View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0856_low_209 (Length: 251)
Name: NF0856_low_209
Description: NF0856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0856_low_209 |
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Alignment Details
Target: chr8 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 33659801 - 33660041
Alignment:
| Q |
2 |
aacagactagtgcctagcatccttcatccataatttaatatatattgttcaatgattttccaatttctatgctttcccatgttaaagtcaaataattata |
101 |
Q |
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| T |
33659801 |
aacagactagtgcctagcatccttcatccataatttaatatatattgttcaatgattttccaatttctatgctttcccatgttaaagtcaaataattata |
33659900 |
T |
|
| Q |
102 |
tcatgcacatgtatacgaacatcattctcaaaacaaagttttgtgcttcaactttcattccaaataatgtgctagtgttctcccaaggcatgaaaacgca |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
33659901 |
tcatgcacatgtatacgaacatcattctcaaaacaaagttttgtgcttcaactttcattccaaataatgtgctagtgttctcccacggcatgaaaacgca |
33660000 |
T |
|
| Q |
202 |
atttttccacataaatgtcaagcttaaaatatctcctatgc |
242 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
33660001 |
atttttccacataaatgtcaagcttaaaatatctcctatgc |
33660041 |
T |
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