View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0859_low_16 (Length: 412)
Name: NF0859_low_16
Description: NF0859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0859_low_16 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 98 - 391
Target Start/End: Original strand, 18713802 - 18714091
Alignment:
| Q |
98 |
gaatgaacaacatcaattgttattgaaagatggtgaataactaannnnnnnnnnnnnataaaaatataaataaaatcatattcttctccaaaaaacttag |
197 |
Q |
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| T |
18713802 |
gaatgaacaacatcaattgttattgaaagatggtgaataactaattttttttt----ataaaaatataaataaaatcatatccttctccaaaaaacttag |
18713897 |
T |
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| Q |
198 |
gaatgttcaatatttgttctccataaattgctttgtgcattcaaaaaccgtccatattcttgaaaattcagatatgaaacttagtaatcttcaccttacc |
297 |
Q |
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| T |
18713898 |
gaatgttcaatatttgttctccataaattgctttgtgcattcaaaaatcgtccatattcttgaaaattcagatatgaaacttagtaatcttcaccttacc |
18713997 |
T |
|
| Q |
298 |
atgcgtcgatcacccatatgttttatattgaagacaggagaaatgacataatttactagttaaagaattagaattttgtactgatattgttgga |
391 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
18713998 |
atgcgtcgatcacccatatgttttatattgaagacaggagaaatcacataatttactagttaaagaattagaattttgtactgataatgttgga |
18714091 |
T |
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