View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0858_low_26 (Length: 205)
Name: NF0858_low_26
Description: NF0858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0858_low_26 |
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Alignment Details
Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 22 - 171
Target Start/End: Original strand, 38840729 - 38840878
Alignment:
| Q |
22 |
gttggttttggtatcaaagataatgtggctaagttggaggcaaattatggttgtggaatcataaatgctgttgaacttggacccttggctgctactgcca |
121 |
Q |
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| T |
38840729 |
gttggttttggtatcaaagataatgtggctaagttggagtcaaattatggttgtggaatcataaatgctgttgaacttggacccttggctgctactgcca |
38840828 |
T |
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| Q |
122 |
tgaagaaacctcgtttggcttatatcggtgttgatgaactgctttctgtg |
171 |
Q |
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| T |
38840829 |
tgaagaaacctcgtttggcttatatcggtgttgatgagctgctttctgtg |
38840878 |
T |
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