View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0865_high_19 (Length: 301)

Name: NF0865_high_19
Description: NF0865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0865_high_19
NF0865_high_19
[»] chr1 (10 HSPs)
chr1 (30-171)||(5935390-5935535)
chr1 (243-286)||(21498920-21498963)
chr1 (242-294)||(35104078-35104130)
chr1 (243-294)||(29221502-29221553)
chr1 (243-294)||(31539954-31540005)
chr1 (243-294)||(31548523-31548574)
chr1 (241-294)||(44320206-44320259)
chr1 (243-294)||(3432904-3432955)
chr1 (243-286)||(52100017-52100060)
chr1 (242-280)||(20314055-20314093)
[»] scaffold0044 (2 HSPs)
scaffold0044 (243-286)||(81808-81851)
scaffold0044 (243-286)||(65560-65603)
[»] scaffold0083 (1 HSPs)
scaffold0083 (241-294)||(15811-15864)
[»] chr2 (22 HSPs)
chr2 (245-286)||(26903355-26903396)
chr2 (242-286)||(42249477-42249521)
chr2 (240-294)||(15953086-15953140)
chr2 (240-281)||(20917517-20917558)
chr2 (242-294)||(14582924-14582976)
chr2 (243-294)||(15944571-15944622)
chr2 (243-294)||(20621518-20621569)
chr2 (243-286)||(24285696-24285739)
chr2 (243-286)||(24292372-24292415)
chr2 (243-286)||(34070626-34070669)
chr2 (243-294)||(35138593-35138644)
chr2 (243-294)||(35146929-35146980)
chr2 (243-294)||(41233858-41233909)
chr2 (243-293)||(17687413-17687463)
chr2 (242-294)||(38168371-38168423)
chr2 (242-294)||(44372704-44372756)
chr2 (242-294)||(44388615-44388667)
chr2 (242-277)||(25483600-25483635)
chr2 (242-277)||(25491206-25491241)
chr2 (243-294)||(42565943-42565994)
chr2 (243-294)||(42574567-42574618)
chr2 (243-276)||(20372345-20372378)
[»] chr4 (8 HSPs)
chr4 (242-294)||(10638327-10638379)
chr4 (242-294)||(27343705-27343757)
chr4 (241-294)||(12428492-12428545)
chr4 (243-294)||(12996476-12996527)
chr4 (243-294)||(52295604-52295655)
chr4 (242-292)||(8103104-8103154)
chr4 (243-292)||(8094298-8094347)
chr4 (242-276)||(21532336-21532370)
[»] chr3 (19 HSPs)
chr3 (242-286)||(30498-30542)
chr3 (243-286)||(8197718-8197761)
chr3 (243-282)||(2211239-2211278)
chr3 (243-294)||(16816218-16816268)
chr3 (243-294)||(17628265-17628316)
chr3 (243-294)||(17919199-17919250)
chr3 (243-294)||(17933655-17933706)
chr3 (247-294)||(18349560-18349607)
chr3 (243-294)||(50824352-50824403)
chr3 (243-294)||(50851457-50851508)
chr3 (242-294)||(18039010-18039062)
chr3 (243-294)||(8154658-8154709)
chr3 (243-294)||(9525448-9525499)
chr3 (243-294)||(41006556-41006607)
chr3 (243-294)||(41015336-41015387)
chr3 (243-277)||(14538636-14538670)
chr3 (243-277)||(27341366-27341400)
chr3 (243-276)||(28470249-28470282)
chr3 (242-294)||(21186746-21186798)
[»] scaffold0991 (1 HSPs)
scaffold0991 (243-286)||(395-438)
[»] chr8 (11 HSPs)
chr8 (243-286)||(4582204-4582247)
chr8 (241-294)||(25579826-25579879)
chr8 (241-294)||(30938280-30938333)
chr8 (242-294)||(17973564-17973616)
chr8 (242-294)||(26876068-26876120)
chr8 (243-294)||(26873618-26873669)
chr8 (242-294)||(1407087-1407139)
chr8 (243-294)||(39837576-39837627)
chr8 (243-294)||(39845619-39845670)
chr8 (242-276)||(17683828-17683862)
chr8 (243-276)||(17664672-17664705)
[»] scaffold0497 (1 HSPs)
scaffold0497 (241-294)||(10991-11044)
[»] scaffold0431 (1 HSPs)
scaffold0431 (241-294)||(137-190)
[»] scaffold0170 (1 HSPs)
scaffold0170 (243-292)||(7206-7255)
[»] scaffold0015 (1 HSPs)
scaffold0015 (243-283)||(192528-192568)
[»] scaffold0002 (1 HSPs)
scaffold0002 (242-294)||(121227-121279)
[»] chr7 (8 HSPs)
chr7 (242-294)||(12978454-12978506)
chr7 (243-294)||(4941591-4941642)
chr7 (243-294)||(13831500-13831551)
chr7 (243-294)||(18304406-18304457)
chr7 (242-294)||(30244774-30244826)
chr7 (242-294)||(30245567-30245619)
chr7 (242-294)||(30255412-30255463)
chr7 (243-294)||(10439937-10439988)
[»] chr6 (13 HSPs)
chr6 (242-294)||(23925334-23925386)
chr6 (243-294)||(5004061-5004112)
chr6 (243-294)||(5489133-5489184)
chr6 (243-294)||(5994699-5994750)
chr6 (243-294)||(13490193-13490244)
chr6 (243-293)||(25550295-25550345)
chr6 (242-292)||(30824545-30824595)
chr6 (243-293)||(35091691-35091741)
chr6 (242-294)||(11279836-11279888)
chr6 (242-294)||(25506555-25506607)
chr6 (243-282)||(11053702-11053741)
chr6 (243-294)||(13825703-13825754)
chr6 (245-294)||(25991852-25991901)
[»] chr5 (16 HSPs)
chr5 (242-294)||(31421788-31421840)
chr5 (243-294)||(23350090-23350141)
chr5 (243-294)||(24956860-24956911)
chr5 (243-294)||(24965323-24965374)
chr5 (242-294)||(29186292-29186344)
chr5 (246-286)||(41099798-41099838)
chr5 (243-294)||(1728173-1728224)
chr5 (242-277)||(19223554-19223589)
chr5 (243-282)||(20372939-20372978)
chr5 (243-282)||(20398661-20398700)
chr5 (243-294)||(28843940-28843991)
chr5 (243-294)||(28852550-28852601)
chr5 (243-294)||(43598060-43598111)
chr5 (243-294)||(43603552-43603603)
chr5 (243-294)||(43609044-43609095)
chr5 (242-294)||(31410889-31410941)
[»] scaffold0863 (1 HSPs)
scaffold0863 (243-286)||(394-437)
[»] scaffold0389 (1 HSPs)
scaffold0389 (243-286)||(416-459)
[»] scaffold0156 (1 HSPs)
scaffold0156 (243-294)||(35370-35421)
[»] scaffold0016 (1 HSPs)
scaffold0016 (243-294)||(23464-23515)
[»] scaffold0209 (1 HSPs)
scaffold0209 (241-294)||(98-151)
[»] scaffold0111 (1 HSPs)
scaffold0111 (242-291)||(33034-33083)
[»] scaffold0027 (1 HSPs)
scaffold0027 (243-276)||(65710-65743)
[»] scaffold0039 (1 HSPs)
scaffold0039 (242-294)||(40847-40899)
[»] scaffold0048 (1 HSPs)
scaffold0048 (243-282)||(7655-7694)


Alignment Details
Target: chr1 (Bit Score: 109; Significance: 7e-55; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 30 - 171
Target Start/End: Original strand, 5935390 - 5935535
Alignment:
Q  30 aaactttgattcaacacttaaagaattggagtaggatgagatccctatcgggctagatgttaatggcggcttagttaaatccaatgaaaaggaaacttta 129  Q
    |||||||||||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  5935390 aaactttgattcaacacttacagaattcgagtcggatgagatccctatcgggctagatgttaatggcggcttagttaaatccaatgaaaaggaaactttc 5935489  T
Q  130 tggaatgaaaacataa----atacatgataatctaaagcatagtta 171  Q
    ||||||||||||||||    ||||||| ||||||||||||||||||    
T  5935490 tggaatgaaaacataaatacatacatggtaatctaaagcatagtta 5935535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 21498963 - 21498920
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  21498963 tgtcataccccaaattttgaccacttttctctatttttacacat 21498920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 35104130 - 35104078
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  35104130 ttgtcataccccaaattttgaccacttttctctattcttacccattttattcg 35104078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 29221553 - 29221502
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||| |||||||||||||||||| ||| |||||||    
T  29221553 tgtcataccccaaattttgactacttttctctatttttacccattttattcg 29221502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 31539954 - 31540005
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  31539954 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 31540005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 31548523 - 31548574
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  31548523 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 31548574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 44320259 - 44320206
Alignment:
Q  241 gttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||||| ||||||||||||||||||||  ||||||| ||| |||||||    
T  44320259 gttgtcataccccaaattttgaccacttttctcgctttttacccattttattcg 44320206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 3432955 - 3432904
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  3432955 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 3432904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 52100017 - 52100060
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    ||||||| ||||||||||||||| |||||||| |||||||||||    
T  52100017 tgtcatatcctaaattttgaccatttttctctgtttttacacat 52100060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 280
Target Start/End: Complemental strand, 20314093 - 20314055
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctattttt 280  Q
    ||||||||||| ||||||||||||||||| |||||||||    
T  20314093 ttgtcataccccaaattttgaccacttttttctattttt 20314055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 81851 - 81808
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  81851 tgtcataccctaaattttgaccacttttctctatttttacacat 81808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 65603 - 65560
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    |||||||||| ||||||||  |||||||||||||||||||||||    
T  65603 tgtcataccccaaattttgtacacttttctctatttttacacat 65560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 15811 - 15864
Alignment:
Q  241 gttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  15811 gttgtcataccccaaattttgaccacttttctctatttttacccattttattcg 15864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 245 - 286
Target Start/End: Complemental strand, 26903396 - 26903355
Alignment:
Q  245 tcataccctaaattttgaccacttttctctatttttacacat 286  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26903396 tcataccctaaattttgaccacttttctctatttttacacat 26903355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 42249521 - 42249477
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  42249521 ttgtcataccccaaattttgaccacttttctctatttttacacat 42249477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 294
Target Start/End: Complemental strand, 15953140 - 15953086
Alignment:
Q  240 ggttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  15953140 ggttgtcataccccaaattttgaccacttttctctattcttacccattttattcg 15953086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 20917517 - 20917558
Alignment:
Q  240 ggttgtcataccctaaattttgaccacttttctctattttta 281  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  20917517 ggttgtcatactctaaattttgaccacttttctctattttta 20917558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 14582924 - 14582976
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  14582924 ttgtcataccccaaattttgaccacttttctctattcttacccattttattcg 14582976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 15944622 - 15944571
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  15944622 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 15944571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 20621518 - 20621569
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  20621518 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 20621569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 24285696 - 24285739
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  24285696 tgtcataccccaaattttgaccacttttctttatttttacacat 24285739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 24292372 - 24292415
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  24292372 tgtcataccccaaattttgaccacttttctttatttttacacat 24292415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 34070669 - 34070626
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    |||||||||| ||||||||| |||||||||||||||||||||||    
T  34070669 tgtcataccccaaattttgatcacttttctctatttttacacat 34070626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 35138593 - 35138644
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  35138593 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 35138644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 35146929 - 35146980
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  35146929 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 35146980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 41233909 - 41233858
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  41233909 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 41233858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 17687463 - 17687413
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattc 293  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| ||||||    
T  17687463 tgtcataccccaaattttgaccacttttctctattcttacccattttattc 17687413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 38168423 - 38168371
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||| | |||||||||||||||||||||||| |||| ||| |||||||    
T  38168423 ttgtcatactccaaattttgaccacttttctctattcttacccattttattcg 38168371  T

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Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 44372704 - 44372756
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| ||||||||||||||||| ||||| ||||| ||| |||||||    
T  44372704 ttgtcataccccaaattttgaccacttttttctatctttacccattttattcg 44372756  T

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Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 44388615 - 44388667
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| ||||||||||||||||| ||||| ||||| ||| |||||||    
T  44388615 ttgtcataccccaaattttgaccacttttttctatctttacccattttattcg 44388667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 277
Target Start/End: Original strand, 25483600 - 25483635
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatt 277  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25483600 ttgtcataccccaaattttgaccacttttctctatt 25483635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 277
Target Start/End: Original strand, 25491206 - 25491241
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatt 277  Q
    ||||||||||| ||||||||||||||||||||||||    
T  25491206 ttgtcataccccaaattttgaccacttttctctatt 25491241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 42565994 - 42565943
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  42565994 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 42565943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 42574618 - 42574567
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  42574618 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 42574567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 276
Target Start/End: Complemental strand, 20372378 - 20372345
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctat 276  Q
    |||||||||| |||||||||||||||||||||||    
T  20372378 tgtcataccccaaattttgaccacttttctctat 20372345  T

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Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 10638327 - 10638379
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  10638327 ttgtcataccccaaattttgaccacttttctctatttttacccattttattcg 10638379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 27343757 - 27343705
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  27343757 ttgtcataccccaaattttgaccacttttctctatttttacccattttattcg 27343705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 12428545 - 12428492
Alignment:
Q  241 gttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||    
T  12428545 gttgtcataccccaaattttgaccacttttctctatttctacccattttattcg 12428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 12996476 - 12996527
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  12996476 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 12996527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 52295604 - 52295655
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  52295604 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 52295655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 292
Target Start/End: Complemental strand, 8103154 - 8103104
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattatt 292  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| |||||    
T  8103154 ttgtcataccccaaattttgaccacttttctctattcttacccattttatt 8103104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 8094347 - 8094298
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattatt 292  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||    
T  8094347 tgtcataccccaaattttgaccacttttctctattcttacccattttatt 8094298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 276
Target Start/End: Complemental strand, 21532370 - 21532336
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctat 276  Q
    ||||||||||| |||||||||||||||||||||||    
T  21532370 ttgtcataccccaaattttgaccacttttctctat 21532336  T

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Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 286
Target Start/End: Complemental strand, 30542 - 30498
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  30542 ttgtcataccccaaattttgaccacttttctctatttttacacat 30498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 8197761 - 8197718
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  8197761 tgtcataccccaaattttgaccacttttctctatttttacacat 8197718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 2211239 - 2211278
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttac 282  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  2211239 tgtcataccctaaattttgaccacttttctctattcttac 2211278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 16816268 - 16816218
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| ||||||||||||||||||||||||||||| ||| |||||||    
T  16816268 tgtcataccc-aaattttgaccacttttctctatttttactcattttattcg 16816218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 17628265 - 17628316
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  17628265 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 17628316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 17919199 - 17919250
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| ||||||||||||||||||||||||||||  ||| |||||||    
T  17919199 tgtcataccccaaattttgaccacttttctctatttttatccattttattcg 17919250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 17933655 - 17933706
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||| |||||||||||||||| ||| |||||||    
T  17933655 tgtcataccccaaattttgaccaattttctctatttttacccattttattcg 17933706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 294
Target Start/End: Original strand, 18349560 - 18349607
Alignment:
Q  247 ataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||| |||||||||| |||||||||||||||||||||| |||||||    
T  18349560 ataccccaaattttgacaacttttctctatttttacacattttattcg 18349607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 50824352 - 50824403
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  50824352 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 50824403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 50851508 - 50851457
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  50851508 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 50851457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 18039010 - 18039062
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| ||||||||||||||||||||  ||||||| ||| |||||||    
T  18039010 ttgtcataccccaaattttgaccacttttctcgctttttacccattttattcg 18039062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 8154709 - 8154658
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  8154709 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 8154658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 9525499 - 9525448
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| ||||||||| |||||||||||||| |||| ||| |||||||    
T  9525499 tgtcataccccaaattttgatcacttttctctattcttacccattttattcg 9525448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 41006556 - 41006607
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||| ||||||||||| |||| ||| |||||||    
T  41006556 tgtcataccccaaattttgaccatttttctctattcttacccattttattcg 41006607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 41015336 - 41015387
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||| ||||||||||| |||| ||| |||||||    
T  41015336 tgtcataccccaaattttgaccatttttctctattcttacccattttattcg 41015387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Complemental strand, 14538670 - 14538636
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatt 277  Q
    |||||||||| ||||||||||||||||||||||||    
T  14538670 tgtcataccccaaattttgaccacttttctctatt 14538636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 243 - 277
Target Start/End: Complemental strand, 27341400 - 27341366
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatt 277  Q
    |||||||||| ||||||||||||||||||||||||    
T  27341400 tgtcataccccaaattttgaccacttttctctatt 27341366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 276
Target Start/End: Complemental strand, 28470282 - 28470249
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctat 276  Q
    |||||||||| |||||||||||||||||||||||    
T  28470282 tgtcataccccaaattttgaccacttttctctat 28470249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 21186746 - 21186798
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| ||||||||||||||||| ||| ||||||  ||| |||||||    
T  21186746 ttgtcataccccaaattttgaccacttttatctgtttttatccattttattcg 21186798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 438 - 395
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  438 tgtcataccccaaattttgaccacttttctctatttttacacat 395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 11)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 4582204 - 4582247
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  4582204 tgtcataccttaaattttgaccacttttctctatttttacacat 4582247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 25579879 - 25579826
Alignment:
Q  241 gttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||||||||||||||||||||||| |||||| |||| ||| |||||||    
T  25579879 gttgtcataccctaaattttgaccacttttatctattcttacccattttattcg 25579826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 30938280 - 30938333
Alignment:
Q  241 gttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  30938280 gttgtcataccccaaattttgaccacttttctctattcttacccattttattcg 30938333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 17973564 - 17973616
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  17973564 ttgtcataccccaaattttgaccacttttctctattcttacccattttattcg 17973616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 26876120 - 26876068
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  26876120 ttgtcataccccaaattttgaccacttttctctattcttacccattttattcg 26876068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 26873669 - 26873618
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  26873669 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 26873618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 1407139 - 1407087
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  1407139 ttgtcataccccaaattttgaccactttcctctattcttacccattttattcg 1407087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 39837627 - 39837576
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  39837627 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 39837576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 39845670 - 39845619
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  39845670 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 39845619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 276
Target Start/End: Complemental strand, 17683862 - 17683828
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctat 276  Q
    ||||||||||| |||||||||||||||||||||||    
T  17683862 ttgtcataccccaaattttgaccacttttctctat 17683828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 243 - 276
Target Start/End: Complemental strand, 17664705 - 17664672
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctat 276  Q
    |||||||||| |||||||||||||||||||||||    
T  17664705 tgtcataccccaaattttgaccacttttctctat 17664672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 10991 - 11044
Alignment:
Q  241 gttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  10991 gttgtcataccccaaattttgaccacttttctctattcttacccattttattcg 11044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Original strand, 137 - 190
Alignment:
Q  241 gttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||||| ||||||||||||||||||||||||| ||| ||| |||||||    
T  137 gttgtcataccccaaattttgaccacttttctctatttctacccattttattcg 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 292
Target Start/End: Complemental strand, 7255 - 7206
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattatt 292  Q
    |||||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  7255 tgtcataccctaaattttgaccacttttctctgtttttacccattttatt 7206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 243 - 283
Target Start/End: Original strand, 192528 - 192568
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttaca 283  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  192528 tgtcataccccaaattttgaccacttttctctatttttaca 192568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 121227 - 121279
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  121227 ttgtcataccccaaattttgaccacttttctctattcttacccattttattcg 121279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 12978454 - 12978506
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  12978454 ttgtcataccccaaattttgaccacttttctctattcttacccattttattcg 12978506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 4941642 - 4941591
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  4941642 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 4941591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 13831500 - 13831551
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||| |||||||    
T  13831500 tgtcataccctaaattttgaccactttcctctattcttacccattttattcg 13831551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 18304457 - 18304406
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  18304457 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 18304406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 30244774 - 30244826
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||  ||||||||||||||||||||||||||||  ||| |||||||    
T  30244774 ttgtcatacctcaaattttgaccacttttctctatttttatccattttattcg 30244826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 30245567 - 30245619
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| || |||||||||||||||||||||||||  ||| |||||||    
T  30245567 ttgtcatacccaaatttttgaccacttttctctatttttatccattttattcg 30245619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 30255412 - 30255463
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| ||||||||||||||||||||||||||||  ||| |||||||    
T  30255412 ttgtcataccc-aaattttgaccacttttctctatttttatccattttattcg 30255463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 10439937 - 10439988
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| || | ||| |||||||    
T  10439937 tgtcataccccaaattttgaccacttttctctattcttgcccattttattcg 10439988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 23925334 - 23925386
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  23925334 ttgtcataccccaaattttgaccacttttctctattcttacccattttattcg 23925386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 5004061 - 5004112
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  5004061 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 5004112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 5489184 - 5489133
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  5489184 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 5489133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 5994699 - 5994750
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  5994699 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 5994750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 13490193 - 13490244
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| ||||||||||||||||||||||||||||  ||| |||||||    
T  13490193 tgtcataccccaaattttgaccacttttctctatttttatccattttattcg 13490244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Original strand, 25550295 - 25550345
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattc 293  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| ||||||    
T  25550295 tgtcataccccaaattttgaccacttttctctattcttacccattttattc 25550345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 292
Target Start/End: Complemental strand, 30824595 - 30824545
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattatt 292  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| |||||    
T  30824595 ttgtcataccccaaattttgaccacttttctctattcttacccattttatt 30824545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 35091741 - 35091691
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattc 293  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| ||||||    
T  35091741 tgtcataccccaaattttgaccacttttctctattcttacccattttattc 35091691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 11279836 - 11279888
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  11279836 ttgtcataccccaaattttgaccactttcctctattcttacccattttattcg 11279888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 25506607 - 25506555
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| ||||||||| |||||||||||||| |||| ||| |||||||    
T  25506607 ttgtcataccccaaattttgatcacttttctctattcttacccattttattcg 25506555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Original strand, 11053702 - 11053741
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttac 282  Q
    |||||||||| ||||||||||||||||| |||||||||||    
T  11053702 tgtcataccccaaattttgaccacttttttctatttttac 11053741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 13825703 - 13825754
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| ||||||||| |||||||||||||| |||| ||| |||||||    
T  13825703 tgtcataccccaaattttgatcacttttctctattcttacccattttattcg 13825754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Original strand, 25991852 - 25991901
Alignment:
Q  245 tcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||| |||| ||||||||||||||||||| |||| ||| |||||||    
T  25991852 tcataccccaaatgttgaccacttttctctattcttacccattttattcg 25991901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000007; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 31421788 - 31421840
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  31421788 ttgtcatacccaaaattttgaccacttttctctattcttacccattttattcg 31421840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 23350141 - 23350090
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||| |||||||||||||||| ||| |||||||    
T  23350141 tgtcataccccaaattttgaccatttttctctatttttacccattttattcg 23350090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 24956911 - 24956860
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  24956911 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 24956860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 24965374 - 24965323
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  24965374 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 24965323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 29186344 - 29186292
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||||||||||  |||| ||| |||||||    
T  29186344 ttgtcataccccaaattttgaccacttttctctatccttacccattttattcg 29186292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 286
Target Start/End: Complemental strand, 41099838 - 41099798
Alignment:
Q  246 cataccctaaattttgaccacttttctctatttttacacat 286  Q
    ||||||| ||||||||||||||||| |||||||||||||||    
T  41099838 cataccccaaattttgaccacttttatctatttttacacat 41099798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 1728224 - 1728173
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  1728224 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 1728173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 242 - 277
Target Start/End: Original strand, 19223554 - 19223589
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatt 277  Q
    ||||||||||| ||||||||||||||||||||||||    
T  19223554 ttgtcataccccaaattttgaccacttttctctatt 19223589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 20372978 - 20372939
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttac 282  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  20372978 tgtcataccccaaattttgaccacttttctctattcttac 20372939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 20398700 - 20398661
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttac 282  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  20398700 tgtcataccccaaattttgaccacttttctctattcttac 20398661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 28843940 - 28843991
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  28843940 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 28843991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 28852550 - 28852601
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  28852550 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 28852601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 43598111 - 43598060
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  43598111 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 43598060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 43603603 - 43603552
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  43603603 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 43603552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 43609095 - 43609044
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  43609095 tgtcataccccaaattttgaccactttcctctattcttacccattttattcg 43609044  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 294
Target Start/End: Original strand, 31410889 - 31410941
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| ||||||||||||| |||||||||| | || ||| |||||||    
T  31410889 ttgtcataccccaaattttgaccacatttctctattctaacccattttattcg 31410941  T

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Target: scaffold0863 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Complemental strand, 437 - 394
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  437 tgtcataccccaaattttgaccacttttctttatttttacacat 394  T

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Target: scaffold0389 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 286
Target Start/End: Original strand, 416 - 459
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacat 286  Q
    |||||||||||||||||||||||||||||| || ||||||||||    
T  416 tgtcataccctaaattttgaccacttttctttaattttacacat 459  T

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Target: scaffold0156 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Complemental strand, 35421 - 35370
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  35421 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 35370  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 23464 - 23515
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||| |||||||||||||||||||||||| |||| ||| |||||||    
T  23464 tgtcataccccaaattttgaccacttttctctattcttacccattttattcg 23515  T

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Target: scaffold0209 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 151 - 98
Alignment:
Q  241 gttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    |||||||||||| |||||||||||||||| ||||||| |||| ||| |||||||    
T  151 gttgtcataccccaaattttgaccactttcctctattcttacccattttattcg 98  T

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Target: scaffold0111 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 291
Target Start/End: Original strand, 33034 - 33083
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattat 291  Q
    ||||||||||| |||||||||||||||||||||||| |||| ||| ||||    
T  33034 ttgtcataccccaaattttgaccacttttctctattcttacccattttat 33083  T

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Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 243 - 276
Target Start/End: Complemental strand, 65743 - 65710
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctat 276  Q
    ||||||||||||||||||||||||||||||||||    
T  65743 tgtcataccctaaattttgaccacttttctctat 65710  T

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Target: scaffold0039 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 40899 - 40847
Alignment:
Q  242 ttgtcataccctaaattttgaccacttttctctatttttacacatattattcg 294  Q
    ||||||||||| |||||||||||||||||||||||| |||  ||| |||||||    
T  40899 ttgtcataccccaaattttgaccacttttctctattcttatccattttattcg 40847  T

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Target: scaffold0048 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 243 - 282
Target Start/End: Complemental strand, 7694 - 7655
Alignment:
Q  243 tgtcataccctaaattttgaccacttttctctatttttac 282  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  7694 tgtcataccccaaattttgaccacttttctctattcttac 7655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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