View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0857_low_25 (Length: 430)

Name: NF0857_low_25
Description: NF0857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0857_low_25
NF0857_low_25
[»] chr8 (41 HSPs)
chr8 (1-304)||(38874584-38874887)
chr8 (2-127)||(12361131-12361256)
chr8 (2-124)||(10114429-10114550)
chr8 (2-127)||(28769345-28769470)
chr8 (56-124)||(27028824-27028892)
chr8 (4-85)||(1470904-1470985)
chr8 (1-85)||(4558736-4558820)
chr8 (40-124)||(8062501-8062585)
chr8 (4-83)||(31705025-31705105)
chr8 (69-125)||(35220731-35220787)
chr8 (2-81)||(787158-787237)
chr8 (65-124)||(43717946-43718005)
chr8 (97-219)||(7008633-7008753)
chr8 (3-85)||(31884534-31884616)
chr8 (27-85)||(34770856-34770914)
chr8 (28-124)||(2482830-2482924)
chr8 (28-85)||(6509351-6509408)
chr8 (2-127)||(11795031-11795156)
chr8 (45-89)||(7514560-7514604)
chr8 (2-82)||(42597340-42597420)
chr8 (40-127)||(30013195-30013282)
chr8 (65-124)||(30251463-30251522)
chr8 (50-93)||(35869824-35869867)
chr8 (2-85)||(41620339-41620422)
chr8 (43-85)||(9834837-9834879)
chr8 (235-281)||(14926893-14926939)
chr8 (73-131)||(21653091-21653149)
chr8 (28-78)||(29262929-29262979)
chr8 (235-273)||(42215219-42215257)
chr8 (30-91)||(6864501-6864562)
chr8 (39-84)||(7645954-7645999)
chr8 (234-279)||(9700113-9700158)
chr8 (50-115)||(9956832-9956897)
chr8 (30-115)||(11376670-11376755)
chr8 (7-124)||(31862437-31862554)
chr8 (4-85)||(34080314-34080395)
chr8 (69-122)||(44236834-44236887)
chr8 (59-155)||(6966881-6966976)
chr8 (174-218)||(31884856-31884900)
chr8 (247-283)||(34769427-34769463)
chr8 (235-283)||(35534522-35534570)
[»] chr5 (56 HSPs)
chr5 (2-124)||(39105403-39105525)
chr5 (2-203)||(32172592-32172792)
chr5 (2-124)||(9202757-9202879)
chr5 (2-80)||(32059642-32059719)
chr5 (27-108)||(12425535-12425616)
chr5 (3-131)||(36796708-36796836)
chr5 (65-124)||(4014433-4014492)
chr5 (27-152)||(10272413-10272537)
chr5 (16-85)||(14295459-14295528)
chr5 (2-85)||(26209461-26209543)
chr5 (10-123)||(37588370-37588483)
chr5 (50-118)||(28776980-28777048)
chr5 (8-87)||(9703286-9703365)
chr5 (2-85)||(38047903-38047986)
chr5 (50-124)||(2568645-2568719)
chr5 (44-110)||(7319387-7319453)
chr5 (40-110)||(35553211-35553281)
chr5 (69-155)||(41052874-41052959)
chr5 (59-124)||(7984965-7985030)
chr5 (234-279)||(9174928-9174973)
chr5 (42-91)||(12975326-12975375)
chr5 (10-123)||(37526209-37526322)
chr5 (3-123)||(37690646-37690767)
chr5 (44-124)||(1619071-1619150)
chr5 (2-86)||(18704083-18704166)
chr5 (1-86)||(35135713-35135794)
chr5 (56-124)||(41981874-41981942)
chr5 (45-124)||(6587116-6587195)
chr5 (97-216)||(11297114-11297232)
chr5 (13-84)||(12595789-12595860)
chr5 (2-85)||(16889674-16889757)
chr5 (220-267)||(31723903-31723950)
chr5 (160-215)||(36326104-36326159)
chr5 (44-127)||(41957457-41957540)
chr5 (234-264)||(1899265-1899295)
chr5 (57-99)||(4620187-4620229)
chr5 (69-127)||(7319014-7319072)
chr5 (177-215)||(9174929-9174967)
chr5 (70-124)||(10639960-10640014)
chr5 (2-88)||(15402874-15402960)
chr5 (65-115)||(24030419-24030469)
chr5 (9-63)||(32969187-32969241)
chr5 (247-285)||(34736434-34736472)
chr5 (234-279)||(8651265-8651310)
chr5 (117-202)||(11457152-11457236)
chr5 (176-217)||(16937800-16937841)
chr5 (40-85)||(34205216-34205261)
chr5 (56-121)||(40119880-40119945)
chr5 (27-88)||(40120084-40120145)
chr5 (174-218)||(6938649-6938693)
chr5 (235-279)||(7705911-7705955)
chr5 (42-86)||(19138766-19138810)
chr5 (56-104)||(32942611-32942659)
chr5 (4-135)||(40205072-40205201)
chr5 (27-91)||(41277392-41277456)
chr5 (65-133)||(42582914-42582982)
[»] chr7 (53 HSPs)
chr7 (27-124)||(40688995-40689092)
chr7 (1-179)||(48157075-48157252)
chr7 (43-139)||(38010694-38010790)
chr7 (44-120)||(47177617-47177693)
chr7 (28-115)||(12110325-12110412)
chr7 (27-110)||(27548227-27548310)
chr7 (2-124)||(28165030-28165152)
chr7 (65-122)||(20526448-20526505)
chr7 (1-121)||(39505895-39506014)
chr7 (50-124)||(47510116-47510190)
chr7 (50-114)||(6263382-6263446)
chr7 (40-108)||(44821936-44822004)
chr7 (1-84)||(1417202-1417285)
chr7 (174-217)||(24363517-24363560)
chr7 (65-124)||(48470046-48470105)
chr7 (27-85)||(28340892-28340950)
chr7 (16-85)||(21453247-21453316)
chr7 (27-115)||(46825062-46825151)
chr7 (3-127)||(7623078-7623202)
chr7 (221-281)||(23214954-23215014)
chr7 (27-107)||(30456476-30456556)
chr7 (27-83)||(31002725-31002781)
chr7 (56-123)||(752962-753029)
chr7 (6-85)||(992013-992092)
chr7 (40-91)||(24909641-24909692)
chr7 (2-89)||(34441028-34441115)
chr7 (65-108)||(43648242-43648285)
chr7 (56-115)||(45790443-45790502)
chr7 (30-85)||(47046156-47046211)
chr7 (65-127)||(6601369-6601431)
chr7 (1-107)||(27481320-27481426)
chr7 (65-123)||(33128755-33128813)
chr7 (7-61)||(39591539-39591593)
chr7 (1-79)||(49060478-49060556)
chr7 (3-84)||(5006558-5006639)
chr7 (40-85)||(5369739-5369784)
chr7 (1-86)||(23918895-23918980)
chr7 (59-108)||(33678776-33678825)
chr7 (235-280)||(34083520-34083565)
chr7 (41-86)||(39518807-39518852)
chr7 (56-121)||(46280284-46280349)
chr7 (40-153)||(46609074-46609186)
chr7 (237-273)||(5010390-5010426)
chr7 (1-57)||(8680930-8680986)
chr7 (1-85)||(22759124-22759208)
chr7 (50-122)||(30535550-30535622)
chr7 (172-212)||(32410648-32410688)
chr7 (2-70)||(35536046-35536114)
chr7 (72-124)||(36517588-36517640)
chr7 (27-115)||(37064482-37064570)
chr7 (247-279)||(40371567-40371599)
chr7 (237-273)||(40598404-40598440)
chr7 (65-105)||(47559629-47559669)
[»] chr2 (71 HSPs)
chr2 (27-215)||(11513862-11514047)
chr2 (44-124)||(18066109-18066189)
chr2 (43-139)||(22681179-22681275)
chr2 (50-202)||(15377752-15377903)
chr2 (50-127)||(18179246-18179323)
chr2 (2-81)||(2416252-2416331)
chr2 (2-85)||(10143111-10143194)
chr2 (44-106)||(8017415-8017477)
chr2 (6-111)||(41875675-41875780)
chr2 (27-127)||(6993730-6993830)
chr2 (40-84)||(29643465-29643509)
chr2 (27-115)||(42457912-42458000)
chr2 (235-282)||(2416426-2416473)
chr2 (2-85)||(17952749-17952832)
chr2 (27-121)||(12464485-12464579)
chr2 (160-218)||(15370239-15370297)
chr2 (102-216)||(32821848-32821961)
chr2 (14-124)||(36043855-36043965)
chr2 (7-108)||(656802-656903)
chr2 (58-111)||(6167305-6167358)
chr2 (4-81)||(23143030-23143107)
chr2 (4-81)||(23554820-23554897)
chr2 (44-85)||(25800810-25800851)
chr2 (50-123)||(39983329-39983402)
chr2 (27-123)||(9395094-9395190)
chr2 (65-117)||(26143656-26143708)
chr2 (44-124)||(26626854-26626934)
chr2 (28-124)||(28039341-28039437)
chr2 (44-124)||(29316784-29316864)
chr2 (171-219)||(33503105-33503153)
chr2 (56-124)||(40279190-40279258)
chr2 (44-115)||(680484-680555)
chr2 (1-60)||(3423841-3423900)
chr2 (69-124)||(3611232-3611287)
chr2 (28-126)||(7103489-7103588)
chr2 (65-124)||(9174817-9174876)
chr2 (238-273)||(9395245-9395280)
chr2 (160-203)||(14302918-14302961)
chr2 (56-91)||(33931612-33931647)
chr2 (27-82)||(42592303-42592358)
chr2 (56-115)||(42621393-42621452)
chr2 (27-85)||(5043608-5043666)
chr2 (247-281)||(6772444-6772478)
chr2 (174-216)||(10285970-10286012)
chr2 (69-123)||(33319822-33319876)
chr2 (235-281)||(35378443-35378489)
chr2 (235-273)||(37448696-37448734)
chr2 (65-127)||(40279409-40279471)
chr2 (27-85)||(43141835-43141893)
chr2 (59-124)||(1893290-1893355)
chr2 (7-127)||(1939338-1939458)
chr2 (27-108)||(10646314-10646395)
chr2 (42-107)||(13869121-13869186)
chr2 (50-91)||(16353848-16353889)
chr2 (65-122)||(16398116-16398173)
chr2 (4-85)||(28933765-28933846)
chr2 (16-73)||(31740019-31740076)
chr2 (2-118)||(34339845-34339961)
chr2 (72-153)||(34652017-34652097)
chr2 (67-124)||(35378541-35378598)
chr2 (56-124)||(750664-750731)
chr2 (50-126)||(938517-938593)
chr2 (16-124)||(1493522-1493630)
chr2 (44-124)||(1625881-1625961)
chr2 (234-274)||(3458707-3458747)
chr2 (9-85)||(6988061-6988137)
chr2 (1-81)||(35755554-35755634)
chr2 (5-81)||(39567845-39567921)
chr2 (174-218)||(40759270-40759314)
chr2 (178-218)||(42868397-42868437)
chr2 (5-85)||(43199356-43199436)
[»] chr3 (59 HSPs)
chr3 (69-202)||(37273140-37273272)
chr3 (72-219)||(45541580-45541726)
chr3 (3-80)||(1395611-1395688)
chr3 (42-215)||(2923457-2923629)
chr3 (7-124)||(32095200-32095317)
chr3 (27-124)||(36783343-36783440)
chr3 (140-216)||(25459548-25459624)
chr3 (70-138)||(33972729-33972797)
chr3 (56-123)||(44747418-44747485)
chr3 (57-120)||(50600191-50600254)
chr3 (72-122)||(466202-466252)
chr3 (27-93)||(2201092-2201158)
chr3 (28-110)||(14145877-14145959)
chr3 (1-87)||(37788799-37788884)
chr3 (58-127)||(2719463-2719532)
chr3 (77-218)||(4534291-4534431)
chr3 (44-121)||(21367648-21367725)
chr3 (5-90)||(24235726-24235811)
chr3 (50-103)||(33405197-33405250)
chr3 (6-126)||(34254815-34254936)
chr3 (177-218)||(51929854-51929895)
chr3 (6-133)||(21862175-21862303)
chr3 (1-85)||(38462219-38462303)
chr3 (44-124)||(52618984-52619064)
chr3 (45-108)||(5436241-5436304)
chr3 (72-127)||(16790384-16790439)
chr3 (9-80)||(23952159-23952230)
chr3 (22-89)||(37689428-37689495)
chr3 (65-215)||(41633362-41633509)
chr3 (65-135)||(2128256-2128326)
chr3 (8-82)||(10101527-10101601)
chr3 (8-82)||(10212452-10212526)
chr3 (28-86)||(23315591-23315649)
chr3 (7-85)||(24887331-24887409)
chr3 (58-124)||(28622008-28622074)
chr3 (66-108)||(32582747-32582789)
chr3 (1-83)||(43116478-43116560)
chr3 (2-84)||(48364928-48365010)
chr3 (235-277)||(50760704-50760746)
chr3 (235-272)||(584159-584196)
chr3 (244-273)||(9832674-9832703)
chr3 (50-115)||(14548739-14548804)
chr3 (50-91)||(21865563-21865604)
chr3 (50-126)||(25182994-25183071)
chr3 (56-121)||(30443886-30443951)
chr3 (27-107)||(46886718-46886796)
chr3 (234-271)||(48364834-48364871)
chr3 (234-271)||(48807811-48807848)
chr3 (177-218)||(53762310-53762351)
chr3 (70-126)||(901931-901987)
chr3 (139-215)||(3775770-3775846)
chr3 (1-61)||(4990629-4990689)
chr3 (45-85)||(20874352-20874392)
chr3 (56-124)||(20880469-20880537)
chr3 (41-85)||(21872319-21872363)
chr3 (56-108)||(39602235-39602287)
chr3 (247-279)||(43046789-43046821)
chr3 (161-225)||(43948751-43948815)
chr3 (234-278)||(51929853-51929897)
[»] chr1 (73 HSPs)
chr1 (10-127)||(4622040-4622157)
chr1 (5-84)||(49517012-49517091)
chr1 (1-86)||(48830123-48830208)
chr1 (1-127)||(44032005-44032131)
chr1 (31-124)||(9656618-9656711)
chr1 (56-124)||(7137007-7137075)
chr1 (27-131)||(7218076-7218180)
chr1 (27-202)||(31517672-31517846)
chr1 (27-124)||(16322813-16322910)
chr1 (27-115)||(23544657-23544746)
chr1 (51-124)||(28482242-28482315)
chr1 (22-127)||(30371107-30371212)
chr1 (27-124)||(51695504-51695600)
chr1 (8-124)||(10199417-10199533)
chr1 (56-124)||(27820346-27820414)
chr1 (56-124)||(34290229-34290297)
chr1 (65-125)||(35179141-35179201)
chr1 (56-124)||(45975683-45975751)
chr1 (50-217)||(6231733-6231899)
chr1 (2-85)||(17269189-17269272)
chr1 (40-91)||(25006076-25006127)
chr1 (40-86)||(15361690-15361736)
chr1 (27-85)||(27738228-27738286)
chr1 (22-84)||(28467356-28467418)
chr1 (235-273)||(42556525-42556563)
chr1 (65-110)||(4576807-4576852)
chr1 (24-85)||(33204436-33204497)
chr1 (65-122)||(39603842-39603899)
chr1 (27-120)||(49888731-49888824)
chr1 (40-124)||(6292470-6292554)
chr1 (160-215)||(12763419-12763475)
chr1 (28-124)||(24915060-24915156)
chr1 (7-115)||(25479525-25479633)
chr1 (51-127)||(27963376-27963452)
chr1 (50-127)||(28689458-28689537)
chr1 (55-115)||(38867849-38867909)
chr1 (14-74)||(49365818-49365878)
chr1 (235-282)||(11695975-11696021)
chr1 (1-68)||(15360832-15360899)
chr1 (51-122)||(25944420-25944491)
chr1 (2-81)||(33527199-33527278)
chr1 (72-115)||(38189773-38189816)
chr1 (52-127)||(39270431-39270506)
chr1 (27-85)||(1255479-1255537)
chr1 (57-127)||(2294905-2294975)
chr1 (1-123)||(4200167-4200289)
chr1 (139-213)||(4549462-4549536)
chr1 (27-85)||(5421968-5422026)
chr1 (68-122)||(16144981-16145035)
chr1 (40-122)||(25005808-25005890)
chr1 (237-275)||(28467548-28467586)
chr1 (176-218)||(37631475-37631517)
chr1 (69-123)||(41195203-41195257)
chr1 (27-112)||(1432479-1432564)
chr1 (56-213)||(2777885-2778040)
chr1 (27-84)||(5592734-5592791)
chr1 (51-124)||(6774976-6775048)
chr1 (2-115)||(7472251-7472363)
chr1 (72-121)||(7941615-7941664)
chr1 (234-271)||(24279861-24279898)
chr1 (44-121)||(26630444-26630521)
chr1 (54-115)||(27887136-27887197)
chr1 (235-271)||(1662686-1662722)
chr1 (27-115)||(4548685-4548773)
chr1 (30-86)||(10581124-10581180)
chr1 (7-127)||(11211062-11211182)
chr1 (176-216)||(11695974-11696014)
chr1 (50-218)||(17420190-17420356)
chr1 (2-78)||(29007771-29007847)
chr1 (235-267)||(29723602-29723634)
chr1 (1-89)||(32958590-32958678)
chr1 (56-124)||(42174848-42174916)
chr1 (50-110)||(44422686-44422746)
[»] chr4 (59 HSPs)
chr4 (2-123)||(6364088-6364209)
chr4 (27-115)||(42685388-42685476)
chr4 (28-127)||(2996538-2996637)
chr4 (27-214)||(23459592-23459777)
chr4 (17-125)||(11802488-11802596)
chr4 (56-124)||(17822874-17822942)
chr4 (6-85)||(49219082-49219161)
chr4 (69-202)||(28615529-28615662)
chr4 (44-123)||(20031730-20031810)
chr4 (27-115)||(51630075-51630163)
chr4 (16-100)||(53626729-53626813)
chr4 (57-112)||(942129-942184)
chr4 (6-81)||(8130117-8130192)
chr4 (50-139)||(9841053-9841141)
chr4 (56-115)||(16199999-16200058)
chr4 (2-89)||(24160929-24161016)
chr4 (27-214)||(44319913-44320099)
chr4 (236-279)||(44638139-44638182)
chr4 (2-128)||(27043835-27043961)
chr4 (16-114)||(52735075-52735173)
chr4 (16-85)||(4071835-4071904)
chr4 (2-107)||(26883934-26884039)
chr4 (65-122)||(55302251-55302308)
chr4 (71-115)||(825508-825552)
chr4 (1-85)||(35958593-35958677)
chr4 (27-110)||(437455-437538)
chr4 (45-124)||(1706604-1706683)
chr4 (247-282)||(10205851-10205886)
chr4 (172-215)||(22796763-22796806)
chr4 (50-93)||(24444025-24444068)
chr4 (147-202)||(25487489-25487544)
chr4 (7-82)||(36460530-36460605)
chr4 (44-127)||(40174544-40174627)
chr4 (44-87)||(52754581-52754624)
chr4 (97-216)||(53315360-53315478)
chr4 (27-85)||(3175915-3175973)
chr4 (44-110)||(29778776-29778842)
chr4 (2-127)||(30338597-30338723)
chr4 (50-108)||(35571656-35571714)
chr4 (2-80)||(45128363-45128441)
chr4 (27-85)||(54325085-54325143)
chr4 (174-215)||(10172172-10172213)
chr4 (40-81)||(24091440-24091481)
chr4 (2-63)||(30024639-30024700)
chr4 (45-106)||(32421087-32421148)
chr4 (235-264)||(34430626-34430655)
chr4 (50-123)||(36048520-36048593)
chr4 (65-110)||(52315220-52315265)
chr4 (6-63)||(54327519-54327576)
chr4 (3-115)||(3155543-3155655)
chr4 (177-213)||(3637299-3637335)
chr4 (27-107)||(9760404-9760484)
chr4 (28-84)||(13949893-13949949)
chr4 (16-124)||(17884021-17884129)
chr4 (1-85)||(23819028-23819111)
chr4 (27-91)||(30581719-30581783)
chr4 (176-216)||(35571549-35571589)
chr4 (27-115)||(47118983-47119071)
chr4 (56-108)||(49202638-49202690)
[»] chr6 (47 HSPs)
chr6 (7-127)||(4246354-4246474)
chr6 (2-124)||(24476541-24476663)
chr6 (2-215)||(7148606-7148817)
chr6 (2-86)||(29274276-29274360)
chr6 (65-216)||(8010359-8010509)
chr6 (2-127)||(4006653-4006778)
chr6 (2-115)||(9093574-9093687)
chr6 (16-133)||(24782012-24782129)
chr6 (22-85)||(281896-281959)
chr6 (22-124)||(2735028-2735130)
chr6 (242-279)||(29249513-29249550)
chr6 (148-221)||(31461756-31461829)
chr6 (27-115)||(31671092-31671180)
chr6 (1-85)||(32975916-32976000)
chr6 (176-219)||(103542-103585)
chr6 (40-79)||(5550109-5550148)
chr6 (1-60)||(24836272-24836331)
chr6 (65-124)||(34430470-34430529)
chr6 (65-115)||(835267-835317)
chr6 (22-84)||(2027455-2027517)
chr6 (72-202)||(2455819-2455948)
chr6 (27-156)||(4420609-4420735)
chr6 (2-215)||(8420115-8420328)
chr6 (26-92)||(9604812-9604878)
chr6 (27-81)||(14492266-14492320)
chr6 (29-71)||(27615335-27615377)
chr6 (28-78)||(27693494-27693544)
chr6 (58-124)||(31624085-31624151)
chr6 (1-91)||(33787787-33787877)
chr6 (27-116)||(837233-837322)
chr6 (16-85)||(1402949-1403018)
chr6 (27-115)||(7785762-7785848)
chr6 (22-127)||(9667991-9668096)
chr6 (102-135)||(27924601-27924634)
chr6 (58-135)||(28641747-28641824)
chr6 (176-216)||(835179-835219)
chr6 (56-124)||(3201956-3202024)
chr6 (235-271)||(5977042-5977078)
chr6 (56-108)||(9109276-9109328)
chr6 (2-122)||(9559553-9559672)
chr6 (174-218)||(12111077-12111121)
chr6 (235-267)||(12111080-12111112)
chr6 (45-85)||(24838791-24838831)
chr6 (56-120)||(24982698-24982762)
chr6 (27-63)||(27713471-27713507)
chr6 (235-267)||(31338090-31338122)
chr6 (76-124)||(31813174-31813222)
[»] scaffold0024 (2 HSPs)
scaffold0024 (2-90)||(27515-27603)
scaffold0024 (65-114)||(21304-21353)
[»] scaffold0221 (1 HSPs)
scaffold0221 (65-122)||(22233-22290)
[»] scaffold0349 (1 HSPs)
scaffold0349 (27-63)||(18437-18473)
[»] scaffold0100 (1 HSPs)
scaffold0100 (2-86)||(42556-42639)


Alignment Details
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 38874584 - 38874887
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  38874584 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggagaacatatg 38874683  T
Q  101 aaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaat 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38874684 aaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaat 38874783  T
Q  201 aaaacaatccaaacaggcttagtctcattggtctttatgctagtaaataagctcaaataagtcaatctaaacatgccctaattggttattttgttgatga 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  38874784 aaaacaatccaaacaggcttagtctcattggtctttatgctagtaaataagctcaaataagtcaatctaaacatgccctaattggttattttgttaatgc 38874883  T
Q  301 tgtc 304  Q
    ||||    
T  38874884 tgtc 38874887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 12361131 - 12361256
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    |||| |||||||| ||||| ||| ||||||||||||  ||||||||| |||||||||||||| ||||||||||||||||| ||||  ||| | |  |||     
T  12361131 ttatatataagttatttctataaataaagataaaatgaagtcaaattgttttcatataagctataagctgttttcataagttattcaggagagctaatgg 12361230  T
Q  102 aaataagctaaaaatagcttatggac 127  Q
    ||||||| | |||| |||||||||||    
T  12361231 aaataagttgaaaacagcttatggac 12361256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 10114429 - 10114550
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||| | ||||| || | |||||||||||  |||  |||| ||||  |||||||| |||||||||||||| |||||| ||||| |||||||||    
T  10114429 ttatgtataagctatttctatagcaaaagataaaata-agttgaattgttttggtataagctataagctgttttcattagctatattggagaacatatga 10114527  T
Q  102 aaataagctaaaaatagcttatg 124  Q
    ||||||||| |||| ||| ||||    
T  10114528 aaataagctgaaaacagcatatg 10114550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 28769470 - 28769345
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||| | || || |||| ||  |||||||  ||||||| | ||||| |||||||| ||||||||||||||||||||||||||| |   ||||     
T  28769470 ttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataagctattttggagagtttatgg 28769371  T
Q  102 aaataagctaaaaatagcttatggac 127  Q
    ||||||||| |||| | |||||||||    
T  28769370 aaataagctgaaaacaacttatggac 28769345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 27028824 - 27028892
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||| ||| ||||||||||||||||||||| ||||| | | |||||||||||||| |||||||||||||    
T  27028824 tatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatg 27028892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 1470985 - 1470904
Alignment:
Q  4 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||| | ||||| |||  |||||||||||  |||||||||  ||||||||||||| |||||||||||||||| ||||    
T  1470985 atgtataagctatttctataataaaagataaaataaagtcaaattactttcatataagctataagctgttttcataacctat 1470904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 4558736 - 4558820
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||| | ||||| |||  |||||||||||  ||| ||||| |||||||||| ||| |||||||||| ||||||||||    
T  4558736 tttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctat 4558820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 8062501 - 8062585
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||| |||||||||||||| |||| |||| ||||||||||| || || |   ||||||||||||||  ||||||||||||    
T  8062501 agtcaaattgttttcatataagctataagatgttctcataagctatcttagagagtttatgaaaataagctggaaatagcttatg 8062585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 4 - 83
Target Start/End: Original strand, 31705025 - 31705105
Alignment:
Q  4 atgtataagttgtttctgtaactaaagataaaatcgagtcaaatt-cttttcatataagctctaagctgttttcataagct 83  Q
    ||||||||| | ||||||||   ||||||||||||  |||||||| | ||||||||||||| |||||||||||||||||||    
T  31705025 atgtataagctatttctgtactaaaagataaaatcatgtcaaattacgtttcatataagctataagctgttttcataagct 31705105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 69 - 125
Target Start/End: Complemental strand, 35220787 - 35220731
Alignment:
Q  69 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgg 125  Q
    |||||||||||||||||| |||| | | ||| |||||||||||||||||||||||||    
T  35220787 ctgttttcataagctattctggagagcttataaaaataagctaaaaatagcttatgg 35220731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 787237 - 787158
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 81  Q
    |||||| |||| |||||| |||||  ||||||||||  ||||||||| || ||||||||||| ||| |||||||||||||    
T  787237 ttatgtttaagctgtttccgtaacataagataaaataaagtcaaattgttatcatataagctataaactgttttcataag 787158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 43718005 - 43717946
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||||| |||||||||| ||||| ||| ||||||| ||||||||||| ||||||||    
T  43718005 taagctgtttgcataagctatcttggagaacttatgaaagtaagctaaaaacagcttatg 43717946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 7008633 - 7008753
Alignment:
Q  97 tatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctc 196  Q
    ||||||||||||||||||||| |||| |||| ||| ||| | |||||||||||||||||    ||| |||| || | ||||||||| | ||||||| |||    
T  7008633 tatgaaaataagctaaaaatatcttaaggacatgtcata-ggttgtttctataagctctctctaac-gtctcacaagtgcttatgccagtagataaactc 7008730  T
Q  197 aaataaaacaatccaaacaggct 219  Q
    ||||||  |||| ||||||||||    
T  7008731 aaataagtcaattcaaacaggct 7008753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 85
Target Start/End: Original strand, 31884534 - 31884616
Alignment:
Q  3 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||| ||||| |||| ||| |||||||| | |  |||| |||||||||||||| |||  ||||||||||||||||    
T  31884534 tatgtataagttatttctataacaaaatataaaatcaaattgaattgttttcatataagctataaattgttttcataagctat 31884616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 34770856 - 34770914
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||  ||||||||| ||||||| |||||| |||| ||||||||||||||||    
T  34770856 aaagataaaataaagtcaaattgttttcatttaagctataagttgttttcataagctat 34770914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 2482830 - 2482924
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||||  ||||||| | ||||  |||||||| ||||||||||||||  ||||| ||||||||| |||  ||||||||| |||| ||||||||    
T  2482830 aagataaaataaagtcaaaatgtttttgtataagctataagctgttttcat--gctatcttggataacttatagaaataagctgaaaacagcttatg 2482924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 85
Target Start/End: Complemental strand, 6509408 - 6509351
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||||  ||||||||| | || ||||||||| |||||||||||||||||||||    
T  6509408 aagataaaataaagtcaaattgtatttatataagctataagctgttttcataagctat 6509351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 11795031 - 11795156
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||| | ||||| | || ||| ||| |||  ||||| | | |||||||||||| | ||||||| |||||||||||||| |||| | | ||||     
T  11795031 ttatgtataagctttttctatgacaaaacatacaataaagtcacactgttttcatataagttataagctgatttcataagctattatggagagcttatgg 11795130  T
Q  102 aaataagctaaaaatagcttatggac 127  Q
    ||||||||| |||| || ||||||||    
T  11795131 aaataagctgaaaacaggttatggac 11795156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 7514560 - 7514604
Alignment:
Q  45 aattcttttcatataagctctaagctgttttcataagctattttg 89  Q
    |||| ||||||||||||||  ||||||||||||||||||||||||    
T  7514560 aattgttttcatataagctacaagctgttttcataagctattttg 7514604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 82
Target Start/End: Original strand, 42597340 - 42597420
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 82  Q
    ||||||||||| | ||||| |||| |||||||||||  ||| ||||| |||||||  ||||| |||| |||||||||||||    
T  42597340 ttatgtataagctatttctataacaaaagataaaataaagtaaaattgttttcatgcaagctataagttgttttcataagc 42597420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 30013195 - 30013282
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    ||||||| | ||| |||||||||| |||||||||||||||||||||  || | |||  ||| ||||||||| ||||||| ||| ||||    
T  30013195 agtcaaactgtttccatataagctataagctgttttcataagctatcctgtagaactaatggaaataagctgaaaatagtttagggac 30013282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 30251522 - 30251463
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||||||||||||||| |||||  || ||||||||||||||  ||| ||||||||    
T  30251522 taagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatg 30251463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 35869824 - 35869867
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggata 93  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||    
T  35869824 ttttcatataagctataagttgttttcataagctattgtggata 35869867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 41620422 - 41620339
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||| |||||||| ||| |||||| |||||||||||  ||||||||| | ||||||||  ||  |||||||||| |||||||||    
T  41620422 ttatatataagttatttttgtaacaaaagataaaataaagtcaaattatgttcatatattctaaaagctgtttttataagctat 41620339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 9834879 - 9834837
Alignment:
Q  43 caaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||| |||||||||||||| |||| ||||||||||||||||    
T  9834879 caaattgttttcatataagctataagttgttttcataagctat 9834837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 14926939 - 14926893
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaacatgccctaa 281  Q
    |||||| |||||||||| ||||||||||||||| ||||| |||||||    
T  14926939 ttatgccagtaaataagttcaaataagtcaatccaaacaagccctaa 14926893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 73 - 131
Target Start/End: Original strand, 21653091 - 21653149
Alignment:
Q  73 tttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgt 131  Q
    |||||| |||||| ||||| | | |||||||||||||| ||||||||||||| ||||||    
T  21653091 tttcattagctatcttggagagcttatgaaaataagctgaaaatagcttatgaacgtgt 21653149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 29262979 - 29262929
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcat 78  Q
    ||||||||||  ||||||||| |||||||||||||| ||||||| ||||||    
T  29262979 aagataaaataaagtcaaattattttcatataagctgtaagctgatttcat 29262929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 42215257 - 42215219
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaaca 273  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  42215257 ttatgccagtaaataagctcaaataagttaatctaaaca 42215219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 6864562 - 6864501
Alignment:
Q  30 gataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttgga 91  Q
    ||||||||  ||||||| | ||||||| |||| | |||| ||||||||||||||||||||||    
T  6864562 gataaaataaagtcaaactattttcatgtaagttataagttgttttcataagctattttgga 6864501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 84
Target Start/End: Original strand, 7645954 - 7645999
Alignment:
Q  39 gagtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    |||||||||| ||||||| |||||| |||| |||||||||||||||    
T  7645954 gagtcaaattgttttcatgtaagctataagttgttttcataagcta 7645999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 9700113 - 9700158
Alignment:
Q  234 tttatgctagtaaataagctcaaataagtcaatctaaacatgccct 279  Q
    |||||||||||| |||||||||||||||| |||| ||||| |||||    
T  9700113 tttatgctagtagataagctcaaataagttaatccaaacaggccct 9700158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 9956897 - 9956832
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||| |||||| | |||| ||||||||||| |||| ||||| ||| |||||||||||||| ||||    
T  9956897 ttttcctataagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaa 9956832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 11376670 - 11376755
Alignment:
Q  30 gataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||||||  |||| |||| |||| ||||||||| |||| || |||| ||||||||||| || ||  |||||||||||||| ||||    
T  11376670 gataaaataaagtctaattattttgatataagctataagatgctttcttaagctattttagagaatctatgaaaataagctgaaaa 11376755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 31862437 - 31862554
Alignment:
Q  7 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 106  Q
    |||||||| ||||  |||| |||||||| ||  ||||||| | || || |||||||| |||| |||||||||||| |||  | || | | ||||||||||    
T  31862437 tataagttatttcaataacaaaagataatataaagtcaaactattctcgtataagctataagatgttttcataagttatcctagagagcttatgaaaata 31862536  T
Q  107 agctaaaaatagcttatg 124  Q
    |||| |||| ||||||||    
T  31862537 agctgaaaacagcttatg 31862554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Complemental strand, 34080395 - 34080314
Alignment:
Q  4 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||| | ||||| |||| |||||||||||  ||||||| | ||  | |||||||| ||||||||||||||| |||||    
T  34080395 atgtataagctatttctttaacaaaagataaaatgaagtcaaactgttaccgtataagctataagctgttttcatacgctat 34080314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 122
Target Start/End: Complemental strand, 44236887 - 44236834
Alignment:
Q  69 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    ||||||||||||||||| ||||| | | |||||||||||||| |||||| ||||    
T  44236887 ctgttttcataagctatattggagagcttatgaaaataagctgaaaataactta 44236834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 59 - 155
Target Start/End: Original strand, 6966881 - 6966976
Alignment:
Q  59 aagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctct 155  Q
    ||||| |||||||||||||| ||| || ||||  | | |||||||||||||  |||||||||||  ||| ||||||| | ||||||| |||||||||    
T  6966881 aagctataagctgttttcattagccatcttggggagcttatgaaaataagcggaaaatagcttaatgacatgttataag-ttgtttcaataagctct 6966976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 31884900 - 31884856
Alignment:
Q  174 tgcttatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    ||||||||||| |||||||||||||||||  |||||||| |||||    
T  31884900 tgcttatgctagtagataagctcaaataacgcaatccaagcaggc 31884856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 283
Target Start/End: Complemental strand, 34769463 - 34769427
Alignment:
Q  247 ataagctcaaataagtcaatctaaacatgccctaatt 283  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  34769463 ataagctcaaatatgtcaatccaaacatgccctaatt 34769427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 35534570 - 35534522
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaacatgccctaatt 283  Q
    ||||| ||||| |||||||||||||||||| |||||||| |||| ||||    
T  35534570 ttatgttagtagataagctcaaataagtcattctaaacaggccccaatt 35534522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 39105403 - 39105525
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||| | ||||| || ||||| || ||||  ||| ||||| ||||| |||||||| ||| ||||||||||||||||| ||||| ||| |||||    
T  39105403 ttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatga 39105502  T
Q  102 aaataagctaaaaatagcttatg 124  Q
    |||||||||||||||||||||||    
T  39105503 aaataagctaaaaatagcttatg 39105525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 2 - 203
Target Start/End: Original strand, 32172592 - 32172792
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||  | |||||  ||| |||||||||||  |||||| || ||| |||||||||| |||||||||||||||||||||  || | |||  |||     
T  32172592 ttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatcatgaagaactaatgg 32172691  T
Q  102 aaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaata 201  Q
    ||||||||| ||||| |||||||||| ||| ||| | ||||||| ||||||||| |  |||  ||| || | ||||||||||| || |||||||||||||    
T  32172692 aaataagctgaaaatggcttatggacatgtcataag-ttgtttccataagctctcccaaactatctcacaagtgcttatgctagtatataagctcaaata 32172790  T
Q  202 aa 203  Q
    ||    
T  32172791 aa 32172792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 2 - 124
Target Start/End: Complemental strand, 9202879 - 9202757
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    |||| |||||| | |||||||| | |||||||||||  ||| ||||| |||||||||||||  ||||||||||||||||| ||| ||| | ||| |||||    
T  9202879 ttatatataagctatttctgtagcaaaagataaaataaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatga 9202780  T
Q  102 aaataagctaaaaatagcttatg 124  Q
    |||||||||  ||| ||||||||    
T  9202779 aaataagctggaaacagcttatg 9202757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 32059719 - 32059642
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataa 80  Q
    ||||||||||| ||||| ||||||||| ||||||||  ||||||| | |||||||||||||| ||||||||||||||||    
T  32059719 ttatgtataagctgtttttgtaactaa-gataaaataaagtcaaactgttttcatataagctataagctgttttcataa 32059642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 108
Target Start/End: Original strand, 12425535 - 12425616
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 108  Q
    |||||||||||  ||| ||||| ||||| |||||||| ||||||||||||| ||||||| ||||| ||| ||||||||||||    
T  12425535 aaagataaaataaagttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataag 12425616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 36796836 - 36796708
Alignment:
Q  3 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaa 102  Q
    |||||||||||| |||||| ||| ||| |||||||   || ||||| |||||| ||||||| ||||||||||||||  ||||| ||||| ||| ||  ||    
T  36796836 tatgtataagttatttctgcaacaaaaaataaaataaggttaaattattttcacataagctataagctgttttcatttgctatattggaaaacttacaaa 36796737  T
Q  103 aataagctaaaaatagcttatggacgtgt 131  Q
    ||||| || |||| |||||||| ||||||    
T  36796736 aataaactgaaaacagcttatgaacgtgt 36796708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 4014492 - 4014433
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||||||||||||||| ||||| ||| |||||||||||||| |||| ||||||||    
T  4014492 taagctgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttatg 4014433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 10272537 - 10272413
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    |||||||||||  ||||||||| ||||| |||||||| |||| ||||||||||||| || ||||| |   |||||||||||||| |||| | ||||  ||    
T  10272537 aaagataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaataagctgaaaacaacttacaga 10272438  T
Q  127 cgtgttatatgtttgtttctataagc 152  Q
    | ||| ||| | ||||||||||||||    
T  10272437 catgtcataag-ttgtttctataagc 10272413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 14295459 - 14295528
Alignment:
Q  16 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||| |||| |||||||||||  ||||||| | |||||||||||||| |||||||||||| ||||||||    
T  14295459 tttctataacaaaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctat 14295528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 26209543 - 26209461
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttca-tataagctctaagctgttttcataagctat 85  Q
    ||||||||||||| ||||| ||||  ||||||||||  |||| |||| |||||| |||||||| |||||||||||||||||||||    
T  26209543 ttatgtataagttatttctataac--aagataaaataaagtccaattgttttcaatataagctataagctgttttcataagctat 26209461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 37588483 - 37588370
Alignment:
Q  10 aagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagc 109  Q
    ||||| ||||| |||  |||||||||||| | |||||   |||||||||||||| |||| |||||||||||| |||| |||| | | |||| ||||||||    
T  37588483 aagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagc 37588384  T
Q  110 taaaaatagcttat 123  Q
    | |||| |||||||    
T  37588383 tgaaaacagcttat 37588370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 118
Target Start/End: Original strand, 28776980 - 28777048
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatag 118  Q
    ||||| |||| ||| ||||||||||||||||||||| ||||| |||  ||||||||||| |||||||||    
T  28776980 ttttcgtataggctataagctgttttcataagctatcttggagaactaatgaaaataagataaaaatag 28777048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 9703365 - 9703286
Alignment:
Q  8 ataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattt 87  Q
    ||||||| |||||||||| | |||||||||  ||||||| || |||||||||||||  ||| |||||||||||| |||||    
T  9703365 ataagttatttctgtaacaagagataaaataaagtcaaactcatttcatataagctacaagttgttttcataagttattt 9703286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 38047986 - 38047903
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||||| | | ||| |||| |||||||||||  ||||||||| ||||||||||  || || ||||||||||||||||||    
T  38047986 ttatgtataagctatatctctaacaaaagataaaataaagtcaaattattttcatatatactatatgctgttttcataagctat 38047903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 2568645 - 2568719
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| |||||||| |||| ||||||||||||||||  |||| | |  |||||||||||||||||||| ||||||    
T  2568645 ttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatg 2568719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 7319387 - 7319453
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 110  Q
    ||||| |||||||||||||| ||| |||||||| |||||||| ||||| ||| ||| ||||||||||    
T  7319387 aaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaataagct 7319453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 110
Target Start/End: Complemental strand, 35553281 - 35553211
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 110  Q
    |||||||||||||||||||||||| ||| || |||||||| |||||| |||| | | |||| |||||||||    
T  35553281 agtcaaattcttttcatataagctataaactattttcatacgctattctggagagcttatggaaataagct 35553211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 155
Target Start/End: Original strand, 41052874 - 41052959
Alignment:
Q  69 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctct 155  Q
    |||||||||||| |||||||||| | | |||| ||||||| ||||||||| ||||| || ||| ||| | |||||||||||||||||    
T  41052874 ctgttttcataacctattttggagagcttatggaaataagttaaaaatagtttatgaacatgtcata-ggttgtttctataagctct 41052959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 7984965 - 7985030
Alignment:
Q  59 aagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| |||||| |||||||||||||| ||||| ||  |||||||||||||| |||| ||||||||    
T  7984965 aagctataagcttttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 7985030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 234 - 279
Target Start/End: Original strand, 9174928 - 9174973
Alignment:
Q  234 tttatgctagtaaataagctcaaataagtcaatctaaacatgccct 279  Q
    ||||||||| || ||||||||||||||||||||| |||||||||||    
T  9174928 tttatgctaatagataagctcaaataagtcaatccaaacatgccct 9174973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 12975326 - 12975375
Alignment:
Q  42 tcaaattcttttcatataagctctaagctgttttcataagctattttgga 91  Q
    ||||||| |||||||||||||| |||||||| |||||||||||| |||||    
T  12975326 tcaaattgttttcatataagctataagctgtgttcataagctatcttgga 12975375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 10 - 123
Target Start/End: Complemental strand, 37526322 - 37526209
Alignment:
Q  10 aagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagc 109  Q
    ||||| ||||| |||  |||||||||||| | |||||   |||||||||||||| |||| |||||||||||| | || |||| | | |||| ||||||||    
T  37526322 aagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataagttgttctggagagcttatggaaataagc 37526223  T
Q  110 taaaaatagcttat 123  Q
    | |||| |||||||    
T  37526222 tgaaaacagcttat 37526209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 123
Target Start/End: Complemental strand, 37690767 - 37690646
Alignment:
Q  3 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcat-aagctattttggataacatatga 101  Q
    |||||| ||||| ||||| |||  |||||||||||| | |||||   |||||||||||||| |||| ||||||||| ||| |||| |||| | | ||||     
T  37690767 tatgtaaaagttatttctataataaaagataaaatcaaatcaaaaagttttcatataagctataagttgttttcataaagttattatggagagcttatgg 37690668  T
Q  102 aaataagctaaaaatagcttat 123  Q
    ||||||||| |||| |||||||    
T  37690667 aaataagctgaaaacagcttat 37690646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 1619071 - 1619150
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||| | |||||||| |||||||||||||||||| | |||||| | ||||||||||| |||| |||| || |||||    
T  1619071 aaattctttccgtataagctataagctgttttcataagcca-tttggagagcatatgaaaatcagctgaaaacagtttatg 1619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 18704166 - 18704083
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    ||||||||||||| ||||| |||| ||||||||| |  ||||||  | |||| ||||||||| |||| |||||||||||||||||    
T  18704166 ttatgtataagttatttctataacaaaagataaa-taaagtcaagctatttttatataagctataagttgttttcataagctatt 18704083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 35135794 - 35135713
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    |||||||||||| | ||||| |||| |||||||||||  ||||||| | |||||||||||||| ||||    ||||||||||||||    
T  35135794 tttatgtataagatatttctataacaaaagataaaataaagtcaaactattttcatataagctataag----tttcataagctatt 35135713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 41981942 - 41981874
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| || |||||||||||||||| ||||||| || ||| || |||||||||||||||  ||||||||    
T  41981942 tataaactataagctgttttcataaactatttttgagaacttacgaaaataagctaaaagcagcttatg 41981874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 6587195 - 6587116
Alignment:
Q  45 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||| ||||| |||||||| |||| ||||||||||||||||  |||| ||| | ||||||||||||  ||| ||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatg 6587116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 11297232 - 11297114
Alignment:
Q  97 tatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctc 196  Q
    |||||||||||||| ||||||||| || ||| |||  || ||| ||||| ||||||||||   ||||||||||| | || |||||| | ||||||||||     
T  11297232 tatgaaaataagctgaaaatagctaattgacatgtcttaagtt-gtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagctt 11297134  T
Q  197 aaataaaacaatccaaacag 216  Q
    ||||||  |||| |||||||    
T  11297133 aaataagtcaattcaaacag 11297114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 84
Target Start/End: Complemental strand, 12595860 - 12595789
Alignment:
Q  13 ttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    |||||||| |||| |||||||||||  ||| ||||| ||||||||||| || | ||||| ||||||||||||    
T  12595860 ttgtttctataacaaaagataaaataaagttaaattgttttcatataaactatgagctggtttcataagcta 12595789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 16889674 - 16889757
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||||| | ||||  |||| ||||||||| |  ||||||| | |||| ||| ||||| |||||||||||||||||||||    
T  16889674 ttatgtataagctatttccataacaaaagataaacttaagtcaaactgtttttatagaagctataagctgttttcataagctat 16889757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 220 - 267
Target Start/End: Original strand, 31723903 - 31723950
Alignment:
Q  220 tagtctcattggtctttatgctagtaaataagctcaaataagtcaatc 267  Q
    |||||||||  || |||||||||||| |||||||||||||||||||||    
T  31723903 tagtctcataagtgtttatgctagtacataagctcaaataagtcaatc 31723950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 36326104 - 36326159
Alignment:
Q  160 aacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 215  Q
    |||| ||| |||| ||||||||| |||||||||||| |||||| ||||||||||||    
T  36326104 aacaatctcaccagtgcttatgccaatagataagctaaaataagacaatccaaaca 36326159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 41957540 - 41957457
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    ||||| ||||||| |||| | |||||||||||||||||||||  | || ||| |||||||||||| | |||| | |||||||||    
T  41957540 aaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggac 41957457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 234 - 264
Target Start/End: Original strand, 1899265 - 1899295
Alignment:
Q  234 tttatgctagtaaataagctcaaataagtca 264  Q
    |||||||||||||||||||||||||||||||    
T  1899265 tttatgctagtaaataagctcaaataagtca 1899295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 99
Target Start/End: Original strand, 4620187 - 4620229
Alignment:
Q  57 ataagctctaagctgttttcataagctattttggataacatat 99  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||    
T  4620187 ataagctataagctgttttcataagctatgttggagaacatat 4620229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 7319072 - 7319014
Alignment:
Q  69 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    ||||||||||||||||| ||||| ||| |||||||||||||| | || | |||||||||    
T  7319072 ctgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggac 7319014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 177 - 215
Target Start/End: Original strand, 9174929 - 9174967
Alignment:
Q  177 ttatgctaatagataagctcaaataaaacaatccaaaca 215  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  9174929 ttatgctaatagataagctcaaataagtcaatccaaaca 9174967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 70 - 124
Target Start/End: Original strand, 10639960 - 10640014
Alignment:
Q  70 tgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| ||||| |||||||||| ||| ||||||||||||||| ||| ||||||||    
T  10639960 tgtttacataaactattttggagaacttatgaaaataagctagaaaaagcttatg 10640014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 88
Target Start/End: Complemental strand, 15402960 - 15402874
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatttt 88  Q
    |||||| |||||| ||||  |||| ||||||||||| ||||| || | |||||| | ||||| |||| ||||||||||| |||||||    
T  15402960 ttatgtttaagttatttcattaacaaaagataaaatagagtcgaaatgttttcaaaaaagctataagttgttttcataacctatttt 15402874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 24030469 - 24030419
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||| |||||| ||||||||| || |||||| |||||||||||||||||||    
T  24030469 taagttgtttttataagctatattagataacttatgaaaataagctaaaaa 24030419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 32969241 - 32969187
Alignment:
Q  9 taagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagct 63  Q
    |||||||||||| |||| |||||||||||  ||||||||| |||| |||||||||    
T  32969241 taagttgtttctataacaaaagataaaataaagtcaaattatttttatataagct 32969187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 285
Target Start/End: Complemental strand, 34736472 - 34736434
Alignment:
Q  247 ataagctcaaataagtcaatctaaacatgccctaattgg 285  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  34736472 ataagctcaaataagtcaatccaaacatgccctatttgg 34736434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 279
Target Start/End: Complemental strand, 8651310 - 8651265
Alignment:
Q  234 tttatgctagtaaataagctcaaataagtcaatctaaacatgccct 279  Q
    |||||||||| | ||||||||||||||| ||||| |||||||||||    
T  8651310 tttatgctagaagataagctcaaataaggcaatccaaacatgccct 8651265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 11457152 - 11457236
Alignment:
Q  117 agcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 202  Q
    ||||||||||| ||| ||| ||| ||||| |||||||||||  |||||||| || | || || ||| |||||||||||||||||||    
T  11457152 agcttatggacatgtcataagtt-gtttccataagctcttcaaaacagtctcacaagtgtttctgccaatagataagctcaaataa 11457236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 16937841 - 16937800
Alignment:
Q  176 cttatgctaatagataagctcaaataaaacaatccaaacagg 217  Q
    ||||||||| |||||||||||||||||  |||||||||||||    
T  16937841 cttatgctagtagataagctcaaataagccaatccaaacagg 16937800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Original strand, 34205216 - 34205261
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||| |||| ||||||||| |||| ||||||||||||||||    
T  34205216 agtcaaattatttttatataagctataagttgttttcataagctat 34205261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 40119945 - 40119880
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 121  Q
    |||||||| ||| |||||||||||||| || ||||||||| | ||||||||| |||| || |||||    
T  40119945 tataagctataacctgttttcataagcgatcttggataacttgtgaaaataatctaagaacagctt 40119880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 88
Target Start/End: Original strand, 40120084 - 40120145
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatttt 88  Q
    |||||||||||| | ||||||| |||||||||||||| || | |||||||| |||| |||||    
T  40120084 aaagataaaatcaaatcaaattgttttcatataagctataggttgttttcacaagcaatttt 40120145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 6938693 - 6938649
Alignment:
Q  174 tgcttatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    ||||||||||| |||||||||||||||||   |||||||||||||    
T  6938693 tgcttatgctagtagataagctcaaataacctaatccaaacaggc 6938649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 7705955 - 7705911
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaacatgccct 279  Q
    ||||||||||| ||| ||||||||||||||||| ||||| |||||    
T  7705955 ttatgctagtagatatgctcaaataagtcaatccaaacaggccct 7705911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 19138810 - 19138766
Alignment:
Q  42 tcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    ||||||| |||||| ||||||| |||| |||||||||||||||||    
T  19138810 tcaaattgttttcagataagctataagttgttttcataagctatt 19138766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 32942611 - 32942659
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaa 104  Q
    |||| ||| ||||||||||||||||||||| ||||| ||| ||||||||    
T  32942611 tatatgctataagctgttttcataagctatcttggagaacttatgaaaa 32942659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 4 - 135
Target Start/End: Complemental strand, 40205201 - 40205072
Alignment:
Q  4 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaa 103  Q
    ||||||||| |  |||| |||| |||| |||||| |||||| ||  ||||||||||| ||  ||| ||||||||||||||||  |||| | | |||  ||    
T  40205201 atgtataagatacttctataacaaaaggtaaaattgagtcagatagttttcatataaact--aagttgttttcataagctatcctggagagcttatagaa 40205104  T
Q  104 ataagctaaaaatagcttatggacgtgttata 135  Q
    ||||||| |||| || |||||||| |||||||    
T  40205103 ataagctgaaaacagattatggacatgttata 40205072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 41277456 - 41277392
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttgga 91  Q
    |||||||||||  ||||||| | |||||||||||| |  ||| |||||||||||||||| |||||    
T  41277456 aaagataaaataaagtcaaactgttttcatataagttaaaagttgttttcataagctatcttgga 41277392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 133
Target Start/End: Original strand, 42582914 - 42582982
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgtta 133  Q
    |||||||||||  |||||||| ||||| ||| |||||||||||||| |||| || ||||| || |||||    
T  42582914 taagctgtttttgtaagctatattggagaacttatgaaaataagctcaaaacagtttatgaacatgtta 42582982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 7e-22; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 40689092 - 40688995
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||||||  ||| ||||| |||||||||||||| |||||||| ||||||||||||  |||||||| |||||||||||||| |||| ||||||||    
T  40689092 aaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaataagctcaaaacagcttatg 40688995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 48157252 - 48157075
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 100  Q
    ||||||||||| || ||||| |||  |||||||||||  ||| ||||| |||| ||||||||| |||  |||||||| ||||||||  ||| | | ||||    
T  48157252 tttatgtataacttatttctataataaaagataaaataaagtgaaattgttttaatataagctataatttgttttcacaagctattcgggagatcttatg 48157153  T
Q  101 aaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgctta 179  Q
     ||||||||| |||| ||||||||||| ||  ||| | ||||||||||||||||| |  |||||||| || ||||||||    
T  48157152 gaaataagctgaaaacagcttatggacatggcataag-ttgtttctataagctctcccaaacagtctcacaaatgctta 48157075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 139
Target Start/End: Original strand, 38010694 - 38010790
Alignment:
Q  43 caaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtt 139  Q
    |||||| |||||||||||||| |||||||||||||||| ||||  | || ||| |||| |||||||||||||| |||||||| || |||||| ||||    
T  38010694 caaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgtt 38010790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 47177617 - 47177693
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 120  Q
    ||||| |||||||||||||| ||||||||||||| ||||||| ||||| ||  |||||||||||||||||| |||||    
T  47177617 aaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaataagctaaaagtagct 47177693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 12110325 - 12110412
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||||||||  ||||||||| ||||  |||||||| ||||||||||||||||||||| ||| | ||| ||||||||||| |||||||    
T  12110325 aagataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaataatctaaaaa 12110412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 27548227 - 27548310
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 110  Q
    |||||||||||  |||| |||| ||||||| |||||| ||||||||||||||||||||| ||||||||| |||| | |||||||    
T  27548227 aaagataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatcttggataacttatggagataagct 27548310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 28165030 - 28165152
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||||| ||||| |||| |||||||||||  ||||||||| |||| ||||||||| ||| |||| || |||||||||  |||| | | ||||     
T  28165030 ttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagagcttatgg 28165129  T
Q  102 aaataagctaaaaatagcttatg 124  Q
    ||||||| | |||| ||||||||    
T  28165130 aaataagttgaaaacagcttatg 28165152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 20526448 - 20526505
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    ||||||||||||||||||||||||||| |||  |||||||||||||||||| ||||||    
T  20526448 taagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagctta 20526505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 39505895 - 39506014
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 100  Q
    |||||||||||||| ||| |||| | |||||| |||| |||||||| | ||| |||||||||  |||| ||||||||||||||||| |||| |   ||||    
T  39505895 tttatgtataagttatttttgtagcaaaagattaaatagagtcaaactgttt-catataagcattaagttgttttcataagctattctggagagtttatg 39505993  T
Q  101 aaaataagctaaaaatagctt 121  Q
     ||||||||| ||||||||||    
T  39505994 gaaataagctgaaaatagctt 39506014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 47510116 - 47510190
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||||||||| |||||||||||||||| || | ||||| ||| | ||||||||||||||||  ||||||||    
T  47510116 ttttcatataagctgtaagctgttttcataaactctcttggacaacttgtgaaaataagctaaaaggagcttatg 47510190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 6263446 - 6263382
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaa 114  Q
    |||||||||||| | ||||||| |||||||||||||| |||| | |||||| |||||||||||||    
T  6263446 ttttcatataagttataagctgatttcataagctattatggagagcatatggaaataagctaaaa 6263382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 108
Target Start/End: Original strand, 44821936 - 44822004
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 108  Q
    ||||||||| ||||  |||||| | |||||||||||||||||||||| |||| ||| ||||||||||||    
T  44821936 agtcaaattgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataag 44822004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 1417202 - 1417285
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    |||||||||||  | ||| | |||| |||||||||||  ||||||||| |||||||||||||  |||| |||||||||||||||    
T  1417202 tttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagcta 1417285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 24363560 - 24363517
Alignment:
Q  174 tgcttatgctaatagataagctcaaataaaacaatccaaacagg 217  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  24363560 tgcttatgctagtagataaactcaaataaaacaatccaaacagg 24363517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 48470046 - 48470105
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||| |||||||||||||||||||| ||||| |||||| ||||||| |||| ||||||||    
T  48470046 taagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatg 48470105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 28340950 - 28340892
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||| ||||  ||||||||| || ||||||||||| |||||||||||||||||||||    
T  28340950 aaagatgaaatgaagtcaaattgttgtcatataagctataagctgttttcataagctat 28340892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 21453247 - 21453316
Alignment:
Q  16 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||| |||||||| ||  |||||| || || ||||||||||| ||| |||||||||||||||||    
T  21453247 tttctgtaacaaaagataagataaagtcaagttgttctcatataagctataaactgttttcataagctat 21453316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 46825062 - 46825151
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga-aaataagctaaaaa 115  Q
    |||||||||||  ||||||||| |||||||||||||  ||| | ||||||||||||||| |||||   | ||||| ||||||||||||||    
T  46825062 aaagataaaataaagtcaaattgttttcatataagccataaaccgttttcataagctatcttggagtgcttatgagaaataagctaaaaa 46825151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 7623078 - 7623202
Alignment:
Q  3 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaa 102  Q
    |||||||||||| ||| | |||| |||| ||||||  |||| || |||||| ||||||||| |||||| ||||||||| |||| ||| | |   || |||    
T  7623078 tatgtataagttatttttataacaaaaggtaaaataaagtccaactctttttatataagctgtaagctattttcataaactatcttgaagagtttacgaa 7623177  T
Q  103 aataagctaaaaatagcttatggac 127  Q
    ||||||| ||||| | |||||||||    
T  7623178 aataagccaaaaacaacttatggac 7623202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 281
Target Start/End: Original strand, 23214954 - 23215014
Alignment:
Q  221 agtctcattggtctttatgctagtaaataagctcaaataagtcaatctaaacatgccctaa 281  Q
    ||||||||  || |||||||||||| ||||| ||||||||||||||| |||||||| ||||    
T  23214954 agtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaacatgctctaa 23215014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 30456556 - 30456476
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 107  Q
    |||||||||||  ||||||||| |||||||||||| | ||||  |||||||||| |||| ||||| | | |||||||||||    
T  30456556 aaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaataa 30456476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Original strand, 31002725 - 31002781
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagct 83  Q
    |||||||||||  ||||||| | |||||||||||||| ||||||||||| |||||||    
T  31002725 aaagataaaataaagtcaaaatattttcatataagctataagctgttttgataagct 31002781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 123
Target Start/End: Original strand, 752962 - 753029
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 123  Q
    |||||||| ||||||||||| |||| |||| ||||  | ||||||||||| ||||||||| |||||||    
T  752962 tataagctataagctgttttgataaactatcttggggagcatatgaaaattagctaaaaacagcttat 753029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 992013 - 992092
Alignment:
Q  6 gtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||||||||| |||| ||| |||||||  || |||| | |||||||||||| | ||| || ||||||||||||||    
T  992013 gtataagttgtttctataacaaaaaataaaataaagacaaaatattttcatataaggtataaacttttttcataagctat 992092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 24909641 - 24909692
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctattttgga 91  Q
    ||||||||| |||||||||||||| |||| |||||||||||| |||| ||||    
T  24909641 agtcaaattattttcatataagctataagttgttttcataagatattgtgga 24909692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 34441028 - 34441115
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttg 89  Q
    ||||||||| ||| || || |||| || ||||||||  ||| ||||| ||| |||||||||| ||| || ||||||||||||||||||    
T  34441028 ttatgtatacgttattcctctaacaaacgataaaataaagttaaattgtttgcatataagctgtaaactattttcataagctattttg 34441115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 108
Target Start/End: Original strand, 43648242 - 43648285
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataag 108  Q
    ||||||||||||||||||||| ||||| || |||||||||||||    
T  43648242 taagctgttttcataagctatcttggagaaaatatgaaaataag 43648285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 45790502 - 45790443
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||||| |||| |||||| |||| |||| ||||||||| |||||||||||||| ||||    
T  45790502 tataagctataagttgtttttataaactatattggataacttatgaaaataagctgaaaa 45790443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 47046211 - 47046156
Alignment:
Q  30 gataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||  ||||||||| |||||||||||||||  || ||||||||||||||||    
T  47046211 gataaaataaagtcaaattgttttcatataagctccgagttgttttcataagctat 47046156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 6601369 - 6601431
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    ||||||||||| |||||||||| ||||   | |||||||||||||| | ||||||||||||||    
T  6601369 taagctgtttttataagctattctggagtgcttatgaaaataagctgagaatagcttatggac 6601431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 27481426 - 27481320
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 100  Q
    |||||||||||| | ||||| |||| || |||||||   ||||||| | ||| |||||||||| |||| | ||||||||||||||  |||||| | ||||    
T  27481426 tttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctatcatggatagcttatg 27481327  T
Q  101 aaaataa 107  Q
     ||||||    
T  27481326 gaaataa 27481320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 123
Target Start/End: Original strand, 33128755 - 33128813
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 123  Q
    |||||||||| ||||| |||| ||||| ||| | ||||||||||||||||| |||||||    
T  33128755 taagctgtttacataaactatattggagaacttgtgaaaataagctaaaaaaagcttat 33128813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 61
Target Start/End: Complemental strand, 39591593 - 39591539
Alignment:
Q  7 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataag 61  Q
    |||||||| ||||| |||| |||||||||||  ||||||||| ||||||||||||    
T  39591593 tataagttatttctataacaaaagataaaataaagtcaaattgttttcatataag 39591539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49060478 - 49060556
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcata 79  Q
    |||||||||||| | ||||| |||| ||| |||||||  ||||||||| |||| ||||||||| |||| | ||||||||    
T  49060478 tttatgtataagctatttctataacaaaaaataaaataaagtcaaattatttttatataagctataagttattttcata 49060556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 84
Target Start/End: Complemental strand, 5006639 - 5006558
Alignment:
Q  3 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    |||||||||| | || || |||| |||||||||||  ||||||| | |||||||||||| | |||  |||||||||||||||    
T  5006639 tatgtataagctattcctataacaaaagataaaataaagtcaaactgttttcatataaggtataaattgttttcataagcta 5006558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 85
Target Start/End: Complemental strand, 5369784 - 5369739
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||| | |||||||||| ||| |||||||||||||||||||||    
T  5369784 agtcaaactgttttcatatatgctataagctgttttcataagctat 5369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 23918895 - 23918980
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    ||||||| |||||| | ||| | || |||||||||||  ||||||||| |||||||||||||| ||| ||||  |||||| |||||    
T  23918895 tttatgtgtaagttatctctattacaaaagataaaataaagtcaaattgttttcatataagctataatctgtaatcataaactatt 23918980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 108
Target Start/End: Original strand, 33678776 - 33678825
Alignment:
Q  59 aagctctaagctgttttcataagctattttggataacatatgaaaataag 108  Q
    ||||| ||||||||||||||||||||| ||||| ||| | ||||||||||    
T  33678776 aagctataagctgttttcataagctatcttggaaaacttgtgaaaataag 33678825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 280
Target Start/End: Complemental strand, 34083565 - 34083520
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaacatgcccta 280  Q
    |||||| |||| || |||||||||||||||||| ||||||||||||    
T  34083565 ttatgcaagtagatgagctcaaataagtcaatccaaacatgcccta 34083520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 86
Target Start/End: Original strand, 39518807 - 39518852
Alignment:
Q  41 gtcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    |||||||| ||| |||||||||| |||| |||||||||||||||||    
T  39518807 gtcaaattgtttgcatataagctttaagttgttttcataagctatt 39518852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Complemental strand, 46280349 - 46280284
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 121  Q
    |||| ||| ||||||||||| ||||||||| ||||| ||| |||||||||| ||| |||| |||||    
T  46280349 tatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaaaagctt 46280284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 153
Target Start/End: Complemental strand, 46609186 - 46609074
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtt 139  Q
    ||||||| | |||||||||||| | ||||||||| |  |||| |||||| || |   |||| ||||||||| ||||||| |||| ||| |||||| |||     
T  46609186 agtcaaactgttttcatataaggtataagctgttctggtaagttatttttgagagattatggaaataagctgaaaatagtttatagacatgttat-tgtc 46609088  T
Q  140 tgtttctataagct 153  Q
    ||||||||||||||    
T  46609087 tgtttctataagct 46609074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 5010426 - 5010390
Alignment:
Q  237 atgctagtaaataagctcaaataagtcaatctaaaca 273  Q
    |||||||||||||| |||||||||||||||| |||||    
T  5010426 atgctagtaaataaactcaaataagtcaatcaaaaca 5010390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 8680930 - 8680986
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcata 57  Q
    |||||||||||||| ||| |||||| ||||||| |||  ||||||||| ||||||||    
T  8680930 tttatgtataagttatttttgtaacaaaagatataataaagtcaaattattttcata 8680986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 22759124 - 22759208
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||| |||| | ||| | |||| |||||||||||  ||  ||||| ||||||||||||||  |||||| |||||||||||||    
T  22759124 tttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagctaaaagctgatttcataagctat 22759208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 122
Target Start/End: Original strand, 30535550 - 30535622
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    ||||| ||||| || |||||||||| |||||||||| ||  | ||||||||||||||| || |||| ||||||    
T  30535550 ttttcgtataatctataagctgtttccataagctatcttatagaacatatgaaaataacctgaaaacagctta 30535622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 212
Target Start/End: Original strand, 32410648 - 32410688
Alignment:
Q  172 aatgcttatgctaatagataagctcaaataaaacaatccaa 212  Q
    ||||||||||| |||||||||||||||||||  ||||||||    
T  32410648 aatgcttatgccaatagataagctcaaataagccaatccaa 32410688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 70
Target Start/End: Original strand, 35536046 - 35536114
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagct 70  Q
    ||||||||||| | ||||| ||||  ||||||||||  ||||||||| |||||||||||| | ||||||    
T  35536046 ttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataagct 35536114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 36517588 - 36517640
Alignment:
Q  72 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||||||||| ||||| ||  ||||||||||| || |||||||||||||    
T  36517588 ttttcataagctatcttggagaaattatgaaaataaactgaaaatagcttatg 36517640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 37064570 - 37064482
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||| ||||  ||| ||||| |||| | ||| ||| |||||||||||| ||||||||||| ||  || |||||||||||||| ||||    
T  37064570 aaagatgaaatacagttaaattgtttttacatatgctataagctgttttcgtaagctattttagaggacttatgaaaataagctgaaaa 37064482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 279
Target Start/End: Complemental strand, 40371599 - 40371567
Alignment:
Q  247 ataagctcaaataagtcaatctaaacatgccct 279  Q
    ||||||||||||||||||||| |||||||||||    
T  40371599 ataagctcaaataagtcaatccaaacatgccct 40371567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 40598440 - 40598404
Alignment:
Q  237 atgctagtaaataagctcaaataagtcaatctaaaca 273  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  40598440 atgctagtagataagctcaaataagtcaatccaaaca 40598404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 47559669 - 47559629
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaat 105  Q
    ||||||||||||||||| ||||||||| ||| |||||||||    
T  47559669 taagctgttttcataagttattttggagaacttatgaaaat 47559629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 27 - 215
Target Start/End: Original strand, 11513862 - 11514047
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    |||||||||||  ||||||||| |||||||||||||| |||| ||||||||||||||||  |||| ||| | || ||||||||| |||||||||||| |     
T  11513862 aaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaacttttggaaataagctgaaaatagcttatagg 11513961  T
Q  127 cgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 215  Q
    | ||  ||     |||||  |||||||||    |||||||| || | ||||||||||| ||||||| |||||||||| |||||||||||    
T  11513962 catgccat---gctgttttcataagctctctaaaacagtctcacaagtgcttatgctagtagataatctcaaataaaccaatccaaaca 11514047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 18066109 - 18066189
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||| ||| || ||||||||| | |||||||||||||    
T  18066109 aaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatg 18066189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 139
Target Start/End: Complemental strand, 22681275 - 22681179
Alignment:
Q  43 caaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtt 139  Q
    |||||| |||||||||||||| |||||||||||||||| ||||  | || ||| |||| |||||||||||||| |||||||| || |||||| ||||    
T  22681275 caaattgttttcatataagctataagctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgttatttgtt 22681179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 202
Target Start/End: Original strand, 15377752 - 15377903
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagc-taaaaatagcttatggacgtgttatatgtttgtttctat 148  Q
    |||||||||||| | |||||||||||||||||||||| ||   | | ||||||||||| | |||||||||||||||||||||| ||| | ||||||| ||    
T  15377752 ttttcatataagttataagctgttttcataagctattctgaggagcttatgaaaataaacttaaaaatagcttatggacgtgtcataag-ttgtttccat 15377850  T
Q  149 aagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 202  Q
     || | |||  ||||| ||||| | |||||||| || || ||||||||||||||    
T  15377851 -agattttccaaacagccttacaattgcttatgttagtacataagctcaaataa 15377903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 18179323 - 18179246
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    |||||||||||||| ||||||| |||||||||||||  |||| ||| || ||||||||||| ||||||||| ||||||    
T  18179323 ttttcatataagctataagctgctttcataagctatcctggagaacttacgaaaataagctgaaaatagctaatggac 18179246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 81
Target Start/End: Original strand, 2416252 - 2416331
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 81  Q
    ||||||||||||| |||||||| | |||||||||||  ||| ||||| |||| ||||||||| ||||||||||| |||||    
T  2416252 ttatgtataagttatttctgtagcaaaagataaaatgaagttaaattgttttgatataagctataagctgtttttataag 2416331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 10143111 - 10143194
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||||||| ||||| |||| |||||||||||  ||||||| | |||| ||||||||| |||| | ||||||||||||||    
T  10143111 ttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctat 10143194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 106
Target Start/End: Original strand, 8017415 - 8017477
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 106  Q
    ||||| |||||||||||||| ||| ||||||||||||||||| ||||| ||| ||||||||||    
T  8017415 aaattattttcatataagctgtaaactgttttcataagctatcttggagaacttatgaaaata 8017477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 111
Target Start/End: Complemental strand, 41875780 - 41875675
Alignment:
Q  6 gtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaat 105  Q
    ||||||| ||||||| |||| |||||||||||   || || || ||||| |||||||| ||||||||||||||||||||| ||||  | | || ||||||    
T  41875780 gtataagctgtttctttaaccaaagataaaatgatgttaagttgttttcgtataagctgtaagctgttttcataagctatcttggtgagcttaagaaaat 41875681  T
Q  106 aagcta 111  Q
    ||||||    
T  41875680 aagcta 41875675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 127
Target Start/End: Complemental strand, 6993830 - 6993730
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    |||||||||||   |||||||| | |||||||||||| || | ||||||||||||||||  | || | | ||||||||||||||||||||  ||||||||    
T  6993830 aaagataaaataaggtcaaattatattcatataagctataggttgttttcataagctatgcttgagagcttatgaaaataagctaaaaatgacttatgga 6993731  T
Q  127 c 127  Q
    |    
T  6993730 c 6993730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 29643509 - 29643465
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    |||||||||  ||||||||||||||||||||||||||||||||||    
T  29643509 agtcaaattactttcatataagctctaagctgttttcataagcta 29643465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 42457912 - 42458000
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||||||||  ||| ||||| ||||  | |||||||| |||||| |||||||||||| || || |||||||||||||||||| ||||    
T  42457912 aaagataaaataaagttaaattgtttttgtttaagctcttagctgtattcataagctatcttagagaacatatgaaaataagctgaaaa 42458000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 2416426 - 2416473
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaacatgccctaat 282  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||||||    
T  2416426 ttatgttagtagataaactcaaataagtcaatctaaacatgccctaat 2416473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 85
Target Start/End: Complemental strand, 17952832 - 17952749
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||| |||||| | ||||| |||| |||||||||||  ||||||| | ||||||||||||||  ||| ||||||||||||||||    
T  17952832 ttatatataagctatttctataacaaaagataaaataaagtcaaactattttcatataagctacaagatgttttcataagctat 17952749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 121
Target Start/End: Complemental strand, 12464579 - 12464485
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 121  Q
    |||||||||||  ||| ||||| ||||  |||| ||| |||||| |||||||||||||| ||||| ||| | |||||||||||| |||| |||||    
T  12464579 aaagataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagctt 12464485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 218
Target Start/End: Complemental strand, 15370297 - 15370239
Alignment:
Q  160 aacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    |||||||| || ||||||||||| | |||||||||||||||||  ||||||||||||||    
T  15370297 aacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaacaggc 15370239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 216
Target Start/End: Original strand, 32821848 - 32821961
Alignment:
Q  102 aaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaata 201  Q
    |||||| || |||| ||||||||||| ||| ||| ||| |||||||||| ||||||  ||||||||| | |||||||| | |  ||||||||||||||||    
T  32821848 aaataaactgaaaacagcttatggacatgtcataagtt-gtttctataaactcttccaaacagtcttgcaaatgcttacgttggtagataagctcaaata 32821946  T
Q  202 aaacaatccaaacag 216  Q
    |  ||||| ||||||    
T  32821947 agtcaatctaaacag 32821961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 124
Target Start/End: Original strand, 36043855 - 36043965
Alignment:
Q  14 tgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaa 113  Q
    ||||||| || | ||||||||||| |||| ||||| ||||| |||||||| ||| |||| ||||| || ||| ||||| | | ||||||| | |||||||    
T  36043855 tgtttctatagcgaaagataaaattgagttaaattgttttcgtataagctataaactgtcttcattagttatcttggagagcttatgaaattgagctaaa 36043954  T
Q  114 aatagcttatg 124  Q
    || ||||||||    
T  36043955 aacagcttatg 36043965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 108
Target Start/End: Complemental strand, 656903 - 656802
Alignment:
Q  7 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 106  Q
    |||||| | ||||| |||| |||||||||||  | ||||||| ||||| |||||||| |||| || ||||||||||||| ||| | | | ||||||||||    
T  656903 tataagctatttctataacaaaagataaaatataatcaaattgttttcgtataagctgtaagttgatttcataagctatcttgcagagcttatgaaaata 656804  T
Q  107 ag 108  Q
    ||    
T  656803 ag 656802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 6167358 - 6167305
Alignment:
Q  58 taagctctaagctgttttcataagctattttggataacatatgaaaataagcta 111  Q
    |||||| ||||||||||| ||||||||||||||| ||| |||| ||||||||||    
T  6167358 taagctataagctgtttttataagctattttggagaacttatggaaataagcta 6167305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 23143107 - 23143030
Alignment:
Q  4 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 81  Q
    ||||||||| | ||| |||||| |||||||||||| | ||||||| ||||| |||||||| | || ||||||||||||    
T  23143107 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataag 23143030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 81
Target Start/End: Complemental strand, 23554897 - 23554820
Alignment:
Q  4 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 81  Q
    ||||||||| | ||| |||||| |||||||||||| | ||||||| ||||| |||||||| | || ||||||||||||    
T  23554897 atgtataagctatttttgtaacaaaagataaaatcaaatcaaattgttttcttataagctattagttgttttcataag 23554820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 85
Target Start/End: Original strand, 25800810 - 25800851
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||| |||||||||||||| |||||||||||||||||||||    
T  25800810 aaattgttttcatataagctataagctgttttcataagctat 25800851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 39983329 - 39983402
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 123  Q
    |||||||||||||| |||| ||||||||||||||||  |||| | |  |||||||||| || ||||||||||||    
T  39983329 ttttcatataagctataagttgttttcataagctatcctggagagctaatgaaaataaactgaaaatagcttat 39983402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 123
Target Start/End: Original strand, 9395094 - 9395190
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 123  Q
    |||||||||||  ||  ||||| ||||||||||| || |||||||||||||| || |||| || | | | |||||||||||||| |||| |||||||    
T  9395094 aaagataaaataaagctaaattgttttcatataatctataagctgttttcattagttattctgtagagcttatgaaaataagctgaaaacagcttat 9395190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 26143708 - 26143656
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaata 117  Q
    ||||||||||||||||||||  ||||| ||| |||||||||||||| ||||||    
T  26143708 taagctgttttcataagctaacttggagaacttatgaaaataagctgaaaata 26143656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 26626854 - 26626934
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| ||||| ||||||||  |||||||||||||||||||| ||| | ||| ||||||||||| || |||| || |||||    
T  26626854 aaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatg 26626934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 28039437 - 28039341
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||||  |||| |||| ||||||||||| || |||||  |||||||||||| | ||||| ||  |||| ||||||||| |||| ||||||||    
T  28039437 aagataaaataaagtccaattgttttcatataaactataagcaattttcataagctttcttggaaaagttatggaaataagctgaaaacagcttatg 28039341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Complemental strand, 29316864 - 29316784
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| |||||| |||| || |||||||||||||| |||||| ||||| ||| |||| ||||||||| |||| | ||||||    
T  29316864 aaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatg 29316784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 33503105 - 33503153
Alignment:
Q  171 caatgcttatgctaatagataagctcaaataaaacaatccaaacaggct 219  Q
    |||||||||||||| |||||||||||||||||  |||| ||||||||||    
T  33503105 caatgcttatgctagtagataagctcaaataagccaatacaaacaggct 33503153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 40279190 - 40279258
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||| | |||| |||||||||||||||| ||||| ||| ||||||||| |||| ||||||| |||||    
T  40279190 tataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatg 40279258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 680484 - 680555
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||| ||||| |||||||| |||||| |||||||||||||| ||| | ||| | |||||||||||| ||||    
T  680484 aaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaataagctgaaaa 680555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 3423900 - 3423841
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataa 60  Q
    |||||||||||||| ||| |||| | |||||||||||  ||||||||| |||||||||||    
T  3423900 tttatgtataagttatttttgtaccaaaagataaaataaagtcaaattattttcatataa 3423841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 124
Target Start/End: Original strand, 3611232 - 3611287
Alignment:
Q  69 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||||||||| || |||||    
T  3611232 ctgttttcacaagctatcttggagaacttatgaaaataagctaaaaacagtttatg 3611287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 126
Target Start/End: Complemental strand, 7103588 - 7103489
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctg-ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    ||||||||||  ||||||| | |||| ||||||||| ||||||| |||||||||||||| || || |   | ||||||||||||||||| | ||||||||    
T  7103588 aagataaaataaagtcaaactgttttaatataagctataagctgtttttcataagctatcttagagagtttgtgaaaataagctaaaaacaacttatgga 7103489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 124
Target Start/End: Original strand, 9174817 - 9174876
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||||||||||||||| ||  | | | |||||||||||||| |||||||||||||    
T  9174817 taagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatg 9174876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 273
Target Start/End: Original strand, 9395245 - 9395280
Alignment:
Q  238 tgctagtaaataagctcaaataagtcaatctaaaca 273  Q
    |||||||||||||||||||||||||||||| |||||    
T  9395245 tgctagtaaataagctcaaataagtcaatccaaaca 9395280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 14302918 - 14302961
Alignment:
Q  160 aacagtcttaccaatgcttatgctaatagataagctcaaataaa 203  Q
    |||||||| || |||| |||||||||||||||||||||||||||    
T  14302918 aacagtctcacaaatgtttatgctaatagataagctcaaataaa 14302961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 91
Target Start/End: Complemental strand, 33931647 - 33931612
Alignment:
Q  56 tataagctctaagctgttttcataagctattttgga 91  Q
    |||||||| |||||||||||||||||||||||||||    
T  33931647 tataagctataagctgttttcataagctattttgga 33931612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 82
Target Start/End: Original strand, 42592303 - 42592358
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 82  Q
    |||||||||||  ||| || || |||||||||||||| ||||||||||||||||||    
T  42592303 aaagataaaattaagttaacttgttttcatataagctataagctgttttcataagc 42592358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 42621452 - 42621393
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||||| ||||||||||||||||| |||| |||| ||| | |||||||||||| ||||    
T  42621452 tataagctataagctgttttcataagttattctggagaacttgtgaaaataagctgaaaa 42621393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 5043666 - 5043608
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||  ||||||| | ||||||||||||||  ||| ||||||||||||||||    
T  5043666 aaagataaaataaagtcaaactgttttcatataagctagaagttgttttcataagctat 5043608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 247 - 281
Target Start/End: Complemental strand, 6772478 - 6772444
Alignment:
Q  247 ataagctcaaataagtcaatctaaacatgccctaa 281  Q
    ||||||||||||||||||||| |||||||||||||    
T  6772478 ataagctcaaataagtcaatccaaacatgccctaa 6772444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 10285970 - 10286012
Alignment:
Q  174 tgcttatgctaatagataagctcaaataaaacaatccaaacag 216  Q
    ||||||||| |||||||||||| |||||| |||||||||||||    
T  10285970 tgcttatgcaaatagataagcttaaataagacaatccaaacag 10286012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 33319876 - 33319822
Alignment:
Q  69 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 123  Q
    |||||||||||| |||| ||||| ||| |||||||||||||| |||| |||||||    
T  33319876 ctgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat 33319822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 281
Target Start/End: Complemental strand, 35378489 - 35378443
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaacatgccctaa 281  Q
    |||||||| || ||||||||||||||| ||||| |||||||||||||    
T  35378489 ttatgctattatataagctcaaataagccaatccaaacatgccctaa 35378443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 37448734 - 37448696
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaaca 273  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  37448734 ttatgctggtagataagctcaaataagtcaatctaaaca 37448696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 127
Target Start/End: Original strand, 40279409 - 40279471
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    |||| |||||||||||||||| ||||| ||| |||||||||||| | |||| || ||||||||    
T  40279409 taagttgttttcataagctatattggagaacttatgaaaataagttgaaaacagtttatggac 40279471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 43141835 - 43141893
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||| |  ||||||||| ||| |||||||||| |||| ||||||||||||||||    
T  43141835 aaagataaagtaaagtcaaattgtttccatataagctataagatgttttcataagctat 43141893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 1893355 - 1893290
Alignment:
Q  59 aagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| ||||||||||||  ||||||| ||||| ||| | |||||||||||| |||||| ||||||    
T  1893355 aagctataagctgttttcggaagctatcttggagaacttgtgaaaataagctgaaaataacttatg 1893290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 7 - 127
Target Start/End: Complemental strand, 1939458 - 1939338
Alignment:
Q  7 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatata-agctctaagctgttttcataagctattttggataacatatgaaaat 105  Q
    |||||||| ||||| |||| |||||||||||  ||| ||| | |||||||||  |||| ||| |||||||||||||||||  |||| | | |||| ||||    
T  1939458 tataagttatttctataacaaaagataaaataaagtgaaactattttcatattgagctataa-ctgttttcataagctatactggagagcttatggaaat 1939360  T
Q  106 aagctaaaaatagcttatggac 127  Q
    ||| | |||| |||||||||||    
T  1939359 aagttgaaaacagcttatggac 1939338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 108
Target Start/End: Complemental strand, 10646395 - 10646314
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 108  Q
    |||||||||||  ||||||||| ||||| |||||  | | |||  ||||||||||||||||| || ||| ||||||||||||    
T  10646395 aaagataaaataaagtcaaattattttcctataaattttgagcccttttcataagctattttagagaacttatgaaaataag 10646314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 13869186 - 13869121
Alignment:
Q  42 tcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 107  Q
    ||||||| ||||||| |||||| ||||||||||||||||| |||  |||| |||  ||||||||||    
T  13869186 tcaaattattttcatctaagctataagctgttttcataagttatcctggagaactaatgaaaataa 13869121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 16353848 - 16353889
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttgga 91  Q
    |||||||||||||| ||||||||||| ||||||||| |||||    
T  16353848 ttttcatataagctataagctgtttttataagctatcttgga 16353889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 16398116 - 16398173
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    |||||| |||||||||| ||| ||||| ||| |||||||||||||| |||| ||||||    
T  16398116 taagctattttcataagttatgttggagaacttatgaaaataagctgaaaacagctta 16398173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 85
Target Start/End: Original strand, 28933765 - 28933846
Alignment:
Q  4 atgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||| | ||| | |||| |||||||||||| | ||||||| ||||||| |||| | |||  ||||||||||||||||    
T  28933765 atgtataagctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctat 28933846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 31740076 - 31740019
Alignment:
Q  16 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgtt 73  Q
    ||||| ||||||||||||||||  ||||||| | |||||||||||||| |||| ||||    
T  31740076 tttctataactaaagataaaataaagtcaaactattttcatataagctataagttgtt 31740019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 34339845 - 34339961
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt-ttggataacatatg 100  Q
    |||||| |||||||||| |  ||| |||||||||||  ||||||||| ||||| |||||| | ||| || |||||||||| |||| ||||| | | || |    
T  34339845 ttatgtgtaagttgtttttaaaacaaaagataaaataaagtcaaattattttcgtataaggtataaactattttcataag-tattcttggagagcttaag 34339943  T
Q  101 aaaataagctaaaaatag 118  Q
    |||||||||| |||||||    
T  34339944 aaaataagctgaaaatag 34339961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 153
Target Start/End: Complemental strand, 34652097 - 34652017
Alignment:
Q  72 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagct 153  Q
    |||||||||||||| ||||| | | |||| ||||||| | |||| ||||||||||| ||| ||| | |||||||||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcataag-ttgtttctataagct 34652017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 67 - 124
Target Start/End: Complemental strand, 35378598 - 35378541
Alignment:
Q  67 agctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||||| ||||| || ||||||| | |||||||||||||| |||||| ||||||    
T  35378598 agctgttttcgtaagcaatcttggatagcttatgaaaataagctgaaaataacttatg 35378541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 750664 - 750731
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||| | |||||||| |||||||||| ||||| ||| |||| ||||||||| |||| ||||||||    
T  750664 tataagctatgagctgttt-cataagctatcttggagaacttatgcaaataagctcaaaacagcttatg 750731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 938593 - 938517
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    |||||||||||||| ||||| || |||||||||||| || || | | | |||||||||| | ||||| |||||||||    
T  938593 ttttcatataagctataagcggtattcataagctatcttagagagcttctgaaaataagtttaaaatggcttatgga 938517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 124
Target Start/End: Complemental strand, 1493630 - 1493522
Alignment:
Q  16 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||| |||| | |||||||||  |||| | || |||||||||||||| || ||||||||||||||  ||  ||  |||| |||||||||||||| ||||    
T  1493630 tttctataacaatagataaaataaagtctagttgttttcatataagctatatgctgttttcataagtcatcctgactaacttatgaaaataagctgaaaa 1493531  T
Q  116 tagcttatg 124  Q
     | ||||||    
T  1493530 caacttatg 1493522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 1625881 - 1625961
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| ||||| |||||| | |||| |||||||||||||||| ||||| ||| || |||||| |||| |||| | ||||||    
T  1625881 aaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatg 1625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 3458707 - 3458747
Alignment:
Q  234 tttatgctagtaaataagctcaaataagtcaatctaaacat 274  Q
    ||||||| ||||| ||||||||||||||||||||| |||||    
T  3458707 tttatgccagtaagtaagctcaaataagtcaatcttaacat 3458747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 6988061 - 6988137
Alignment:
Q  9 taagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||| ||||| |||| |||||||||||  ||||||||| ||||| ||  || | |||| ||||||||||||||||    
T  6988061 taagttttttctataacaaaagataaaataaagtcaaattattttcttactagttataagttgttttcataagctat 6988137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 35755634 - 35755554
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 81  Q
    |||||||||||| | ||||| |||  ||| | |||||  ||||||||| ||||||| |||||| |||| ||||||||||||    
T  35755634 tttatgtataagctatttctataatcaaatagaaaataaagtcaaattgttttcatgtaagctataagttgttttcataag 35755554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 39567845 - 39567921
Alignment:
Q  5 tgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 81  Q
    |||||||| | ||||| |||| |||||||||||  ||| ||||| |||  | ||||||| |||||||||||||||||    
T  39567845 tgtataagatatttctataacaaaagataaaataaagttaaattgtttcaagataagctataagctgttttcataag 39567921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 40759270 - 40759314
Alignment:
Q  174 tgcttatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    ||||||||  |||||||||||||||||||  ||||||||||||||    
T  40759270 tgcttatgtcaatagataagctcaaataaggcaatccaaacaggc 40759314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 178 - 218
Target Start/End: Complemental strand, 42868437 - 42868397
Alignment:
Q  178 tatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    ||||| |||||||||||||||||||  ||||||||||||||    
T  42868437 tatgccaatagataagctcaaataaggcaatccaaacaggc 42868397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 43199356 - 43199436
Alignment:
Q  5 tgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||| |||||  ||| |||||||||||  ||| ||||| | ||| |||||||| |||| ||||||||||| ||||    
T  43199356 tgtataagttatttctacaacaaaagataaaataaagttaaattatcttcgtataagctataagttgttttcataaactat 43199436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 2e-19; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 37273140 - 37273272
Alignment:
Q  69 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtctt 168  Q
    ||||||||||||||||| ||||| ||| |||| ||||||| | |||| | ||||||||| ||| ||| ||| ||||| ||||||||| |  ||||||||     
T  37273140 ctgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagtt-gtttccataagctctcccaaacagtctc 37273238  T
Q  169 accaatgcttatgctaatagataagctcaaataa 202  Q
    |||| |||||||||||||| ||||| ||||||||    
T  37273239 accagtgcttatgctaataaataagttcaaataa 37273272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 72 - 219
Target Start/End: Original strand, 45541580 - 45541726
Alignment:
Q  72 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttacc 171  Q
    |||||||||||||| ||||||||| ||||| ||||| || |||| |||||||| || ||| ||| |  |||||  ||||| |||||  |||||||||||     
T  45541580 ttttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataag-ctgttttcataagttcttctaaacagtcttaca 45541678  T
Q  172 aatgcttatgctaatagataagctcaaataaaacaatccaaacaggct 219  Q
    | || |||| | | || ||||||||||||||  |||||||||||||||    
T  45541679 agtgtttataccattaaataagctcaaataagtcaatccaaacaggct 45541726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 1395611 - 1395688
Alignment:
Q  3 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataa 80  Q
    |||||||||| | ||||| |||| |||||||||||  ||||||||| |||||||||||||| | | ||||||||||||    
T  1395611 tatgtataagctatttctataacaaaagataaaataaagtcaaattattttcatataagctatgaactgttttcataa 1395688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 215
Target Start/End: Original strand, 2923457 - 2923629
Alignment:
Q  42 tcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttg 141  Q
    |||||||  |||||| |||||| ||||||||||||||||||||   || | |   |||  |||||||||||||||| ||||||||| |||  || ||| |    
T  2923457 tcaaattgctttcatgtaagctataagctgttttcataagctacactgaagagattatataaataagctaaaaataacttatggacatgtagtaagtt-g 2923555  T
Q  142 tttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 215  Q
    |||||||||| |||||  ||||||||| | | | ||||||  ||||||||||||| |||||  |||||| ||||    
T  2923556 tttctataagttcttccaaacagtctttcaagtacttatgtcaatagataagctcgaataagtcaatccgaaca 2923629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 124
Target Start/End: Complemental strand, 32095317 - 32095200
Alignment:
Q  7 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 106  Q
    |||||||| ||||| |||| |||||||||||  ||| ||||| ||||  ||||| || ||||| |||||||||| |||| ||| | |||  || ||||||    
T  32095317 tataagttatttctataacaaaagataaaattaagttaaattgtttttgtataaactataagccgttttcataatctatcttgaaaaactaataaaaata 32095218  T
Q  107 agctaaaaatagcttatg 124  Q
    |||||||| |||||||||    
T  32095217 agctaaaattagcttatg 32095200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 36783440 - 36783343
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||||||  ||| ||||| ||||||||||| || | ||||||||||||||||||| |||||  |  |||||| ||||||| |||| ||||||||    
T  36783440 aaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctatattggagcaattatgaatataagctgaaaacagcttatg 36783343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 216
Target Start/End: Complemental strand, 25459624 - 25459548
Alignment:
Q  140 tgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacag 216  Q
    ||||||| ||||||||||  |||| ||| || | ||||||||||| | |||||||||||||||| ||||||||||||    
T  25459624 tgtttctctaagctcttccaaacaatctcacaagtgcttatgctagttgataagctcaaataaatcaatccaaacag 25459548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 33972797 - 33972729
Alignment:
Q  70 tgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgt 138  Q
    |||||| ||||||||||||||| ||| | |||||||||||| |||| || |||||||| ||||||||||    
T  33972797 tgtttttataagctattttggagaacttgtgaaaataagctgaaaaaaggttatggacatgttatatgt 33972729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 44747485 - 44747418
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 123  Q
    |||| ||| ||||||||||||||||||||| ||||| ||| |||||||||||||| |||  |||||||    
T  44747485 tataggctataagctgttttcataagctatcttggaaaacttatgaaaataagctgaaagaagcttat 44747418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 50600254 - 50600191
Alignment:
Q  57 ataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 120  Q
    ||||||| |||||||||||||| |||||| ||||| ||| |||||||||||||| |||| ||||    
T  50600254 ataagctataagctgttttcatcagctatattggagaacttatgaaaataagctgaaaacagct 50600191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 466202 - 466252
Alignment:
Q  72 ttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||| ||||||    
T  466202 ttttcataagctatgttggagaacttatgaaaataagctaaaaaaagctta 466252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 93
Target Start/End: Original strand, 2201092 - 2201158
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggata 93  Q
    ||||||||||   ||||||| | |||||||||||||| |||||||||||||| |||||| |||||||    
T  2201092 aaagataaaacaaagtcaaactgttttcatataagctataagctgttttcattagctatcttggata 2201158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 14145877 - 14145959
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 110  Q
    ||||||||||  ||| ||||| ||||| |||| ||| |||| | |||||||||||||| |||||| || ||||||||||||||    
T  14145877 aagataaaataaagttaaattgttttcgtatatgctataagttattttcataagctatcttggattacttatgaaaataagct 14145959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 37788799 - 37788884
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattt 87  Q
    |||||||||||||| ||| | |||| |||||||||||  |||| |||| ||||| ||||| || |||| ||||||||||||||||||    
T  37788799 tttatgtataagttattt-tataacaaaagataaaataaagtccaattattttcgtataatctataagttgttttcataagctattt 37788884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 58 - 127
Target Start/End: Original strand, 2719463 - 2719532
Alignment:
Q  58 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    |||||| ||| ||||||||||||||||| ||||| ||| |||||||||||||| | || | |||||||||    
T  2719463 taagctataaactgttttcataagctatcttggagaacttatgaaaataagctgagaacaacttatggac 2719532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 77 - 218
Target Start/End: Complemental strand, 4534431 - 4534291
Alignment:
Q  77 ataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgc 176  Q
    ||||||||||||||| | | ||   |||||||||||||  | |||| | |||||||||| ||| |||||||||| |||| |  || ||| |||| |  ||    
T  4534431 ataagctattttggagaccttacagaaataagctaaaatcaacttacgaacgtgttataagtt-gtttctataacctctaccaaatagttttacaagggc 4534333  T
Q  177 ttatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    |||||  |||||||||||||||||||| ||||| ||||||||    
T  4534332 ttatgtgaatagataagctcaaataaatcaatcgaaacaggc 4534291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 21367648 - 21367725
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 121  Q
    ||||| ||||| |||||  | |||| |||||||||||||||| ||||| ||| |||||||||||||| |||| |||||    
T  21367648 aaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagctt 21367725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 90
Target Start/End: Complemental strand, 24235811 - 24235726
Alignment:
Q  5 tgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttgg 90  Q
    |||||||||| ||||| |||| |||||||| ||  ||||||| | |||  ||||||||| |||| |||||||||||||||| ||||    
T  24235811 tgtataagttatttctataacaaaagataatataaagtcaaactatttgaatataagctataagttgttttcataagctatattgg 24235726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 33405250 - 33405197
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaa 103  Q
    |||||||||||||| ||||||||||||||||||||| ||| | ||| |||||||    
T  33405250 ttttcatataagctataagctgttttcataagctatcttgaagaacttatgaaa 33405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 34254936 - 34254815
Alignment:
Q  6 gtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttc-atataagctctaagctgttttcataagctattttggataacatatgaaaa 104  Q
    ||||||| | |||||||| | || ||||||||  ||||||| | ||||  |||| |||| ||| || ||||||||||||||| |||| ||| |||| |||    
T  34254936 gtataagctatttctgtagcaaatgataaaataaagtcaaactgttttttatattagctataaactattttcataagctattctggagaacttatgtaaa 34254837  T
Q  105 taagctaaaaatagcttatgga 126  Q
    |||||| ||| |||||||||||    
T  34254836 taagctgaaagtagcttatgga 34254815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 218
Target Start/End: Original strand, 51929854 - 51929895
Alignment:
Q  177 ttatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  51929854 ttatgctaatagataagctcaaataagtcaatccaaacaggc 51929895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 133
Target Start/End: Complemental strand, 21862303 - 21862175
Alignment:
Q  6 gtataagttgtttctgtaactaaagataaaat-cgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaa 104  Q
    ||||||| ||||||| | || ||||||||||| | ||||||||| |||||||||||||| | ||  ||| |||| |||||| | ||| | | |||| |||    
T  21862303 gtataagctgtttctattacaaaagataaaatacaagtcaaattgttttcatataagctatgagtagttctcattagctatctgggagagcttatggaaa 21862204  T
Q  105 taagctaaaaatagcttatggacgtgtta 133  Q
    |||||| |||| | ||||||||| |||||    
T  21862203 taagctgaaaacaacttatggacatgtta 21862175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 38462219 - 38462303
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||| |||||| | ||||| || | |||||||||||  ||||||| | |||||||||| ||| ||| |||||||||||||||||    
T  38462219 tttatttataagctatttctataccaaaagataaaataaagtcaaactgttttcatatatgctataaactgttttcataagctat 38462303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 52618984 - 52619064
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| |||||||||||| | ||||||||||||| ||||||| ||| | | | | |||||||||| | |||||||||||||    
T  52618984 aaattgttttcatataagttataagctgttttcacaagctatcttgaagagcttgtgaaaataaggtgaaaatagcttatg 52619064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 5436241 - 5436304
Alignment:
Q  45 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 108  Q
    |||| |||||||||||| | || ||||||||||||  |||| ||||| ||||||||||||||||    
T  5436241 aattgttttcatataagttgtatgctgttttcatagactatcttggagaacatatgaaaataag 5436304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 16790439 - 16790384
Alignment:
Q  72 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    |||||||||||||| ||||||| | ||||||||||| || |||| |||||||||||    
T  16790439 ttttcataagctatcttggatagcttatgaaaataaactgaaaacagcttatggac 16790384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 9 - 80
Target Start/End: Complemental strand, 23952230 - 23952159
Alignment:
Q  9 taagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataa 80  Q
    |||||| ||||| |||| |||||||||||  ||||||| | ||||  |||||||| ||||||||||||||||    
T  23952230 taagttatttctataacaaaagataaaattaagtcaaagtatttttgtataagctgtaagctgttttcataa 23952159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 37689495 - 37689428
Alignment:
Q  22 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttg 89  Q
    |||| ||||||||| |  ||| ||||| |||||||||||||| ||| || ||||||||||||||||||    
T  37689495 taacaaaagataaagtaaagttaaattattttcatataagctataaactattttcataagctattttg 37689428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 41633362 - 41633509
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacag 164  Q
    |||||||||||||| |||||||||||| | | |||||||||||||| |||| |  |||| ||| ||| ||   ||||||| ||||| |||| | ||| ||    
T  41633362 taagctgttttcatcagctattttggagagcttatgaaaataagctgaaaacaatttatagacatgtcat-gatttgtttttataacctctcctgaatag 41633460  T
Q  165 tcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 215  Q
    ||| |  | ||  | ||| |||||||||||||||||||| |||||||||||    
T  41633461 tctcataagtg--tttgccaatagataagctcaaataaaccaatccaaaca 41633509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 2128326 - 2128256
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttata 135  Q
    |||||||||||||||||| || ||  | ||| |||||||||||||| |||| |||||||| || |||||||    
T  2128326 taagctgttttcataagccatcttttagaacgtatgaaaataagctgaaaacagcttatgaacatgttata 2128256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 10101601 - 10101527
Alignment:
Q  8 ataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 82  Q
    ||||||| ||||| |||| |||||||||||  ||| ||||| |||||||||||| |  ||| |||||||||||||    
T  10101601 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10101527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 10212526 - 10212452
Alignment:
Q  8 ataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 82  Q
    ||||||| ||||| |||| |||||||||||  ||| ||||| |||||||||||| |  ||| |||||||||||||    
T  10212526 ataagttatttctataacaaaagataaaataaagttaaattgttttcatataagataaaagttgttttcataagc 10212452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 86
Target Start/End: Original strand, 23315591 - 23315649
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    ||||||||||  ||||||||| |||||||||| ||| |||| ||||| |||||||||||    
T  23315591 aagataaaataaagtcaaattgttttcatataggctataagatgtttccataagctatt 23315649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 7 - 85
Target Start/End: Complemental strand, 24887409 - 24887331
Alignment:
Q  7 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||| | ||||| |||| | |||||||||  ||||||| | | ||||||||||||  ||||||||||||||||||||    
T  24887409 tataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctat 24887331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 28622074 - 28622008
Alignment:
Q  58 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||| |||||||||||||||| |||| || || ||| ||||||||||| || |||| ||||||||    
T  28622074 taagctataagctgttttcataaactatcttcgagaacttatgaaaataacctgaaaacagcttatg 28622008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 32582747 - 32582789
Alignment:
Q  66 aagctgttttcataagctattttggataacatatgaaaataag 108  Q
    |||||||||||||||||||||||||| ||| |||| |||||||    
T  32582747 aagctgttttcataagctattttggagaacttatggaaataag 32582789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43116560 - 43116478
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagct 83  Q
    ||||||| |||| | ||||| |||| |||||||||||| | |||||   |||||||||||||| ||||  |||||||||||||    
T  43116560 tttatgtgtaagctatttctataacaaaagataaaatcaaatcaaacaattttcatataagctataagtcgttttcataagct 43116478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 84
Target Start/End: Complemental strand, 48365010 - 48364928
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    ||||||||||||| ||||  |||| |||||||||||  ||||||||| ||||||| || ||  |||| ||||||||| |||||    
T  48365010 ttatgtataagttatttcgataacaaaagataaaataaagtcaaattgttttcatttacgccataagttgttttcattagcta 48364928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 235 - 277
Target Start/End: Original strand, 50760704 - 50760746
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaacatgcc 277  Q
    ||||||| ||| || ||||||||||||||||||||||||||||    
T  50760704 ttatgcttgtagatgagctcaaataagtcaatctaaacatgcc 50760746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 272
Target Start/End: Original strand, 584159 - 584196
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaac 272  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  584159 ttatgctagtagataagctcaaataagtcaatccaaac 584196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 244 - 273
Target Start/End: Complemental strand, 9832703 - 9832674
Alignment:
Q  244 taaataagctcaaataagtcaatctaaaca 273  Q
    ||||||||||||||||||||||||||||||    
T  9832703 taaataagctcaaataagtcaatctaaaca 9832674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 115
Target Start/End: Complemental strand, 14548804 - 14548739
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||||||||||| |||| |||||||||||| |||| |||| | | |||| ||||||||| ||||    
T  14548804 ttttcatataagctataagttgttttcataagttattctggagagcttatggaaataagctgaaaa 14548739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 21865563 - 21865604
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttgga 91  Q
    |||||||||||||| |||| |||||| |||||||||||||||    
T  21865563 ttttcatataagctataagttgttttgataagctattttgga 21865604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 25183071 - 25182994
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct-aaaaatagcttatgga 126  Q
    ||||||||| |||| |||||||||||||||||||||  |||| ||  | || ||||| ||| ||||||||||||||||    
T  25183071 ttttcatatgagctataagctgttttcataagctatcatggaaaatttgtggaaatatgctgaaaaatagcttatgga 25182994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 121
Target Start/End: Original strand, 30443886 - 30443951
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 121  Q
    |||| ||| ||||||||||| |||| |||| ||||| ||| |||||||||||||| |||| |||||    
T  30443886 tatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagctt 30443951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 107
Target Start/End: Complemental strand, 46886796 - 46886718
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 107  Q
    |||||||||||  ||| ||||| ||||  ||| |||| ||||||||||||||||||||| ||||| ||| | |||||||||    
T  46886796 aaagataaaat--agttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataa 46886718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 48364871 - 48364834
Alignment:
Q  234 tttatgctagtaaataagctcaaataagtcaatctaaa 271  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  48364871 tttatactagtaaataaactcaaataagtcaatctaaa 48364834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 48807811 - 48807848
Alignment:
Q  234 tttatgctagtaaataagctcaaataagtcaatctaaa 271  Q
    |||||||||||||||||||| |||||| ||||||||||    
T  48807811 tttatgctagtaaataagcttaaataactcaatctaaa 48807848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 218
Target Start/End: Complemental strand, 53762351 - 53762310
Alignment:
Q  177 ttatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    |||||||| |||||||||||||||||| |||||||| |||||    
T  53762351 ttatgctagtagataagctcaaataaaccaatccaagcaggc 53762310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 901931 - 901987
Alignment:
Q  70 tgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    |||||| ||||||||| ||||| ||| |||||||||||| | |||| ||||||||||    
T  901931 tgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgga 901987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 3775846 - 3775770
Alignment:
Q  139 ttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaaca 215  Q
    ||||||||||||||||| |  |||||||| || | || |||||| | ||||||| |||||||||  |||||||||||    
T  3775846 ttgtttctataagctctgccaaacagtctaacaattgtttatgccagtagataaactcaaataaggcaatccaaaca 3775770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 4990689 - 4990629
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataag 61  Q
    |||||||||||||| |||||||| | || ||||||||  ||||||| | ||||||||||||    
T  4990689 tttatgtataagttatttctgtatcaaaggataaaatgaagtcaaacttttttcatataag 4990629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 20874392 - 20874352
Alignment:
Q  45 aattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||| ||||||||||| || |||||||||||||||||||||    
T  20874392 aattgttttcatataaactataagctgttttcataagctat 20874352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 20880469 - 20880537
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||| ||| ||| ||||||| | ||||||| ||||| ||| |||||||||||||| |||| ||||||||    
T  20880469 tatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatg 20880537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 41 - 85
Target Start/End: Complemental strand, 21872363 - 21872319
Alignment:
Q  41 gtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||| |||| ||||||||| |||| ||||||||||||||||    
T  21872363 gtcaaatttttttgatataagctataagttgttttcataagctat 21872319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 39602287 - 39602235
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataag 108  Q
    |||||| | ||||||||||||||||||||| || || ||| ||||||||||||    
T  39602287 tataagttataagctgttttcataagctatctttgagaacttatgaaaataag 39602235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 247 - 279
Target Start/End: Original strand, 43046789 - 43046821
Alignment:
Q  247 ataagctcaaataagtcaatctaaacatgccct 279  Q
    ||||| |||||||||||||||||||||||||||    
T  43046789 ataagttcaaataagtcaatctaaacatgccct 43046821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 161 - 225
Target Start/End: Original strand, 43948751 - 43948815
Alignment:
Q  161 acagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggcttagtct 225  Q
    ||||||| || ||||||||||  ||||||| | ||||||| |  |||||||||||||||||||||    
T  43948751 acagtctcacaaatgcttatgacaatagattaactcaaattagccaatccaaacaggcttagtct 43948815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 51929853 - 51929897
Alignment:
Q  234 tttatgctagtaaataagctcaaataagtcaatctaaacatgccc 278  Q
    ||||||||| || ||||||||||||||||||||| ||||| ||||    
T  51929853 tttatgctaatagataagctcaaataagtcaatccaaacaggccc 51929897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 4622040 - 4622157
Alignment:
Q  10 aagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagc 109  Q
    ||||| ||||| |||| |||||| ||||  | ||||| |||||||||||||||| |||||||||| |||| ||||| ||||| | | | |||||||||||    
T  4622040 aagttatttctataacaaaagatcaaatgaattcaaactcttttcatataagctataagctgtttccatatgctatcttggagagcttgtgaaaataagc 4622139  T
Q  110 taaaaatagcttatggac 127  Q
    |||||| |||||||||||    
T  4622140 taaaaacagcttatggac 4622157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 5 - 84
Target Start/End: Original strand, 49517012 - 49517091
Alignment:
Q  5 tgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    |||||||||| ||||| |||| |||||||||||  ||||||||| ||||||| |||||| ||||||||||||||||||||    
T  49517012 tgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttcataagcta 49517091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 48830208 - 48830123
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    |||||||||||||| ||||| | || |||||||||||  ||||||| | |||||||||||||| ||| ||||||||||||||||||    
T  48830208 tttatgtataagttatttctattaccaaagataaaataaagtcaaactattttcatataagctataaactgttttcataagctatt 48830123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 44032131 - 44032005
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 100  Q
    ||||||||||||  |||||| |||| |||| ||||||  ||||||||| |||||||||||||| ||| || ||||| |||| ||| ||| | | | ||||    
T  44032131 tttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttatcttgaagagcttatg 44032032  T
Q  101 aaaataagctaaaaatagcttatggac 127  Q
     |||| |||| ||||||||||||||||    
T  44032031 gaaattagctgaaaatagcttatggac 44032005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 124
Target Start/End: Original strand, 9656618 - 9656711
Alignment:
Q  31 ataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||  ||| ||||| |||||||||||||| |||||||| ||||||||||||  ||||| |  |||||||||||||| |||| ||||||||    
T  9656618 ataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggatgaattatgaaaataagctcaaaacagcttatg 9656711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 7137075 - 7137007
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| || ||||||||||||||||||||| ||||| ||| |||||||||||||| |||||| ||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatg 7137007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 7218180 - 7218076
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    |||| ||||||  ||||||||| |||||||||||||| |||| ||||||||||| ||||  |||| ||| |||||||||||| | |||| ||||| || |    
T  7218180 aaaggtaaaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacagcttgtgaa 7218081  T
Q  127 cgtgt 131  Q
    |||||    
T  7218080 cgtgt 7218076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 27 - 202
Target Start/End: Complemental strand, 31517846 - 31517672
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    |||||||||||  ||| |||||  ||||||||||||| |||||||| ||||||| || | ||||| | | |||||||||||||| |||| |||||||| |    
T  31517846 aaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaa 31517747  T
Q  127 cgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 202  Q
    | ||| ||  | ||||||  ||||| ||| |  |||||||| || | ||||||||| | || ||||||||||||||    
T  31517746 catgtcatgag-ttgttttgataagttctcccaaacagtctcacaagtgcttatgccagtaaataagctcaaataa 31517672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 124
Target Start/End: Original strand, 16322813 - 16322910
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||||||  ||||||| | |||||||| ||| | ||||||||||||||| ||||||||| | | | |||| |||||||||||||| | ||||||    
T  16322813 aaagataaaatatagtcaaactattttcatagaagttataagctgttttcataggctattttgaagagcttatggaaataagctaaaaacaacttatg 16322910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 23544746 - 23544657
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagct-ctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||||||||  ||||||||| ||||||||||||||  ||| ||||||||||||||||| | ||| ||| |||||| ||| ||||||||    
T  23544746 aaagataaaattaagtcaaattgttttcatataagctattaaactgttttcataagctatctcggaaaacttatgaacatacgctaaaaa 23544657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 124
Target Start/End: Complemental strand, 28482315 - 28482242
Alignment:
Q  51 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||||||| ||||||||||| ||||| ||| ||||| | | || ||||||||||||||||||| |||||    
T  28482315 tttcatataagctataagctgtttttataagttatcttggagagcttacgaaaataagctaaaaatagtttatg 28482242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 22 - 127
Target Start/End: Original strand, 30371107 - 30371212
Alignment:
Q  22 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 121  Q
    |||| |||||||||||  | ||||||| |||||||||||||| |||| ||||||||||||  |||||||| | | |||  ||||||||| |||| | |||    
T  30371107 taacaaaagataaaataaactcaaattgttttcatataagctataagttgttttcataagacattttggagagcgtattgaaataagctgaaaacaactt 30371206  T
Q  122 atggac 127  Q
    ||||||    
T  30371207 atggac 30371212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 51695600 - 51695504
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||||||  ||| ||||| ||||| |||||| | | || |||||||||||||||| ||||| ||  |||||||||||||| |||||||||||||    
T  51695600 aaagataaaataaagt-aaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatg 51695504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 124
Target Start/End: Complemental strand, 10199533 - 10199417
Alignment:
Q  8 ataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 107  Q
    ||||||| ||||| ||||  ||||||||||  ||||||| | ||||| ||||| |  |||||| ||||||||||||||||| || | | |||||||||||    
T  10199533 ataagttatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatgaaaataa 10199434  T
Q  108 gctaaaaatagcttatg 124  Q
    ||| |||| | ||||||    
T  10199433 gctgaaaacaacttatg 10199417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 27820414 - 27820346
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||| || |||||||| ||||||||| ||||| ||  |||||||||||||| |||||||||||||    
T  27820414 tataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatg 27820346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 34290229 - 34290297
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||| ||||||||||||||||||||| ||| | ||| |||||||||||||| |||| | ||||||    
T  34290229 tataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatg 34290297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 35179141 - 35179201
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgg 125  Q
    ||||||||||||||||| |||| |||| ||| |||||||||||||| |||| |||||||||    
T  35179141 taagctgttttcataagttattatggagaacttatgaaaataagctgaaaacagcttatgg 35179201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 45975683 - 45975751
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||  |||||||||||||||||||| ||||| ||  |||||||||||||| |||| ||||||||    
T  45975683 tataagctacaagctgttttcataagctatcttggagaatttatgaaaataagctgaaaacagcttatg 45975751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 217
Target Start/End: Complemental strand, 6231899 - 6231733
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctata 149  Q
    ||||||||||| || |||||||||||| |||||||   || | ||| |||  ||||||||| |||| || |||||||| ||| || |  ||||||| ||     
T  6231899 ttttcatataatctataagctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttatggacatgtcat-tagttgtttccatg 6231801  T
Q  150 agctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacagg 217  Q
    |||| | | ||||| ||| || |||| |||||||| ||||||| |||||||||| |||| ||||||||    
T  6231800 agctatccagaacaatctcacaaatgtttatgctagtagataacctcaaataaaccaattcaaacagg 6231733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 85
Target Start/End: Original strand, 17269189 - 17269272
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||||||| |||||  ||| ||||  |||||  ||||||||| |||||||||||||  |||| ||||||||||||||||    
T  17269189 ttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctat 17269272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 25006127 - 25006076
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctattttgga 91  Q
    ||||||||| |||||||||||||| |||| |||||||||||||||| |||||    
T  25006127 agtcaaattgttttcatataagctataagttgttttcataagctatcttgga 25006076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 15361690 - 15361736
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  15361690 agtcaaattattttcatataagctataagctgttttcataagatatt 15361736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 27738286 - 27738228
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||  ||||||||| |||||||||||||| |||  ||||||||||||||||    
T  27738286 aaagataaaataaagtcaaattgttttcatataagctataatttgttttcataagctat 27738228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 28467418 - 28467356
Alignment:
Q  22 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    |||| |||||||||||  ||||||||| ||||||||||||||  ||| |||||||||||||||    
T  28467418 taacaaaagataaaataaagtcaaattattttcatataagctacaagttgttttcataagcta 28467356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 235 - 273
Target Start/End: Complemental strand, 42556563 - 42556525
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaaca 273  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  42556563 ttatgctagtatataagctcaaataagtcaatctaaaca 42556525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 4576807 - 4576852
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagct 110  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||    
T  4576807 taagctgttttcataagctatattgaataacttatgaaaataagct 4576852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 24 - 85
Target Start/End: Complemental strand, 33204497 - 33204436
Alignment:
Q  24 actaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||||||||  ||| || || ||||| |||||||| |||||||||||||||||||||    
T  33204497 actaaagataaaataaagttaatttattttcgtataagctgtaagctgttttcataagctat 33204436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 122
Target Start/End: Complemental strand, 39603899 - 39603842
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    |||| |||||| ||| ||||||||||||| | |||||||||||||| |||||||||||    
T  39603899 taagttgtttttatatgctattttggatagcttatgaaaataagctgaaaatagctta 39603842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 27 - 120
Target Start/End: Original strand, 49888731 - 49888824
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 120  Q
    |||||||||||  |||  |||| ||||| |||||||| | || |||||||||||||||| || || ||| |||||||||||||  |||||||||    
T  49888731 aaagataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaatagct 49888824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 124
Target Start/End: Original strand, 6292470 - 6292554
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||| |||||| ||||  | |||||| ||||| ||| |||||||||| | | |||||||||||||| |||| ||||||||    
T  6292470 agtcaaattattttcacataacttataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatg 6292554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 215
Target Start/End: Original strand, 12763419 - 12763475
Alignment:
Q  160 aacagtcttaccaatgcttatgctaatagataagctc-aaataaaacaatccaaaca 215  Q
    ||||||||||| ||||||||||||||||||||| ||| ||||||  |||||||||||    
T  12763419 aacagtcttacaaatgcttatgctaatagataaactcaaaataagccaatccaaaca 12763475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 124
Target Start/End: Complemental strand, 24915156 - 24915060
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||||||||  ||| ||||| ||||  |||| ||| ||||||||||||||||||| | ||||| ||| | |||||||||| | |||| ||||||||    
T  24915156 aagataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatg 24915060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 115
Target Start/End: Original strand, 25479525 - 25479633
Alignment:
Q  7 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 106  Q
    |||||| | ||||| |||| |||||||||||   |||||||| | |||||||| ||| |||| ||||||||||||||||  | || | | ||||||||||    
T  25479525 tataagatctttctataaccaaagataaaataacgtcaaattgtcttcatataggctataagttgttttcataagctatcctagagagcttatgaaaata 25479624  T
Q  107 agctaaaaa 115  Q
    |||| ||||    
T  25479625 agctgaaaa 25479633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 27963452 - 27963376
Alignment:
Q  51 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    ||||||| ||| |||||| ||||||||||||||||| |||| | | |||  |||||||||||||| | |||||||||    
T  27963452 tttcataaaagttctaagttgttttcataagctattatggagagcttatataaataagctaaaaacaacttatggac 27963376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 28689537 - 28689458
Alignment:
Q  50 ttttcatataagctctaagctgttttcata--agctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    |||||||||||||| |||| ||||||||||  |||||| ||||| | | |||||||||||||| |||| | |||||||||    
T  28689537 ttttcatataagctataagttgttttcatataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggac 28689458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 115
Target Start/End: Complemental strand, 38867909 - 38867849
Alignment:
Q  55 atataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||||||| ||| ||||||||||||| ||| ||| | ||| |||||||||||||||||||    
T  38867909 atataagctttaaactgttttcataagttatcttgaagaacttatgaaaataagctaaaaa 38867849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 74
Target Start/End: Complemental strand, 49365878 - 49365818
Alignment:
Q  14 tgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttt 74  Q
    |||||| ||||| ||||||||||| |||||||||| |||||||| ||||| ||| ||||||    
T  49365878 tgtttcagtaacaaaagataaaatagagtcaaattgttttcatacaagctataaactgttt 49365818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 282
Target Start/End: Original strand, 11695975 - 11696021
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaacatgccctaat 282  Q
    |||||||| |||||||||||||||||||||||| ||||| ||||||||    
T  11695975 ttatgctaataaataagctcaaataagtcaatccaaaca-gccctaat 11696021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 15360832 - 15360899
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaag 68  Q
    ||||||||| |||| ||||| |||| |||||||||||  ||||||| | |||||||||||||| ||||    
T  15360832 tttatgtattagttatttctataacaaaagataaaataaagtcaaactgttttcatataagctataag 15360899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 122
Target Start/End: Original strand, 25944420 - 25944491
Alignment:
Q  51 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    |||||| |||| | ||||| |||||||||||||||  ||||| |  |||||||||||||| |||||||||||    
T  25944420 tttcatgtaagttataagcggttttcataagctatcctggattaattatgaaaataagctgaaaatagctta 25944491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 2 - 81
Target Start/End: Complemental strand, 33527278 - 33527199
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 81  Q
    ||||| ||||| | |||||  ||| |||||||||||  ||||||| | ||||||||||| || |||||||||||||||||    
T  33527278 ttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataag 33527199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 72 - 115
Target Start/End: Original strand, 38189773 - 38189816
Alignment:
Q  72 ttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||    
T  38189773 ttttcttaagctattttggataacttatgaagataagctaaaaa 38189816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 39270506 - 39270431
Alignment:
Q  52 ttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    |||||||||| | ||||||||||||||||||||   | || | |||||||||||||| | |||| |||||||||||    
T  39270506 ttcatataagatataagctgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggac 39270431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 1255537 - 1255479
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||| ||||  |||||||||||||||||| ||| | |||||||||||||| ||||||    
T  1255537 aaagatgaaatgaagtcaaattcttttcatacaagttataagctgttttcattagctat 1255479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 2294905 - 2294975
Alignment:
Q  57 ataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    ||||||| |||||| ||||||||| |||| ||||| ||| || ||||||||| | |||| |||||||||||    
T  2294905 ataagctataagctattttcataaactatcttggagaacttacgaaaataaggtgaaaacagcttatggac 2294975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 4200167 - 4200289
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 100  Q
    ||||| |||||||| ||| | |||| |||||||||||  |||||| || |||||||||||||| ||   ||||||| |||| |||  ||||   | ||||    
T  4200167 tttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatatcctggagggcttatg 4200266  T
Q  101 aaaataagctaaaaatagcttat 123  Q
    |||||||||| |||| |||||||    
T  4200267 aaaataagcttaaaacagcttat 4200289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 213
Target Start/End: Complemental strand, 4549536 - 4549462
Alignment:
Q  139 ttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaa 213  Q
    ||||||||||||||||| |  |||||||| |  ||||||||||| | ||||||| |||||||||  |||||||||    
T  4549536 ttgtttctataagctctcccaaacagtctcagaaatgcttatgccagtagataatctcaaataagccaatccaaa 4549462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 5422026 - 5421968
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||  ||||||||| ||||| |||||||| |||| |||||| |||||||||    
T  5422026 aaagataaaatatagtcaaattgttttcttataagctataagttgttttgataagctat 5421968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 68 - 122
Target Start/End: Complemental strand, 16145035 - 16144981
Alignment:
Q  68 gctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    |||| |||||||| |||| ||| ||||| ||||||||||| ||||||||||||||    
T  16145035 gctgctttcataaactatcttgaataacttatgaaaataacctaaaaatagctta 16144981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 25005890 - 25005808
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    |||||| || |||||||||||||| |||| ||||||||||||||||  |||| | | ||| |||| ||||| |||||| ||||    
T  25005890 agtcaacttgttttcatataagctataagttgttttcataagctatcctggagagcttataaaaacaagcttaaaatatctta 25005808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 275
Target Start/End: Original strand, 28467548 - 28467586
Alignment:
Q  237 atgctagtaaataagctcaaataagtcaatctaaacatg 275  Q
    |||||||||||||| |||||||||||||||| |||||||    
T  28467548 atgctagtaaataaactcaaataagtcaatccaaacatg 28467586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 37631517 - 37631475
Alignment:
Q  176 cttatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    ||||||||||||||| |||||||||||  ||||||||||||||    
T  37631517 cttatgctaatagatgagctcaaataagccaatccaaacaggc 37631475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 123
Target Start/End: Complemental strand, 41195257 - 41195203
Alignment:
Q  69 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 123  Q
    |||||||||||| |||| ||||| ||| |||||||||||||| |||| |||||||    
T  41195257 ctgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttat 41195203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 112
Target Start/End: Original strand, 1432479 - 1432564
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaa 112  Q
    ||||||||||| ||||  |||| ||||  |||||||| |||  ||||||||||| |||| ||||| ||| ||||||| ||||||||    
T  1432479 aaagataaaatagagttcaattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaaagtaagctaa 1432564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 2777885 - 2778040
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctct 155  Q
    |||||||| ||||||||||| ||||| ||  ||||| ||| |||||||||||||| ||||  ||||||| |   || ||| ||| ||||| ||||| |||    
T  2777885 tataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaatacgtcataagttggtttc-ataagttct 2777983  T
Q  156 tcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaa 213  Q
     |  |||||||| | |||  ||||||| |||||||||||| ||||||  |||||||||    
T  2777984 cctaaacagtctca-caaaacttatgcaaatagataagctaaaataagccaatccaaa 2778040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 84
Target Start/End: Complemental strand, 5592791 - 5592734
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    |||||||||||  |||| |||| || ||||||||||| |||| |||||||||||||||    
T  5592791 aaagataaaataaagtcgaattgttgtcatataagctataagttgttttcataagcta 5592734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 124
Target Start/End: Original strand, 6774976 - 6775048
Alignment:
Q  51 tttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||||||||  |||||||||||| ||||||| ||| | |||||| | ||||||||| |||| ||||||||    
T  6774976 tttcatataagcta-aagctgttttcacaagctatcttgaagaacataagtaaataagctgaaaacagcttatg 6775048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 7472251 - 7472363
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    |||| |||||| | ||||| |||| ||||||| |||  ||| ||||| ||||  ||||| || |||||||||| |||||||||| ||||| | | |||||    
T  7472251 ttatttataagctatttctataacaaaagatataata-agttaaattgtttttgtataatctataagctgtttccataagctatcttggagagcttatga 7472349  T
Q  102 aaataagctaaaaa 115  Q
    ||||||||| ||||    
T  7472350 aaataagctgaaaa 7472363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 121
Target Start/End: Original strand, 7941615 - 7941664
Alignment:
Q  72 ttttcataagctattttggataacatatgaaaataagctaaaaatagctt 121  Q
    |||||||||||||||| ||| ||| |||||||||||| | ||||||||||    
T  7941615 ttttcataagctatttcggagaacttatgaaaataagttgaaaatagctt 7941664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 271
Target Start/End: Original strand, 24279861 - 24279898
Alignment:
Q  234 tttatgctagtaaataagctcaaataagtcaatctaaa 271  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  24279861 tttatgctagtaaataagttcaaataagacaatctaaa 24279898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 121
Target Start/End: Original strand, 26630444 - 26630521
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 121  Q
    ||||| |||||||||||||| ||| ||||||| ||| |||||  |||| |||||||| |||||| || |||| |||||    
T  26630444 aaattgttttcatataagctataaactgttttgatacgctatcctggagaacatatggaaataaacttaaaaaagctt 26630521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 27887197 - 27887136
Alignment:
Q  54 catataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||||||| |||| ||||||||||| ||||  |||| | ||||| |||||||||||||||    
T  27887197 catataagctataagttgttttcataaactatcatggagagcatataaaaataagctaaaaa 27887136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 1662686 - 1662722
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaa 271  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  1662686 ttatgctagtagataagctcaaataagccaatctaaa 1662722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 4548685 - 4548773
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||||||||  ||||||| | |||| ||| |||   ||||||||||||||||||||| ||||| | | |  ||||||||||||||||    
T  4548685 aaagataaaataaagtcaaactgtttttatacaagtcataagctgttttcataagctatcttggagagcttcagaaaataagctaaaaa 4548773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 10581180 - 10581124
Alignment:
Q  30 gataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    ||||||||  ||||||| | ||||||| |||||| |||| |||||||||||||||||    
T  10581180 gataaaataaagtcaaacttttttcatttaagctataagttgttttcataagctatt 10581124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 11211062 - 11211182
Alignment:
Q  7 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 106  Q
    |||||||| |||||  ||| |||||||||||  ||| ||||| |||||||||||| |  || || |||||||||||| || |||| |   |||| |||||    
T  11211062 tataagttatttctagaacaaaagataaaataaagttaaatttttttcatataagataaaaactattttcataagctgttatggagagtttatggaaata 11211161  T
Q  107 agctaaaaatagcttatggac 127  Q
    || |||||| | |||||||||    
T  11211162 agttaaaaacaacttatggac 11211182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 11695974 - 11696014
Alignment:
Q  176 cttatgctaatagataagctcaaataaaacaatccaaacag 216  Q
    |||||||||||| ||||||||||||||  ||||||||||||    
T  11695974 cttatgctaataaataagctcaaataagtcaatccaaacag 11696014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 218
Target Start/End: Original strand, 17420190 - 17420356
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctata 149  Q
    |||||||||||||| ||| |||||||| |||||||| |  || |||  ||| ||||||| | |||| |  |||||||| ||| ||| | ||||||  |||    
T  17420190 ttttcatataagctataaactgttttcgtaagctatctcagaaaactaatggaaataagttgaaaacaatttatggacatgtaataag-ttgttttcata 17420288  T
Q  150 agctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    ||||||||  |||||||| || | || ||||||||||| | || |||||||||| ||||  ||||||||    
T  17420289 agctcttcaaaacagtctaacaagtgtttatgctaata-aaaaactcaaataaaccaattgaaacaggc 17420356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 29007847 - 29007771
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcat 78  Q
    |||||| |||||| ||||| |||| ||||| ||| |  ||||||| | |||||||||||||| |||| |||||||||    
T  29007847 ttatgtctaagttatttctataacaaaagaaaaattaaagtcaaactattttcatataagctataagttgttttcat 29007771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 29723602 - 29723634
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatc 267  Q
    |||||||||||||||||||||||| ||||||||    
T  29723602 ttatgctagtaaataagctcaaattagtcaatc 29723634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32958590 - 32958678
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttg 89  Q
    |||| ||||||| | ||||| | || |||||||||||  ||||||| | |||||| ||||||| ||| | |||||||||| ||||||||    
T  32958590 tttacgtataagctctttctatcaccaaagataaaattaagtcaaactattttcagataagctataaacagttttcataaactattttg 32958678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 42174848 - 42174916
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||| ||| |||| |||||| ||||| ||| ||||| ||| |||||||||||| |||||| ||||||||    
T  42174848 tatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatg 42174916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 44422686 - 44422746
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 110  Q
    |||||||||||||| |||||| |||| |||||||||  |||| | | ||||||||||||||    
T  44422686 ttttcatataagctataagctatttttataagctatcctggagagcttatgaaaataagct 44422746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 4e-17; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 123
Target Start/End: Original strand, 6364088 - 6364209
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||| | ||||| |||| |||||||||||  ||| ||||||| |||| ||||||| |||||  ||||||||||||||  |||| ||| || ||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctataatggagaacttacga 6364187  T
Q  102 aaataagctaaaaatagcttat 123  Q
    ||||||||| |||| |||||||    
T  6364188 aaataagctgaaaacagcttat 6364209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 42685388 - 42685476
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||||||||  ||| ||||| ||||  ||||||||||||| |||||||||||||||||||||| ||| | ||||||||||| |||||    
T  42685388 aaagataaaatgaagttaaattgtttttttataagctctaagttgttttcataagctattttggagaacgtgtgaaaataagccaaaaa 42685476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 2996538 - 2996637
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    ||||||||||  ||||||||| |||| ||||||| | |||| |||||||||||||||| ||||| | | |||||||||||| | |||| |||||||||||    
T  2996538 aagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggac 2996637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 23459592 - 23459777
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    |||||||||||  ||| || || ||||| |||||||| |||||||||||||||||  || ||| | ||| |||||| ||||| | |||||| |||||  |    
T  23459592 aaagataaaatgaagttaagttgttttcttataagctataagctgttttcataagagatcttgaaaaacttatgaatataagttgaaaataacttattaa 23459691  T
Q  127 cgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaac 214  Q
    | ||| ||| | || |||| ||||| ||| || |||||||||||| || ||||||||| ||||||||||||||||   ||||||||||    
T  23459692 catgtcataagcttttttc-ataagttctccgaaacagtcttacc-atacttatgctagtagataagctcaaatatgccaatccaaac 23459777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 11802488 - 11802596
Alignment:
Q  17 ttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaat 116  Q
    |||| |||| |||||||||||  ||||||||| || ||| |||||||  ||| ||||||||||||||||| |||| | | ||||| |||||||| ||||     
T  11802488 ttctataacaaaagataaaataaagtcaaatttttctcacataagctacaagttgttttcataagctattatggagagcttatgagaataagctgaaaac 11802587  T
Q  117 agcttatgg 125  Q
    |||||||||    
T  11802588 agcttatgg 11802596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 17822942 - 17822874
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||| ||| |||| |||||||||||||||| ||||| ||| ||||||||||||||||||| ||||||||    
T  17822942 tatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatg 17822874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 6 - 85
Target Start/End: Original strand, 49219082 - 49219161
Alignment:
Q  6 gtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||||||| ||||| |||| ||| |||||||  ||||||||| |||||||||||||| |||| ||||||||||| ||||    
T  49219082 gtataagttatttctataacaaaatataaaataaagtcaaattattttcatataagctataagttgttttcataaactat 49219161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 69 - 202
Target Start/End: Original strand, 28615529 - 28615662
Alignment:
Q  69 ctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgt-ttctataagctcttcggaacagtct 167  Q
    ||||||| ||| ||||| ||||| | | |||| ||||||| | |||||| || |||||| ||| ||| ||| || |||| ||||||||||| ||||||||    
T  28615529 ctgtttttataggctatcttggagagcttatggaaataaggtgaaaatatctaatggacatgtcataagttggtattct-taagctcttcgaaacagtct 28615627  T
Q  168 taccaatgcttatgctaatagataagctcaaataa 202  Q
    ||| ||||||||||  | |||||||||||||||||    
T  28615628 tacaaatgcttatgtcattagataagctcaaataa 28615662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 123
Target Start/End: Original strand, 20031730 - 20031810
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct-aaaaatagcttat 123  Q
    ||||| ||||||| |||||| ||||| |||||||||||||||||| || ||| ||||||||| |||| ||||| |||||||    
T  20031730 aaattgttttcatgtaagctataagcagttttcataagctattttagagaacttatgaaaatgagctgaaaaacagcttat 20031810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 51630075 - 51630163
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||||||||  ||| ||||| |||| ||||||||| |||||| |||||||||||||| ||| | ||  |||||||||||||| ||||    
T  51630075 aaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaataagctgaaaa 51630163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 100
Target Start/End: Original strand, 53626729 - 53626813
Alignment:
Q  16 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatg 100  Q
    ||||| |||| |||||||||||  | ||||| | |||||||||||||| |||||||||||||||||| ||| |||| || |||||    
T  53626729 tttctataacaaaagataaaataaattcaaaatgttttcatataagctataagctgttttcataagcgattatggacaatatatg 53626813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 112
Target Start/End: Complemental strand, 942184 - 942129
Alignment:
Q  57 ataagctctaagctgttttcataagctattttggataacatatgaaaataagctaa 112  Q
    ||||| |||||||||||||||||||||||| |||| ||| ||| ||||||||||||    
T  942184 ataagttctaagctgttttcataagctattatggagaacttataaaaataagctaa 942129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 6 - 81
Target Start/End: Original strand, 8130117 - 8130192
Alignment:
Q  6 gtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 81  Q
    |||| |||| ||||| |||| |||||||| ||  ||||||||| |||||||||||||| ||| |||||||||||||    
T  8130117 gtatgagttctttctataacaaaagataacataaagtcaaattattttcatataagctataaactgttttcataag 8130192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 50 - 139
Target Start/End: Original strand, 9841053 - 9841141
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct-aaaaatagcttatggacgtgttatatgtt 139  Q
    |||||||||||||| |||| ||||||||||||||||  |||  ||| | |||||||||||| ||||| ||||||||||| ||| |||||||    
T  9841053 ttttcatataagctataagatgttttcataagctatcctgg--aacttgtgaaaataagctgaaaaacagcttatggacatgtcatatgtt 9841141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 56 - 115
Target Start/End: Complemental strand, 16200058 - 16199999
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||| ||| ||||||||||||||||||||| |||||  || |||||||||||||||||||    
T  16200058 tatatgctataagctgttttcataagctatcttggaggacttatgaaaataagctaaaaa 16199999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 2 - 89
Target Start/End: Original strand, 24160929 - 24161016
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttg 89  Q
    ||||||||||| | ||||| |||| || ||||||||| ||| ||||| ||||||| || ||| |||| ||| ||||||||||||||||    
T  24160929 ttatgtataagctatttctataacaaaggataaaatcaagttaaattattttcatgtaggctataagttgtgttcataagctattttg 24161016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 44319913 - 44320099
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    |||||||||||  |||| || | ||||||||||||||  ||||| |||| |||||||||  | || ||| ||||||||| || | ||||||||| |||||    
T  44319913 aaagataaaataaagtcgaactgttttcatataagctacaagctattttgataagctatcctagagaacttatgaaaattagttgaaaatagctaatgga 44320012  T
Q  127 cgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaac 214  Q
        | |||  |||||||  ||||||||| |  |||||||| || | || |||||| ||||| |||||||||||||| ||||||||||    
T  44320013 tacatcataa-tttgttttcataagctctcccaaacagtctcacaattgtttatgccaataggtaagctcaaataaaccaatccaaac 44320099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 236 - 279
Target Start/End: Complemental strand, 44638182 - 44638139
Alignment:
Q  236 tatgctagtaaataagctcaaataagtcaatctaaacatgccct 279  Q
    ||||||||||||||| |||||||||||||||| |||||||||||    
T  44638182 tatgctagtaaataaactcaaataagtcaatccaaacatgccct 44638139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 27043961 - 27043835
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||| |  || | |||| || ||||||||  ||| ||||| ||||| |||||||| |||| |||||| |||| |||| ||||| ||| |||||    
T  27043961 ttatgtataaggtacttatataacaaaggataaaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtatga 27043862  T
Q  102 aaataagctaaaaatagcttatggacg 128  Q
    | |||||||||||| |  |||||||||    
T  27043861 atataagctaaaaacaatttatggacg 27043835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 52735075 - 52735173
Alignment:
Q  16 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaa 114  Q
    |||||||||| |||||||||||  |||||||||  ||||||||||| | || | ||||||| |||||||| ||| | | | |||| |||||||||||||    
T  52735075 tttctgtaacaaaagataaaataaagtcaaattactttcatataagttatatgttgttttcgtaagctatcttgaagagcttatggaaataagctaaaa 52735173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 4071835 - 4071904
Alignment:
Q  16 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||| |||| |||||||||||  ||||||||| |||||||||||||| |||| |||| | |||||||||    
T  4071835 tttctataacaaaagataaaataaagtcaaattattttcatataagctataagttgttatgataagctat 4071904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 2 - 107
Target Start/End: Original strand, 26883934 - 26884039
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||||| ||||| |||  | |||||||||  ||| ||||| |||||||||||||| ||||  |||||| ||| || | ||||| ||| |||||    
T  26883934 ttatgtataagttatttctctaagaagagataaaatgaagttaaattgttttcatataagctataagtcgttttcgtaaactttattggagaacctatga 26884033  T
Q  102 aaataa 107  Q
    ||||||    
T  26884034 aaataa 26884039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 55302251 - 55302308
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    ||||||||| ||||||||||| ||||| ||| |||||||||||||| |||| ||||||    
T  55302251 taagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagctta 55302308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 825552 - 825508
Alignment:
Q  71 gttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||||||||||||||||||| ||| |||||||||||||| ||||    
T  825552 gttttcataagctattttggagaacttatgaaaataagctgaaaa 825508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 35958593 - 35958677
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||| | ||||| ||||  ||| ||||||  |||||||||  ||| |||||||||  ||||||||||||||||||||    
T  35958593 tttatgtataagctatttctataacataagttaaaataaagtcaaatttgttttatataagctagaagctgttttcataagctat 35958677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 110
Target Start/End: Complemental strand, 437538 - 437455
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 110  Q
    |||||||||||  ||| ||||| | |||||||||| | |||| ||||||||||||||||||| ||   | ||||||||||||||    
T  437538 aaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctattttagaggccttatgaaaataagct 437455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 124
Target Start/End: Original strand, 1706604 - 1706683
Alignment:
Q  45 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||| ||||| || ||||| |||||||||||||||| |||| ||||| | | |||||||||||| |  ||||||||||||    
T  1706604 aattgttttcgtagaagctataagctgttttcataaactatcttggacagcttatgaaaataagttggaaatagcttatg 1706683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 247 - 282
Target Start/End: Complemental strand, 10205886 - 10205851
Alignment:
Q  247 ataagctcaaataagtcaatctaaacatgccctaat 282  Q
    ||||||||||||||||||||||||||||||| ||||    
T  10205886 ataagctcaaataagtcaatctaaacatgccataat 10205851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 172 - 215
Target Start/End: Original strand, 22796763 - 22796806
Alignment:
Q  172 aatgcttatgctaatagataagctcaaataaaacaatccaaaca 215  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||    
T  22796763 aatgcttatgctagtagataaactcaaataaatcaatccaaaca 22796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 24444025 - 24444068
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggata 93  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||    
T  24444025 ttttcatataagctataagttgttttcataagctattgtggata 24444068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 25487544 - 25487489
Alignment:
Q  147 ataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataa 202  Q
    |||||||||||  |||| |||||| | ||||||||||||||||||| |||||||||    
T  25487544 ataagctcttccaaacaatcttacaagtgcttatgctaatagataaactcaaataa 25487489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 36460530 - 36460605
Alignment:
Q  7 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagc 82  Q
    |||||||| ||||  |||| |||||||| ||| || || | | |||||||||||||| ||||||||||||||||||    
T  36460530 tataagttatttcgataacaaaagataagatcaagccacactgttttcatataagctataagctgttttcataagc 36460605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 127
Target Start/End: Original strand, 40174544 - 40174627
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggac 127  Q
    ||||| |||||||| ||||| ||||||||||||||||||||  ||||| ||| | ||| |||||| | |||| || ||||||||    
T  40174544 aaattgttttcataaaagctataagctgttttcataagctacattggagaacttgtgataataagttgaaaacagtttatggac 40174627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 87
Target Start/End: Original strand, 52754581 - 52754624
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattt 87  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||    
T  52754581 aaatccttttcacataagctataagctgttttcataagctattt 52754624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 216
Target Start/End: Original strand, 53315360 - 53315478
Alignment:
Q  97 tatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctc 196  Q
    |||||||||||| |||||||||||||||||| ||| ||||| ||||||  |||||||||    || |||||||    ||||||| | | | |||||||||    
T  53315360 tatgaaaataagttaaaaatagcttatggacatgtgatatg-ttgttttcataagctctcacaaatagtcttatatgtgcttataccagtggataagctc 53315458  T
Q  197 aaataaaacaatccaaacag 216  Q
    ||||||  ||||||||||||    
T  53315459 aaataagtcaatccaaacag 53315478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Original strand, 3175915 - 3175973
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||  ||||||||| ||||||  |||| | |||||||||||||||||||||    
T  3175915 aaagataaaataaagtcaaattgttttcaagtaagttataagctgttttcataagctat 3175973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 29778776 - 29778842
Alignment:
Q  44 aaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagct 110  Q
    ||||| |||||||||||||| |||| |||||||||||||||  ||| | | | ||||||||||||||    
T  29778776 aaattgttttcatataagctgtaagttgttttcataagctaccttgaagagcttatgaaaataagct 29778842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 30338723 - 30338597
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctg-ttttcataagctattttggataacatatg 100  Q
    ||||||||||  | ||||| |||| ||||||| |||  ||| ||| | |||||||||||||| ||| ||| |||||||||||| | ||||| |   ||||    
T  30338723 ttatgtataaactatttctataacaaaagatagaataaagttaaactgttttcatataagctataaactgtttttcataagctctcttggagagtttatg 30338624  T
Q  101 aaaataagctaaaaatagcttatggac 127  Q
    |||||||||  |||| |||||||||||    
T  30338623 aaaataagcataaaacagcttatggac 30338597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 108
Target Start/End: Complemental strand, 35571714 - 35571656
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataag 108  Q
    ||||| |||||||| ||||||||||||||||||||| || || ||| | ||||||||||    
T  35571714 ttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataag 35571656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 80
Target Start/End: Complemental strand, 45128441 - 45128363
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataa 80  Q
    ||||||||||  | ||||| |||| |||||||||||| | ||||||| || ||||||||||| |||  |||||||||||    
T  45128441 ttatgtataaactatttctataacaaaagataaaatcaaatcaaattattctcatataagctataaattgttttcataa 45128363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 54325143 - 54325085
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||  ||||||| | |||||||||||||| |||||| |||||| |||||||    
T  54325143 aaagataaaataaagtcaaactgttttcatataagctataagctattttcaaaagctat 54325085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 10172172 - 10172213
Alignment:
Q  174 tgcttatgctaatagataagctcaaataaaacaatccaaaca 215  Q
    |||||||||  ||||||||||||||||||| |||||||||||    
T  10172172 tgcttatgcatatagataagctcaaataaatcaatccaaaca 10172213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 81
Target Start/End: Original strand, 24091440 - 24091481
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcataag 81  Q
    ||||||||| |||||||||||||| ||| |||||||||||||    
T  24091440 agtcaaattattttcatataagctataaactgttttcataag 24091481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 2 - 63
Target Start/End: Original strand, 30024639 - 30024700
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagct 63  Q
    ||||| ||||||| ||||| |||| |||||||||||  ||| ||||| ||||||||||||||    
T  30024639 ttatgcataagttatttctataacaaaagataaaataaagtaaaattgttttcatataagct 30024700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 32421087 - 32421148
Alignment:
Q  45 aattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 106  Q
    |||| ||| |||||||||| ||||| |||| |||||||||||||| | ||| ||||||||||    
T  32421087 aattgtttacatataagctataagcagtttccataagctattttgaagaacttatgaaaata 32421148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 264
Target Start/End: Complemental strand, 34430655 - 34430626
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtca 264  Q
    ||||||||||||||||||||||||||||||    
T  34430655 ttatgctagtaaataagctcaaataagtca 34430626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 123
Target Start/End: Original strand, 36048520 - 36048593
Alignment:
Q  50 ttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttat 123  Q
    |||||||||||||| |||||| |||||| ||||||| || || | | |||| ||||||||| | ||||||||||    
T  36048520 ttttcatataagctataagctattttcaaaagctatcttagagagcttatggaaataagctgacaatagcttat 36048593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 52315265 - 52315220
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagct 110  Q
    |||| ||||| |||||||||||||||| ||| ||||||||||||||    
T  52315265 taagttgtttccataagctattttggaaaacttatgaaaataagct 52315220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 54327576 - 54327519
Alignment:
Q  6 gtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagct 63  Q
    ||||||||||||||| |||| ||||||||||   ||||||| | ||||||||||||||    
T  54327576 gtataagttgtttctataacaaaagataaaacaaagtcaaactgttttcatataagct 54327519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 3155543 - 3155655
Alignment:
Q  3 tatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaa 102  Q
    |||||||||| | ||||| || | |||||||||||  ||| ||||| ||||  || |||||  ||||||||||||||| |||| ||| | |||  |||||    
T  3155543 tatgtataagctatttctatagcaaaagataaaataaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaa 3155642  T
Q  103 aataagctaaaaa 115  Q
    |||||||| ||||    
T  3155643 aataagctgaaaa 3155655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 177 - 213
Target Start/End: Complemental strand, 3637335 - 3637299
Alignment:
Q  177 ttatgctaatagataagctcaaataaaacaatccaaa 213  Q
    ||||||||||||||||||||||||||  |||||||||    
T  3637335 ttatgctaatagataagctcaaataagtcaatccaaa 3637299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 9760404 - 9760484
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataa 107  Q
    |||||||||||  ||| ||||||||||   ||| ||| |||| |||||| ||||||||| ||||| ||| |||||||||||    
T  9760404 aaagataaaataaagttaaattcttttttaatatgctataagttgtttttataagctatattggagaacttatgaaaataa 9760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 28 - 84
Target Start/End: Complemental strand, 13949949 - 13949893
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    ||||||||||  ||||||||| |||||||||||||| |||| |||||  ||||||||    
T  13949949 aagataaaataaagtcaaattgttttcatataagctataagttgtttgtataagcta 13949893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 17884021 - 17884129
Alignment:
Q  16 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||| |||| |||||||||||  ||| ||||| ||||  |||||| | | || |||||||||||||||| ||||| | | ||||||||| |||| ||||    
T  17884021 tttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaattagctgaaaa 17884120  T
Q  116 tagcttatg 124  Q
     | ||||||    
T  17884121 caacttatg 17884129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 23819028 - 23819111
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||||| ||||  |||| ||| |||||||  ||||||| | |||||||||||| | |||  ||||||||||||||||    
T  23819028 tttatgtataagttatttccataac-aaatataaaatgtagtcaaactgttttcatataagttataacatgttttcataagctat 23819111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 30581783 - 30581719
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttgga 91  Q
    |||||||||||  ||||||| | ||||| |||||||| ||||||||||| ||||| ||| |||||    
T  30581783 aaagataaaatgaagtcaaactattttcgtataagctataagctgttttaataagttatcttgga 30581719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 35571589 - 35571549
Alignment:
Q  176 cttatgctaatagataagctcaaataaaacaatccaaacag 216  Q
    ||||||||| |||||||||||||||||  ||||||||||||    
T  35571589 cttatgctagtagataagctcaaataagccaatccaaacag 35571549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 47119071 - 47118983
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||||||||   ||| ||||| |||||||||||||| |||| ||| |||||| ||||| ||| | ||| |||||| ||||||| ||||    
T  47119071 aaagataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagctgaaaa 47118983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 108
Target Start/End: Original strand, 49202638 - 49202690
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataag 108  Q
    |||||||| |||| ||||||| |||||||| |||||||||  |||||||||||    
T  49202638 tataagctataagttgttttcgtaagctatcttggataactaatgaaaataag 49202690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 4246354 - 4246474
Alignment:
Q  7 tataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaata 106  Q
    |||||||||||||| |||  ||||||||| |  |||||   | ||||||||||| || |||||||||||||||||||||| |||| | ||||| ||||||    
T  4246354 tataagttgtttctataataaaagataaattgaagtcagtatgttttcatataatctataagctgttttcataagctattatggagagcatataaaaata 4246453  T
Q  107 agctaaaaatagcttatggac 127  Q
    || | |||| |||||||||||    
T  4246454 agttgaaaacagcttatggac 4246474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 24476541 - 24476663
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||| | ||||| || | |||||||||||  ||| ||||| |||||||||||||  ||||| ||||| ||||||||||||||| |||  ||      
T  24476541 ttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataagcgataagcagttttgataagctattttggagaacggattg 24476640  T
Q  102 aaataagctaaaaatagcttatg 124  Q
    ||||||| | |||||||||||||    
T  24476641 aaataagttgaaaatagcttatg 24476663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 7148606 - 7148817
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||| | |||||  ||||||||||||||   | || || ||||| |||||||||| |||| | |||| ||||||||   |||| | | |||||    
T  7148606 ttatgtataagctatttctacaactaaagataaaaaaaa-tccaactctttacatataagctataaggtattttaataagctaccctggagagcttatga 7148704  T
Q  102 aaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaata 201  Q
    ||||||| | ||||||||||||||||  || ||| ||| |||||  |||||||| | ||||| ||| || | ||||||||| | ||||||||||||||||    
T  7148705 aaataagttgaaaatagcttatggacaagtcataagtt-gtttccgtaagctctgctgaacactctcacaagtgcttatgcgactagataagctcaaata 7148803  T
Q  202 aaacaatccaaaca 215  Q
    |  ||| |||||||    
T  7148804 agtcaaaccaaaca 7148817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 86
Target Start/End: Complemental strand, 29274360 - 29274276
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    ||||||||||| | ||||| || | |||||||||||  ||||||||| |||||||||||||| ||| ||||||||||||| ||||    
T  29274360 ttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttcataagatatt 29274276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 65 - 216
Target Start/End: Original strand, 8010359 - 8010509
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacag 164  Q
    ||||||||||| ||||| |||  |||| ||| |||  |||||| || ||||||||||||| || ||| ||  ||| ||||||||||||||| | | || |    
T  8010359 taagctgttttaataagttatcctggagaacttatagaaataaactgaaaatagcttatgaacatgtcatgagtt-gtttctataagctctcctggactg 8010457  T
Q  165 tcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacag 216  Q
    ||| || |||| |||||| |||||||||||||| ||||  ||||||||||||    
T  8010458 tctcacaaatgtttatgccaatagataagctcacataagtcaatccaaacag 8010509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 4006653 - 4006778
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||| ||||| | ||||| |||| || ||||||||  ||||||||| |||| ||||||||| |||| ||||||||||||||||    || |   |||||    
T  4006653 ttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgagaggttatga 4006752  T
Q  102 aaataagctaaaaatagcttatggac 127  Q
    ||||||||| |||||| |||||||||    
T  4006753 aaataagctgaaaataacttatggac 4006778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 9093687 - 9093574
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||| ||||| | ||||| || | |||||||||||  ||| ||||| ||||| |||||||| ||||||||||||||||||| | || || ||| || ||    
T  9093687 ttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaaga 9093588  T
Q  102 aaataagctaaaaa 115  Q
    ||||||||| ||||    
T  9093587 aaataagctgaaaa 9093574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 24782012 - 24782129
Alignment:
Q  16 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||| |||| |||||||||||| | ||||||| |||||||||||| | ||||||  ||| |||| ||||  | || | | ||||||||||| |||||||    
T  24782012 tttctataacaaaagataaaatcaaatcaaattgttttcatataagttataagctactttaataaactatccttgagagcttatgaaaataaactaaaaa 24782111  T
Q  116 tagcttatggacgtgtta 133  Q
    ||||||||| ||| ||||    
T  24782112 tagcttatgaacgagtta 24782129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 85
Target Start/End: Complemental strand, 281959 - 281896
Alignment:
Q  22 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||| |||||||||||  |||||| || |||||||||||||| |||||||| ||||||||||||    
T  281959 taacaaaagataaaataaagtcaacttgttttcatataagctataagctgtgttcataagctat 281896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 124
Target Start/End: Original strand, 2735028 - 2735130
Alignment:
Q  22 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 121  Q
    |||| |||||||||||  ||| ||||| ||||  ||||| || |||||||||||||||||| || ||| | ||| |||||||||||||  |||| |||||    
T  2735028 taacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagctt 2735127  T
Q  122 atg 124  Q
    |||    
T  2735128 atg 2735130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 279
Target Start/End: Original strand, 29249513 - 29249550
Alignment:
Q  242 agtaaataagctcaaataagtcaatctaaacatgccct 279  Q
    |||||||||||||||||||||||||| |||||||||||    
T  29249513 agtaaataagctcaaataagtcaatccaaacatgccct 29249550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 31461756 - 31461829
Alignment:
Q  148 taagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaataaaacaatccaaacaggctta 221  Q
    |||||||||  ||||||||| || | | ||||||| |||||||||||||||||||| | || ||||||||||||    
T  31461756 taagctcttgcgaacagtctcacaagtacttatgcaaatagataagctcaaataaaccgatgcaaacaggctta 31461829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 31671180 - 31671092
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||||||||   ||| ||||| |||||||||||||| |||||||||||| ||| ||||  | |||| | |||||||||||||| ||||    
T  31671180 aaagataaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaataagctgaaaa 31671092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 32975916 - 32976000
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||||||||||||| |||||||||| ||| |||||||  ||||||| | |||  ||| ||||  |||| ||||||||||||||||    
T  32975916 tttatgtataagttatttctgtaacaaaatataaaataaagtcaaactgtttcaatagaagcaataagttgttttcataagctat 32976000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 219
Target Start/End: Original strand, 103542 - 103585
Alignment:
Q  176 cttatgctaatagataagctcaaataaaacaatccaaacaggct 219  Q
    |||||||||||| ||||||||||||||  |||||||||||||||    
T  103542 cttatgctaatatataagctcaaataagtcaatccaaacaggct 103585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 5550109 - 5550148
Alignment:
Q  40 agtcaaattcttttcatataagctctaagctgttttcata 79  Q
    ||||||||| |||||||||||||| |||||||||||||||    
T  5550109 agtcaaattgttttcatataagctataagctgttttcata 5550148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 24836331 - 24836272
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataa 60  Q
    |||||||||||||| ||||| |||| |||||||||||  ||||||||| ||||| |||||    
T  24836331 tttatgtataagttatttctataacaaaagataaaataaagtcaaattgttttcgtataa 24836272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 34430529 - 34430470
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||| |||||||||||||||| ||||| ||  |||||||||||||| |||| ||||||||    
T  34430529 taaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatg 34430470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 65 - 115
Target Start/End: Complemental strand, 835317 - 835267
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    ||||| ||||||||||||||| ||||| ||| |||||||||||||| ||||    
T  835317 taagcagttttcataagctatcttggagaacttatgaaaataagctgaaaa 835267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 22 - 84
Target Start/End: Complemental strand, 2027517 - 2027455
Alignment:
Q  22 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagcta 84  Q
    |||| |||||||||||  ||||||| | ||||||||||| || ||||||||| ||||||||||    
T  2027517 taacaaaagataaaataaagtcaaactattttcatataacctataagctgttctcataagcta 2027455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 72 - 202
Target Start/End: Original strand, 2455819 - 2455948
Alignment:
Q  72 ttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttacc 171  Q
    |||||||||||||| ||||| | | |||| ||||||| | ||||||| |||||| | ||| ||| | ||||||| |||||||||||  |||| |||  |     
T  2455819 ttttcataagctatcttggagagcttatggaaataagttgaaaatagtttatgggcatgtcataag-ttgtttccataagctcttctaaacaatctcgca 2455917  T
Q  172 aatgcttatgctaatagataagctcaaataa 202  Q
    | |||||||||   |||||||||||||||||    
T  2455918 agtgcttatgccggtagataagctcaaataa 2455948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 156
Target Start/End: Original strand, 4420609 - 4420735
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatgga 126  Q
    |||||||||||  ||||||| | ||||  ||||||||  ||| | ||||| |||||||| ||||| | | |||| ||||||||| |||| |||||||| |    
T  4420609 aaagataaaataaagtcaaactatttttgtataagct--aagttattttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaa 4420706  T
Q  127 cgtgttatatgtttgtttctataagctctt 156  Q
    | ||| |||  |||||||||||||||||||    
T  4420707 catgtcataa-tttgtttctataagctctt 4420735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 8420328 - 8420115
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||| ||||| ||||| |||  || ||||||||  ||||||| | | || ||||||  | ||||||||| || ||||||||  |||| | | ||||     
T  8420328 ttatgtacaagttatttctttaataaatgataaaataaagtcaaactgtgtttatataaaatataagctgttctcgtaagctataatggagagcttatgg 8420229  T
Q  102 aaataagctaaaaatagcttatggacgtgttatatgtttgtttctataagctcttcggaacagtcttaccaatgcttatgctaatagataagctcaaata 201  Q
    ||||||| | |||||||||| ||||| ||| ||| | |  ||||||||||||||    |||||||| || | || |||||  ||||||||||||||||||    
T  8420228 aaataagttgaaaatagcttgtggacatgtcataagcta-tttctataagctctcactaacagtctcacaagtgtttatgtcaatagataagctcaaata 8420130  T
Q  202 aa-acaatccaaaca 215  Q
    ||  |||||||||||    
T  8420129 aagtcaatccaaaca 8420115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 26 - 92
Target Start/End: Original strand, 9604812 - 9604878
Alignment:
Q  26 taaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggat 92  Q
    |||||||| |||  ||| ||||| ||||  |||||||| ||||||||||||||||| ||||||||||    
T  9604812 taaagatataataaagtaaaattatttttgtataagctataagctgttttcataagttattttggat 9604878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 14492266 - 14492320
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataag 81  Q
    |||||||||||  ||||||||| |||| ||| ||||| |||||||||||||||||    
T  14492266 aaagataaaatgaagtcaaattgttttgatacaagctataagctgttttcataag 14492320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 27615377 - 27615335
Alignment:
Q  29 agataaaatcgagtcaaattcttttcatataagctctaagctg 71  Q
    |||||||||  |||||||||||||||||||||||| |||||||    
T  27615377 agataaaataaagtcaaattcttttcatataagctgtaagctg 27615335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 27693544 - 27693494
Alignment:
Q  28 aagataaaatcgagtcaaattcttttcatataagctctaagctgttttcat 78  Q
    ||||||||||  ||||||||| |||||||||||||| ||||||| ||||||    
T  27693544 aagataaaataaagtcaaattattttcatataagctgtaagctgatttcat 27693494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 124
Target Start/End: Original strand, 31624085 - 31624151
Alignment:
Q  58 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||| ||||||||||||||| ||||| ||||| ||  |||||||||||| | |||| ||||||||    
T  31624085 taagctataagctgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatg 31624151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 33787877 - 33787787
Alignment:
Q  1 tttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttgga 91  Q
    |||||||||||  | ||||| |||| ||| ||||||   |||||||||  ||||||||||| | ||||||||||||||||| ||| |||||    
T  33787877 tttatgtataaactatttctataacaaaatataaaacaaagtcaaattgatttcatataagttataagctgttttcataagttatcttgga 33787787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 116
Target Start/End: Complemental strand, 837322 - 837233
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaat 116  Q
    ||||||||||  |||| ||||| ||||  | |||||| ||||  |||||||| |||||| ||||| ||| |||||||||||||| |||||    
T  837322 aaagataaaacagagttaaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaat 837233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 1402949 - 1403018
Alignment:
Q  16 tttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctat 85  Q
    ||||| |||| |||||||||||  ||| ||| | |||||||||||||| |||  ||||||||||||||||    
T  1402949 tttctataacaaaagataaaataaagttaaactattttcatataagctataaattgttttcataagctat 1403018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 115
Target Start/End: Complemental strand, 7785848 - 7785762
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaa 115  Q
    |||||||||||  ||||||| |||||||||||||||| |||  ||| |||||  ||||||||||| | | |||| ||||||||| ||||    
T  7785848 aaagataaaataaagtcaaactcttttcatataagctataaattgtcttcat--gctattttggagagcttatggaaataagctgaaaa 7785762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 9668096 - 9667991
Alignment:
Q  22 taactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctt 121  Q
    |||| |||||||| || ||||| |||| ||||||||||||||  ||  ||||||||||| || ||| ||| | | |||| ||||||| | |||| |||||    
T  9668096 taacaaaagataacatagagtcgaattgttttcatataagctacaatttgttttcataaactgtttcggagagcttatggaaataagttgaaaacagctt 9667997  T
Q  122 atggac 127  Q
    ||||||    
T  9667996 atggac 9667991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 135
Target Start/End: Complemental strand, 27924634 - 27924601
Alignment:
Q  102 aaataagctaaaaatagcttatggacgtgttata 135  Q
    |||||||||||||||| |||||||||||||||||    
T  27924634 aaataagctaaaaataacttatggacgtgttata 27924601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 28641824 - 28641747
Alignment:
Q  58 taagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatggacgtgttata 135  Q
    |||||| ||| |||||||||  ||||||| || | | | ||||||||||||||||||| |||||||| || |||||||    
T  28641824 taagctataaactgttttcaatagctattctgcagagcttatgaaaataagctaaaaacagcttatgaacatgttata 28641747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 835219 - 835179
Alignment:
Q  176 cttatgctaatagataagctcaaataaaacaatccaaacag 216  Q
    ||||||||| |||||||||||||||||  ||||||||||||    
T  835219 cttatgctagtagataagctcaaataaggcaatccaaacag 835179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 124
Target Start/End: Complemental strand, 3202024 - 3201956
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    ||||| || |||||| | |||||||||||| ||||||||||||||  |||||||| |||| | ||||||    
T  3202024 tataaactataagctatgttcataagctatcttggataacatatgggaataagctgaaaacaacttatg 3201956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 5977042 - 5977078
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatctaaa 271  Q
    ||||||||||| |||||||| ||||||||||||||||    
T  5977042 ttatgctagtagataagctcgaataagtcaatctaaa 5977078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 108
Target Start/End: Complemental strand, 9109328 - 9109276
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataag 108  Q
    |||||||| |||||||||||||| | ||| |||||| ||| ||||||||||||    
T  9109328 tataagctataagctgttttcattaactaatttggagaacctatgaaaataag 9109276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 122
Target Start/End: Complemental strand, 9559672 - 9559553
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttggataacatatga 101  Q
    ||||||||||||| ||||| || | |||||||||||  | | ||||| ||||| || || ||  || ||||||||| ||||||| ||| ||||| |||||    
T  9559672 ttatgtataagttatttctatagcaaaagataaaataaatttaaattgttttcgtagaaactacaaactgttttca-aagctatcttgaataacttatga 9559574  T
Q  102 aaataagctaaaaatagctta 122  Q
    ||||||| | |||| ||||||    
T  9559573 aaataagttgaaaacagctta 9559553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 12111077 - 12111121
Alignment:
Q  174 tgcttatgctaatagataagctcaaataaaacaatccaaacaggc 218  Q
    ||||||||||| |||||||||||||||||  ||||||||| ||||    
T  12111077 tgcttatgctagtagataagctcaaataagtcaatccaaataggc 12111121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 12111080 - 12111112
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatc 267  Q
    ||||||||||| |||||||||||||||||||||    
T  12111080 ttatgctagtagataagctcaaataagtcaatc 12111112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 85
Target Start/End: Complemental strand, 24838831 - 24838791
Alignment:
Q  45 aattcttttcatataagctctaagctgttttcataagctat 85  Q
    |||| |||||||||||||| ||||||| |||||||||||||    
T  24838831 aattattttcatataagctataagctgatttcataagctat 24838791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 120
Target Start/End: Original strand, 24982698 - 24982762
Alignment:
Q  56 tataagctctaagctgttttcataagctattttggataacatatgaaaataagctaaaaatagct 120  Q
    |||| ||| ||||||||||||||||| ||||||||| ||| |||||   ||||||||||| ||||    
T  24982698 tatatgctataagctgttttcataagttattttggagaacttatgagggtaagctaaaaaaagct 24982762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 63
Target Start/End: Original strand, 27713471 - 27713507
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagct 63  Q
    |||||||||||  ||||||||||||||||||||||||    
T  27713471 aaagataaaataaagtcaaattcttttcatataagct 27713507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 235 - 267
Target Start/End: Original strand, 31338090 - 31338122
Alignment:
Q  235 ttatgctagtaaataagctcaaataagtcaatc 267  Q
    ||||||||||| |||||||||||||||||||||    
T  31338090 ttatgctagtagataagctcaaataagtcaatc 31338122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 76 - 124
Target Start/End: Original strand, 31813174 - 31813222
Alignment:
Q  76 cataagctattttggataacatatgaaaataagctaaaaatagcttatg 124  Q
    |||||||||| ||||| |||||||||||||||||| ||||  |||||||    
T  31813174 cataagctatcttggagaacatatgaaaataagctgaaaacggcttatg 31813222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 27515 - 27603
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctattttgg 90  Q
    ||||||||||||| ||||| ||||  ||||||||||  ||||||||| ||||||||||| || |||| ||||||||||| |||| ||||    
T  27515 ttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatcttgg 27603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 21353 - 21304
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaa 114  Q
    ||||||||||||||||||||| ||||| ||  ||||||||||| ||||||    
T  21353 taagctgttttcataagctatattggagaaattatgaaaataaactaaaa 21304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 22233 - 22290
Alignment:
Q  65 taagctgttttcataagctattttggataacatatgaaaataagctaaaaatagctta 122  Q
    ||||||||| ||||||||||| ||||| ||| |||||||||||||| |||| ||||||    
T  22233 taagctgttatcataagctatgttggaaaacttatgaaaataagctgaaaaaagctta 22290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 18473 - 18437
Alignment:
Q  27 aaagataaaatcgagtcaaattcttttcatataagct 63  Q
    |||||||||||  ||||||||||||||||||||||||    
T  18473 aaagataaaataaagtcaaattcttttcatataagct 18437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 86
Target Start/End: Original strand, 42556 - 42639
Alignment:
Q  2 ttatgtataagttgtttctgtaactaaagataaaatcgagtcaaattcttttcatataagctctaagctgttttcataagctatt 86  Q
    ||||||||||||  ||||| |||| ||||||||||| |||| |||    ||||||||||||| | || |||||||||||||||||    
T  42556 ttatgtataagtcatttctataacaaaagataaaatagagt-aaacctgtttcatataagctattagttgttttcataagctatt 42639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University

This website was viewed 1353 times since January 2019
Visitors: 6140