View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0857_low_3 (Length: 636)

Name: NF0857_low_3
Description: NF0857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0857_low_3
NF0857_low_3
[»] chr6 (7 HSPs)
chr6 (13-480)||(4324452-4324919)
chr6 (374-481)||(31583644-31583751)
chr6 (395-456)||(2205613-2205674)
chr6 (416-460)||(316830-316874)
chr6 (395-431)||(5731556-5731592)
chr6 (416-480)||(27894053-27894117)
chr6 (420-480)||(34939755-34939815)
[»] chr8 (11 HSPs)
chr8 (395-480)||(20672736-20672821)
chr8 (375-456)||(36643916-36643997)
chr8 (396-480)||(33553227-33553311)
chr8 (415-474)||(30013224-30013283)
chr8 (418-464)||(10075566-10075612)
chr8 (320-369)||(6950223-6950272)
chr8 (375-480)||(14949832-14949937)
chr8 (376-425)||(33209296-33209345)
chr8 (399-460)||(35220742-35220803)
chr8 (316-425)||(4558681-4558792)
chr8 (316-368)||(43208268-43208320)
[»] chr5 (14 HSPs)
chr5 (395-468)||(29116961-29117036)
chr5 (415-480)||(25720416-25720481)
chr5 (397-480)||(36774706-36774789)
chr5 (316-480)||(41052773-41052939)
chr5 (415-460)||(39105470-39105515)
chr5 (316-352)||(6725120-6725156)
chr5 (412-456)||(7319031-7319075)
chr5 (316-368)||(28981889-28981941)
chr5 (416-478)||(15074750-15074812)
chr5 (415-456)||(4014447-4014488)
chr5 (412-481)||(4619710-4619779)
chr5 (416-477)||(40205076-40205137)
chr5 (415-480)||(41957450-41957515)
chr5 (316-417)||(6739755-6739858)
[»] chr2 (16 HSPs)
chr2 (311-456)||(32098353-32098503)
chr2 (375-431)||(7282962-7283018)
chr2 (329-425)||(42817452-42817550)
chr2 (414-468)||(3611231-3611285)
chr2 (413-480)||(1939331-1939398)
chr2 (418-477)||(42131626-42131685)
chr2 (422-464)||(4606938-4606980)
chr2 (412-454)||(9556242-9556284)
chr2 (415-477)||(22681187-22681249)
chr2 (419-456)||(750680-750717)
chr2 (407-480)||(43456706-43456779)
chr2 (412-452)||(8017437-8017477)
chr2 (397-445)||(15203475-15203523)
chr2 (412-456)||(33319835-33319879)
chr2 (412-480)||(36852475-36852543)
chr2 (420-460)||(43570425-43570465)
[»] chr3 (14 HSPs)
chr3 (375-456)||(44284103-44284184)
chr3 (415-461)||(44747426-44747472)
chr3 (412-456)||(2719471-2719515)
chr3 (377-460)||(22667371-22667455)
chr3 (377-460)||(22724010-22724094)
chr3 (416-480)||(24624217-24624281)
chr3 (412-480)||(34254807-34254875)
chr3 (412-480)||(37273137-37273205)
chr3 (319-425)||(38462167-38462275)
chr3 (310-355)||(51130613-51130658)
chr3 (412-460)||(20170727-20170775)
chr3 (416-456)||(21367674-21367714)
chr3 (416-460)||(24785212-24785256)
chr3 (416-456)||(49465688-49465728)
[»] chr7 (13 HSPs)
chr7 (316-425)||(27481370-27481481)
chr7 (395-456)||(7244666-7244727)
chr7 (316-370)||(753337-753391)
chr7 (415-477)||(38010720-38010782)
chr7 (415-480)||(12110366-12110431)
chr7 (415-456)||(15321807-15321848)
chr7 (415-456)||(18749840-18749881)
chr7 (412-453)||(36060001-36060042)
chr7 (415-456)||(40689009-40689050)
chr7 (407-480)||(45078276-45078349)
chr7 (316-352)||(504115-504151)
chr7 (418-454)||(5276240-5276276)
chr7 (375-451)||(35808954-35809030)
[»] chr4 (11 HSPs)
chr4 (375-479)||(47970262-47970366)
chr4 (375-453)||(51044506-51044585)
chr4 (375-456)||(4191683-4191765)
chr4 (416-460)||(17822884-17822928)
chr4 (416-479)||(4798566-4798629)
chr4 (415-460)||(16200000-16200045)
chr4 (411-460)||(55547063-55547112)
chr4 (416-480)||(11264308-11264372)
chr4 (317-353)||(31059536-31059572)
chr4 (416-480)||(42866075-42866139)
chr4 (412-456)||(53673681-53673725)
[»] scaffold0590 (1 HSPs)
scaffold0590 (318-425)||(1150-1259)
[»] scaffold0275 (1 HSPs)
scaffold0275 (318-425)||(2716-2825)
[»] chr1 (16 HSPs)
chr1 (314-368)||(24263274-24263328)
chr1 (375-480)||(46499873-46499980)
chr1 (375-458)||(38651452-38651535)
chr1 (415-481)||(6231814-6231880)
chr1 (415-477)||(28262621-28262683)
chr1 (415-456)||(7137021-7137062)
chr1 (398-460)||(15709834-15709898)
chr1 (415-480)||(27140484-27140549)
chr1 (416-456)||(8130443-8130483)
chr1 (412-480)||(11639415-11639483)
chr1 (416-456)||(12564522-12564562)
chr1 (395-435)||(23373356-23373396)
chr1 (412-460)||(23544658-23544706)
chr1 (407-439)||(26293168-26293200)
chr1 (375-431)||(28077117-28077173)
chr1 (412-460)||(38867850-38867898)


Alignment Details
Target: chr6 (Bit Score: 456; Significance: 0; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 456; E-Value: 0
Query Start/End: Original strand, 13 - 480
Target Start/End: Complemental strand, 4324919 - 4324452
Alignment:
Q  13 aatatcaatcattaaacgagccctaacctttttgcaggtttcttttgttgtcaattacaggttcatcaggcacctcttttcccttgctaagaatctttac 112  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4324919 aatatcaatcactaaacgagccctaacctttttgcaggtttcttttgttgtcaattacaggttcatcaggcacctcttttcccttgctaagaatctttac 4324820  T
Q  113 agccaaaccattttttgcagatgctaaaagggattctttgttaatacacacgggtggctgttttggtacaagaataacagcatctgtcaccaataatgtc 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4324819 agccaaaccattttttgcagatgctaaaagggattctttgttaatacacacgggtggctgtttcggtacaagaataacagcatctgtcaccaataatgtc 4324720  T
Q  213 cttgaaggcttgtggtagaaagcaacctccacatatggcccaattcctaaagaaataagcaaatgagacttttcattctttacttacaaagattaaagct 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4324719 cttgaaggcttgtggtagaaagcaacctccacatatggcccaattcctaaagaaataagcaaatgagacttttcattctttacttacaaagattaaagct 4324620  T
Q  313 ctatttggataaataatttaattaagtgcttttagcataaacgttaatcatataagcgtatttataagctagttttataatgaaagataaaaagaagtca 412  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4324619 ctatttggataaacaatttaattaagtgcttttagcataaacgttaatcatataagcgtatttataagctagttttataatgaaagataaaaagaagtca 4324520  T
Q  413 aactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4324519 aactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 4324452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 481
Target Start/End: Original strand, 31583644 - 31583751
Alignment:
Q  374 ttataagctagttttataatgaaagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggac 473  Q
    |||||||||| || |||||  | |||||||| ||||||||| |||||||||||||||||| | ||| |||||| ||||||| | ||| ||  ||| ||||    
T  31583644 ttataagctatttctataacaagagataaaatgaagtcaaattgttttcataagctatcccgaaaagcttatggaaataagttgaaaacaacttatggac 31583743  T
Q  474 atgtcatt 481  Q
    ||||||||    
T  31583744 atgtcatt 31583751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 456
Target Start/End: Complemental strand, 2205674 - 2205613
Alignment:
Q  395 aaagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||  |||||||| ||||||||||||||||| |||| | |||||| |||||||||    
T  2205674 aaagataaaacaaagtcaaattgttttcataagctatcttggagagcttatggaaataagct 2205613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 460
Target Start/End: Complemental strand, 316874 - 316830
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    |||||||||||| |||||| |||| ||| ||||||||||||||||    
T  316874 tgttttcataagttatccttgaaatcttctgcaaataagctaaaa 316830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 431
Target Start/End: Original strand, 5731556 - 5731592
Alignment:
Q  395 aaagataaaaagaagtcaaactgttttcataagctat 431  Q
    |||||||||| ||||||||| ||||||||||||||||    
T  5731556 aaagataaaatgaagtcaaattgttttcataagctat 5731592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 27894053 - 27894117
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    |||||||||||| |||| || ||| |||||| ||||||||| ||| ||||||| |||||| ||||    
T  27894053 tgttttcataagatatcttgaaaagcttatgaaaataagctgaaaacagtttatggacatatcat 27894117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 34939755 - 34939815
Alignment:
Q  420 ttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    |||||||||||||||||| |  ||||| ||||||||| ||| || |||| |||||||||||    
T  34939755 ttcataagctatcctggagagtttatggaaataagctgaaaacaatttatggacatgtcat 34939815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 20672736 - 20672821
Alignment:
Q  395 aaagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||||||  ||||||||||||||| ||||||||||||||| | |||||| ||||||||| ||| ||| ||| | |||||||||    
T  20672736 aaagataaaataaagtcaaactgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcat 20672821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 456
Target Start/End: Complemental strand, 36643997 - 36643916
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||| || |||||| ||||||| |   |||||||||| ||||||||||||||| |||| ||| |||| |||||||||    
T  36643997 tataagctatttctataataaaagatacagtaaagtcaaactattttcataagctatcatggagaacgtatggaaataagct 36643916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 396 - 480
Target Start/End: Original strand, 33553227 - 33553311
Alignment:
Q  396 aagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    |||||||||  |||||||| ||||||||||||||||| || | | |||||| |||||||||   | ||| |||||||||||||||    
T  33553227 aagataaaataaagtcaaattgttttcataagctatcttgaagagcttatggaaataagctgggaacagcttagggacatgtcat 33553311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 474
Target Start/End: Original strand, 30013224 - 30013283
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggaca 474  Q
    ||||||||||||||||||||| | |||| ||| ||||||||| |||  ||||||||||||    
T  30013224 ctgttttcataagctatcctgtagaactaatggaaataagctgaaaatagtttagggaca 30013283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 418 - 464
Target Start/End: Complemental strand, 10075612 - 10075566
Alignment:
Q  418 ttttcataagctatcctggaaaacttatgcaaataagctaaaagcag 464  Q
    ||||||||||||||||| || | |||||| |||||||||||||||||    
T  10075612 ttttcataagctatcctagagagcttatgaaaataagctaaaagcag 10075566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 369
Target Start/End: Original strand, 6950223 - 6950272
Alignment:
Q  320 gataaataatttaattaagtgcttttagcataaacgttaatcatataagc 369  Q
    |||||| || |||||||||||||| ||||||||||| | |||||||||||    
T  6950223 gataaacaacttaattaagtgcttatagcataaacgcttatcatataagc 6950272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 480
Target Start/End: Original strand, 14949832 - 14949937
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggaca 474  Q
    ||||||||| || |||||  ||||||||||   ||||||||| |||||||||||||||||  | |  ||||  ||||||||| ||| ||| ||| |||||    
T  14949832 tataagctacttctataacaaaagataaaatagagtcaaactcttttcataagctatcctaaagagattatagaaataagctgaaaacagcttatggaca 14949931  T
Q  475 tgtcat 480  Q
    ||||||    
T  14949932 tgtcat 14949937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 425
Target Start/End: Complemental strand, 33209345 - 33209296
Alignment:
Q  376 ataagctagttttataatgaaagataaaaagaagtcaaactgttttcata 425  Q
    |||||||| || |||||||||||||||||  ||||| |||||||||||||    
T  33209345 ataagctatttctataatgaaagataaaataaagtcgaactgttttcata 33209296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 460
Target Start/End: Complemental strand, 35220803 - 35220742
Alignment:
Q  399 ataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    |||||| || || |||||||||||||||||||| ||||| | |||||  |||||||||||||    
T  35220803 ataaaatgatgttaaactgttttcataagctattctggagagcttataaaaataagctaaaa 35220742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 316 - 425
Target Start/End: Original strand, 4558681 - 4558792
Alignment:
Q  316 tttggataaataatttaattaagtgcttttagcataaacgttaatcatataagcg--tatttataagctagttttataatgaaagataaaaagaagtcaa 413  Q
    |||||||||| || ||||||| | |||| ||||||||||||| || || |||| |  ||| ||||||||| || |||||| ||||||||||  |||| ||    
T  4558681 tttggataaacaacttaattacgcgcttatagcataaacgtttattatgtaagtgtttatgtataagctatttctataataaaagataaaataaagttaa 4558780  T
Q  414 actgttttcata 425  Q
    | | ||||||||    
T  4558781 attattttcata 4558792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 43208320 - 43208268
Alignment:
Q  316 tttggataaataatttaattaagtgcttttagcataaacgttaatcatataag 368  Q
    |||| ||||| || |||||||||||||| ||| ||||||||| ||||||||||    
T  43208320 tttgtataaacaacttaattaagtgcttatagtataaacgttcatcatataag 43208268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 395 - 468
Target Start/End: Complemental strand, 29117036 - 29116961
Alignment:
Q  395 aaagataaaaagaagtcaaactgttttc--ataagctatcctggaaaacttatgcaaataagctaaaagcagttta 468  Q
    ||||||||||  ||||||||||||||||  ||||||||||||| ||| |||||||||||||||| ||| |||||||    
T  29117036 aaagataaaataaagtcaaactgttttcgtataagctatcctgaaaagcttatgcaaataagctgaaaacagttta 29116961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 480
Target Start/End: Complemental strand, 25720481 - 25720416
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    |||||||||| ||||||| ||||| ||||||| |||||||||||||| |||||| | |||||||||    
T  25720481 ctgttttcatgagctatcttggaacacttatggaaataagctaaaagaagtttatgaacatgtcat 25720416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 397 - 480
Target Start/End: Complemental strand, 36774789 - 36774706
Alignment:
Q  397 agataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||||  ||||||||||||||| ||||||||||||||| | |||||| ||||||||| ||| ||  ||  |||||||||||    
T  36774789 agataaaacaaagtcaaactgtttttataagctatcctggagagcttatggaaataagctgaaaccatctttaggacatgtcat 36774706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 316 - 480
Target Start/End: Original strand, 41052773 - 41052939
Alignment:
Q  316 tttggataaataatttaattaagtgcttttagcataaacgttaatcatata--agcgtatttataagctagttttataatgaaagataaaaagaagtcaa 413  Q
    |||||||||| ||||||||||||||||| ||||||||||| | |||| | |   || ||| ||||||||  ||  ||||| |||||| |||  || | ||    
T  41052773 tttggataaacaatttaattaagtgcttgtagcataaacgcttatcagacaggtgcttatgtataagctttttcaataataaaagatcaaataaacttaa 41052872  T
Q  414 actgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||||||||| ||||  |||| | |||||| ||||||| |||||  |||||| | |||||||||    
T  41052873 actgttttcataacctattttggagagcttatggaaataagttaaaaatagtttatgaacatgtcat 41052939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 460
Target Start/End: Original strand, 39105470 - 39105515
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    |||||||||||||||||| |||| |||||||| |||||||||||||    
T  39105470 ctgttttcataagctatcttggagaacttatgaaaataagctaaaa 39105515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 352
Target Start/End: Original strand, 6725120 - 6725156
Alignment:
Q  316 tttggataaataatttaattaagtgcttttagcataa 352  Q
    |||||||||||||||||||||||||||| ||||||||    
T  6725120 tttggataaataatttaattaagtgcttatagcataa 6725156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 7319075 - 7319031
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||    
T  7319075 aaactgttttcataagctatcttggagaacttatgaaaataagct 7319031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 28981889 - 28981941
Alignment:
Q  316 tttggataaataatttaattaagtgcttttagcataaacgttaatcatataag 368  Q
    ||||||||| ||| |||||||| ||||| ||||||||||||| ||||||||||    
T  28981889 tttggataagtaacttaattaattgcttatagcataaacgtttatcatataag 28981941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 416 - 478
Target Start/End: Complemental strand, 15074812 - 15074750
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtc 478  Q
    |||||||||||| ||| ||||||| |||||| ||||||||| ||| ||| ||| |||||||||    
T  15074812 tgttttcataagttatactggaaagcttatggaaataagctgaaaacagcttatggacatgtc 15074750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Complemental strand, 4014488 - 4014447
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    |||||||||||||||||| |||| |||||||| |||||||||    
T  4014488 ctgttttcataagctatcttggagaacttatgaaaataagct 4014447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 481
Target Start/End: Original strand, 4619710 - 4619779
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcatt 481  Q
    ||||||| ||||||||||||| |||| |||||||| ||||||| | ||| ||| ||| | ||||||||||    
T  4619710 aaactgtcttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcatt 4619779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 477
Target Start/End: Complemental strand, 40205137 - 40205076
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgt 477  Q
    |||||||||||||||||||||| | |||||  ||||||||| ||| ||| ||| ||||||||    
T  40205137 tgttttcataagctatcctggagagcttatagaaataagctgaaaacagattatggacatgt 40205076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 480
Target Start/End: Complemental strand, 41957515 - 41957450
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    |||||||||||||||||||| || |||||||| ||||||| | ||| ||  ||| |||||||||||    
T  41957515 ctgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcat 41957450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 316 - 417
Target Start/End: Original strand, 6739755 - 6739858
Alignment:
Q  316 tttggataaataatttaattaagtgcttttagcataaacgttaatcatataagcg--tatttataagctagttttataatgaaagataaaaagaagtcaa 413  Q
    |||||||||| |||| || ||||||||| || ||||| |||| ||||||||||||  ||| ||||||  | || |||||  ||||||||||  |||||||    
T  6739755 tttggataaacaattgaactaagtgcttatatcataagcgtttatcatataagcgtttatgtataagtcatttctataaataaagataaaataaagtcaa 6739854  T
Q  414 actg 417  Q
    ||||    
T  6739855 actg 6739858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 311 - 456
Target Start/End: Complemental strand, 32098503 - 32098353
Alignment:
Q  311 ctctatttggataaataatttaattaagtgcttttagcataaacgttaatcatataa-----gcgtatttataagctagttttataatgaaagataaaaa 405  Q
    ||||||||||||||| || ||| |||||||||| ||||||||||  | ||||||||      || ||| ||||||||| || |||||  ||||||||||     
T  32098503 ctctatttggataaacaacttacttaagtgcttatagcataaacagttatcatatactaaatgcttatatataagctatttctataacaaaagataaaat 32098404  T
Q  406 gaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
     |||||||| |||||||||||| |||  |||| |||||| | |||||||||    
T  32098403 aaagtcaaagtgttttcataagttattatggagaacttacggaaataagct 32098353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 431
Target Start/End: Original strand, 7282962 - 7283018
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaagtcaaactgttttcataagctat 431  Q
    ||||||||| ||||||||  ||||| |||| ||||||||||||||||||||||||||    
T  7282962 tataagctatttttataagaaaagaaaaaatgaagtcaaactgttttcataagctat 7283018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 42817550 - 42817452
Alignment:
Q  329 tttaattaagtgcttttagcataaacgttaatcatataagcgt--atttataagctagttttataatgaaagataaaaagaagtcaaactgttttcata 425  Q
    ||||||||||||||| |||||||| |||| |||||||||| ||  ||||||| | || || ||||   |||||||||| |||||||| |||||||||||    
T  42817550 tttaattaagtgcttatagcataagcgtttatcatataagtgttgatttatatgttatttctataccaaaagataaaatgaagtcaagctgttttcata 42817452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 468
Target Start/End: Original strand, 3611231 - 3611285
Alignment:
Q  414 actgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagttta 468  Q
    |||||||||| |||||||| |||| |||||||| ||||||||||||| |||||||    
T  3611231 actgttttcacaagctatcttggagaacttatgaaaataagctaaaaacagttta 3611285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 480
Target Start/End: Complemental strand, 1939398 - 1939331
Alignment:
Q  413 aactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||||||||||||||| ||||| | |||||| ||||||| | ||| ||| ||| |||||||||||    
T  1939398 aactgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcat 1939331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 477
Target Start/End: Original strand, 42131626 - 42131685
Alignment:
Q  418 ttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgt 477  Q
    ||||||||||||||| |||| |||||| | ||||||||| ||||||| ||| ||||||||    
T  42131626 ttttcataagctatcatggagaacttaaggaaataagcttaaagcagcttatggacatgt 42131685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 422 - 464
Target Start/End: Original strand, 4606938 - 4606980
Alignment:
Q  422 cataagctatcctggaaaacttatgcaaataagctaaaagcag 464  Q
    ||||||||||| |||| |||||||| |||||||||||||||||    
T  4606938 cataagctatcttggagaacttatgaaaataagctaaaagcag 4606980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 412 - 454
Target Start/End: Original strand, 9556242 - 9556284
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataag 454  Q
    ||||||||||||||||||||||| |||| |||||| |||||||    
T  9556242 aaactgttttcataagctatcctagaaagcttatgaaaataag 9556284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 22681249 - 22681187
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgt 477  Q
    |||||||||||| ||||||| || |||||||| ||||||||||||| ||| ||| | ||||||    
T  22681249 ctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgt 22681187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 456
Target Start/End: Original strand, 750680 - 750717
Alignment:
Q  419 tttcataagctatcctggaaaacttatgcaaataagct 456  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  750680 tttcataagctatcttggagaacttatgcaaataagct 750717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 480
Target Start/End: Complemental strand, 43456779 - 43456706
Alignment:
Q  407 aagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    |||||||| |||||   ||||||||| || ||||| |||| ||||||||| ||| ||||||| |||||||||||    
T  43456779 aagtcaaattgtttctgtaagctatcttgaaaaacatatggaaataagctgaaaacagtttatggacatgtcat 43456706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 452
Target Start/End: Original strand, 8017437 - 8017477
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaata 452  Q
    ||||||||||||||||||||| |||| |||||||| |||||    
T  8017437 aaactgttttcataagctatcttggagaacttatgaaaata 8017477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 397 - 445
Target Start/End: Complemental strand, 15203523 - 15203475
Alignment:
Q  397 agataaaaagaagtcaaactgttttcataagctatcctggaaaacttat 445  Q
    ||||||||  |||| |||||||||| |||||||||| ||||||||||||    
T  15203523 agataaaataaagttaaactgtttttataagctatcgtggaaaacttat 15203475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 33319879 - 33319835
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||||||| ||||| |||| |||||||| |||||||||    
T  33319879 aaactgttttcataaactatcttggagaacttatgaaaataagct 33319835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 480
Target Start/End: Original strand, 36852475 - 36852543
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||||||||||||||||| |||| | |||||| |||||| || |||  ||||||  ||||||||||    
T  36852475 aaactgttttcataagctatcttggagagcttatggaaataatctgaaaatagtttatagacatgtcat 36852543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 420 - 460
Target Start/End: Original strand, 43570425 - 43570465
Alignment:
Q  420 ttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    ||||||||| |||||||||| |||||| |||||||||||||    
T  43570425 ttcataagccatcctggaaagcttatgaaaataagctaaaa 43570465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 38; Significance: 0.000000000004; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 375 - 456
Target Start/End: Complemental strand, 44284184 - 44284103
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||| || |||||  ||| ||||||  ||||||||||||||||||||||||||||||| | |||||  |||||||||    
T  44284184 tataagctatttctataacaaaaaataaaacaaagtcaaactgttttcataagctatcctggagagcttatagaaataagct 44284103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 461
Target Start/End: Complemental strand, 44747472 - 44747426
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaag 461  Q
    |||||||||||||||||| ||||||||||||| ||||||||| ||||    
T  44747472 ctgttttcataagctatcttggaaaacttatgaaaataagctgaaag 44747426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 456
Target Start/End: Original strand, 2719471 - 2719515
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||    
T  2719471 aaactgttttcataagctatcttggagaacttatgaaaataagct 2719515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 460
Target Start/End: Original strand, 22667371 - 22667455
Alignment:
Q  377 taagctagttttataatgaaagataaaaagaagtcaaactgtttt-cataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    ||||||| || |||||  |||||||||| |||| ||||||||||| ||||||||||| |||| | |||| | |||||||||||||    
T  22667371 taagctacttctataacaaaagataaaatgaagccaaactgtttttcataagctatcttggagagcttacggaaataagctaaaa 22667455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 377 - 460
Target Start/End: Original strand, 22724010 - 22724094
Alignment:
Q  377 taagctagttttataatgaaagataaaaagaagtcaaactgtttt-cataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    ||||||| || |||||  |||||||||| |||| ||||||||||| ||||||||||| |||| | |||| | |||||||||||||    
T  22724010 taagctacttctataacaaaagataaaatgaagccaaactgtttttcataagctatcttggagagcttacggaaataagctaaaa 22724094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 24624217 - 24624281
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    |||||||||| |||||||| |||| ||||||  |||||||| ||| ||||||| |||||||||||    
T  24624217 tgttttcataggctatcctagaaatcttatgttaataagctgaaaacagtttatggacatgtcat 24624281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 34254875 - 34254807
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||| |||||||||||||| ||||| |||||||| ||||||||| |||| || ||| ||| |||||||    
T  34254875 aaactattttcataagctattctggagaacttatgtaaataagctgaaagtagcttatggatatgtcat 34254807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 412 - 480
Target Start/End: Original strand, 37273137 - 37273205
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||||||||||||||||| |||| |||||||| ||||||| | ||| ||  ||| |||||||||||    
T  37273137 aaactgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcat 37273205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 425
Target Start/End: Original strand, 38462167 - 38462275
Alignment:
Q  319 ggataaataatttaattaagtgcttttagcataaacgttaatcatataagcgt--atttataagctagttttataatgaaagataaaaagaagtcaaact 416  Q
    ||||||| || ||||||||| || |  |||||||||  | |||||||||| ||  |||||||||||| || ||||   ||||||||||  ||||||||||    
T  38462167 ggataaacaagttaattaagcgcctaaagcataaacacttatcatataagtgtttatttataagctatttctataccaaaagataaaataaagtcaaact 38462266  T
Q  417 gttttcata 425  Q
    |||||||||    
T  38462267 gttttcata 38462275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 355
Target Start/End: Original strand, 51130613 - 51130658
Alignment:
Q  310 gctctatttggataaataatttaattaagtgcttttagcataaacg 355  Q
    |||||||||||||||| || |||| ||||||||| |||||||||||    
T  51130613 gctctatttggataaagaacttaagtaagtgcttgtagcataaacg 51130658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 460
Target Start/End: Complemental strand, 20170775 - 20170727
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    ||||||||||| ||||||||| || | | ||||||||||||||||||||    
T  20170775 aaactgttttcctaagctatcttgtagagcttatgcaaataagctaaaa 20170727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 456
Target Start/End: Original strand, 21367674 - 21367714
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||||||||| |||| |||||||| |||||||||    
T  21367674 tgttttcataagctatcttggagaacttatgaaaataagct 21367714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 460
Target Start/End: Original strand, 24785212 - 24785256
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    ||||||||||||||||||| || | |||||| |||||||||||||    
T  24785212 tgttttcataagctatcctcgagagcttatgtaaataagctaaaa 24785256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 456
Target Start/End: Complemental strand, 49465728 - 49465688
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    |||||||||||||||| ||||| |||||||| |||||||||    
T  49465728 tgttttcataagctatactggagaacttatggaaataagct 49465688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000002; HSPs: 13)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 316 - 425
Target Start/End: Complemental strand, 27481481 - 27481370
Alignment:
Q  316 tttggataaataatttaattaagtgcttttagcataaacgttaatcatataagcgt--atttataagctagttttataatgaaagataaaaagaagtcaa 413  Q
    |||||||||| || ||||||| |||||| ||||||||| ||| || ||||||| ||  || ||||||||| || |||||  || ||||||| ||||||||    
T  27481481 tttggataaacaacttaattaggtgcttatagcataaatgtttattatataagtgtttatgtataagctatttctataacaaaggataaaacgaagtcaa 27481382  T
Q  414 actgttttcata 425  Q
    ||||||| ||||    
T  27481381 actgtttccata 27481370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 395 - 456
Target Start/End: Original strand, 7244666 - 7244727
Alignment:
Q  395 aaagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||  |||||||||||||||||||||||||  |||| | |||||| |||||||||    
T  7244666 aaagataaaagaaagtcaaactgttttcataagctatattggagagcttatgaaaataagct 7244727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 316 - 370
Target Start/End: Complemental strand, 753391 - 753337
Alignment:
Q  316 tttggataaataatttaattaagtgcttttagcataaacgttaatcatataagcg 370  Q
    |||||||||| || ||||||||||| || |||||||||| || ||||||||||||    
T  753391 tttggataaacaacttaattaagtgtttatagcataaacatttatcatataagcg 753337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 477
Target Start/End: Original strand, 38010720 - 38010782
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgt 477  Q
    |||||||||||| ||||||| || |||||||| ||||||||||||| ||| ||| | ||||||    
T  38010720 ctgttttcataatctatcctagagaacttatggaaataagctaaaaacagcttatgaacatgt 38010782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 480
Target Start/End: Original strand, 12110366 - 12110431
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    |||||||||||||||||| || | |||||||| |||||| |||||| ||||||  | |||||||||    
T  12110366 ctgttttcataagctatcttgaagaacttatgaaaataatctaaaaacagtttgtgaacatgtcat 12110431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Complemental strand, 15321848 - 15321807
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||||||||||||| ||| |||||| |||||||||    
T  15321848 ctgttttcataagctatcctgaaaagcttatggaaataagct 15321807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Complemental strand, 18749881 - 18749840
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||||||||||  |||||||||||| |||||||||    
T  18749881 ctgttttcataagctatcacggaaaacttatggaaataagct 18749840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 453
Target Start/End: Original strand, 36060001 - 36060042
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataa 453  Q
    |||||||||||||||||||||||||| | |||||| ||||||    
T  36060001 aaactgttttcataagctatcctggatagcttatggaaataa 36060042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Complemental strand, 40689050 - 40689009
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    |||| |||||||||||||||||| |||||||| |||||||||    
T  40689050 ctgtgttcataagctatcctggataacttatgaaaataagct 40689009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 480
Target Start/End: Original strand, 45078276 - 45078349
Alignment:
Q  407 aagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    |||||||||| |||||||||||||||  ||| ||||| || ||||||| | ||| ||| ||| |||||||||||    
T  45078276 aagtcaaacttttttcataagctatcacggataacttgtggaaataagttgaaaacagcttatggacatgtcat 45078349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 316 - 352
Target Start/End: Original strand, 504115 - 504151
Alignment:
Q  316 tttggataaataatttaattaagtgcttttagcataa 352  Q
    |||||||||||| ||||||||||||||| ||||||||    
T  504115 tttggataaatagtttaattaagtgcttatagcataa 504151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 418 - 454
Target Start/End: Original strand, 5276240 - 5276276
Alignment:
Q  418 ttttcataagctatcctggaaaacttatgcaaataag 454  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  5276240 ttttcataagctatcctggaaaactaatgaaaataag 5276276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 375 - 451
Target Start/End: Complemental strand, 35809030 - 35808954
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaat 451  Q
    ||||||||| || |||||  ||||||||||   |||||||||  |||  ||||||||||||||||||||||| ||||    
T  35809030 tataagctatttctataacaaaagataaaatatagtcaaactaattttgtaagctatcctggaaaacttatgaaaat 35808954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000002; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 375 - 479
Target Start/End: Original strand, 47970262 - 47970366
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggaca 474  Q
    ||||||||| || |||||  |||||||||| ||||||||||| |||||| |  ||||| |||| | |||||||||||||||| ||| || |||| ||| |    
T  47970262 tataagctatttctataacaaaagataaaatgaagtcaaactattttcaaattctatcatggagagcttatgcaaataagctgaaaacaatttatggaaa 47970361  T
Q  475 tgtca 479  Q
    |||||    
T  47970362 tgtca 47970366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 375 - 453
Target Start/End: Complemental strand, 51044585 - 51044506
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaagtcaaact-gttttcataagctatcctggaaaacttatgcaaataa 453  Q
    ||||||||| || |||||  ||||||||||  |||||||||| |||||||||||||||||| || |||||||| ||||||    
T  51044585 tataagctatttctataacaaaagataaaataaagtcaaacttgttttcataagctatcctagagaacttatgaaaataa 51044506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 456
Target Start/End: Original strand, 4191683 - 4191765
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaa-gtcaaactgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||| || |||||  ||||||||||| || ||||||||||||||||||| ||||||||| | | |||| |||||||||    
T  4191683 tataagctatttctataacaaaagataaaaataaagtcaaactgttttcataagttatcctggagagcgtatggaaataagct 4191765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 416 - 460
Target Start/End: Complemental strand, 17822928 - 17822884
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    ||||||||||||||||| |||| |||||||| |||||||||||||    
T  17822928 tgttttcataagctatcttggagaacttatgaaaataagctaaaa 17822884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 4798629 - 4798566
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtca 479  Q
    ||||||||||||||||| |||| | |||||||||||||||| ||| ||| ||| | ||||||||    
T  4798629 tgttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtca 4798566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 460
Target Start/End: Complemental strand, 16200045 - 16200000
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    |||||||||||||||||| ||||  ||||||| |||||||||||||    
T  16200045 ctgttttcataagctatcttggaggacttatgaaaataagctaaaa 16200000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 460
Target Start/End: Complemental strand, 55547112 - 55547063
Alignment:
Q  411 caaactgttttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    ||||||||||||||||||||| ||| |||  ||||| |||||||||||||    
T  55547112 caaactgttttcataagctatgctgaaaagtttatggaaataagctaaaa 55547063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 11264308 - 11264372
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||||||||| ||||| || | |||||| ||||||| | ||| ||||||| |||||||||||    
T  11264308 tgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcat 11264372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 353
Target Start/End: Original strand, 31059536 - 31059572
Alignment:
Q  317 ttggataaataatttaattaagtgcttttagcataaa 353  Q
    |||||||||||| |||||||||||||||||| |||||    
T  31059536 ttggataaataacttaattaagtgcttttagtataaa 31059572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 42866075 - 42866139
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||||||||||||||| || | |||||| || |||||||||||||  ||| |||||| ||||    
T  42866075 tgttttcataagctatccttgagagcttatggaagtaagctaaaagcatcttatggacatatcat 42866139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 456
Target Start/End: Complemental strand, 53673725 - 53673681
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||||||||||||| |||| | |||||| |||||||||    
T  53673725 aaactgttttcataagctatcttggagagcttatgtaaataagct 53673681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 425
Target Start/End: Complemental strand, 1259 - 1150
Alignment:
Q  318 tggataaataatttaattaagtgcttttagcataaacgttaatcatataa--gcgtatttataagctagttttataatgaaagataaaaagaagtcaaac 415  Q
    |||||||| || |||||||||| ||| ||||||||||||  |||||||||  || ||| ||||||||| || |||||  ||||||||||  |||||||||    
T  1259 tggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaac 1160  T
Q  416 tgttttcata 425  Q
    | || |||||    
T  1159 tattctcata 1150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0275 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 425
Target Start/End: Original strand, 2716 - 2825
Alignment:
Q  318 tggataaataatttaattaagtgcttttagcataaacgttaatcatataa--gcgtatttataagctagttttataatgaaagataaaaagaagtcaaac 415  Q
    |||||||| || |||||||||| ||| ||||||||||||  |||||||||  || ||| ||||||||| || |||||  ||||||||||  |||||||||    
T  2716 tggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtcaaac 2815  T
Q  416 tgttttcata 425  Q
    | || |||||    
T  2816 tattctcata 2825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000002; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 368
Target Start/End: Complemental strand, 24263328 - 24263274
Alignment:
Q  314 tatttggataaataatttaattaagtgcttttagcataaacgttaatcatataag 368  Q
    |||||||||||| | ||||||||||||||| ||||||||||||| | ||||||||    
T  24263328 tatttggataaacagtttaattaagtgcttatagcataaacgtttagcatataag 24263274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 375 - 480
Target Start/End: Complemental strand, 46499980 - 46499873
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaagtcaaactgttttcat--aagctatcctggaaaacttatgcaaataagctaaaagcagtttaggga 472  Q
    ||||||||| || |||||  ||||||||||  |||||||| |||||| ||  ||||| || |||| | |||||| ||||||| | ||| |||||||||||    
T  46499980 tataagctatttctataagaaaagataaaataaagtcaaattgtttttatttaagctttcatggagagcttatgaaaataaggttaaaacagtttaggga 46499881  T
Q  473 catgtcat 480  Q
    ||||||||    
T  46499880 catgtcat 46499873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 458
Target Start/End: Complemental strand, 38651535 - 38651452
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaagtcaaactgttttcataagctatcctggaaaacttatgcaaataagctaa 458  Q
    ||||||||| || |||||  |||||||||   ||||| || |||||||||||||||||||||| | |||||  |||||||||||    
T  38651535 tataagctaattctataacaaaagataaactaaagtcgaattgttttcataagctatcctggagagcttataaaaataagctaa 38651452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 481
Target Start/End: Complemental strand, 6231880 - 6231814
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcatt 481  Q
    |||||||| ||||||| |||| | |||||||  ||||||||| ||| ||||||| ||||||||||||    
T  6231880 ctgttttcgtaagctaacctgaagaacttatagaaataagctgaaaacagtttatggacatgtcatt 6231814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 28262683 - 28262621
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgt 477  Q
    ||||||||||||| ||||||  | |||||||| ||||||||||||| || |||| ||||||||    
T  28262683 ctgttttcataagttatcctatagaacttatggaaataagctaaaaacaatttatggacatgt 28262621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 456
Target Start/End: Complemental strand, 7137062 - 7137021
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    |||||||||||||||||| |||| |||||||| |||||||||    
T  7137062 ctgttttcataagctatcttggagaacttatgaaaataagct 7137021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 460
Target Start/End: Original strand, 15709834 - 15709898
Alignment:
Q  398 gataaaaagaagtcaaactgttttcataagctatcctggaaaa--cttatgcaaataagctaaaa 460  Q
    |||||||  |||||||||||||||||| ||||||| | |||||  |||||||||||| |||||||    
T  15709834 gataaaattaagtcaaactgttttcatgagctatcatagaaaaagcttatgcaaataggctaaaa 15709898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 480
Target Start/End: Original strand, 27140484 - 27140549
Alignment:
Q  415 ctgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||| |||||||||| |||| | |||||||||||||||| ||| ||  ||| |||||||||||    
T  27140484 ctgtttttataagctatcatggagagcttatgcaaataagctgaaaacaacttatggacatgtcat 27140549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 456
Target Start/End: Original strand, 8130443 - 8130483
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||||||||| ||||||||||||| ||| |||||    
T  8130443 tgttttcataagctatcatggaaaacttatggaaacaagct 8130483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 480
Target Start/End: Complemental strand, 11639483 - 11639415
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcat 480  Q
    ||||||||| |||||| ||| || || | |||||| ||||||||||||| ||| ||| |||||||||||    
T  11639483 aaactgtttgcataagttattctagagagcttatgaaaataagctaaaaacagcttatggacatgtcat 11639415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 416 - 456
Target Start/End: Complemental strand, 12564562 - 12564522
Alignment:
Q  416 tgttttcataagctatcctggaaaacttatgcaaataagct 456  Q
    ||||||||||||||||| |||| |||||||| |||||||||    
T  12564562 tgttttcataagctatcttggagaacttatggaaataagct 12564522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 395 - 435
Target Start/End: Complemental strand, 23373396 - 23373356
Alignment:
Q  395 aaagataaaaagaagtcaaactgttttcataagctatcctg 435  Q
    ||||||||||  ||||||| |||||||||||||||||||||    
T  23373396 aaagataaaataaagtcaatctgttttcataagctatcctg 23373356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 460
Target Start/End: Complemental strand, 23544706 - 23544658
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    |||||||||||||||||||||  |||||||||||| | ||| |||||||    
T  23544706 aaactgttttcataagctatctcggaaaacttatgaacatacgctaaaa 23544658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 407 - 439
Target Start/End: Complemental strand, 26293200 - 26293168
Alignment:
Q  407 aagtcaaactgttttcataagctatcctggaaa 439  Q
    |||||||| ||||||||||||||||||||||||    
T  26293200 aagtcaaattgttttcataagctatcctggaaa 26293168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 375 - 431
Target Start/End: Complemental strand, 28077173 - 28077117
Alignment:
Q  375 tataagctagttttataatgaaagataaaaagaagtcaaactgttttcataagctat 431  Q
    ||||||||| || |||||  ||||||||||  || ||||||||||||||||||||||    
T  28077173 tataagctatttctataaccaaagataaaagaaaatcaaactgttttcataagctat 28077117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 412 - 460
Target Start/End: Complemental strand, 38867898 - 38867850
Alignment:
Q  412 aaactgttttcataagctatcctggaaaacttatgcaaataagctaaaa 460  Q
    |||||||||||||||| |||| || | |||||||| |||||||||||||    
T  38867898 aaactgttttcataagttatcttgaagaacttatgaaaataagctaaaa 38867850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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