View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0864_low_40 (Length: 251)
Name: NF0864_low_40
Description: NF0864
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0864_low_40 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 39894576 - 39894355
Alignment:
| Q |
1 |
atataccaaagcatgacgtgataaagttacagagaaattttctcatacttagtgtacacgttaaattatcaaagatttctcatatcacacagaaaacata |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
39894576 |
atataccaaagcatgacgtgataaagttacagagaaattttctcatacttagtgtacacgttaaattatcaaagatttctcatatcacacagaaaacaca |
39894477 |
T |
|
| Q |
101 |
actatttagtatggtgctacctcaggttgagtacacgcaagagttgcaaggactctccaattccaatatgtgactcgcgtaaataacttggtactctcct |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39894476 |
actatttagtatggtgctacctcaggttgagtacacgcaagagttgcaaggactctccaattccaatatgtgactcgcgtaaataacttggtactctcct |
39894377 |
T |
|
| Q |
201 |
gttaaagtgagaaaggcatccc |
222 |
Q |
| |
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|||||||||||||||||||||| |
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|
| T |
39894376 |
gttaaagtgagaaaggcatccc |
39894355 |
T |
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