View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0864_low_13 (Length: 335)

Name: NF0864_low_13
Description: NF0864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0864_low_13
NF0864_low_13
[»] chr6 (6 HSPs)
chr6 (7-218)||(18804817-18805040)
chr6 (227-308)||(18804219-18804300)
chr6 (228-268)||(24848402-24848442)
chr6 (227-307)||(5002414-5002494)
chr6 (227-307)||(7693967-7694047)
chr6 (260-311)||(9491651-9491702)
[»] chr7 (9 HSPs)
chr7 (227-308)||(29914446-29914527)
chr7 (227-307)||(2008589-2008669)
chr7 (227-308)||(13057869-13057951)
chr7 (227-304)||(31330394-31330471)
chr7 (227-271)||(6068097-6068141)
chr7 (227-307)||(36901081-36901161)
chr7 (228-308)||(38360826-38360906)
chr7 (230-270)||(19753042-19753082)
chr7 (227-307)||(37698488-37698568)
[»] chr1 (11 HSPs)
chr1 (227-308)||(52353831-52353912)
chr1 (227-307)||(47783697-47783777)
chr1 (228-304)||(11569964-11570040)
chr1 (227-307)||(13984038-13984118)
chr1 (227-271)||(36297983-36298027)
chr1 (227-307)||(43822776-43822856)
chr1 (228-304)||(11566926-11567002)
chr1 (227-271)||(32851839-32851883)
chr1 (227-271)||(42831645-42831689)
chr1 (236-304)||(43506267-43506335)
chr1 (227-271)||(44665396-44665440)
[»] chr8 (16 HSPs)
chr8 (227-308)||(28540671-28540752)
chr8 (227-308)||(6427145-6427226)
chr8 (227-304)||(11777714-11777791)
chr8 (229-301)||(6519092-6519164)
chr8 (227-307)||(9134151-9134231)
chr8 (227-307)||(31226513-31226593)
chr8 (242-308)||(30714092-30714158)
chr8 (242-308)||(30721869-30721935)
chr8 (227-308)||(36316762-36316842)
chr8 (227-271)||(1737808-1737852)
chr8 (227-307)||(5139719-5139799)
chr8 (227-271)||(10954152-10954196)
chr8 (227-271)||(10962157-10962201)
chr8 (227-307)||(18806612-18806692)
chr8 (227-271)||(23036794-23036838)
chr8 (227-259)||(28557246-28557278)
[»] chr2 (8 HSPs)
chr2 (227-307)||(11921944-11922024)
chr2 (227-289)||(13022786-13022848)
chr2 (227-307)||(26312471-26312551)
chr2 (241-306)||(18970010-18970075)
chr2 (227-304)||(34820926-34821003)
chr2 (227-271)||(5038711-5038755)
chr2 (227-271)||(34375050-34375093)
chr2 (227-271)||(39368734-39368778)
[»] chr4 (7 HSPs)
chr4 (229-308)||(53096651-53096730)
chr4 (227-306)||(54018494-54018573)
chr4 (227-304)||(30865891-30865968)
chr4 (227-307)||(39055162-39055242)
chr4 (230-307)||(2574093-2574170)
chr4 (227-307)||(35332027-35332107)
chr4 (227-307)||(52199803-52199883)
[»] chr5 (8 HSPs)
chr5 (227-307)||(13420752-13420832)
chr5 (227-307)||(837791-837869)
chr5 (227-304)||(3558772-3558849)
chr5 (227-308)||(35463271-35463352)
chr5 (227-307)||(2375548-2375628)
chr5 (227-307)||(7293046-7293126)
chr5 (227-271)||(11200736-11200780)
chr5 (227-307)||(42951776-42951856)
[»] chr3 (2 HSPs)
chr3 (227-313)||(33831978-33832064)
chr3 (227-308)||(46048883-46048964)
[»] scaffold0712 (1 HSPs)
scaffold0712 (227-271)||(6140-6184)
[»] scaffold0709 (1 HSPs)
scaffold0709 (227-271)||(6158-6202)


Alignment Details
Target: chr6 (Bit Score: 109; Significance: 8e-55; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 18805040 - 18804817
Alignment:
Q  7 ggagcagagagagaaggcagtgtggcttgtgtgagagggagacaatagagagaattgaattaagttttgctatgccacctaagaccattctgaatg---g 103  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||   |    
T  18805040 ggagaagagagagaaggcagtgtggcatgtgtgagagggagacaatagagagaattgaattaagttttgccatgtcacctaagaccattttgaatggatg 18804941  T
Q  104 gtctcaaattttgaagact-tatacctattgggtaactctattgggaagaattttcttt--------acgatcttataagacctaagatttcacttaaca 194  Q
    |||||||||||||||||||   || ||||||||||||||||||||||||  |||| |||        |||||| ||||||||||||| ||| ||||||||    
T  18804940 gtctcaaattttgaagactgggtatctattgggtaactctattgggaagtttttttttttttttttgacgatcctataagacctaaggtttgacttaaca 18804841  T
Q  195 ctactcaattaagtaagacccaca 218  Q
    ||||| || |||||||||||||||    
T  18804840 ctactaaaataagtaagacccaca 18804817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 18804300 - 18804219
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||||||    
T  18804300 aatattaataaattgaaatgtaataatataaaattattgatagttgattagtaagttccatttatgaaatttgtgtgagatg 18804219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 24848402 - 24848442
Alignment:
Q  228 atattaataaattgaaatgtaataatataaaattattggta 268  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  24848402 atattaaaaaattgaaatgtaataatataaaattattggta 24848442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 5002494 - 5002414
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||| | |||||||||| |||||||||||| |||||| |||||  |||||  || ||||||| ||| ||||||||||||    
T  5002494 aatatttaaaaattgaaatataataatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagat 5002414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 7694047 - 7693967
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| ||||||||||||| | |||| || |||||| |||||  |||||  ||||||||||  |||||||||||||||    
T  7694047 aatattaaaaaattgaaatgtattgatatgaagttattgatagttgattagtgggttccatttaaaaaatttgtgtgagat 7693967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 9491702 - 9491651
Alignment:
Q  260 ttattggtagtttgttagtaagttccatttatgaaatttgtgtgagatgatg 311  Q
    |||||| |||||  |||||| || ||||||||||||||||||||||||||||    
T  9491702 ttattgatagttgattagtatgtcccatttatgaaatttgtgtgagatgatg 9491651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 29914527 - 29914446
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||  ||||  ||| |||||||||||||||||||||||||    
T  29914527 aatattaaaaaattgaaatgtaataatataaagttattgatagttgattagcgagtcccatttatgaaatttgtgtgagatg 29914446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 2008589 - 2008669
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| |||||||||||||||  ||||||||||||| |||||  |||    |||||||||| ||||||||||||||||    
T  2008589 aatattaaaaaattgaaatgtaatggtataaaattattgatagttgattaacgggttccatttaagaaatttgtgtgagat 2008669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 13057869 - 13057951
Alignment:
Q  227 aatattaataaatt-gaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    |||||||| ||||| ||||||| || ||||||| |||||| |||||  |||||||||  |||||| |||||||||||||||||    
T  13057869 aatattaaaaaatttgaaatgttatgatataaagttattgatagttgattagtaagtcacatttaagaaatttgtgtgagatg 13057951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 31330394 - 31330471
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtga 304  Q
    |||||||| ||||||||||||||| ||||| | |||||| |||||  |||||| ||  |||||| |||||||||||||    
T  31330394 aatattaaaaaattgaaatgtaatgatatatacttattgatagttgattagtacgtctcatttaagaaatttgtgtga 31330471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 6068097 - 6068141
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||    
T  6068097 aatattaaaaaattgaaatgtaatgatagaaaattattggtagtt 6068141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 36901161 - 36901081
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| ||||| |||| |||| |||||||||||||| |||||  |||||| ||  |||||| ||||||| ||||||||    
T  36901161 aatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtctcatttaagaaatttttgtgagat 36901081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 308
Target Start/End: Complemental strand, 38360906 - 38360826
Alignment:
Q  228 atattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    ||||||| |||||||||||| ||| |||| | |||||| ||||| || ||| | |||||||||  ||||||||||||||||    
T  38360906 atattaaaaaattgaaatgtgatagtatatagttattgatagttggtaagtgaattccatttaaaaaatttgtgtgagatg 38360826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 19753082 - 19753042
Alignment:
Q  230 attaataaattgaaatgtaataatataaaattattggtagt 270  Q
    ||||| ||||||||||||||| |||||||||||||| ||||    
T  19753082 attaaaaaattgaaatgtaatgatataaaattattgatagt 19753042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 37698488 - 37698568
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| ||||| ||||||| | ||||||| || ||| |||||| |||||  ||| |||||| ||| ||||||||||||    
T  37698488 aatattaaaaaattaaaatgtagtgatataaagttgttgatagtttattagtgggtttcatttaagaattttgtgtgagat 37698568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 52353912 - 52353831
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||  |||||  |||| ||||| |||||||||||||||||    
T  52353912 aatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgggttctatttaagaaatttgtgtgagatg 52353831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 47783777 - 47783697
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| |||||||||| |||| |||||||||||||| |||||  ||| || |||||||||| ||| ||||||||||||    
T  47783777 aatattaaaaaattgaaatataatgatataaaattattgatagttgattaataggttccatttaagaactttgtgtgagat 47783697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 11570040 - 11569964
Alignment:
Q  228 atattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtga 304  Q
    ||||||| ||||||||||||||| ||||||| |||||| |||||  ||| |||||  |||||  |||||||||||||    
T  11570040 atattaaaaaattgaaatgtaatgatataaagttattgatagttgattaataagtctcatttgagaaatttgtgtga 11569964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 13984038 - 13984118
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| ||||||||||||| | ||||||| |||||| |||||  |||||| ||  |||||| ||| ||||||||||||    
T  13984038 aatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtaggtctcatttaagaattttgtgtgagat 13984118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 36297983 - 36298027
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||||||||||||| |||||||||||||| |||||    
T  36297983 aatattaaaaaattgaaatgtaatgatataaaattattgatagtt 36298027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 43822776 - 43822856
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| ||||||||||||| | ||||||| |||||| |||||  |||||  || ||||||| ||| ||||||||||||    
T  43822776 aatattaaaaaattgaaatgtagtgatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagat 43822856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 304
Target Start/End: Complemental strand, 11567002 - 11566926
Alignment:
Q  228 atattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtga 304  Q
    ||||||| ||| ||||||||||| ||||||| |||||| |||||  ||| |||||  |||||  |||||||||||||    
T  11567002 atattaaaaaaatgaaatgtaatgatataaagttattgatagttgattaataagtctcatttgagaaatttgtgtga 11566926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 32851883 - 32851839
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||||||||||| | |||||||||||||| |||||    
T  32851883 aatattaaaaaattgaaatgtagtgatataaaattattgatagtt 32851839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 42831645 - 42831689
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||| ||||||||| |||||||||||||| |||||    
T  42831645 aatattaaaaaattaaaatgtaatgatataaaattattgatagtt 42831689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 43506267 - 43506335
Alignment:
Q  236 aaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtga 304  Q
    ||||||||||||||||||||||| |||||| |||||  ||||| |||   |||||  ||||||||||||    
T  43506267 aaattgaaatgtaataatataaagttattgatagttgattagtgagtcaaatttaataaatttgtgtga 43506335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 44665440 - 44665396
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| |||||||||| |||| |||||||||||||| |||||    
T  44665440 aatattaaaaaattgaaatataatgatataaaattattgatagtt 44665396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 28540671 - 28540752
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    |||||||| ||||||||||||||| |||||||| ||||| |||||  ||||| |||  | |||| |||||||||||||||||    
T  28540671 aatattaaaaaattgaaatgtaatgatataaaactattgatagttgattagtgagtctcttttaagaaatttgtgtgagatg 28540752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 6427226 - 6427145
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    |||||||| ||||| |||| |||| |||||||||||||| |||||  |||||| || | |||||  ||||||||||||||||    
T  6427226 aatattaaaaaattaaaatataatgatataaaattattgatagttgattagtaggtcctatttaaaaaatttgtgtgagatg 6427145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 11777791 - 11777714
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtga 304  Q
    |||||||| || |||||||||||| ||||||| |||||| |||||  |||||| ||  |||||| |||||||||||||    
T  11777791 aatattaaaaagttgaaatgtaatgatataaagttattgatagttgattagtaggtctcatttaagaaatttgtgtga 11777714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 301
Target Start/End: Complemental strand, 6519164 - 6519092
Alignment:
Q  229 tattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtg 301  Q
    |||||| ||||||||||||||| ||||||| |||||| |||||  ||||| |||  |||||| ||||||||||    
T  6519164 tattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcatttaagaaatttgtg 6519092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 9134151 - 9134231
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| |||||||||| |||| ||||||| |||||| |||||  ||||| |||  |||||| ||| ||||||||||||    
T  9134151 aatattaaaaaattgaaatataatgatataaagttattgatagttgattagtgagtctcatttaagaactttgtgtgagat 9134231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 31226593 - 31226513
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| |||||||||| |||| |||||||||||||| |||||   ||||  || ||||||| ||| ||||||||||||    
T  31226593 aatattaaaaaattgaaatataatgatataaaattattgatagttgagtagtgggtcccatttaagaactttgtgtgagat 31226513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 30714158 - 30714092
Alignment:
Q  242 aaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    ||||||||| ||||||| |||||| |||||  ||||| ||| |||||||  ||||||||||||||||    
T  30714158 aaatgtaatgatataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagatg 30714092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 308
Target Start/End: Complemental strand, 30721935 - 30721869
Alignment:
Q  242 aaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    ||||||||| ||||||| |||||| |||||  ||||| ||| |||||||  ||||||||||||||||    
T  30721935 aaatgtaatgatataaagttattgatagttgattagtgagtcccatttacaaaatttgtgtgagatg 30721869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 36316762 - 36316842
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    |||||||| ||||||||||||||| |||||||||||||| |||||  | |  || ||||| ||| ||||||| |||||||||    
T  36316762 aatattaa-aaattgaaatgtaatgatataaaattattgatagttgatcatgaaattccacttaagaaatttctgtgagatg 36316842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 1737852 - 1737808
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    ||||| || ||||||||||||||||||||||| |||||| |||||    
T  1737852 aatataaaaaaattgaaatgtaataatataaagttattgatagtt 1737808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 5139799 - 5139719
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| ||||  |||| |||| |||||||||||||| |||||  ||||| |||| |||||| ||  ||||||||||||    
T  5139799 aatattaaaaaatgaaaatataatgatataaaattattgatagttgattagtgagtttcatttaagagctttgtgtgagat 5139719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 10954196 - 10954152
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||||||||||||| ||||||||| |||| |||||    
T  10954196 aatattaaaaaattgaaatgtaatgatataaaataattgatagtt 10954152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 10962201 - 10962157
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||||||||||||| ||||||||| |||| |||||    
T  10962201 aatattaaaaaattgaaatgtaatgatataaaataattgatagtt 10962157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 18806692 - 18806612
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| |||||||||| |||| ||||||| |||||| |||||  |||||   | |||||||  |||||||||||||||    
T  18806692 aatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatttaaaaaatttgtgtgagat 18806612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 23036794 - 23036838
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||||| ||||||| |||||||||||||| |||||    
T  23036794 aatattaaaaaattgatatgtaatgatataaaattattgatagtt 23036838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 259
Target Start/End: Original strand, 28557246 - 28557278
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaa 259  Q
    |||||||| ||||||||||||||||||||||||    
T  28557246 aatattaaaaaattgaaatgtaataatataaaa 28557278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 11921944 - 11922024
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| |||||  ||| |||| ||||||| ||||||||||||  |||||| || ||||||| ||||||||||||||||    
T  11921944 aatattaaaaaattagaatctaatgatataaagttattggtagttgattagtaggtcccatttaagaaatttgtgtgagat 11922024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 227 - 289
Target Start/End: Complemental strand, 13022848 - 13022786
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccattt 289  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||  ||||| |||| |||||    
T  13022848 aatattaaaaaattgaaatgtaataatataaatttattgatagttgattagtgagtttcattt 13022786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 26312471 - 26312551
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| |||| |||||||||| | ||||| ||||||||||||  |||||  |||| |||||  |||||||||||||||    
T  26312471 aatattaaaaaatagaaatgtaatgacataaagttattggtagttgattagtgggttctatttaataaatttgtgtgagat 26312551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 18970010 - 18970075
Alignment:
Q  241 gaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgaga 306  Q
    |||||||||| ||||||| |||||  |||||  ||||| |||| |||||| |||||||||||||||    
T  18970010 gaaatgtaattatataaagttattaatagttgattagtgagtttcatttaagaaatttgtgtgaga 18970075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Complemental strand, 34821003 - 34820926
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtga 304  Q
    |||||||| ||||| ||||||||| ||||||| ||| || |||||  ||  |||||||| |||| |||||||||||||    
T  34821003 aatattaaaaaattaaaatgtaatgatataaagttactgatagttgattgataagttccgtttaagaaatttgtgtga 34820926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 5038711 - 5038755
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||| |||| ||||||||||||||||||| |||||    
T  5038711 aatattaaaaaattaaaatataataatataaaattattgatagtt 5038755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 34375050 - 34375093
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||    
T  34375050 aatattaa-aaattgaaatgtaataatataaagttattgatagtt 34375093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 39368734 - 39368778
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||| | |||||||||||||| ||||||||||||||| |||||    
T  39368734 aatattcaaaaattgaaatgtaaaaatataaaattattgatagtt 39368778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 308
Target Start/End: Complemental strand, 53096730 - 53096651
Alignment:
Q  229 tattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    |||||| || |||| ||||||||||||||| |||||| |||||  |||||  || ||||||| |||||||||||||||||    
T  53096730 tattaaaaatttgatatgtaataatataaagttattgatagttgattagttggtcccatttaagaaatttgtgtgagatg 53096651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 306
Target Start/End: Complemental strand, 54018573 - 54018494
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgaga 306  Q
    |||||||| |||||||||| |||||||||||||||||||  ||||| |||||  ||| ||||||  |||||||| |||||    
T  54018573 aatattaaaaaattgaaatataataatataaaattattgacagtttattagtgggtttcatttaaaaaatttgtctgaga 54018494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 30865891 - 30865968
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtga 304  Q
    |||||||| ||||||||||||||| ||||||| |||||| |||||  ||||| |||  |||||| ||||||| |||||    
T  30865891 aatattaaaaaattgaaatgtaatgatataaagttattgatagttgattagtgagtctcatttaagaaatttatgtga 30865968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 39055162 - 39055242
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| ||||| ||||||||| ||||||| |||||| |||||  |||||  ||| |||||| ||| ||||||||||||    
T  39055162 aatattaaaaaattaaaatgtaatgatataaagttattgatagttgattagtgggtttcatttaagaactttgtgtgagat 39055242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 307
Target Start/End: Complemental strand, 2574170 - 2574093
Alignment:
Q  230 attaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    ||||| ||||||||||||||| ||||||| |||||  |||||  ||||| | ||| ||||| ||||||||| ||||||    
T  2574170 attaaaaaattgaaatgtaatgatataaagttattaatagttgattagtgaattctatttaagaaatttgtatgagat 2574093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 35332107 - 35332027
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| |||||||||| |||| ||||||| |||||| |||||  |||||   | ||||||| ||| ||||||||||||    
T  35332107 aatattaaaaaattgaaatataatgatataaagttattgatagttgattagtggatcccatttaagaactttgtgtgagat 35332027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 52199803 - 52199883
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| |||||||||| |||| ||||| |||||||| ||||   |||||  || ||||||| ||| ||||||||||||    
T  52199803 aatattaaaaaattgaaatataatgatatataattattgatagtggattagtgggtcccatttaagaactttgtgtgagat 52199883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 13420832 - 13420752
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| |||||||||| |||| ||||||| |||||| |||||  ||||| ||| |||||||  || ||||||||||||    
T  13420832 aatattaaaaaattgaaatataattatataaagttattgatagttgattagtgagtcccatttaacaactttgtgtgagat 13420752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 837869 - 837791
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| | ||||||||||||| |||||||||||| | |||||  |||||  ||| |||||| ||||||| ||||||||    
T  837869 aatattaaaatattgaaatgtaatgatataaaattatagatagtt--ttagtttgtttcatttaagaaatttatgtgagat 837791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 3558772 - 3558849
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtga 304  Q
    |||||||| ||||||| || ||||||| |||| |||||| |||||  ||| |  || |||||||||||||||||||||    
T  3558772 aatattaaaaaattgatatctaataatttaaagttattgatagttgattaatgggtcccatttatgaaatttgtgtga 3558849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Complemental strand, 35463352 - 35463271
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    |||||||| |||||||||  |||| |||||||||||||| |||||  ||  | | || |||||| |||||||||||||||||    
T  35463352 aatattaaaaaattgaaacataatgatataaaattattgatagttgatttatgaatttcatttaagaaatttgtgtgagatg 35463271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 2375548 - 2375628
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| ||||| |||| |||| ||||||| |||||| |||||  |||||  || ||||||| ||| ||||||||||||    
T  2375548 aatattaaaaaattaaaatataattatataaagttattgatagttgattagtgggtcccatttaagaactttgtgtgagat 2375628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 7293046 - 7293126
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| ||||||||||||||| ||||||  |||||| |||||  ||||| ||| | |||||  || ||||||||||||    
T  7293046 aatattaaaaaattgaaatgtaatgatataatgttattgatagttaattagtgagtcctatttaaaaactttgtgtgagat 7293126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Original strand, 11200736 - 11200780
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||| | |||||||||||||||||||||| |||||    
T  11200736 aatattaaaaaattaatatgtaataatataaaattattgatagtt 11200780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 42951856 - 42951776
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagat 307  Q
    |||||||| ||||||||||||| | |||||||||||||| || ||  |||||  ||  |||||| ||| ||||||||||||    
T  42951856 aatattaaaaaattgaaatgtagtgatataaaattattgataattgattagtgggtctcatttaagaactttgtgtgagat 42951776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 313
Target Start/End: Complemental strand, 33832064 - 33831978
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatgatgat 313  Q
    |||||||| ||||| || |||||| |||| ||||||||| |||||  |||||   ||||||| | ||||||||||||||||| ||||    
T  33832064 aatattaaaaaattaaattgtaatgatatgaaattattgatagttgattagtggattccattaaagaaatttgtgtgagatgctgat 33831978  T

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Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 227 - 308
Target Start/End: Original strand, 46048883 - 46048964
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtttgttagtaagttccatttatgaaatttgtgtgagatg 308  Q
    |||||||| ||||||  |||||||  |||||| |||||| |||||  || || ||||||||||| ||| |||||||||||||    
T  46048883 aatattaaaaaattgttatgtaatggtataaagttattgatagttgatttgtgagttccatttaagaactttgtgtgagatg 46048964  T

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Target: scaffold0712 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 6184 - 6140
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||||| || ||||||||||||||||||| |||||    
T  6184 aatattaaaaaattgatatataataatataaaattattgatagtt 6140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0709 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 227 - 271
Target Start/End: Complemental strand, 6202 - 6158
Alignment:
Q  227 aatattaataaattgaaatgtaataatataaaattattggtagtt 271  Q
    |||||||| ||||||| || ||||||||||||||||||| |||||    
T  6202 aatattaaaaaattgatatataataatataaaattattgatagtt 6158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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