844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 17842772 - 17842659
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| |||||||||||| || | |||||||   ||||||| ||  |||| |||| |||| |||||||||| |||||||||     
T  17842772 ggaaaattctatggtgaagtcataaaaatgacttttttggtgaagttaa---cactataacataaaaaatgtaatgagtaacaccccaccgtttgtacaa 17842676  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||| ||||    
T  17842675 tgacatcaaaagctcag 17842659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 32821239 - 32821126
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| ||||||| |||| || | |||||||||    |||| || ||||| ||||||||| ||||| ||||||||||||||     
T  32821239 ggaaaattctatggtgaagtcatgaaaatgatttttttggtgaagttaacaa---tataacatcaaaaatgtagtgagtaacacaccactgtttgtacaa 32821143  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  32821142 tggcatcaaaagttcag 32821126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 41765264 - 41765139
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||| | ||||||||||| | ||||||||||||||| |||| || |   ||||| || ||||| ||||||||| | ||||||||||||||||| |    
T  41765264 ggaaaattccatggtgaagtcatgagaatgacttttctgataaagtcaata---ctatagcatcaaaagtgtagtgagtagcaccccactgtttgtacgg 41765168  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    || |||||||||| |||  ||||||||||    
T  41765167 tggcatcaaaagtccagtcctcatagtat 41765139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 770 - 897
Target Start/End: Original strand, 24211717 - 24211841
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    |||||||||| ||||||||||| | |||||||||| || | |||||||||   ||||| || ||||| |||| |||| ||||||| ||||||| || | |    
T  24211717 gaaaattctatggtgaagtcataagaatgacttttttggtgaagttaaca---ctataacatcaaaaatgtaatgagtaacaccctactgtttatagaat 24211813  T
Q  870 gacatcaaaagttcagctctcatagtat 897  Q
    | ||||||||||||||| ||||||||||    
T  24211814 ggcatcaaaagttcagccctcatagtat 24211841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 770 - 897
Target Start/End: Original strand, 38258521 - 38258645
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    |||||||||||||||||||||| ||||||| |||| || | |||||||   ||||||| ||  |||| |||| |||| |||||| ||| ||||||||| |    
T  38258521 gaaaattctacggtgaagtcataaaaatgatttttttggtgaagttaa---cactataacataaaaaatgtaatgagtaacaccacaccgtttgtacaat 38258617  T
Q  870 gacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||   ||||||||||    
T  38258618 gacatcaaaagttcaatcctcatagtat 38258645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 833 - 893
Target Start/End: Complemental strand, 9355951 - 9355891
Alignment:
Q  833 aaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcata 893  Q
    |||| |||||||||||| |||||||||||||||||||||||||||||||| || |||||||    
T  9355951 aaaaatgtagtgagcaataccccactgtttgtacagtgacatcaaaagtttagttctcata 9355891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 765 - 882
Target Start/End: Original strand, 6546490 - 6546604
Alignment:
Q  765 ttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgt 864  Q
    ||||||||||||||| ||||||||||| | ||||| ||||||  | |||||||||   ||||| || ||||| ||| | ||| ||||||||||| |||||    
T  6546490 ttttggaaaattctatggtgaagtcataagaatgatttttctagtgaagttaaca---ctatagcatcaaaagtgttgcgagtaacaccccactatttgt 6546586  T
Q  865 acagtgacatcaaaagtt 882  Q
    ||||| ||||||||||||    
T  6546587 acagtaacatcaaaagtt 6546604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 769 - 882
Target Start/End: Complemental strand, 12390816 - 12390706
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||||| |  ||||||| || | |||||||||   ||||| || ||||| |||| |||| |||| |||||||||||| |||    
T  12390816 ggaaaattctatggtgaagtcatcagatcgacttttttggtgaagttaaca---ctataacatcaaaagtgtaatgagtaacatcccactgtttgtgcag 12390720  T
Q  869 tgacatcaaaagtt 882  Q
    ||||||||||||||    
T  12390719 tgacatcaaaagtt 12390706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 768 - 897
Target Start/End: Complemental strand, 34362335 - 34362210
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| |||||| | || | ||||||||||||    |||||||   ||||||| || ||||| ||| ||||| ||||||||||||||||||||    
T  34362335 tggaaaattctatggtgaaattatgagaatgacttttctaggaaagttaa---cactatagcatcaaaagtgttgtgagtaacaccccactgtttgtaca 34362239  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
    ||| |||| ||||||||| |||||||||||    
T  34362238 gtggcatc-aaagttcagttctcatagtat 34362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 31520909 - 31520796
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| || | ||||||||| |||||||||||| || | ||||||| |   ||||| || ||||| | ||||||| ||||| ||| |||||||||||    
T  31520909 ggaaaattttatgatgaagtcatgaaaatgacttttttggtgaagttaata---ctataccatcaaaaatatagtgagtaacactccattgtttgtacag 31520813  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  31520812 tgacatcaaaagttcag 31520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 770 - 885
Target Start/End: Complemental strand, 48928748 - 48928636
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    ||||||| || ||||||||||| | ||||||||||||| | |||| ||||   ||||| || ||||| ||||||||| | ||||||||| ||||||| ||    
T  48928748 gaaaattttatggtgaagtcatgagaatgacttttctggtgaagtcaaca---ctataacatcaaaagtgtagtgagtagcaccccactatttgtacggt 48928652  T
Q  870 gacatcaaaagttcag 885  Q
    | ||||||||||||||    
T  48928651 gccatcaaaagttcag 48928636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 768 - 882
Target Start/End: Original strand, 8861259 - 8861370
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| | ||||||||||||    |||||||||   ||||| || ||||| |||  |||  ||||||||||||||||||||    
T  8861259 tggaaaattctatggtgaagtcatgagaatgacttttctcgcgaagttaaca---ctatagcatcaaaagtgttatgaataacaccccactgtttgtaca 8861355  T
Q  868 gtgacatcaaaagtt 882  Q
    ||| |||||||||||    
T  8861356 gtggcatcaaaagtt 8861370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 18797304 - 18797427
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | |||||||||| || | |||||||||  |  |||     |||| |||| |||| ||||||||||||||||||||     
T  18797304 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaacactaacata-----aaaaatgtaatgagtaacaccccactgtttgtacaa 18797398  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    ||||||||||||||||   ||||||||||    
T  18797399 tgacatcaaaagttcaatcctcatagtat 18797427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 783 - 885
Target Start/End: Original strand, 22687228 - 22687327
Alignment:
Q  783 tgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagtt 882  Q
    ||||||||| | ||||||||||||||| |||||||||   ||||| || ||||| ||| ||||| ||||| ||||||||||| |||||  ||||||||||    
T  22687228 tgaagtcatgagaatgacttttctgatgaagttaaca---ctataacatcaaaaatgttgtgagtaacactccactgtttgtgcagtggtatcaaaagtt 22687324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 771 - 885
Target Start/End: Complemental strand, 27421563 - 27421452
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| ||||||||| | | ||||| |||| || | |||||||||   ||||| || ||||| ||| ||||| ||||| |||||||||||||| ||    
T  27421563 aaaattctatggtgaagtcgtgataatgatttttttggtgaagttaaca---ctataacatcaaaagtgttgtgagtaacactccactgtttgtacaatg 27421467  T
Q  871 acatcaaaagttcag 885  Q
    |||||||||||||||    
T  27421466 acatcaaaagttcag 27421452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 764 - 885
Target Start/End: Original strand, 32432427 - 32432540
Alignment:
Q  764 tttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttg 863  Q
    |||| ||||||||||| ||||||||||  ||||||| ||||||| | |||||||||   ||||     ||||| ||| ||||| ||||||||| ||||||    
T  32432427 ttttaggaaaattctatggtgaagtcacgaaaatgatttttctggtgaagttaaca---ctat-----caaaaatgttgtgagtaacaccccattgtttg 32432518  T
Q  864 tacagtgacatcaaaagttcag 885  Q
    |||| |||||||||||||||||    
T  32432519 tacaatgacatcaaaagttcag 32432540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 26524513 - 26524388
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||||||||||| | | |||||   ||||||| || ||||| ||| ||||  ||||| ||| ||||||| |||    
T  26524513 ggaaaattctatggtgaagtcatgagaatgacttttctggtgatgttaa---cactataacatcaaaaatgttgtgactaacactccattgtttgtgcag 26524417  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    || |||||||||| |||  ||||||||||    
T  26524416 tggcatcaaaagtccagtcctcatagtat 26524388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 764 - 883
Target Start/End: Complemental strand, 44413571 - 44413454
Alignment:
Q  764 tttttggaaaattctacggtgaagtcatcaaaatgacttttctgatt-aagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgttt 862  Q
    |||||| ||||||||| ||| ||||||| |||||||||||| | | | |||||||||   ||||| || ||||| | ||||||| ||||||||| |||||    
T  44413571 tttttgaaaaattctatggtaaagtcatgaaaatgactttttttaatgaagttaaca---ctataacatcaaaaatatagtgagtaacaccccaatgttt 44413475  T
Q  863 gtacagtgacatcaaaagttc 883  Q
    ||||| ||| |||||||||||    
T  44413474 gtacactgaaatcaaaagttc 44413454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 832 - 897
Target Start/End: Original strand, 29173575 - 29173640
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||| ||| ||||| ||||| |||||||||||||| |||||||||||||||||  ||||||||||    
T  29173575 caaaagtgttgtgagtaacactccactgtttgtacaatgacatcaaaagttcagtcctcatagtat 29173640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 617 - 674
Target Start/End: Complemental strand, 35297723 - 35297666
Alignment:
Q  617 taataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgttga 674  Q
    ||||||||||||||||||| ||| |||| ||||||||||||||||| ||| |||||||    
T  35297723 taataatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgttga 35297666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 768 - 885
Target Start/End: Complemental strand, 10359401 - 10359287
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| | ||||||||||||| | || ||||      |||| || ||||| ||||||||| |||| || ||| ||| ||||    
T  10359401 tggaaaattctatggtgaagtcatgataatgacttttctggtaaaattaatct---tatagcatcaaaagtgtagtgagtaacatcctactatttataca 10359305  T
Q  868 gtgacatcaaaagttcag 885  Q
    ||||||||||||||||||    
T  10359304 gtgacatcaaaagttcag 10359287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 19206030 - 19206101
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||  ||||| ||  | |||||||||||||||||||||| ||| |||| |||||||||||||||    
T  19206030 gacacggacaccaacacgccgacaccgctaataatttgagaaaatcacataattcattataattatatgtgt 19206101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 771 - 884
Target Start/End: Original strand, 23111167 - 23111277
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||  ||||||||||| ||||||| ||||||| | |||||||   ||||||| || ||||| | | ||||| ||||| ||||| |||||||| ||    
T  23111167 aaaattctgtggtgaagtcatgaaaatgatttttctggtgaagttaa---cactataacatcaaaaatattgtgagtaacacaccactatttgtacaatg 23111263  T
Q  871 acatcaaaagttca 884  Q
     |||||||||||||    
T  23111264 gcatcaaaagttca 23111277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 26733284 - 26733355
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||||||||||  | |||||||||||||| ||||||| ||| |||| | |||||| ||||||    
T  26733284 gacacggacactgacacgtcgacaccgctaataatttgacaaaatcacataattcagtctaattaaatgtgt 26733355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 833 - 895
Target Start/End: Original strand, 38053522 - 38053584
Alignment:
Q  833 aaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagt 895  Q
    |||| |||| |||| || |||| |||||||||||| ||||||||||||||||| |||||||||    
T  38053522 aaaaatgtaatgagtaaaaccctactgtttgtacaatgacatcaaaagttcagttctcatagt 38053584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 43686016 - 43686128
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||  ||||||||||||  | | |||||||||   |||||  | ||||| ||| ||||| ||||||| ||||||||||||     
T  43686016 ggaaaattctatggtgaagtcacgaaaatgactttttgggtgaagttaaca---ctataatatcaaaaatgttgtgagtaacaccc-actgtttgtacaa 43686111  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  43686112 tggcatcaaaagttcag 43686128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 785 - 885
Target Start/End: Complemental strand, 48928466 - 48928369
Alignment:
Q  785 aagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttca 884  Q
    ||||||| | ||||||||||||| | |||| ||||   ||||| || ||||| ||||||||| | ||||||||| ||||||| ||| |||||||||||||    
T  48928466 aagtcatgagaatgacttttctggtgaagtcaaca---ctataacatcaaaagtgtagtgagtagcaccccactatttgtacggtgccatcaaaagttca 48928370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 660
Target Start/End: Original strand, 24146822 - 24146867
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||||    
T  24146822 gctaataattttagaaaatcacataattcaatataattatatgtgt 24146867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 832 - 885
Target Start/End: Original strand, 26980358 - 26980411
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||| ||| ||||| |||||||||| |||||||||||| ||||||||||||||    
T  26980358 caaaagtgttgtgagtaacaccccacggtttgtacagtggcatcaaaagttcag 26980411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 591 - 655
Target Start/End: Original strand, 1401007 - 1401071
Alignment:
Q  591 cacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattata 655  Q
    ||||||||||||||||  | ||||||||||||||||||||| ||| ||| |||| | ||||||||    
T  1401007 cacggacactgacacgctgatatcgctaataatttgagaaactcacataattcagtgtaattata 1401071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 660
Target Start/End: Complemental strand, 3520393 - 3520350
Alignment:
Q  617 taataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||| |||||||||||||||||| |||||| |||||||||||||    
T  3520393 taatcatttgagaaaatcatataattcaatgtaattatatgtgt 3520350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 3721074 - 3721144
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||  |||  || ||||||||||||||||||||| ||| || | |||||||||||||||    
T  3721074 gacacggacactgacatttcgacat-gctaataatttgagaaaatcacataatttagtataattatatgtgt 3721144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 765 - 819
Target Start/End: Original strand, 8299186 - 8299240
Alignment:
Q  765 ttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaaca 819  Q
    ||||| ||||||||| ||||||||||  ||||||||||||||| | |||||||||    
T  8299186 ttttgaaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaaca 8299240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 771 - 817
Target Start/End: Original strand, 19786282 - 19786328
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaa 817  Q
    ||||||||||| ||||||||| | |||||||||||| ||||||||||    
T  19786282 aaaattctacgatgaagtcatgagaatgacttttcttattaagttaa 19786328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 594 - 660
Target Start/End: Original strand, 32308105 - 32308171
Alignment:
Q  594 ggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||| ||  | |||||||||||||||||||||| ||| |||| | ||||| |||||||    
T  32308105 ggacactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattgtatgtgt 32308171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 660
Target Start/End: Original strand, 9482912 - 9482985
Alignment:
Q  587 cggacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||| ||||||||||||||  ||  |||||| ||||||||||||||||| | | |||| | |||||||||||||    
T  9482912 cggatacggacactgacacaccgacatcgctgataatttgagaaaatcacacaattcagtgtaattatatgtgt 9482985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 770 - 885
Target Start/End: Complemental strand, 33688446 - 33688335
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    ||||||| || |||||||| || | ||||||||||||| | |||||||||   ||||| || ||||| |||  |||| |||| || ||||||||| ||||    
T  33688446 gaaaattatatggtgaagttatgagaatgacttttctggt-aagttaaca---ctataacatcaaaagtgttatgagtaacatcctactgtttgtccagt 33688351  T
Q  870 gacatcaaaagttcag 885  Q
    | ||||||||||||||    
T  33688350 ggcatcaaaagttcag 33688335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 595 - 660
Target Start/End: Complemental strand, 42720963 - 42720898
Alignment:
Q  595 gacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||| |  | |||||||||||||| ||||||| ||| || ||| |||||||||||||    
T  42720963 gacactgacacgttgacaccgctaataatttgaaaaaatcacataattaaatgtaattatatgtgt 42720898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 2e-24; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 8513233 - 8513346
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||||||||||| | |||||||||   |||||  | ||||| ||| ||||| |||||||||||||||||||||    
T  8513233 ggaaaattctatggtgaagtcatgagaatgacttttctggtgaagttaaca---ctataatatcaaaagtgttgtgagtaacaccccactgtttgtacag 8513329  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  8513330 tgacatcaaaagttcag 8513346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 1945833 - 1945959
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttct-gattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    ||||||||||||||||||||||| | |||||||||| | | | |||||||||   ||||| || ||||| |||| |||| |||||||||||||||||| |    
T  1945833 ggaaaattctacggtgaagtcataagaatgactttttttggtgaagttaaca---ctataacatcaaaaatgtaatgagtaacaccccactgtttgtaga 1945929  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
     |||||||||||||||||| ||||||||||    
T  1945930 atgacatcaaaagttcagccctcatagtat 1945959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 4319007 - 4318882
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | |||||||||| || | |||||||||   ||||| || ||||| |||  |||| |||||||||||||||||||||    
T  4319007 ggaaaattctatggtgaagtcatgagaatgacttttttggtgaagttaaca---ctataacatcaaaagtgttatgagtaacaccccactgtttgtacag 4318911  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||| | | ||||||||    
T  4318910 tgacatcaaaagttcaacccccatagtat 4318882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 768 - 897
Target Start/End: Complemental strand, 7235219 - 7235094
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| |||||||| || | ||||||||||| | | |||| ||||   ||||| || ||||| ||||||||| | |||||||||||||||||     
T  7235219 tggaaaattctatggtgaagttatgagaatgacttttccggtgaagtcaaca---ctataacatcaaaagtgtagtgagtagcaccccactgtttgtacg 7235123  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
    ||| |||||||||||||| |||||||||||    
T  7235122 gtgccatcaaaagttcag-tctcatagtat 7235094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 5627391 - 5627516
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | |||||||||| || | |||||||||   ||||| ||  |||| | || |||| ||||||||||| |||||| |     
T  5627391 ggaaaattctaaggtgaagtcataagaatgacttttttggtgaagttaaca---ctataacataaaaaatataatgagtaacaccccactatttgtagaa 5627487  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||| ||||||||||    
T  5627488 tgacatcaaaagttcagccctcatagtat 5627516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 769 - 897
Target Start/End: Original strand, 18498433 - 18498559
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacacccc-actgtttgtaca 867  Q
    |||||| ||||  |||||||||| | ||||||||| ||| | |||||||||    |||| || ||||| |||||||||||||||||| || |||||||||    
T  18498433 ggaaaaatctatagtgaagtcatgagaatgactttcctggtgaagttaacat---tatagcatcaaaagtgtagtgagcaacacccccacagtttgtaca 18498529  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
    ||| ||||||||||||||  ||||||||||    
T  18498530 gtggcatcaaaagttcagtcctcatagtat 18498559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 589 - 671
Target Start/End: Original strand, 15443675 - 15443757
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgt 671  Q
    |||||| ||||||||||||||  |||  ||||||||||||||||| | ||| |||||||||||||||| ||||| ||||||||    
T  15443675 gacacgaacactgacacgtcgacatcaataataatttgagaaaataacataattcaatataattatatatgttggtgttgtgt 15443757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 769 - 884
Target Start/End: Complemental strand, 3880123 - 3880011
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||  | ||||||||||||| | |||||||||    ||||  | ||||| ||| ||||| ||||||| ||||||||||||     
T  3880123 ggaaaattctatggtgaagtcacgagaatgacttttctggtgaagttaacat---tatagtatcaaaagtgttgtgagtaacaccctactgtttgtacaa 3880027  T
Q  869 tgacatcaaaagttca 884  Q
    ||||||||||||||||    
T  3880026 tgacatcaaaagttca 3880011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 832 - 897
Target Start/End: Original strand, 15491675 - 15491740
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||| ||| ||||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  15491675 caaaagtgttgtgagtaacaccccactatttgtacagtggcatcaaaagttcagccctcatagtat 15491740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 771 - 885
Target Start/End: Original strand, 6088910 - 6089021
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| ||||||||||| | ||||| ||||||| | |||||||||   |||||  | ||||| ||| ||||| ||| |||||||||||||| ||||    
T  6088910 aaaattctatggtgaagtcatgagaatgatttttctggtgaagttaaca---ctatagtatcaaaagtgttgtgagtaacgccccactgtttgtaaagtg 6089006  T
Q  871 acatcaaaagttcag 885  Q
     ||||||||||||||    
T  6089007 gcatcaaaagttcag 6089021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 771 - 885
Target Start/End: Original strand, 29182165 - 29182276
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    |||||| || ||||||||||| | ||||| |||  |||| |||||||||   ||||| || ||||| ||| ||||| ||||||||||||||| |||||||    
T  29182165 aaaattttatggtgaagtcatgagaatgattttattgatgaagttaaca---ctataacatcaaaagtgttgtgagtaacaccccactgtttatacagtg 29182261  T
Q  871 acatcaaaagttcag 885  Q
     ||||||||||||||    
T  29182262 tcatcaaaagttcag 29182276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 13851716 - 13851787
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||||||||||  | |||||||||||||||||||| |  || |||| | |||||||||||||    
T  13851716 gacacggacactgacacgtcgacaccgctaataatttgagaaaataacgtaattcagtgtaattatatgtgt 13851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 768 - 897
Target Start/End: Original strand, 33618833 - 33618959
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    ||||||||||||||||||||||||   ||  ||||||||| | |||| ||||   ||||  || ||||| ||||||||| | || |||| | |||||||     
T  33618833 tggaaaattctacggtgaagtcatgggaaatacttttctggtgaagtcaaca---ctatcgcatcaaaagtgtagtgagtagcaacccattatttgtacg 33618929  T
Q  868 gtgacatcaaaagttcagctctcatagtat 897  Q
    ||| |||||||||||||| |||||||||||    
T  33618930 gtggcatcaaaagttcagttctcatagtat 33618959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 629 - 671
Target Start/End: Complemental strand, 11424750 - 11424708
Alignment:
Q  629 aaaatcatatagttcaatataattatatgtgttgttgttgtgt 671  Q
    ||||||||||| |||||||||||||||||||||| ||||||||    
T  11424750 aaaatcatataattcaatataattatatgtgttggtgttgtgt 11424708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 586 - 660
Target Start/End: Complemental strand, 20371192 - 20371118
Alignment:
Q  586 ccggacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||| ||||||| ||  | |||||||||||||||||||||| |||  ||||| | |||||||||||    
T  20371192 ccggacacggacattgacacgccgacaccgctaataatttgagaaaatcacataactcaatgtgattatatgtgt 20371118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 614 - 660
Target Start/End: Complemental strand, 30866198 - 30866152
Alignment:
Q  614 cgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||||||||||| ||| |||||| |||||||||||||    
T  30866198 cgctaataatttgagaaaatcacataattcaatgtaattatatgtgt 30866152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 589 - 673
Target Start/End: Original strand, 10294087 - 10294171
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgttg 673  Q
    |||||||| ||||||| | || || |||||||||||||||| ||||  ||| |||||| ||||||||||||| | ||| ||||||    
T  10294087 gacacggatactgacatgccgataccgctaataatttgagataatcgcatatttcaatgtaattatatgtgtcggtgtcgtgttg 10294171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 660
Target Start/End: Complemental strand, 7265668 - 7265601
Alignment:
Q  593 cggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||| |   | |||||||||||||||||||||| ||| |||| | |||||||||||||    
T  7265668 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 7265601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 658
Target Start/End: Complemental strand, 7723303 - 7723260
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatgt 658  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||    
T  7723303 gctaataatttgagaaaatcatataattcagcataattatatgt 7723260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 9027158 - 9027229
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||||||| ||  | |||||||||||||||| ||||| ||| |||  | |||||||||||||    
T  9027158 gacacggacactgacacgccgacaccgctaataatttgagataatcacataattccgtgtaattatatgtgt 9027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 617 - 660
Target Start/End: Original strand, 9617442 - 9617485
Alignment:
Q  617 taataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaattatatgtgt 9617485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 660
Target Start/End: Original strand, 9629363 - 9629434
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||| | ||||||| ||  | ||| |||||||||||||||||| ||| |||||| |||||||||||||    
T  9629363 gacacggatattgacacgccgacaccgccaataatttgagaaaatcacataattcaatgtaattatatgtgt 9629434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 656
Target Start/End: Original strand, 9658859 - 9658926
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatat 656  Q
    |||||||||||||||||| ||  | |||||||||||| ||||||||| ||| |||| | |||||||||    
T  9658859 gacacggacactgacacgccgacaccgctaataatttaagaaaatcacataattcagtgtaattatat 9658926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 7055399 - 7055274
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| || ||||||||||| | ||||| |||| || | |||||||||   ||||| ||  |||| | || | || |||||| |||| |||||| |     
T  7055399 ggaaaattttatggtgaagtcataagaatgatttttttggtgaagttaaca---ctataacataaaaaatataattagtaacacctcactatttgtagaa 7055303  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||| ||||||||||    
T  7055302 tgacatcaaaagttcagccctcatagtat 7055274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 660
Target Start/End: Original strand, 7377984 - 7378030
Alignment:
Q  614 cgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||| ||||||||||||||| ||| |||||| |||||||||||||    
T  7377984 cgctaaaaatttgagaaaatcacataattcaatgtaattatatgtgt 7378030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 657
Target Start/End: Complemental strand, 7996431 - 7996389
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatg 657  Q
    ||||||||||||||||||||||||| |||| | ||||||||||    
T  7996431 gctaataatttgagaaaatcatataattcagtgtaattatatg 7996389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 657
Target Start/End: Original strand, 8022370 - 8022412
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatg 657  Q
    ||||||||||||||||||||||||| |||| | ||||||||||    
T  8022370 gctaataatttgagaaaatcatataattcagtgtaattatatg 8022412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 614 - 660
Target Start/End: Original strand, 19040357 - 19040403
Alignment:
Q  614 cgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||||||||||| ||| |||| | |||||||||||||    
T  19040357 cgctaataatttgagaaaatcacataattcagtgtaattatatgtgt 19040403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 615 - 693
Target Start/End: Original strand, 24138432 - 24138510
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatgtgttgttgttgtgttgaacatgacatatgtctgaca 693  Q
    ||||||||||||| ||||||||||| || | | || |||||||| | | |||||||||| ||||||||  |||||||||    
T  24138432 gctaataatttgaaaaaatcatataattaagtgtatttatatgtatcggtgttgtgttggacatgacacgtgtctgaca 24138510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 647
Target Start/End: Original strand, 2545438 - 2545479
Alignment:
Q  606 gtcgttatcgctaataatttgagaaaatcatatagttcaata 647  Q
    |||| ||||| ||||||||||| |||||||||||||||||||    
T  2545438 gtcgatatcgataataatttgataaaatcatatagttcaata 2545479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 660
Target Start/End: Complemental strand, 9025547 - 9025502
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||||||| ||| |||| | |||||||||||||    
T  9025547 gctaataatttgagaaaatcacataattcagtgtaattatatgtgt 9025502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 619 - 660
Target Start/End: Complemental strand, 17411917 - 17411876
Alignment:
Q  619 ataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||| ||||||||||||| |||| |||||||||||||||    
T  17411917 ataatttaagaaaatcatataattcagtataattatatgtgt 17411876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 4e-22; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 19089664 - 19089539
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||| |||||| |||| |||||||||   |||||  | |||||||||| |||| |||||||||||||||||| |     
T  19089664 ggaaaattctatggtgaagtcataagaataacttttttgatgaagttaaca---ctataatatcaaaattgtaatgagtaacaccccactgtttgtataa 19089568  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||  ||||||||||    
T  19089567 tgacatcaaaagttcagtcctcatagtat 19089539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 25701268 - 25701143
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||||| || ||||||||||| | |||||||||| || | |||||||||    |||| || ||||| ||||||||| ||||||| |||||||||||||    
T  25701268 ggaaaattttatggtgaagtcatgataatgacttttttggtaaagttaacat---tataacatcaaaagtgtagtgagtaacaccctactgtttgtacag 25701172  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||  ||||||||||    
T  25701171 tgacatcaaaagttcagtcctcatagtat 25701143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 768 - 885
Target Start/End: Original strand, 39397917 - 39398031
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| | |||||||||| || | |||||||||   ||||| ||  |||| ||| ||||| ||||||||| ||||||||||    
T  39397917 tggaaaattctatggtgaagtcattagaatgacttttatggtgaagttaaca---ctataacattaaaagtgttgtgagtaacaccccattgtttgtaca 39398013  T
Q  868 gtgacatcaaaagttcag 885  Q
    ||||||||||||||||||    
T  39398014 gtgacatcaaaagttcag 39398031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 768 - 885
Target Start/End: Complemental strand, 55241316 - 55241202
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| | ||||||||||||  | ||||||| |   |||||| | ||||||||| | ||| ||||||||||||||||||||    
T  55241316 tggaaaattctatggtgaagtcatgagaatgacttttctagtgaagttaata---ctatattatcaaaattgttgcgagtaacaccccactgtttgtaca 55241220  T
Q  868 gtgacatcaaaagttcag 885  Q
    ||| ||||||||||||||    
T  55241219 gtggcatcaaaagttcag 55241202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 30002835 - 30002722
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    |||||| |||| ||||||||||| ||||||| ||||||| | |||||||||   || || || ||||| ||| ||||| |||||| ||||||||||||||    
T  30002835 ggaaaactctatggtgaagtcattaaaatgatttttctggtgaagttaaca---ctgtagcatcaaaagtgttgtgagtaacacctcactgtttgtacag 30002739  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  30002738 tgacatcaaaagttcag 30002722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 766 - 885
Target Start/End: Original strand, 7703514 - 7703630
Alignment:
Q  766 tttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgta 865  Q
    |||||||||||||| | | ||||||| | ||||||||||||| | |||||||||   ||||| || ||||| ||| || || ||||||||||||||||||    
T  7703514 tttggaaaattctatgttaaagtcatgagaatgacttttctggtgaagttaaca---ctataacatcaaaagtgttgtcagtaacaccccactgtttgta 7703610  T
Q  866 cagtgacatcaaaagttcag 885  Q
    | ||||||||||||||||||    
T  7703611 cggtgacatcaaaagttcag 7703630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 771 - 885
Target Start/End: Complemental strand, 36493897 - 36493786
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| ||||||||||| ||||| |||||| || | ||||||| |   ||||| || ||||| | ||||||| ||||||||| |||||||||||||    
T  36493897 aaaattctatggtgaagtcatgaaaataacttttttggtgaagttaata---ctataccatcaaaaatatagtgagtaacaccccattgtttgtacagtg 36493801  T
Q  871 acatcaaaagttcag 885  Q
    |||||||||||||||    
T  36493800 acatcaaaagttcag 36493786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 37663950 - 37663827
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | |||||||||| |||| |||||||||      || ||  |||| |||| |||| ||||||||||||||||||||     
T  37663950 ggaaaattctatggtgaagtcataagaatgacttttttgatgaagttaacac-----taacattaaaactgtaatgagtaacaccccactgtttgtacaa 37663856  T
Q  869 tgacatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||||  ||||||||||    
T  37663855 tgacatcaaaagttcagtcctcatagtat 37663827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 771 - 897
Target Start/End: Original strand, 47253751 - 47253873
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| ||||||||||| | |||||||||| || | |||||||||   |||||||| ||||| ||| ||||| ||||||| | ||||| |||||||    
T  47253751 aaaattctatggtgaagtcatgagaatgacttttttggtgaagttaaca---ctatatcatcaaaagtgttgtgagtaacaccc-attgtttatacagtg 47253846  T
Q  871 acatcaaaagttcagctctcatagtat 897  Q
    |||||||||||||||  ||||||||||    
T  47253847 acatcaaaagttcagtcctcatagtat 47253873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 768 - 885
Target Start/End: Original strand, 49375965 - 49376080
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgactttt-ctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac 866  Q
    |||||||||||||||||||||||| | |||||||||| ||| | |||||||||    |||| || ||||| ||| ||||| |||||||||||| ||||||    
T  49375965 tggaaaattctacggtgaagtcatgagaatgactttttctggtgaagttaacat---tatagcatcaaaagtgtcgtgagtaacaccccactgcttgtac 49376061  T
Q  867 agtgacatcaaaagttcag 885  Q
    |||| ||||||||||||||    
T  49376062 agtggcatcaaaagttcag 49376080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 771 - 884
Target Start/End: Original strand, 17167715 - 17167825
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| |||||||| |  ||||||||||||||||| |||||||||  |  ||||||| ||   ||| ||||| |||||||||||||||||||| ||    
T  17167715 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaa---tgttgtgagtaacaccccactgtttgtacaatg 17167811  T
Q  871 acatcaaaagttca 884  Q
    ||||||||||||||    
T  17167812 acatcaaaagttca 17167825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 771 - 884
Target Start/End: Original strand, 17173292 - 17173402
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    ||||||||| |||||||| |  ||||||||||||||||| |||||||||  |  ||||||| ||   ||| ||||| |||||||||||||||||||| ||    
T  17173292 aaaattctatggtgaagttacgaaaatgacttttctgatgaagttaacattataatatcaaaaa---tgttgtgagtaacaccccactgtttgtacaatg 17173388  T
Q  871 acatcaaaagttca 884  Q
    ||||||||||||||    
T  17173389 acatcaaaagttca 17173402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 768 - 885
Target Start/End: Complemental strand, 28003198 - 28003084
Alignment:
Q  768 tggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    |||||||||||| ||||||||||| | ||||||||||||| | |||| ||||   ||||| || ||||| |||||| || |  || ||||||||||||||    
T  28003198 tggaaaattctatggtgaagtcatgagaatgacttttctggtgaagtcaaca---ctatagcatcaaaagtgtagtcagtagtactccactgtttgtaca 28003102  T
Q  868 gtgacatcaaaagttcag 885  Q
    ||||||||||||||||||    
T  28003101 gtgacatcaaaagttcag 28003084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 769 - 882
Target Start/End: Complemental strand, 35021246 - 35021136
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| ||||||||||||||| | |||||||   || |||| || ||||| ||||||||| ||||| ||||||||||||||     
T  35021246 ggaaaattctatggtgaagtcatgaaaatgacttttctggtgaagttaa---cattataacatcaaaaatgtagtgagtaacacaccactgtttgtacat 35021150  T
Q  869 tgacatcaaaagtt 882  Q
    || | |||||||||    
T  35021149 tggcgtcaaaagtt 35021136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 770 - 883
Target Start/End: Original strand, 37775670 - 37775780
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    |||||||||||||||||||||| ||||||| |||| || | ||||||   ||||||||  |  |||| ||| ||||| ||||||||||||||||||||||    
T  37775670 gaaaattctacggtgaagtcattaaaatgatttttttggtgaagtta---gcactataatattaaaaatgttgtgagtaacaccccactgtttgtacagt 37775766  T
Q  870 gacatcaaaagttc 883  Q
    | ||||||||||||    
T  37775767 ggcatcaaaagttc 37775780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 770 - 885
Target Start/End: Original strand, 4597994 - 4598105
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagt 869  Q
    ||||||| || ||||||||||| | ||||||||||||| | |||||||||   ||||| || |||| | || ||||| ||||||||||||||||||||||    
T  4597994 gaaaattttatggtgaagtcattagaatgacttttctggtgaagttaaca---ctataacatcaaagt-gttgtgagtaacaccccactgtttgtacagt 4598089  T
Q  870 gacatcaaaagttcag 885  Q
    | ||||||||||||||    
T  4598090 ggcatcaaaagttcag 4598105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 771 - 885
Target Start/End: Complemental strand, 34948306 - 34948195
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtg 870  Q
    |||||| || ||||||||||| | |||||||||||||   |||||||||   ||||| || ||||| ||| ||||| |||||||||||||||||| ||||    
T  34948306 aaaattttatggtgaagtcatgagaatgacttttctggcgaagttaaca---ctataacatcaaaagtgttgtgagtaacaccccactgtttgtaaagtg 34948210  T
Q  871 acatcaaaagttcag 885  Q
     ||||||||||||||    
T  34948209 gcatcaaaagttcag 34948195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 769 - 886
Target Start/End: Complemental strand, 34361702 - 34361588
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | |||||||||| || | |||||||||   ||||| ||  |||| |||| |||| |||||||||||||||||| |     
T  34361702 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaaca---ctataacataaaaaatgtaatgagtaacaccccactgtttgtagaa 34361606  T
Q  869 tgacatcaaaagttcagc 886  Q
    |||||| |||||||||||    
T  34361605 tgacattaaaagttcagc 34361588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 877
Target Start/End: Original strand, 4205116 - 4205221
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||  ||||||||||||||||| |||||||   |||||||  | ||||| |||  |||  ||||||||||||||||||||     
T  4205116 ggaaaattctatggtgaagtcaggaaaatgacttttctgatgaagttaa---cactataatatcaaaaatgttctgaataacaccccactgtttgtacaa 4205212  T
Q  869 tgacatcaa 877  Q
    |||||||||    
T  4205213 tgacatcaa 4205221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 35025799 - 35025686
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| | ||||||||| ||||||| ||||||| | |||| ||||   ||||| || ||||| ||||||||| | ||||||||||||| |||      
T  35025799 ggaaaattctatgctgaagtcatgaaaatgatttttctggtgaagtcaaca---ctatagcatcaaaagtgtagtgagtagcaccccactgtttatacgt 35025703  T
Q  869 tgacatcaaaagttcag 885  Q
    |||||||||||||||||    
T  35025702 tgacatcaaaagttcag 35025686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 884
Target Start/End: Original strand, 37287733 - 37287846
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttct-gattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtaca 867  Q
    ||||||||||| |||||||| || | |||||||||| | | | |||||||||   ||||| || ||||| ||| ||||| ||||||||||||||||||||    
T  37287733 ggaaaattctatggtgaagtaatgagaatgactttttttggtaaagttaaca---ctataacatcaaaagtgttgtgagtaacaccccactgtttgtaca 37287829  T
Q  868 gtgacatcaaaagttca 884  Q
    ||| |||||||||||||    
T  37287830 gtggcatcaaaagttca 37287846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 769 - 885
Target Start/End: Original strand, 38011854 - 38011967
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| |||||| |||| | ||||||||||||| | |||| ||||   ||||| || ||||| ||||||||  | ||||||||||||||||| |    
T  38011854 ggaaaattctatggtgaaatcatgagaatgacttttctggtgaagtcaaca---ctataacatcaaaagtgtagtgaatagcaccccactgtttgtacgg 38011950  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  38011951 tgccatcaaaagttcag 38011967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 783 - 885
Target Start/End: Complemental strand, 46888354 - 46888255
Alignment:
Q  783 tgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagtt 882  Q
    ||||||||  ||||| ||||||||||| ||||||| |   ||||| || ||||||||||||||| || |||||||| ||||||||| | |||||||||||    
T  46888354 tgaagtcaagaaaataacttttctgatgaagttaata---ctataacatcaaaattgtagtgagtaataccccactatttgtacagcggcatcaaaagtt 46888258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 769 - 893
Target Start/End: Complemental strand, 32912791 - 32912670
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | |||||||||| || | |||||||   ||||||| || ||||| |||| |||| ||||||| | | |||||| |     
T  32912791 ggaaaattctatggtgaagtcataagaatgacttttttggtgaagttaa---cactataacatcaaaaatgtaatgagtaacaccctagtatttgtagaa 32912695  T
Q  869 tgacatcaaaagttcagctctcata 893  Q
    ||| |||||||||||||| ||||||    
T  32912694 tgatatcaaaagttcagcactcata 32912670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 769 - 884
Target Start/End: Original strand, 25184113 - 25184225
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||||| | ||||||| || || | |||||||||   ||||| || ||||| |||| |||| ||||| | ||||||||||||     
T  25184113 ggaaaattctatggtgaagtcatgagaatgactattttggtgaagttaaca---ctataacatcaaaaatgtaatgagtaacactctactgtttgtacaa 25184209  T
Q  869 tgacatcaaaagttca 884  Q
    ||||||| ||||||||    
T  25184210 tgacatccaaagttca 25184225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 832 - 897
Target Start/End: Original strand, 50764790 - 50764855
Alignment:
Q  832 caaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcagctctcatagtat 897  Q
    ||||| ||| ||||| ||||||||||||||||||| |||||||||||||||||   ||||||||||    
T  50764790 caaaagtgttgtgagtaacaccccactgtttgtacggtgacatcaaaagttcaatcctcatagtat 50764855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 821 - 885
Target Start/End: Original strand, 23761121 - 23761185
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagttcag 885  Q
    ||||||| || ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||    
T  23761121 cactataacatcaaaagtgttgtgagtaacacctcactgtttgtatagtgacatcaaaagttcag 23761185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 769 - 885
Target Start/End: Complemental strand, 29584409 - 29584298
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacag 868  Q
    ||||||||||| ||||||||| |   ||||||||||||| | |||||||||   ||||| || ||||| |||  |||| |||||| |||||||||||||     
T  29584409 ggaaaattctatggtgaagtcgtgggaatgacttttctggtgaagttaaca---ctataacatcaaaagtgt--tgagtaacacctcactgtttgtacaa 29584315  T
Q  869 tgacatcaaaagttcag 885  Q
    || ||||||||||||||    
T  29584314 tggcatcaaaagttcag 29584298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 771 - 885
Target Start/End: Original strand, 33341397 - 33341512
Alignment:
Q  771 aaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattg----tagtgagcaacaccccactgtttgtac 866  Q
    |||||||||  |||||||||| | ||||| ||||||| | || ||||||   |||||||| ||||||||    | | ||| |||||||||||||||||||    
T  33341397 aaaattctatagtgaagtcatgagaatgatttttctggtgaaattaaca---ctatatcatcaaaattgattgttgcgaggaacaccccactgtttgtac 33341493  T
Q  867 agtgacatcaaaagttcag 885  Q
    |||| ||||||||||||||    
T  33341494 agtggcatcaaaagttcag 33341512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 589 - 660
Target Start/End: Complemental strand, 44081656 - 44081585
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||| ||||||||||||  || ||||| ||||||||||| ||||||||||| || ||| |||||||||||||    
T  44081656 gacaaggacactgacacaccgatatcgttaataatttgaaaaaatcatataatttaatgtaattatatgtgt 44081585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 614 - 660
Target Start/End: Complemental strand, 3712563 - 3712517
Alignment:
Q  614 cgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    ||||||||||||||||||||||| || |||||| |||||||||||||    
T  3712563 cgctaataatttgagaaaatcatgtaattcaatgtaattatatgtgt 3712517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 782 - 885
Target Start/End: Original strand, 32592106 - 32592206
Alignment:
Q  782 gtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagt 881  Q
    |||||||||| | |||||||||| |||| |||||||||  ||  ||||||   || ||| | ||| ||||| |||||||||||| |||||||||||||||    
T  32592106 gtgaagtcattataatgacttttttgatgaagttaacactacagtatcaa---aagtgttgagagtaacactccactgtttgtatagtgacatcaaaagt 32592202  T
Q  882 tcag 885  Q
    ||||    
T  32592203 tcag 32592206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 795 - 885
Target Start/End: Complemental strand, 54499424 - 54499336
Alignment:
Q  795 aatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtac-agtgacatcaaaagttcag 885  Q
    ||||||||||||| | |||||||||   ||||| || ||||| ||| ||||| |||||||||| |||||||| | |||||||||||||||||    
T  54499424 aatgacttttctggtgaagttaaca---ctatagcatcaaaagtgttgtgagtaacaccccaccgtttgtactaatgacatcaaaagttcag 54499336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 769 - 897
Target Start/End: Complemental strand, 55478106 - 55477977
Alignment:
Q  769 ggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgt---- 864  Q
    ||||||||||| ||||||||||| | ||||| |||| || | |||||||||   ||||| || ||||| ||||  ||| ||||| |||||||||||        
T  55478106 ggaaaattctatggtgaagtcatgagaatgatttttttggtgaagttaaca---ctataacatcaaaaatgtaacgagtaacactccactgtttgtttgt 55478010  T
Q  865 acagtgacatcaaaagttcagctctcatagtat 897  Q
    ||| |||||||||||||||||  ||||||||||    
T  55478009 acaatgacatcaaaagttcagtcctcatagtat 55477977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 840 - 884
Target Start/End: Original strand, 9139313 - 9139357
Alignment:
Q  840 tagtgagcaacaccccactgtttgtacagtgacatcaaaagttca 884  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||    
T  9139313 tagtgagtaacaccccaccgtttgtacagtgacataaaaagttca 9139357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 770 - 818
Target Start/End: Original strand, 51204580 - 51204628
Alignment:
Q  770 gaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaac 818  Q
    |||||||||| ||||||||||| ||||||||||||||| | ||||||||    
T  51204580 gaaaattctatggtgaagtcataaaaatgacttttctggtgaagttaac 51204628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 660
Target Start/End: Complemental strand, 26504378 - 26504307
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaatataattatatgtgt 660  Q
    |||||||||||||| || |||  |  ||||||||||| ||||||||| |||||||| | |||||||||||||    
T  26504378 gacacggacactgaaacatcgacactgctaataatttaagaaaatcaaatagttcagtgtaattatatgtgt 26504307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 658
Target Start/End: Complemental strand, 35952670 - 35952627
Alignment:
Q  615 gctaataatttgagaaaatcatatagttcaatataattatatgt 658  Q
    ||||||||||||| ||||||||||| |||||| |||||||||||    
T  35952670 gctaataatttgataaaatcatataattcaatgtaattatatgt 35952627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 595 - 660
Target Start/End: Complemental strand, 35723458 - 35723392
Alignment:
Q  595 gacactgacacgtcgttatcgctaataatttgagaaaat-catatagttcaatataattatatgtgt 660  Q
    |||||||||||| ||  | |||||||||||||||||||| || ||| |||||| |||||||||||||    
T  35723458 gacactgacacgccgacaccgctaataatttgagaaaatacacataattcaatgtaattatatgtgt 35723392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 821 - 882
Target Start/End: Complemental strand, 879710 - 879649
Alignment:
Q  821 cactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagtt 882  Q
    ||||||| || ||||| |||| |||| |||||| || |||||||||| ||||||||||||||    
T  879710 cactataacatcaaaaatgtaatgagtaacacctcattgtttgtacaatgacatcaaaagtt 879649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 589 - 646
Target Start/End: Complemental strand, 20521928 - 20521871
Alignment:
Q  589 gacacggacactgacacgtcgttatcgctaataatttgagaaaatcatatagttcaat 646  Q
    |||||||||||||||||| || || || ||||||||||| ||||||| ||| ||||||    
T  20521928 gacacggacactgacacgccgataccgataataatttgataaaatcacataattcaat 20521871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 616 - 661
Target Start/End: Original strand, 36635331 - 36635376
Alignment:
Q  616 ctaataatttgagaaaatcatatagttcaatataattatatgtgtt 661  Q
    |||||||||||||||||||| ||| |||| | ||||||||||||||    
T  36635331 ctaataatttgagaaaatcacataattcagtgtaattatatgtgtt 36635376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 52; Significance: 3e-20; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 793 - 882
Target Start/End: Complemental strand, 94544 - 94458
Alignment:
Q  793 aaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttgtacagtgacatcaaaagtt 882  Q
    ||||||||||||||||| |||||||||    |||| || ||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  94544 aaaatgacttttctgatgaagttaacat---tataacatcaaaattgtagtgagtaacaccccactgtttgtacagtggcatcaaaagtt 94458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 764 - 897
Target Start/End: Original strand, 129 - 259
Alignment:
Q  764 tttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttg 863  Q
    |||| ||||||||||| ||||||||||  ||||||||||||||| | |||||||||   || ||  |  |||| ||| ||||| ||||| ||||||||||    
T  129 ttttaggaaaattctatggtgaagtcacgaaaatgacttttctggtgaagttaaca---ctgtagtataaaaaatgttgtgagtaacactccactgtttg 225  T
Q  864 tacagtgacatcaaaagttcagctctcatagtat 897  Q
    |||| || ||||||||||||||  ||||||||||    
T  226 tacaatggcatcaaaagttcagtcctcatagtat 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 764 - 897
Target Start/End: Complemental strand, 146206 - 146076
Alignment:
Q  764 tttttggaaaattctacggtgaagtcatcaaaatgacttttctgattaagttaacagcactatatcaacaaaattgtagtgagcaacaccccactgtttg 863  Q
    |||||| ||||||||||||||||||||| | ||||| |||| || |||||||||||    |||| ||  |||| |||| |||| ||||||||| | ||||    
T  146206 tttttgaaaaattctacggtgaagtcataagaatgatttttttggttaagttaacat---tataacataaaaaatgtaatgagtaacaccccattatttg 146110  T
Q  864 tacagtgacatcaaaagttcagctctcatagtat 897  Q
    || | ||||||||||||||||||  |||||||||    
T  146109 tagaatgacatcaaaagttcagccttcatagtat 146076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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