View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0864_high_25 (Length: 254)
Name: NF0864_high_25
Description: NF0864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0864_high_25 |
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Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 27025705 - 27025929
Alignment:
| Q |
1 |
cagtagcaacccggcgagataacttctgaatcacacacagtatacacattatcctctaaccctaaccttcttcctttttcttaactatatccaataaaaa |
100 |
Q |
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| T |
27025705 |
cagtagcaacccggcgagataacttctgaatcacacacagtatacacattatcctctaaccctaaccttcttcctttttcttaactatatccaataaaaa |
27025804 |
T |
|
| Q |
101 |
tcaatgctttcaagaaaaccctaataaccctctttacctttcttcctcaaaaacaataccaacagaattttaccaccaaaaacttcagaaccctaaaatc |
200 |
Q |
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| T |
27025805 |
tcaatgctttcaagaaaaccctaataaccctctttacctttcttcctcaaaaacaataccaacagaattttaccaccaaaaacttcagaaccctaaaatc |
27025904 |
T |
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| Q |
201 |
ccaaaccaaacaaaaaatggaaata |
225 |
Q |
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||||||||||||||||||||||||| |
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| T |
27025905 |
ccaaaccaaacaaaaaatggaaata |
27025929 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 26969183 - 26969247
Alignment:
| Q |
3 |
gtagcaacccggcgagataacttctgaatcacacacagtatacacattatcctctaaccctaacc |
67 |
Q |
| |
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||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||| |||| |
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| T |
26969183 |
gtagcaacccggcgagaacacttctgaatgacacacagtatacacattatcctcttacccaaacc |
26969247 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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