View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0857_high_85 (Length: 251)

Name: NF0857_high_85
Description: NF0857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0857_high_85
NF0857_high_85
[»] chr8 (50 HSPs)
chr8 (67-243)||(24998939-24999115)
chr8 (1-58)||(17110866-17110923)
chr8 (1-57)||(23011732-23011788)
chr8 (1-57)||(42711385-42711441)
chr8 (12-55)||(3853616-3853659)
chr8 (12-55)||(3858074-3858117)
chr8 (12-59)||(36103097-36103144)
chr8 (1-59)||(33377326-33377384)
chr8 (1-55)||(33902667-33902721)
chr8 (1-59)||(40046800-40046858)
chr8 (12-57)||(14991690-14991735)
chr8 (12-57)||(27322689-27322734)
chr8 (20-59)||(14799975-14800014)
chr8 (12-55)||(24044960-24045003)
chr8 (12-55)||(28324702-28324745)
chr8 (12-55)||(29257391-29257434)
chr8 (1-52)||(35979033-35979084)
chr8 (1-55)||(14800065-14800119)
chr8 (1-55)||(17110974-17111028)
chr8 (12-58)||(32626074-32626120)
chr8 (1-55)||(44889354-44889408)
chr8 (1-53)||(4156272-4156324)
chr8 (1-53)||(29482836-29482888)
chr8 (12-59)||(14235-14281)
chr8 (12-55)||(515572-515615)
chr8 (20-55)||(29611388-29611423)
chr8 (20-55)||(34008799-34008834)
chr8 (12-51)||(44346718-44346757)
chr8 (1-51)||(30435250-30435300)
chr8 (20-58)||(30444963-30445001)
chr8 (12-58)||(33986001-33986047)
chr8 (1-55)||(37268112-37268166)
chr8 (20-57)||(42739947-42739984)
chr8 (1-53)||(3853721-3853773)
chr8 (1-53)||(3858179-3858231)
chr8 (1-53)||(13404829-13404881)
chr8 (1-45)||(13404932-13404976)
chr8 (20-55)||(7202934-7202969)
chr8 (20-55)||(30435350-30435385)
chr8 (1-55)||(31807409-31807462)
chr8 (1-59)||(33902772-33902829)
chr8 (12-57)||(1088317-1088362)
chr8 (20-57)||(7202863-7202900)
chr8 (12-57)||(11744759-11744804)
chr8 (25-54)||(34388527-34388556)
chr8 (20-56)||(8469514-8469550)
chr8 (1-49)||(8689138-8689186)
chr8 (20-52)||(26520469-26520501)
chr8 (15-59)||(28190745-28190789)
chr8 (31-59)||(38573517-38573545)
[»] chr2 (43 HSPs)
chr2 (1-58)||(10480116-10480173)
chr2 (1-57)||(14365698-14365754)
chr2 (1-55)||(41461620-41461674)
chr2 (1-58)||(11684596-11684653)
chr2 (1-53)||(11793897-11793949)
chr2 (12-56)||(14537198-14537242)
chr2 (1-57)||(17180295-17180351)
chr2 (1-57)||(27033488-27033544)
chr2 (1-55)||(14365804-14365858)
chr2 (12-58)||(33189287-33189333)
chr2 (12-57)||(769034-769079)
chr2 (12-57)||(11141303-11141348)
chr2 (12-55)||(1583839-1583882)
chr2 (1-55)||(784898-784952)
chr2 (1-55)||(8735844-8735898)
chr2 (1-55)||(11716408-11716462)
chr2 (1-47)||(11716504-11716550)
chr2 (12-57)||(7228042-7228087)
chr2 (1-53)||(11532272-11532324)
chr2 (20-59)||(3345759-3345798)
chr2 (20-55)||(14537305-14537340)
chr2 (20-59)||(19231305-19231344)
chr2 (1-52)||(28740599-28740650)
chr2 (12-47)||(30698289-30698324)
chr2 (12-55)||(35047709-35047752)
chr2 (12-58)||(784790-784836)
chr2 (12-58)||(3092279-3092325)
chr2 (12-58)||(17905651-17905697)
chr2 (1-55)||(45094490-45094544)
chr2 (20-57)||(11684696-11684733)
chr2 (20-53)||(11824786-11824819)
chr2 (1-58)||(41461512-41461569)
chr2 (15-55)||(13017779-13017819)
chr2 (1-57)||(39630223-39630279)
chr2 (20-55)||(8736461-8736496)
chr2 (20-59)||(11595333-11595372)
chr2 (20-55)||(21504468-21504503)
chr2 (1-55)||(10244177-10244231)
chr2 (15-57)||(14954264-14954306)
chr2 (20-58)||(41585710-41585748)
chr2 (20-53)||(11607241-11607274)
chr2 (20-53)||(44205678-44205711)
chr2 (1-53)||(44256212-44256263)
[»] chr7 (41 HSPs)
chr7 (1-58)||(31632719-31632776)
chr7 (1-55)||(26162142-26162196)
chr7 (1-58)||(35776960-35777017)
chr7 (1-58)||(43955514-43955571)
chr7 (1-57)||(40110735-40110791)
chr7 (1-58)||(2057392-2057449)
chr7 (1-53)||(43955619-43955671)
chr7 (12-55)||(34398965-34399008)
chr7 (1-55)||(6498770-6498824)
chr7 (12-58)||(14603278-14603324)
chr7 (1-55)||(28539173-28539227)
chr7 (1-59)||(40110843-40110901)
chr7 (1-58)||(5644674-5644731)
chr7 (12-57)||(39342658-39342703)
chr7 (1-57)||(29065817-29065873)
chr7 (1-57)||(29639220-29639276)
chr7 (12-55)||(35455804-35455847)
chr7 (1-55)||(2057500-2057554)
chr7 (1-55)||(5644782-5644836)
chr7 (1-54)||(9784936-9784989)
chr7 (20-57)||(31913234-31913271)
chr7 (1-57)||(25189231-25189287)
chr7 (15-59)||(40854089-40854133)
chr7 (12-55)||(23548627-23548670)
chr7 (24-59)||(30080811-30080846)
chr7 (12-51)||(30629061-30629100)
chr7 (20-55)||(40853987-40854022)
chr7 (1-55)||(18789251-18789305)
chr7 (1-51)||(23455252-23455302)
chr7 (1-55)||(29065924-29065978)
chr7 (20-54)||(30587909-30587943)
chr7 (12-49)||(21636001-21636038)
chr7 (12-57)||(29195707-29195752)
chr7 (1-57)||(30524253-30524309)
chr7 (20-55)||(13815000-13815035)
chr7 (24-55)||(31913309-31913340)
chr7 (12-58)||(34388262-34388308)
chr7 (1-55)||(34388370-34388424)
chr7 (12-58)||(44915192-44915238)
chr7 (12-57)||(21635883-21635928)
chr7 (17-57)||(42816553-42816593)
[»] chr5 (49 HSPs)
chr5 (1-59)||(40643922-40643980)
chr5 (1-58)||(25935306-25935363)
chr5 (1-57)||(15374065-15374121)
chr5 (1-51)||(9894338-9894388)
chr5 (1-57)||(2316376-2316432)
chr5 (1-53)||(2721576-2721628)
chr5 (1-53)||(19533923-19533975)
chr5 (1-53)||(28828369-28828421)
chr5 (12-55)||(22303897-22303940)
chr5 (12-59)||(41762242-41762289)
chr5 (1-55)||(9764443-9764497)
chr5 (1-55)||(15804322-15804376)
chr5 (1-55)||(22766952-22767006)
chr5 (1-55)||(26281285-26281339)
chr5 (1-55)||(37722910-37722964)
chr5 (12-58)||(40090441-40090487)
chr5 (1-58)||(927299-927356)
chr5 (1-54)||(3563278-3563331)
chr5 (1-58)||(9764335-9764392)
chr5 (1-54)||(20523238-20523291)
chr5 (1-53)||(15804399-15804451)
chr5 (1-53)||(37145517-37145569)
chr5 (20-59)||(2550324-2550363)
chr5 (12-59)||(5658772-5658819)
chr5 (12-59)||(33245399-33245446)
chr5 (1-55)||(20523133-20523187)
chr5 (20-58)||(22305109-22305147)
chr5 (17-59)||(34982212-34982254)
chr5 (1-59)||(40809337-40809395)
chr5 (1-58)||(6634012-6634069)
chr5 (1-59)||(13243453-13243513)
chr5 (1-58)||(16515123-16515180)
chr5 (12-57)||(23092078-23092123)
chr5 (1-57)||(32250114-32250169)
chr5 (12-59)||(32470878-32470925)
chr5 (20-55)||(33146061-33146096)
chr5 (20-55)||(33146191-33146226)
chr5 (1-55)||(15373960-15374014)
chr5 (12-53)||(13243520-13243561)
chr5 (20-57)||(15270871-15270908)
chr5 (1-58)||(32390077-32390134)
chr5 (1-53)||(28828452-28828504)
chr5 (1-53)||(32389974-32390026)
chr5 (20-55)||(22302539-22302574)
chr5 (20-55)||(34982313-34982348)
chr5 (12-55)||(40809457-40809500)
chr5 (20-54)||(12064485-12064519)
chr5 (1-55)||(35379344-35379397)
chr5 (12-53)||(14834826-14834867)
[»] chr4 (45 HSPs)
chr4 (1-59)||(1112601-1112659)
chr4 (1-55)||(31473849-31473903)
chr4 (1-52)||(10633035-10633086)
chr4 (1-59)||(7352917-7352975)
chr4 (1-55)||(49111417-49111471)
chr4 (1-55)||(857344-857398)
chr4 (1-55)||(14982280-14982334)
chr4 (1-55)||(15660288-15660342)
chr4 (1-55)||(36455907-36455961)
chr4 (1-54)||(4441338-4441391)
chr4 (12-53)||(7352814-7352855)
chr4 (1-50)||(28845876-28845925)
chr4 (12-56)||(31742880-31742924)
chr4 (12-55)||(16516171-16516214)
chr4 (15-58)||(36456045-36456088)
chr4 (1-55)||(2125857-2125911)
chr4 (1-55)||(4896648-4896702)
chr4 (1-55)||(10128079-10128133)
chr4 (1-55)||(11348342-11348396)
chr4 (1-55)||(28845976-28846030)
chr4 (1-58)||(4896737-4896794)
chr4 (1-58)||(15660180-15660237)
chr4 (1-57)||(31947588-31947647)
chr4 (12-57)||(41498606-41498651)
chr4 (12-53)||(42542983-42543024)
chr4 (20-55)||(26251015-26251050)
chr4 (1-55)||(1107157-1107211)
chr4 (1-55)||(1112727-1112781)
chr4 (1-47)||(1539649-1539695)
chr4 (15-57)||(42844541-42844583)
chr4 (20-57)||(14982385-14982422)
chr4 (20-53)||(42775625-42775658)
chr4 (12-55)||(5715744-5715787)
chr4 (12-55)||(11040968-11041010)
chr4 (12-59)||(26250905-26250952)
chr4 (20-55)||(47108318-47108353)
chr4 (20-55)||(53760810-53760845)
chr4 (24-54)||(4441438-4441468)
chr4 (1-55)||(35470122-35470176)
chr4 (3-53)||(42844650-42844700)
chr4 (12-53)||(10127976-10128017)
chr4 (20-57)||(21012596-21012633)
chr4 (20-53)||(46243115-46243148)
chr4 (20-53)||(52295065-52295098)
chr4 (12-57)||(52493924-52493968)
[»] chr3 (44 HSPs)
chr3 (1-59)||(49457339-49457397)
chr3 (12-59)||(42005982-42006029)
chr3 (12-59)||(44436254-44436301)
chr3 (1-59)||(27251999-27252057)
chr3 (1-59)||(44692927-44692985)
chr3 (1-55)||(46672821-46672875)
chr3 (1-57)||(9129449-9129505)
chr3 (1-57)||(9137556-9137612)
chr3 (12-59)||(35279931-35279978)
chr3 (12-55)||(47767432-47767475)
chr3 (1-55)||(36398007-36398061)
chr3 (1-55)||(44692822-44692876)
chr3 (1-58)||(46001361-46001418)
chr3 (1-56)||(5415782-5415837)
chr3 (12-55)||(37054394-37054437)
chr3 (1-51)||(21307550-21307600)
chr3 (12-58)||(53129872-53129918)
chr3 (1-58)||(671637-671694)
chr3 (12-57)||(7302344-7302389)
chr3 (1-58)||(34088568-34088625)
chr3 (12-55)||(5415899-5415942)
chr3 (20-55)||(46429414-46429449)
chr3 (1-47)||(19475824-19475870)
chr3 (1-55)||(28092214-28092268)
chr3 (1-55)||(30767104-30767158)
chr3 (12-57)||(9129342-9129387)
chr3 (12-57)||(9137449-9137494)
chr3 (20-53)||(27485474-27485507)
chr3 (20-57)||(37321622-37321659)
chr3 (11-52)||(52527039-52527080)
chr3 (20-57)||(54761583-54761620)
chr3 (12-55)||(2732639-2732682)
chr3 (26-57)||(9007480-9007511)
chr3 (20-55)||(25655315-25655350)
chr3 (12-55)||(46429512-46429555)
chr3 (12-55)||(48947605-48947648)
chr3 (20-58)||(25655403-25655441)
chr3 (20-58)||(28092320-28092358)
chr3 (1-39)||(31070422-31070460)
chr3 (1-59)||(42130688-42130746)
chr3 (1-55)||(47284331-47284385)
chr3 (1-55)||(53470447-53470501)
chr3 (20-57)||(332081-332118)
chr3 (20-57)||(2104750-2104787)
[»] chr1 (49 HSPs)
chr1 (1-55)||(24273239-24273293)
chr1 (1-57)||(23536065-23536121)
chr1 (1-59)||(8224764-8224822)
chr1 (1-55)||(15034764-15034818)
chr1 (1-58)||(49659214-49659270)
chr1 (1-57)||(4038073-4038129)
chr1 (1-57)||(15034657-15034713)
chr1 (1-57)||(26501098-26501154)
chr1 (12-55)||(30190252-30190295)
chr1 (12-59)||(43623008-43623055)
chr1 (1-55)||(34756427-34756481)
chr1 (15-58)||(5474414-5474457)
chr1 (20-59)||(15245456-15245495)
chr1 (1-52)||(45565397-45565448)
chr1 (1-55)||(4038180-4038234)
chr1 (1-55)||(6470705-6470759)
chr1 (1-51)||(27804269-27804319)
chr1 (1-59)||(29446746-29446804)
chr1 (12-57)||(27804381-27804426)
chr1 (12-56)||(32287963-32288007)
chr1 (1-53)||(40264135-40264187)
chr1 (12-59)||(27935601-27935648)
chr1 (12-59)||(28632615-28632662)
chr1 (20-55)||(32572940-32572975)
chr1 (1-52)||(37036968-37037019)
chr1 (20-59)||(41823180-41823219)
chr1 (12-55)||(44410311-44410354)
chr1 (12-58)||(38277412-38277458)
chr1 (1-55)||(47165231-47165285)
chr1 (20-58)||(50471765-50471803)
chr1 (12-57)||(31166308-31166353)
chr1 (1-54)||(32573027-32573080)
chr1 (20-57)||(40264046-40264083)
chr1 (1-58)||(44410416-44410473)
chr1 (1-53)||(28745799-28745851)
chr1 (1-53)||(50005184-50005236)
chr1 (12-52)||(51847855-51847895)
chr1 (20-51)||(23536173-23536204)
chr1 (20-55)||(32128048-32128083)
chr1 (20-59)||(34007441-34007480)
chr1 (20-55)||(37214924-37214959)
chr1 (20-59)||(45565500-45565539)
chr1 (20-55)||(48953587-48953622)
chr1 (12-46)||(44570687-44570721)
chr1 (1-46)||(37448420-37448465)
chr1 (12-57)||(50005077-50005122)
chr1 (12-56)||(10166498-10166542)
chr1 (1-53)||(34756532-34756584)
chr1 (1-53)||(38277520-38277571)
[»] chr6 (19 HSPs)
chr6 (1-59)||(6919812-6919870)
chr6 (1-55)||(9285647-9285701)
chr6 (1-59)||(8574770-8574828)
chr6 (1-55)||(13487275-13487329)
chr6 (12-58)||(28918162-28918208)
chr6 (1-55)||(34244999-34245053)
chr6 (15-55)||(33733432-33733472)
chr6 (1-55)||(8574695-8574749)
chr6 (1-55)||(29889453-29889507)
chr6 (22-58)||(1195348-1195384)
chr6 (1-53)||(6919710-6919762)
chr6 (1-53)||(9763014-9763066)
chr6 (1-57)||(9763117-9763173)
chr6 (12-58)||(776196-776242)
chr6 (20-58)||(8475176-8475214)
chr6 (15-55)||(1368477-1368517)
chr6 (12-55)||(776080-776123)
chr6 (20-59)||(9285753-9285792)
chr6 (12-51)||(15299541-15299579)
[»] scaffold1562 (2 HSPs)
scaffold1562 (1-53)||(510-562)
scaffold1562 (1-58)||(402-459)
[»] scaffold1158 (2 HSPs)
scaffold1158 (1-53)||(2031-2083)
scaffold1158 (1-58)||(2134-2191)
[»] scaffold0009 (2 HSPs)
scaffold0009 (12-57)||(42094-42139)
scaffold0009 (1-55)||(41997-42051)
[»] scaffold0048 (1 HSPs)
scaffold0048 (1-53)||(82945-82997)
[»] scaffold0240 (1 HSPs)
scaffold0240 (20-55)||(17605-17640)
[»] scaffold0129 (2 HSPs)
scaffold0129 (12-59)||(19194-19241)
scaffold0129 (12-53)||(19815-19855)
[»] scaffold0039 (1 HSPs)
scaffold0039 (20-55)||(109049-109084)
[»] scaffold0400 (1 HSPs)
scaffold0400 (12-54)||(4528-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (12-54)||(5172-5214)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-55)||(2867-2921)
[»] scaffold0169 (1 HSPs)
scaffold0169 (1-59)||(4071-4129)
[»] scaffold0301 (1 HSPs)
scaffold0301 (12-53)||(7153-7194)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-57)||(15883-15938)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-57)||(2925-2980)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-51)||(56379-56429)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-54)||(10887-10940)


Alignment Details
Target: chr8 (Bit Score: 165; Significance: 2e-88; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 67 - 243
Target Start/End: Complemental strand, 24999115 - 24998939
Alignment:
Q  67 acggttgttatgatttatttagccaaaaatggaaaatctgggacatgcacgtgataattatatcctacctcccgccaaaacgaaccgttgtctcccgcta 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24999115 acggttgttatgatttatttagccaaaaatggaaaatctgggacatgcacgtgaaaattatatcctacctcccgccaaaacgaaccgttgtctcccgcta 24999016  T
Q  167 ccgaccatcctacacaaactatctcttttaaaagcccttcactcatactctcacaaacacacctattcattcatctc 243  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  24999015 ccgaccatcctacacaaactatctcttttaaaaacccttcactcatactcacacaaacacacctattcattcatctc 24998939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 17110923 - 17110866
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||    
T  17110923 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttag 17110866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23011788 - 23011732
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||    
T  23011788 aattccctcataacattacattccctcaaaacattctcccgtccaaacacactctta 23011732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 42711385 - 42711441
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  |||||||||||||||||||||||||||| |||||||||||||||||    
T  42711385 aattccctcaaaacattacattccctcaaaacattccccaatccaaacacactctta 42711441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 3853659 - 3853616
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  3853659 aacattacattccctcaaaacattcccccatccaaacacactct 3853616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 3858117 - 3858074
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  3858117 aacattacattccctcaaaacattcccccatccaaacacactct 3858074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 36103144 - 36103097
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  36103144 aacattacattccctcaaaacattcctccatccaaacacactcttagg 36103097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33377326 - 33377384
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  |||| || ||||||||||||||||||||||||||||||||||||||||    
T  33377326 aattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactcttagg 33377384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33902721 - 33902667
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  33902721 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 33902667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40046858 - 40046800
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  |||||||||||||||||||||||||  |||||||||||||||||||||    
T  40046858 aattccctcaaaacattacattccctcaaaacattcatccatccaaacacactcttagg 40046800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 14991735 - 14991690
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  14991735 aacattacattacctcaaaacattcccccatccaaacacactctta 14991690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 27322689 - 27322734
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  27322689 aacattacattccctcaaaacattctcccatccaaacacactctta 27322734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 14800014 - 14799975
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  14800014 attccctcaaaacattcccccatccaaacacactcttagg 14799975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 24045003 - 24044960
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  24045003 aacattacattccctcaaaacattccctcatccaaacacactct 24044960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 28324702 - 28324745
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  28324702 aacattacattccctcaaaacattcctccatccaaacacactct 28324745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 29257391 - 29257434
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  29257391 aacaatacattccctcaaaacattcccccatccaaacacactct 29257434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 35979033 - 35979084
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacac 52  Q
    ||||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  35979033 aattccctcttaagattacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14800065 - 14800119
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  14800065 aattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 14800119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17110974 - 17111028
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||||||| | |||||||||||||||||    
T  17110974 aattccctcaaaacattacattccctcaaaacatttctccatccaaacacactct 17111028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 32626074 - 32626120
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||    
T  32626074 aacattacattccctcaaaagattcccccatccaagcacactcttag 32626120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44889408 - 44889354
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||| |||||||||||||||||| |||||||||||||||||    
T  44889408 aattccctcaaaacattatattccctcaaaacattcctccatccaaacacactct 44889354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4156272 - 4156324
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  |||||||||||||||||||| |||| ||||||||||||||||    
T  4156272 aattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29482836 - 29482888
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  |||| ||| |||||||||||||||||||||||||||||||||    
T  29482836 aattccctcaaaacaatacgttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 14281 - 14235
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  14281 aacattacattccctccaaacatt-ccccatccaaacacactcttagg 14235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 515572 - 515615
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||| |||||||||||| |||||||||||||||||    
T  515572 aacattacattccttcaaaacattcctccatccaaacacactct 515615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 29611423 - 29611388
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  29611423 attccctcaaaacattcccccatccaaacacactct 29611388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 34008834 - 34008799
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  34008834 attccctcaaaacattcccccatccaaacacactct 34008799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 44346718 - 44346757
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacaca 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  44346718 aacaatacattccctcaaaacattcccccatccaaacaca 44346757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30435300 - 30435250
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacaca 51  Q
    |||||||||  |||||||||||||||||||||||| | |||||||||||||    
T  30435300 aattccctccaaacattacattccctcaaaacatttctccatccaaacaca 30435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 30444963 - 30445001
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  30444963 attccctcaaaacattcctccatccaaacacactcttag 30445001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 33986047 - 33986001
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||||||||| | |||| ||||||||||||||||||||||||||||    
T  33986047 aacattacattacttcaagacattcccccatccaaacacactcttag 33986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37268112 - 37268166
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||| |||||||| ||||||| |||||||||||||||    
T  37268112 aattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 37268166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 42739984 - 42739947
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||| |||||||||||||||||||    
T  42739984 attccctcaaaacattcctccatccaaacacactctta 42739947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3853721 - 3853773
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||| |||||||| ||| |||||||||||||||||    
T  3853721 aattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3853773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3858179 - 3858231
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||| |||||||| ||| |||||||||||||||||    
T  3858179 aattccctccaaacattacattacctcaaaatatttccccatccaaacacact 3858231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13404881 - 13404829
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||| |||||||| ||| |||||||||||||||||    
T  13404881 aattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 13404932 - 13404976
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatcca 45  Q
    |||||||||  |||||||||||||||||||||||||||| |||||    
T  13404932 aattccctcaaaacattacattccctcaaaacattcccctatcca 13404976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 7202934 - 7202969
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||||| |||||||||||||||||    
T  7202934 attccctcaaaacattcctccatccaaacacactct 7202969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 30435350 - 30435385
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||| |||||||||||||||||||    
T  30435350 attccctcaaaacatttccccatccaaacacactct 30435385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31807462 - 31807409
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||| ||||||||||| | ||||||||||||||||    
T  31807462 aattccctcaaaacattacattcc-tcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 33902772 - 33902829
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  ||||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  33902772 aattccctcaaaacaaaacattccctcaaa-cattcccccatcccaacacactcttagg 33902829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 1088317 - 1088362
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||| ||||||| ||||||||||||| ||| |||||||||||||||    
T  1088317 aacaatacattctctcaaaacattcctccacccaaacacactctta 1088362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 7202900 - 7202863
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||  |||||||||||||||||||    
T  7202900 attccctcaaaacattcatccatccaaacacactctta 7202863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 11744759 - 11744804
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||| ||| |||| | ||||||||||||||||||    
T  11744759 aacattacattccctctaaatattctctcatccaaacacactctta 11744804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 54
Target Start/End: Complemental strand, 34388556 - 34388527
Alignment:
Q  25 ctcaaaacattcccccatccaaacacactc 54  Q
    ||||||||||||||||||||||||||||||    
T  34388556 ctcaaaacattcccccatccaaacacactc 34388527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 8469550 - 8469514
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctt 56  Q
    ||||||||||||||||||| | |||||||||||||||    
T  8469550 attccctcaaaacattccctcgtccaaacacactctt 8469514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8689186 - 8689138
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaaca 49  Q
    |||||||||  ||||||||||||| |||||||||| | |||||||||||    
T  8689186 aattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 52
Target Start/End: Original strand, 26520469 - 26520501
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacac 52  Q
    ||||||||||||||||||| |||||||||||||    
T  26520469 attccctcaaaacattccctcatccaaacacac 26520501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 28190745 - 28190789
Alignment:
Q  15 attacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||| || ||| |||||||||| ||||||||||||||||||||    
T  28190745 attacaatcactcgaaacattcccacatccaaacacactcttagg 28190789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 59
Target Start/End: Original strand, 38573517 - 38573545
Alignment:
Q  31 acattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||||||||||||||||    
T  38573517 acattcccccatccaaacacactcttagg 38573545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 10480173 - 10480116
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10480173 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 10480116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 14365754 - 14365698
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  14365754 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 14365698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41461620 - 41461674
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  41461620 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 41461674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 11684653 - 11684596
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||    
T  11684653 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacattcttag 11684596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11793949 - 11793897
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  11793949 aattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 14537242 - 14537198
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctt 56  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  14537242 aacattacattccctcaaaacattcccccatccaaacacactctt 14537198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17180351 - 17180295
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  17180351 aattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 17180295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 27033544 - 27033488
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  |||||||||||| |||||||||||||||||||||||||||||||||    
T  27033544 aattccctcaaaacattacattctctcaaaacattcccccatccaaacacactctta 27033488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 14365804 - 14365858
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  14365804 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14365858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 33189287 - 33189333
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  33189287 aacaatacattccctcaaaacattcccccatccaaacacactcttag 33189333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 769079 - 769034
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  769079 aacaatacattccctcaaaacattcccccatccaaacacactctta 769034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 11141348 - 11141303
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  11141348 aacaatacattccctcaaaacattcccccatccaaacacactctta 11141303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 1583839 - 1583882
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  1583839 aacaatacattccctcaaaacattcccccatccaaacacactct 1583882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 784898 - 784952
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||| |||||| |||||||||||||||||||||||    
T  784898 aattccctcaaaacattacattccatcaaaatattcccccatccaaacacactct 784952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8735898 - 8735844
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||||| |||||||||||||||   ||||||||||||||||||    
T  8735898 aattccctcgtaacattatattccctcaaaacatgttcccatccaaacacactct 8735844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11716462 - 11716408
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||||||||  |||||||||||||||||    
T  11716462 aattccctcaaaacattacattccctcaaaacattcttccatccaaacacactct 11716408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11716504 - 11716550
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaa 47  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||    
T  11716504 aattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 7228042 - 7228087
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||    
T  7228042 aacattacattctctcaaaacatttccccatccaaacacactctta 7228087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11532272 - 11532324
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  |||||||||||||||| ||| |||||||||||||||||||||    
T  11532272 aattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 3345798 - 3345759
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  3345798 attccctcaaaacattcccccatccaaacacacttttagg 3345759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 14537305 - 14537340
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  14537305 attccctcaaaacattcccccatccaaacacactct 14537340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 19231305 - 19231344
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  19231305 attccctcaaaacattcccccatccaaacacaatcttagg 19231344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 28740650 - 28740599
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacac 52  Q
    |||||||||  |||||||||||||||||||||||| |||||| |||||||||    
T  28740650 aattccctcaaaacattacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 47
Target Start/End: Complemental strand, 30698324 - 30698289
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaa 47  Q
    ||||||||||||||||||||||||||||||||||||    
T  30698324 aacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 35047709 - 35047752
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  35047709 aacaatacatttcctcaaaacattcccccatccaaacacactct 35047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 784836 - 784790
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||    
T  784836 aacattacattccctcaaaacatttttccatccaaacacactcttag 784790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 3092325 - 3092279
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  3092325 aacaatacattccctcaaaacattcctccatccaaatacactcttag 3092279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 17905697 - 17905651
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||| |||||||||||||| ||||| |||||||||||||    
T  17905697 aacattacattctctcaaaacattccctcatcctaacacactcttag 17905651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 45094490 - 45094544
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||| ||||||||||||||||||| ||| ||||||||||||    
T  45094490 aattccctcaaaacattatattccctcaaaacattccctcattcaaacacactct 45094544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 11684696 - 11684733
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||| |||||||||||||||||||    
T  11684696 attccctcaaaacattcctccatccaaacacactctta 11684733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 11824786 - 11824819
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacact 53  Q
    ||||||||||||||||||||||||||||||||||    
T  11824786 attccctcaaaacattcccccatccaaacacact 11824819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 41461569 - 41461512
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  ||||||||||| |||||||| ||| ||||||||||||||||| ||||    
T  41461569 aattccctcaaaacattacattacctcaaaatatttccccatccaaacacactattag 41461512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 13017819 - 13017779
Alignment:
Q  15 attacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||| || ||||||||||||||||    
T  13017819 attacattccctcaaaacatttccacatccaaacacactct 13017779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39630279 - 39630223
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  |||| ||||||||||||||||||| | |||| ||||||||||||||    
T  39630279 aattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactctta 39630223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 8736461 - 8736496
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8736461 attccctcaaaacattccctcatccaaacacactct 8736496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 11595372 - 11595333
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  11595372 attccctcaaaacattaccccatccaaacacactattagg 11595333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 21504503 - 21504468
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||||||| |||||||||||||||    
T  21504503 attccctcaaaacattccccgatccaaacacactct 21504468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10244231 - 10244177
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||| |||||||| || |||| ||||||||||||||||||    
T  10244231 aattccctcaaaacattactttccctcagaatattctcccatccaaacacactct 10244177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 14954306 - 14954264
Alignment:
Q  15 attacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||| ||||||||||||| | |||||||||||||||||    
T  14954306 attacattcactcaaaacattcctctatccaaacacactctta 14954264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 41585710 - 41585748
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  41585710 attccctcaaaacatttcaccatccaaacacactcttag 41585748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 11607274 - 11607241
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||||||||| |||||||||||||||||    
T  11607274 attccctcaaaacattaccccatccaaacacact 11607241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 44205678 - 44205711
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||||||||| |||||||||||||||||    
T  44205678 attccctcaaaacatttccccatccaaacacact 44205711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44256212 - 44256263
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||| |||||||  |||||||||||||||||||||    
T  44256212 aattccctcaaaacattacattacctcaaat-attcccccatccaaacacact 44256263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 4e-22; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 31632776 - 31632719
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  31632776 aattccctcataacattacattccctcaaaacattcccccatccaaacacactcttag 31632719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26162142 - 26162196
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26162142 aattccctcataacattacattccctcaaaacattcccccatccaaacacactct 26162196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 35776960 - 35777017
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  35776960 aattccctcataacattacattccctcaaaacattccctcatccaaacacactcttag 35777017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43955571 - 43955514
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  43955571 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttag 43955514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 40110791 - 40110735
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  40110791 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 40110735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 2057449 - 2057392
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||    
T  2057449 aattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactcttag 2057392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43955619 - 43955671
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  43955619 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 34398965 - 34399008
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  34398965 aacattacattccctcaaaacattcccccatccaaacacactct 34399008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6498770 - 6498824
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  6498770 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 6498824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 14603278 - 14603324
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||    
T  14603278 aacaatacattccctcaaaacattcccccatccaaacacactcttag 14603324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28539173 - 28539227
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  28539173 aattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 28539227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 40110843 - 40110901
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  |||||||||||||||| ||||||| |||||||||||||||||||||||    
T  40110843 aattccctcaaaacattacattccctcgaaacatttccccatccaaacacactcttagg 40110901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 5644731 - 5644674
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||||||||||||||||||||||||| |||| |||||||||||||||    
T  5644731 aattccctcaaaacattacattccctcaaaacattcctccattcaaacacactcttag 5644674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 39342658 - 39342703
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||| |||||||||||||||||||||||||||||||||||||||||    
T  39342658 aacaatacattccctcaaaacattcccccatccaaacacactctta 39342703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 29065873 - 29065817
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  |||||||||||||||||||||||||  |||||||||||||||||||    
T  29065873 aattccctcaaaacattacattccctcaaaacattcatccatccaaacacactctta 29065817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 29639220 - 29639276
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||| |||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  29639220 aatttcctcataacattacattccctgaaaacattcccccatccatacacactctta 29639276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 35455847 - 35455804
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  35455847 aacaatacattccctcaaaacattcccccatccaaacacactct 35455804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 2057500 - 2057554
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  2057500 aattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 2057554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5644782 - 5644836
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||| ||||||||| ||||||||||||||||||||||    
T  5644782 aattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactct 5644836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 9784936 - 9784989
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactc 54  Q
    |||||||||  |||| ||||||||||||||||||||| ||||||||||||||||    
T  9784936 aattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 31913271 - 31913234
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||||||||||||||||||||||||||||||    
T  31913271 attccctcaaaacattcccccatccaaacacactctta 31913234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 25189231 - 25189287
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  |||||| |||| ||||||||||||||| ||||||||||||||||||    
T  25189231 aattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactctta 25189287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 40854089 - 40854133
Alignment:
Q  15 attacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  40854089 attacattccctcagaacatttccccatccaaacacactcttagg 40854133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 23548627 - 23548670
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||| ||||||||||||||||||||| |||||||||||||||||    
T  23548627 aacaatacattccctcaaaacattcctccatccaaacacactct 23548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 30080811 - 30080846
Alignment:
Q  24 cctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||||||||||||||||||||||||||||    
T  30080811 cctcaaaacattcccccatccaaacacactcttagg 30080846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 30629100 - 30629061
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacaca 51  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  30629100 aacaatacattccctcaaaacattcccccatccaaacaca 30629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 40854022 - 40853987
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  40854022 attccctcaaaacattcccccatccaaacacactct 40853987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18789251 - 18789305
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||| |||||||| |||| ||||||| ||||| |||||||||||||||||    
T  18789251 aattccctcataacattatattctctcaaaatattcctccatccaaacacactct 18789305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23455252 - 23455302
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacaca 51  Q
    |||||||||  |||| |||||||||||||||||||||| ||||||||||||    
T  23455252 aattccctcaaaacaatacattccctcaaaacattccctcatccaaacaca 23455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29065924 - 29065978
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||| ||| |||||||||| |||||||||||||||||    
T  29065924 aattccctcaaaacattacattaccttaaaacattcctccatccaaacacactct 29065978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 30587909 - 30587943
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactc 54  Q
    |||||||||||||||||||||||||||||||||||    
T  30587909 attccctcaaaacattcccccatccaaacacactc 30587943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 21636001 - 21636038
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaaca 49  Q
    |||||||||||||||||||||||| |||||||||||||    
T  21636001 aacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 29195752 - 29195707
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||| |||||||| ||||| |||||||||||||||||||    
T  29195752 aacattacattacctcaaaatattcctccatccaaacacactctta 29195707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 30524309 - 30524253
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  ||||||||||||| |||||||||| | ||||||| |||||||||||    
T  30524309 aattccctcaaaacattacattccttcaaaacattactccatccatacacactctta 30524253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 13815000 - 13815035
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||||||| |||||||||||||||    
T  13815000 attccctcaaaacattcccctatccaaacacactct 13815035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Original strand, 31913309 - 31913340
Alignment:
Q  24 cctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||    
T  31913309 cctcaaaacattcccccatccaaacacactct 31913340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 34388308 - 34388262
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||| || |||||||| ||| ||||||||||||||||||||||    
T  34388308 aacattacttttcctcaaaatatttccccatccaaacacactcttag 34388262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34388370 - 34388424
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  || |||||||||||||||||||||||  ||| ||||||||||||    
T  34388370 aattccctcaaaatattacattccctcaaaacattccatcattcaaacacactct 34388424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 44915238 - 44915192
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||| ||||||||||| |||| | |||||||||||||||||||    
T  44915238 aacattacgttccctcaaaaaattctctcatccaaacacactcttag 44915192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 21635928 - 21635883
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||| |||||||| |||| ||||||||| ||||||||||    
T  21635928 aacattacattacctcaaaatattctcccatccaagcacactctta 21635883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 57
Target Start/End: Complemental strand, 42816593 - 42816553
Alignment:
Q  17 tacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||||| || || ||||||||||||||    
T  42816593 tacattccctcaaaacattctccaattcaaacacactctta 42816553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 40643922 - 40643980
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40643922 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 40643980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 25935306 - 25935363
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25935306 aatttcctcataacattacattccctcaaaacattcccccatccaaacacactcttag 25935363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15374065 - 15374121
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  15374065 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 15374121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 9894338 - 9894388
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacaca 51  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  9894338 aattccctggtaacattacattccctcaaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 2316432 - 2316376
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||||||||    
T  2316432 aattccctcaaaatattacattccctcaaaacattcccccatccaaacacactctta 2316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 2721576 - 2721628
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  2721576 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19533923 - 19533975
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||||||||    
T  19533923 aattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28828421 - 28828369
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  28828421 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 22303897 - 22303940
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22303897 aacattacattccctcaaaacattcccccatccaaacacactct 22303940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 41762242 - 41762289
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||    
T  41762242 aacaatacattccctcaaaacattcccccatccaaacacactcttagg 41762289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9764443 - 9764497
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||||||||||    
T  9764443 aattccctcaaaacattacattccctcgaaacattcccccatccaaacacactct 9764497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15804376 - 15804322
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  15804376 aattccctcaaaacactacattccctcaaaacattcccccatccaaacacactct 15804322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 22767006 - 22766952
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  22767006 aattccctcaaaacattatattccctcaaaacattcccccatccaaacacactct 22766952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26281285 - 26281339
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||||||||||||    
T  26281285 aattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 37722910 - 37722964
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  37722910 aattccctcaaaacattacattccctcaaaatattcccccatccaaacacactct 37722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 40090441 - 40090487
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  40090441 aacattacatttcctcaaaacattcccccatccaaacacactcttag 40090487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 927356 - 927299
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  927356 aattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactcttag 927299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3563331 - 3563278
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactc 54  Q
    |||||||||  |||||||||||||||||||||||||||| ||||||||||||||    
T  3563331 aattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9764392 - 9764335
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  9764392 aattccctcaaaacattactttccctcaaaatattcccccatccaaacacactcttag 9764335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20523238 - 20523291
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactc 54  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||||||||    
T  20523238 aattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15804399 - 15804451
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37145517 - 37145569
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||| ||||    
T  37145517 aattctctcataacattacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 2550363 - 2550324
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2550363 attccctcaaaacattcccccatccaaacacactcttagg 2550324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 5658819 - 5658772
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  5658819 aacattacattccctcaaaacatttctccatccaaacacactcttagg 5658772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 33245399 - 33245446
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||    
T  33245399 aacattacattccatcaaaacattcccccatccaaacacactcatagg 33245446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 20523187 - 20523133
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  || |||||||||||||||||||||| ||||||||||||||||||    
T  20523187 aattccctcagaatattacattccctcaaaacattctcccatccaaacacactct 20523133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 22305147 - 22305109
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22305147 attccctcaaaacattcccccatccaaacacactcttag 22305109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 34982254 - 34982212
Alignment:
Q  17 tacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  34982254 tacattccctcaaaacattcccctatccaaacacactcttagg 34982212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 40809395 - 40809337
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  ||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  40809395 aattccctcaaaacattatattctctcaaaacatttccccatccaaacacactcttagg 40809337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 6634069 - 6634012
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  ||||||||||| |||||||| || |||||||||||||||||||||||    
T  6634069 aattccctcaaaacattacattacctcaaaatatccccccatccaaacacactcttag 6634012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 13243513 - 13243453
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatc--caaacacactcttagg 59  Q
    |||||||||  ||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  13243513 aattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactcttagg 13243453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16515123 - 16515180
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  ||||||||||||||| ||||||||| | |||||||||||||||||||    
T  16515123 aattccctcaaaacattacattccctaaaaacattctctcatccaaacacactcttag 16515180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 23092078 - 23092123
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||    
T  23092078 aacattacattcgttcaaaacattcccccatccaaacacactctta 23092123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 32250114 - 32250169
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  |||||||| ||||||||||||||| |||||||||||||||||||||    
T  32250114 aattccctcaaaacattactttccctcaaaacatt-ccccatccaaacacactctta 32250169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 32470925 - 32470878
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||||||||||| | ||||||||| |||||||||||    
T  32470925 aacattacattccctcaaaacatttctccatccaaatacactcttagg 32470878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 33146096 - 33146061
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  33146096 attccctcaaaacattcccccatccaaacacactct 33146061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 33146226 - 33146191
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  33146226 attccctcaaaacattcccccatccaaacacactct 33146191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 15374014 - 15373960
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||| ||||  |||||||||||||||||    
T  15374014 aattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactct 15373960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 13243520 - 13243561
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacact 53  Q
    ||||||||||| |||||||| |||||||||||||||||||||    
T  13243520 aacattacattacctcaaaatattcccccatccaaacacact 13243561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 15270871 - 15270908
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||| |||||||||||||||||||    
T  15270871 attccctcaaaacattcctccatccaaacacactctta 15270908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 32390077 - 32390134
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||||||||||||||||||| |||| |  ||||||||||||||||||    
T  32390077 aattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactcttag 32390134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28828452 - 28828504
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||| |||||||| ||| |||||||||||||||||    
T  28828452 aattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 28828504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32390026 - 32389974
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  || |||||||||| ||||||||||||| ||||||||||||||    
T  32390026 aattccctcaaaatattacattccttcaaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 22302574 - 22302539
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||| |||||||||||||||||||    
T  22302574 attccctcaaaacattaccccatccaaacacactct 22302539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 34982313 - 34982348
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||||| |||||||||||||||||    
T  34982313 attccctcaaaacattcctccatccaaacacactct 34982348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 40809457 - 40809500
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||    
T  40809457 aacattacattctctcaaaacatttccccatctaaacacactct 40809500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 54
Target Start/End: Original strand, 12064485 - 12064519
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactc 54  Q
    |||||||||||||||||||||||| ||||||||||    
T  12064485 attccctcaaaacattcccccatcaaaacacactc 12064519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35379397 - 35379344
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||  ||||||||||| |||||||||||||||||||    
T  35379397 aattccctcaaaacattacattatctcaaaacatt-ccccatccaaacacactct 35379344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 14834867 - 14834826
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||||||||| |||||||| ||||| ||||||||||    
T  14834867 aacattacattccctcgaaacattctcccatgcaaacacact 14834826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 2e-20; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1112659 - 1112601
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1112659 aattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactcttagg 1112601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 31473903 - 31473849
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  31473903 aattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31473849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10633086 - 10633035
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacac 52  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  10633086 aattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 7352917 - 7352975
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||    
T  7352917 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacactcttagg 7352975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 49111417 - 49111471
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  49111417 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49111471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 857344 - 857398
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||||||| |||||||||||||||||||    
T  857344 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 857398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 14982334 - 14982280
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  14982334 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 14982280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15660288 - 15660342
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  15660288 aattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 15660342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 36455961 - 36455907
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  36455961 aattccctcaaaacattagattccctcaaaacattcccccatccaaacacactct 36455907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 4441391 - 4441338
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactc 54  Q
    |||||||||  |||||||||||||||||||||||||| ||||||||||||||||    
T  4441391 aattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 7352855 - 7352814
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacact 53  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7352855 aacattacattccctcaaaacattcccccatccaaacacact 7352814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 28845925 - 28845876
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacac 50  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  28845925 aattccctcgaaacattacattccctcaaaacattcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 31742880 - 31742924
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctt 56  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  31742880 aacattacattccctcaaaacattcctccatccaaacacactctt 31742924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 16516214 - 16516171
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  16516214 aacattacattccgtcaaaacattcccccatccaaacacactct 16516171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 36456045 - 36456088
Alignment:
Q  15 attacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  36456045 attacattccctcaaaacattcctccatccaaacacactcttag 36456088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2125911 - 2125857
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||| ||||||||||||||| |||||||||||||||||||||||    
T  2125911 aattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactct 2125857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4896702 - 4896648
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||||||||||||    
T  4896702 aattccctcaaaacattacattacctcaaaatattcccccatccaaacacactct 4896648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10128079 - 10128133
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||| |||||||    
T  10128079 aattccctcaaaacattacattctctcaaaacattcccccatccaaatacactct 10128133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 11348342 - 11348396
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||||| |||||||||||||||||||| |||||||    
T  11348342 aattccctcaaaacattacattcccttaaaacattcccccatccaaatacactct 11348396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28845976 - 28846030
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||| |||||||||||||||| |||||||||||||||||||    
T  28845976 aattccctcaaaacattatattccctcaaaacatttccccatccaaacacactct 28846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 4896737 - 4896794
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  4896737 aattccctcaaaacattacattccctcaaaatatttccccatccaaacacactattag 4896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 15660237 - 15660180
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  ||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  15660237 aattccctcaaaacattacattacctcaaaatattcccctatccaaacacactcttag 15660180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 31947647 - 31947588
Alignment:
Q  1 aattccctcgtaacattaca---ttccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||||||||||||   |||||||||||||||| |||||||||||| |||||||    
T  31947647 aattccctcgtaacattacaatattccctcaaaacattctcccatccaaacatactctta 31947588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 41498606 - 41498651
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||    
T  41498606 aacattacattccctcaaaatattcctccatccaaacacactctta 41498651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 42542983 - 42543024
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  42542983 aacattacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 26251015 - 26251050
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  26251015 attccctcaaaacattcccccatccaaacacactct 26251050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1107157 - 1107211
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||| |||||||||||| ||||||||||||||| |||||||    
T  1107157 aattccctcaaaacattatattccctcaaaatattcccccatccaaatacactct 1107211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1112727 - 1112781
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||| |||||||||||  |||||||||| |||||||||||||| |||||    
T  1112727 aattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactct 1112781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1539695 - 1539649
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaa 47  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||    
T  1539695 aattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 57
Target Start/End: Complemental strand, 42844583 - 42844541
Alignment:
Q  15 attacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  42844583 attacattccctcaaaacattcccccatctatacacactctta 42844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 14982385 - 14982422
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||| |||||||||||||||||||||||||    
T  14982385 attccctcaaaagattcccccatccaaacacactctta 14982422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 42775658 - 42775625
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacact 53  Q
    ||||||||||||||||||||||||||||||||||    
T  42775658 attccctcaaaacattcccccatccaaacacact 42775625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 5715787 - 5715744
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||  |||||||||||||| ||||||||||||||||    
T  5715787 aacattacattatctcaaaacattccctcatccaaacacactct 5715744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 11041010 - 11040968
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||||||| ||| |||||||||||||||||||    
T  11041010 aacattacattccctcaaaatatt-ccccatccaaacacactct 11040968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 26250952 - 26250905
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||| |||||||| |||||| |||||||||||||| |||||    
T  26250952 aacattacattacctcaaaatattccctcatccaaacacactattagg 26250905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 47108353 - 47108318
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||| ||||||||||||||||    
T  47108353 attccctcaaaacattccctcatccaaacacactct 47108318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 53760810 - 53760845
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||| ||||||||||||    
T  53760810 attccctcaaaacattcccccattcaaacacactct 53760845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 54
Target Start/End: Original strand, 4441438 - 4441468
Alignment:
Q  24 cctcaaaacattcccccatccaaacacactc 54  Q
    |||||||||||||||||||||||||||||||    
T  4441438 cctcaaaacattcccccatccaaacacactc 4441468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 35470176 - 35470122
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||| ||||||||||||||||||| | ||||| |||||||||||    
T  35470176 aattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactct 35470122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 42844650 - 42844700
Alignment:
Q  3 ttccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||  ||||||||||| |||||||| ||| |||||||||||||||||    
T  42844650 ttccctcaaaacattacattacctcaaaatatttccccatccaaacacact 42844700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 10128017 - 10127976
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacact 53  Q
    ||||||||||| | |||||| |||||||||||||||||||||    
T  10128017 aacattacattacttcaaaatattcccccatccaaacacact 10127976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 21012596 - 21012633
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||  |||||||||||||||||||    
T  21012596 attccctcaaaacattcgtccatccaaacacactctta 21012633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 46243115 - 46243148
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacact 53  Q
    |||| |||||||||||||||||||||||||||||    
T  46243115 attctctcaaaacattcccccatccaaacacact 46243148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 53
Target Start/End: Original strand, 52295065 - 52295098
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacact 53  Q
    |||||||| |||||||||||||||||||||||||    
T  52295065 attccctcgaaacattcccccatccaaacacact 52295098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 52493968 - 52493924
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||| | |||||||||||||| |||||||||||||||||    
T  52493968 aacattacattacttcaaaacattcccc-atccaaacacactctta 52493924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 49457397 - 49457339
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  49457397 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactcttagg 49457339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 42005982 - 42006029
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42005982 aacattacattccctcaaaacattcccccatccaaacacactcttagg 42006029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 44436301 - 44436254
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44436301 aacattacattccctcaaaacattcccccatccaaacacactcttagg 44436254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 27251999 - 27252057
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27251999 aattccctcaaaacattacattccctcaaaacatccccccatccaaacacactcttagg 27252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 44692927 - 44692985
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||||||    
T  44692927 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactcttagg 44692985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 46672821 - 46672875
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  46672821 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 46672875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9129449 - 9129505
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  9129449 aattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9129505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9137556 - 9137612
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||    
T  9137556 aattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctta 9137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 35279931 - 35279978
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  35279931 aacattacattccctcaaaacattcccccatccaaacacattcttagg 35279978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 47767475 - 47767432
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  47767475 aacattacattccctcaaaacattcccccatccaaacacactct 47767432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 36398007 - 36398061
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  36398007 aattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactct 36398061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 44692876 - 44692822
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||| |||||||||||||||||||||||||||||||||||    
T  44692876 aattccctcaaaacattactttccctcaaaacattcccccatccaaacacactct 44692822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 46001418 - 46001361
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||    
T  46001418 aattccctcgaaacattacattacctcaaaatattccgccatccaaacacactcttag 46001361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 5415837 - 5415782
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctt 56  Q
    |||||||||  |||||||||||||||||||| ||||||| ||||||||||||||||    
T  5415837 aattccctcaaaacattacattccctcaaaatattcccctatccaaacacactctt 5415782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 37054437 - 37054394
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  37054437 aacattacattcccttaaaacattcccccatccaaacacactct 37054394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 21307550 - 21307600
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacaca 51  Q
    |||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  21307550 aattccctcaaaacattacattcccgcaaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 53129872 - 53129918
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||    
T  53129872 aacattacattccctcgaaacattccctcatccaaacacactcttag 53129918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 671637 - 671694
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  671637 aattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacactcttag 671694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 7302389 - 7302344
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||    
T  7302389 aacattacattctctcaaaacattccctcatccaaacacactctta 7302344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34088625 - 34088568
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||| ||||||||||||||||||| | ||||||||||||||||||||    
T  34088625 aattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactcttag 34088568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 5415899 - 5415942
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  5415899 aacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 46429449 - 46429414
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  46429449 attccctcaaaacattcccccatccaaacacactct 46429414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19475870 - 19475824
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaa 47  Q
    |||| |||| ||||||||||||||||||||||||||| |||||||||    
T  19475870 aattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 28092268 - 28092214
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||| ||||| |||||||||||||||||||||||||| |||||    
T  28092268 aattccctcaaaacatcacatttcctcaaaacattcccccatccaaacatactct 28092214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 30767158 - 30767104
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||| || |||||||| |||||||||||||||| ||||||||||| |||||||    
T  30767158 aattccttcataacattagattccctcaaaacattaccccatccaaatacactct 30767104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 9129387 - 9129342
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||||| | || ||||||||||||||||||||    
T  9129387 aacattacattccctcaaaatagtctcccatccaaacacactctta 9129342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 9137494 - 9137449
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||||| | || ||||||||||||||||||||    
T  9137494 aacattacattccctcaaaatagtctcccatccaaacacactctta 9137449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 53
Target Start/End: Complemental strand, 27485507 - 27485474
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacact 53  Q
    ||||||||||||||||||||||||||||||||||    
T  27485507 attccctcaaaacattcccccatccaaacacact 27485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 37321622 - 37321659
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37321622 attccctcaaaacattccccaatccaaacacactctta 37321659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 52527080 - 52527039
Alignment:
Q  11 taacattacattccctcaaaacattcccccatccaaacacac 52  Q
    ||||||||||| || |||||||||||||||||||||||||||    
T  52527080 taacattacatcccttcaaaacattcccccatccaaacacac 52527039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 54761583 - 54761620
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||| |||||||||||||||||||    
T  54761583 attccctcaaaacattcctccatccaaacacactctta 54761620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 2732682 - 2732639
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||    
T  2732682 aacattatattacctcaaaacatttccccatccaaacacactct 2732639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 57
Target Start/End: Original strand, 9007480 - 9007511
Alignment:
Q  26 tcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||||||||||||||||||||||||    
T  9007480 tcaaaacattcccccatccaaacacactctta 9007511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 25655350 - 25655315
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||| |||||||||||||||||||    
T  25655350 attccctcaaaacatttccccatccaaacacactct 25655315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 46429512 - 46429555
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||    
T  46429512 aacattacattacctcaaaatattccctcatccaaacacactct 46429555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 48947648 - 48947605
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||| ||||||||||||||||||||  |||||||||||||||||    
T  48947648 aacaatacattccctcaaaacattcttccatccaaacacactct 48947605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 25655403 - 25655441
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||| |||||||||| ||||||||||||||||||||||    
T  25655403 attccgtcaaaacatttccccatccaaacacactcttag 25655441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 28092320 - 28092358
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||||||||||||||  ||||||||||||||    
T  28092320 attccctcaaaacattcccccatttaaacacactcttag 28092358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 31070460 - 31070422
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccc 39  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  31070460 aattccctcaaaacattacattccctcaaaacattcccc 31070422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 42130746 - 42130688
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  ||||||||||  |||||||| ||||||||| ||||||||||| |||||    
T  42130746 aattccctcaaaacattacatcacctcaaaatattcccccacccaaacacactattagg 42130688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47284331 - 47284385
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||| |||||||| |||| | ||||||||||||||||    
T  47284331 aattccctcaaaacattacattacctcaaaatattctctcatccaaacacactct 47284385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 53470447 - 53470501
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||| || |||||||||||||||| || ||||||||||||||||    
T  53470447 aattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactct 53470501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Original strand, 332081 - 332118
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||  |||||||||||||||||||    
T  332081 attccctcaaaacattcttccatccaaacacactctta 332118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 2104787 - 2104750
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||| ||||||||||| |||||||||||||||||    
T  2104787 attccctcgaaacattcccctatccaaacacactctta 2104750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 24273239 - 24273293
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24273239 aattccctcataacattacattccctcaaaacattcccccatccaaacacactct 24273293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 23536121 - 23536065
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  23536121 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctta 23536065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8224822 - 8224764
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8224822 aattccctcaaaacattacattccctcaaaacattccctcatccaaacacactcttagg 8224764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15034764 - 15034818
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  15034764 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15034818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 49659270 - 49659214
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  49659270 aattccctcgtaacattacattccctcaatacatt-ccccatccaaacacactcttag 49659214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 4038129 - 4038073
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  4038129 aattccctcaaaacattacattccctcaaaacattcccccacccaaacacactctta 4038073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15034713 - 15034657
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  15034713 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 15034657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 26501098 - 26501154
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||||    
T  26501098 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctta 26501154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 30190252 - 30190295
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  30190252 aacattacattccctcaaaacattcccccatccaaacacactct 30190295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 43623008 - 43623055
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  43623008 aacattacattccatcaaaacattcccccatccaaacacactcttagg 43623055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34756481 - 34756427
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||| ||||    
T  34756481 aattccctcaaaacattacattccctcaaaacattcccccatccaaacactctct 34756427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 58
Target Start/End: Complemental strand, 5474457 - 5474414
Alignment:
Q  15 attacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||| |||||||||||||||||||||||||||||||||||||||    
T  5474457 attaaattccctcaaaacattcccccatccaaacacactcttag 5474414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 59
Target Start/End: Complemental strand, 15245495 - 15245456
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15245495 attccctcaaaacattcccccatccaaacacactcttagg 15245456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 45565448 - 45565397
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacac 52  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||||||    
T  45565448 aattccctcaaaacattacattctctcaaaacattcccccatccaaacacac 45565397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4038180 - 4038234
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  4038180 aattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 4038234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 6470705 - 6470759
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||| ||||||||||||| |||||||||||||||||    
T  6470705 aattccctcaaaacattacattctctcaaaacattccgccatccaaacacactct 6470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 27804319 - 27804269
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacaca 51  Q
    |||||||||  || |||||||||||||||||||||||||||||||||||||    
T  27804319 aattccctcaaaatattacattccctcaaaacattcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 29446804 - 29446746
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  ||||||||||||| ||||||||||||||| | ||||||||||||||||    
T  29446804 aattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactcttagg 29446746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 27804381 - 27804426
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||    
T  27804381 aacattacatttcctcaaaacattcctccatccaaacacactctta 27804426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 32287963 - 32288007
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctt 56  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||    
T  32287963 aacattacattccctcaaaactttcctccatccaaacacactctt 32288007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 40264135 - 40264187
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||||||||||    
T  40264135 aattccctcaaaacattacattacctcaaaatattcccccatccaaacacact 40264187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 27935601 - 27935648
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||||||| ||| | |||||||||||||||||||||    
T  27935601 aacattacattccctcaaaatatttctccatccaaacacactcttagg 27935648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 59
Target Start/End: Original strand, 28632615 - 28632662
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||| |||||||||| |||||||||||||| |||||    
T  28632615 aacattacattccctccaaacattccctcatccaaacacactattagg 28632662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 32572975 - 32572940
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  32572975 attccctcaaaacattcccccatccaaacacactct 32572940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 37036968 - 37037019
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacac 52  Q
    |||||||||  |||||||||||| |||||||||||||| |||||||||||||    
T  37036968 aattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 41823180 - 41823219
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  41823180 attccttcaaaacattcccccatccaaacacactcttagg 41823219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 44410354 - 44410311
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||| |||||||||| |||||||    
T  44410354 aacattacattccctcaaaacattctcccatccaaatacactct 44410311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 38277458 - 38277412
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||||||||||| |||| | |||||||||||||||||||    
T  38277458 aacattacattccctcaaaatattctctcatccaaacacactcttag 38277412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47165231 - 47165285
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||| |||||||||||| | |||||||||||||||||    
T  47165231 aattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactct 47165285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 50471803 - 50471765
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  50471803 attccctcaaaactttcccccatccaaacacactcttag 50471765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 31166353 - 31166308
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||  |||||||||||||| ||||||||||||||||||    
T  31166353 aacattacattatctcaaaacattccctcatccaaacacactctta 31166308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32573027 - 32573080
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactc 54  Q
    |||||||||  ||||||||||| |||||||| |||||||||||||| |||||||    
T  32573027 aattccctcaaaacattacattacctcaaaatattcccccatccaatcacactc 32573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 57
Target Start/End: Complemental strand, 40264083 - 40264046
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||||||||||| |||||||||||||||||    
T  40264083 attccctcaaaacattcccctatccaaacacactctta 40264046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 44410416 - 44410473
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  ||| ||||||| |||||||| ||||||| ||||||||||||||||||    
T  44410416 aattccctcaaaactttacattacctcaaaatattccccaatccaaacacactcttag 44410473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28745851 - 28745799
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  | |||||||||||||||||| ||||||||||||||| |||||    
T  28745851 aattccctcaaaccattacattccctcaaaatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 50005184 - 50005236
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||| |||||||| ||||| |||||||||||||||    
T  50005184 aattccctcaaaacattacattacctcaaaatattcctccatccaaacacact 50005236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 52
Target Start/End: Complemental strand, 51847895 - 51847855
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacac 52  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  51847895 aacattacattacctcaaaacattcctccatccaaacacac 51847855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 51
Target Start/End: Original strand, 23536173 - 23536204
Alignment:
Q  20 attccctcaaaacattcccccatccaaacaca 51  Q
    ||||||||||||||||||||||||||||||||    
T  23536173 attccctcaaaacattcccccatccaaacaca 23536204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 32128083 - 32128048
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||||||||||| |||||||||||    
T  32128083 attccctcaaaacattcccccatctaaacacactct 32128048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 34007441 - 34007480
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||| ||| |||||||||||||||||||||||    
T  34007441 attccctcaaaatatttccccatccaaacacactcttagg 34007480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 37214924 - 37214959
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37214924 attccctcaaaacattctcccatccaaacacactct 37214959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 45565500 - 45565539
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  45565500 attccctcaaaacattcttccatccaaacacactcttagg 45565539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 48953622 - 48953587
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||| ||||||||||||||||||||||||||||||    
T  48953622 attccttcaaaacattcccccatccaaacacactct 48953587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 46
Target Start/End: Complemental strand, 44570721 - 44570687
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaa 46  Q
    ||||||||||||||||||||||||| |||||||||    
T  44570721 aacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37448420 - 37448465
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaa 46  Q
    |||||||||  |||||||||||| |||||||||||||| |||||||    
T  37448420 aattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 50005122 - 50005077
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||||| ||||||| |||||  ||||||||||||||||||    
T  50005122 aacattacattctctcaaaatattccgtcatccaaacacactctta 50005077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 10166542 - 10166498
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctt 56  Q
    ||||||||||| || |||||||||| | |||||||||||||||||    
T  10166542 aacattacattaccacaaaacattctctcatccaaacacactctt 10166498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34756532 - 34756584
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||| ||| |||||||| ||| |||||||||||||||||    
T  34756532 aattccctcaaaacattatattacctcaaaatatttccccatccaaacacact 34756584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 38277520 - 38277571
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||| |||||||| ||| |||||||||||||||||    
T  38277520 aattccctcaaaacattacattacctcaaaatatt-ccccatccaaacacact 38277571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 6e-18; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6919812 - 6919870
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||    
T  6919812 aattccctcaaaacattactttccctcaaaacattcccccatccaaacacactcttagg 6919870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9285701 - 9285647
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  9285701 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 9285647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8574770 - 8574828
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  8574770 aattccctcaaaacattacattcactcaaaacatttccccatccaaacacactcttagg 8574828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 13487329 - 13487275
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||    
T  13487329 aattccctcataacactacattccctcaaaacattcccccatctaaacacactct 13487275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 28918208 - 28918162
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  28918208 aacattacattccctcaaaacattcctccatccaaacacactcttag 28918162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 34244999 - 34245053
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||||||||| |||||||||||||||||    
T  34244999 aattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 34245053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 33733472 - 33733432
Alignment:
Q  15 attacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  33733472 attacattccctcaaaacattcccccatccaaacacactct 33733432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 8574749 - 8574695
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||| ||||||||||| |||||||||||||||||||    
T  8574749 aattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 29889453 - 29889507
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  ||||||||||||| |||||||||||| |||||||||||||||||    
T  29889453 aattccctcaaaacattacattccatcaaaacattcctccatccaaacacactct 29889507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 58
Target Start/End: Complemental strand, 1195384 - 1195348
Alignment:
Q  22 tccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||||||||||||||||||||||||||||    
T  1195384 tccctcaaaacattcccccatccaaacacactcttag 1195348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 6919762 - 6919710
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||||||||||| |||||| |||||||||||||||    
T  6919762 aattccctcaaaacattacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9763066 - 9763014
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  |||||||||||||||||||||||| |||| ||||||||||||    
T  9763066 aattccctcaaaacattacattccctcaaaacatttccccttccaaacacact 9763014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9763117 - 9763173
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    |||||||||  ||||||||||| |||||||| ||||| |||||||||||||||||||    
T  9763117 aattccctcaaaacattacattacctcaaaatattcctccatccaaacacactctta 9763173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 776196 - 776242
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||    
T  776196 aacattacattccctcaaaacattttcctatccaaacacactcttag 776242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 8475214 - 8475176
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  8475214 attccctcaaaacatttccccatccaaacacactcttag 8475176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 1368517 - 1368477
Alignment:
Q  15 attacattccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  1368517 attacattctctcaaaacattcctccatccaaacacactct 1368477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 55
Target Start/End: Complemental strand, 776123 - 776080
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||||||||||||||||| | ||||| |||||||||||    
T  776123 aacattacattccctcaaaacatttctccatctaaacacactct 776080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 59
Target Start/End: Original strand, 9285753 - 9285792
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactcttagg 59  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  9285753 attccctcaaaacattccctcatctaaacacactcttagg 9285792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 15299541 - 15299579
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacaca 51  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  15299541 aacattacattccctcaaaacatt-ccccatccaaacaca 15299579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 510 - 562
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  510 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 459 - 402
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  459 aattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2083 - 2031
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  2083 aattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2134 - 2191
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttag 58  Q
    |||||||||  |||||||  ||||||||||| ||||||||||||||||||||||||||    
T  2134 aattccctcaaaacattattttccctcaaaatattcccccatccaaacacactcttag 2191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 42094 - 42139
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||    
T  42094 aacattacattccctcaaaacgttcccccatccaaacacactctta 42139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 42051 - 41997
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||||||||||||||||| |||| ||||||||||||    
T  42051 aattccctcaaaacattacattccctcaaaacattcctccattcaaacacactct 41997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 82997 - 82945
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  82997 aattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Original strand, 17605 - 17640
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  17605 attccctcaaaacattcccccatccaaacacactct 17640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 19241 - 19194
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||||||||||||| | ||||||||||||||||||| |||||    
T  19241 aacattacattccctcaaaatactcccccatccaaacacacttttagg 19194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 19815 - 19855
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  19815 aacattacattccctcaaaaca-tcccccatccaaacacact 19855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 55
Target Start/End: Complemental strand, 109084 - 109049
Alignment:
Q  20 attccctcaaaacattcccccatccaaacacactct 55  Q
    ||||||||||||||||||||||||||||||||||||    
T  109084 attccctcaaaacattcccccatccaaacacactct 109049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 4528 - 4570
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactc 54  Q
    ||||||| ||||||||||||||||||| |||||||||||||||    
T  4528 aacattatattccctcaaaacattccctcatccaaacacactc 4570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 54
Target Start/End: Original strand, 5172 - 5214
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacactc 54  Q
    ||||||| ||||||||||||||||||| |||||||||||||||    
T  5172 aacattatattccctcaaaacattccctcatccaaacacactc 5214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 2921 - 2867
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 55  Q
    |||||||||  |||||||||||| ||| ||||||||||||||| |||||||||||    
T  2921 aattccctcaaaacattacattctctcgaaacattcccccatctaaacacactct 2867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4129 - 4071
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactcttagg 59  Q
    |||||||||  |||||||||||| |||||||||||||   |||||||||||||||||||    
T  4129 aattccctcaaaacattacattctctcaaaacattcctttatccaaacacactcttagg 4071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 7194 - 7153
Alignment:
Q  12 aacattacattccctcaaaacattcccccatccaaacacact 53  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  7194 aacaatacattccctcaaaacattcctccatccaaacacact 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15883 - 15938
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||| ||| || |||||||||||| ||||||| |||||||||||||||||||||||    
T  15883 aattctctcatagcattacattccc-caaaacaatcccccatccaaacacactctta 15938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 2925 - 2980
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactctta 57  Q
    ||||| ||| || |||||||||||| ||||||| |||||||||||||||||||||||    
T  2925 aattctctcatagcattacattccc-caaaacaatcccccatccaaacacactctta 2980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 56379 - 56429
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacaca 51  Q
    |||||||||  |||||||| ||||||||||| |||||| ||||||||||||    
T  56379 aattccctcaaaacattactttccctcaaaatattccctcatccaaacaca 56429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10940 - 10887
Alignment:
Q  1 aattccctcgtaacattacattccctcaaaacattcccccatccaaacacactc 54  Q
    |||||||||  ||||||||||||||| |||||||||  |||| |||||||||||    
T  10940 aattccctcaaaacattacattcccttaaaacattcttccattcaaacacactc 10887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 3300 times since January 2019
Visitors: 6172