View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0857_low_101 (Length: 251)
Name: NF0857_low_101
Description: NF0857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0857_low_101 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 251
Target Start/End: Complemental strand, 26136875 - 26136635
Alignment:
| Q |
11 |
cagagatcatatacactacaattattataggtccaatttcaaagtacataaatatccttggtcctttacctcccgacctgtatacaggggcatctatatt |
110 |
Q |
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| T |
26136875 |
cagagatcatatacactacaattattatagttccaatttcaaagtacataaatatccttggtcctttacctcccaacctgtatacaggggcatctatatt |
26136776 |
T |
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| Q |
111 |
catccttttgtcggacaaagatgggaaaagtaacgggcacaaggattaattttaatatatgatctaataggactaacatgtagagcctaaatttaatgaa |
210 |
Q |
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| T |
26136775 |
cacccttttgtcggacaaagatgggaaaagtaatgggcacaaggattaattttaatatatgatttaataggactaacatgtagagcctaaatctaatgaa |
26136676 |
T |
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| Q |
211 |
tatattaatattattaaaatcattttagatttaaggcagat |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
26136675 |
tatattaatattattaaaatcattttagatttaaggcagat |
26136635 |
T |
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