View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0865_low_25 (Length: 306)

Name: NF0865_low_25
Description: NF0865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0865_low_25
NF0865_low_25
[»] chr7 (25 HSPs)
chr7 (30-184)||(6347117-6347271)
chr7 (30-184)||(6330639-6330793)
chr7 (184-268)||(44804520-44804604)
chr7 (184-268)||(29467751-29467835)
chr7 (184-271)||(7857009-7857095)
chr7 (189-271)||(34872174-34872256)
chr7 (200-271)||(35156995-35157066)
chr7 (189-271)||(29684113-29684195)
chr7 (183-268)||(3791478-3791563)
chr7 (183-271)||(21600970-21601058)
chr7 (200-271)||(11840447-11840518)
chr7 (182-254)||(39276611-39276683)
chr7 (184-271)||(39651148-39651235)
chr7 (181-254)||(9143470-9143546)
chr7 (206-268)||(24684636-24684698)
chr7 (183-254)||(688062-688133)
chr7 (186-271)||(17169026-17169111)
chr7 (183-271)||(48529933-48530021)
chr7 (184-254)||(21670809-21670879)
chr7 (182-254)||(49146139-49146212)
chr7 (182-271)||(27737741-27737830)
chr7 (183-254)||(4848347-4848418)
chr7 (206-253)||(31900003-31900050)
chr7 (32-69)||(6242345-6242384)
chr7 (215-255)||(42684816-42684856)
[»] chr8 (20 HSPs)
chr8 (183-271)||(24053913-24054001)
chr8 (182-271)||(36776402-36776491)
chr8 (186-271)||(40616094-40616179)
chr8 (193-268)||(40587695-40587770)
chr8 (190-271)||(9472158-9472238)
chr8 (200-271)||(25346050-25346121)
chr8 (205-271)||(41972977-41973043)
chr8 (206-268)||(8760723-8760785)
chr8 (206-268)||(25836268-25836330)
chr8 (186-258)||(45434992-45435064)
chr8 (200-271)||(42245732-42245803)
chr8 (206-268)||(1942811-1942873)
chr8 (207-271)||(44389005-44389069)
chr8 (206-265)||(8162781-8162840)
chr8 (184-271)||(18378802-18378889)
chr8 (200-271)||(41534248-41534319)
chr8 (206-268)||(32844171-32844233)
chr8 (183-230)||(41152667-41152714)
chr8 (183-255)||(19243234-19243306)
chr8 (183-255)||(19316418-19316490)
[»] chr4 (32 HSPs)
chr4 (183-270)||(51347487-51347574)
chr4 (183-271)||(50119957-50120045)
chr4 (189-271)||(24547336-24547418)
chr4 (186-271)||(13171627-13171712)
chr4 (183-271)||(3757725-3757813)
chr4 (180-271)||(36743201-36743292)
chr4 (183-271)||(20588561-20588649)
chr4 (183-268)||(24948289-24948374)
chr4 (183-271)||(17730432-17730520)
chr4 (200-268)||(29712386-29712454)
chr4 (200-271)||(30529278-30529349)
chr4 (183-268)||(43021891-43021976)
chr4 (183-268)||(39406234-39406319)
chr4 (183-268)||(53991554-53991639)
chr4 (183-271)||(3821198-3821286)
chr4 (183-271)||(39716717-39716805)
chr4 (206-268)||(8956938-8957000)
chr4 (206-268)||(8986910-8986972)
chr4 (206-268)||(37349808-37349870)
chr4 (190-271)||(16895991-16896072)
chr4 (183-264)||(35716305-35716386)
chr4 (206-254)||(5752473-5752521)
chr4 (206-265)||(9888895-9888954)
chr4 (184-271)||(35498532-35498619)
chr4 (200-268)||(578607-578675)
chr4 (183-271)||(12682755-12682843)
chr4 (200-271)||(52799041-52799112)
chr4 (184-238)||(47560251-47560305)
chr4 (206-268)||(50033703-50033764)
chr4 (206-255)||(35833429-35833478)
chr4 (200-271)||(15704127-15704198)
chr4 (206-254)||(46104201-46104249)
[»] chr6 (12 HSPs)
chr6 (182-271)||(9737752-9737841)
chr6 (186-268)||(4897497-4897579)
chr6 (183-271)||(33328277-33328365)
chr6 (183-254)||(6969312-6969383)
chr6 (183-254)||(15045563-15045634)
chr6 (183-271)||(1218517-1218605)
chr6 (183-271)||(24443926-24444014)
chr6 (184-271)||(25529241-25529328)
chr6 (183-271)||(18323834-18323922)
chr6 (183-271)||(35133173-35133260)
chr6 (204-254)||(9981276-9981326)
chr6 (183-254)||(4107953-4108024)
[»] chr5 (15 HSPs)
chr5 (182-271)||(36886968-36887057)
chr5 (183-271)||(17643385-17643473)
chr5 (198-271)||(30754423-30754496)
chr5 (184-271)||(3088031-3088118)
chr5 (181-268)||(12592471-12592558)
chr5 (184-271)||(25698717-25698804)
chr5 (206-268)||(6305452-6305514)
chr5 (206-268)||(43138549-43138611)
chr5 (182-271)||(41689273-41689362)
chr5 (206-265)||(754450-754509)
chr5 (207-270)||(12422345-12422408)
chr5 (220-270)||(42977833-42977883)
chr5 (183-271)||(30140501-30140589)
chr5 (184-271)||(33709813-33709900)
chr5 (184-243)||(26602196-26602255)
[»] chr1 (24 HSPs)
chr1 (186-271)||(46626324-46626409)
chr1 (183-271)||(19322344-19322432)
chr1 (183-268)||(38894754-38894839)
chr1 (184-268)||(33075659-33075743)
chr1 (183-268)||(22198910-22198995)
chr1 (181-268)||(1826790-1826877)
chr1 (183-268)||(29844884-29844969)
chr1 (186-271)||(19400733-19400818)
chr1 (183-271)||(16300388-16300476)
chr1 (180-271)||(1367287-1367378)
chr1 (184-268)||(42678374-42678458)
chr1 (186-271)||(51971272-51971356)
chr1 (183-271)||(4890097-4890185)
chr1 (200-268)||(10766202-10766270)
chr1 (183-271)||(17364603-17364691)
chr1 (183-271)||(29188300-29188388)
chr1 (183-271)||(33359699-33359787)
chr1 (183-271)||(47134703-47134791)
chr1 (207-271)||(50557850-50557913)
chr1 (183-271)||(52306068-52306156)
chr1 (206-265)||(28570747-28570806)
chr1 (183-254)||(10698135-10698206)
chr1 (186-255)||(43116050-43116119)
chr1 (206-254)||(5426238-5426286)
[»] chr3 (19 HSPs)
chr3 (183-271)||(29530561-29530649)
chr3 (183-271)||(8528103-8528191)
chr3 (189-268)||(35855209-35855288)
chr3 (186-271)||(26102150-26102235)
chr3 (200-271)||(19368941-19369012)
chr3 (186-271)||(28981817-28981902)
chr3 (186-268)||(11955528-11955610)
chr3 (186-271)||(40831926-40832011)
chr3 (183-264)||(22473643-22473724)
chr3 (183-271)||(11602164-11602252)
chr3 (206-254)||(18682511-18682559)
chr3 (183-254)||(8393562-8393633)
chr3 (206-271)||(22519211-22519276)
chr3 (200-271)||(55297343-55297414)
chr3 (205-271)||(19895645-19895711)
chr3 (184-254)||(33872205-33872275)
chr3 (182-254)||(26777867-26777939)
chr3 (183-254)||(4139364-4139435)
chr3 (183-229)||(48523103-48523149)
[»] chr2 (14 HSPs)
chr2 (183-271)||(10876571-10876657)
chr2 (195-271)||(19486200-19486276)
chr2 (186-268)||(17836969-17837051)
chr2 (193-271)||(42781020-42781098)
chr2 (183-268)||(32677186-32677271)
chr2 (186-268)||(9920912-9920994)
chr2 (184-271)||(4292782-4292869)
chr2 (180-271)||(10050189-10050280)
chr2 (185-271)||(9545775-9545861)
chr2 (205-271)||(19486111-19486177)
chr2 (186-271)||(2952759-2952844)
chr2 (183-254)||(28607220-28607291)
chr2 (200-268)||(18096507-18096575)
chr2 (183-271)||(24520865-24520953)
[»] scaffold0009 (2 HSPs)
scaffold0009 (186-270)||(108549-108633)
scaffold0009 (183-254)||(225434-225505)
[»] scaffold0385 (1 HSPs)
scaffold0385 (200-268)||(8303-8371)
[»] scaffold0057 (1 HSPs)
scaffold0057 (183-271)||(20579-20667)
[»] scaffold0759 (1 HSPs)
scaffold0759 (183-254)||(5908-5979)
[»] scaffold0381 (1 HSPs)
scaffold0381 (206-265)||(9591-9650)
[»] scaffold1112 (1 HSPs)
scaffold1112 (32-69)||(124-161)
[»] scaffold0069 (1 HSPs)
scaffold0069 (183-254)||(11772-11843)
[»] scaffold0051 (1 HSPs)
scaffold0051 (183-254)||(62061-62132)
[»] scaffold2079 (1 HSPs)
scaffold2079 (32-69)||(529-567)


Alignment Details
Target: chr7 (Bit Score: 151; Significance: 7e-80; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 6347117 - 6347271
Alignment:
Q  30 atagtgacccataaaacgtttaatacgaattcgttttatatgtctaaggctggctatactttatatgtacacagagaaagggaaggtttaggacttttat 129  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6347117 atagtgacccataaaacgtttaatacgaattcgttttatacgtctaaggctggctatactttatatgtacacagagaaagggaaggtttaggacttttat 6347216  T
Q  130 atttaaatgcttagaaacttcgaacattgaagctatgagatgagacttggaacat 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6347217 atttaaatgcttagaaacttcgaacattgaagctatgagatgagacttggaacat 6347271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 6330639 - 6330793
Alignment:
Q  30 atagtgacccataaaacgtttaatacgaattcgttttatatgtctaaggctggctatactttatatgtacacagagaaagggaaggtttaggacttttat 129  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6330639 atagtgacccataaaacgtttaatacgaattcgttttatacgtctaaggctggctatactttatttgtacacagagaaagggaaggtttaggacttttat 6330738  T
Q  130 atttaaatgcttagaaacttcgaacattgaagctatgagatgagacttggaacat 184  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6330739 atttaaatgcttagaaacttcgaacactgaagctatgagatgagacttggaacat 6330793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 44804520 - 44804604
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  44804520 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctatttattggtt 44804604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 29467751 - 29467835
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  29467751 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 29467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 7857095 - 7857009
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||| ||| |||||| ||||||||||||||||||||    
T  7857095 tctatatactaataagaaaagaaatgtcccttgaatttaccgttttgtttctataa-gggtaatttgataatctatttattggttgag 7857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 34872174 - 34872256
Alignment:
Q  189 atactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||| ||||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  34872174 atactagtaagaaaagaaatgtcctttgaacttaccattttgtccctataaggggcaatttggtaatctacttattggttgag 34872256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 35157066 - 35156995
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  35157066 aaaagaaatgtcacttgaatttaccattttgcccctataaggggcaatttggtaatctacttatcggttgag 35156995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 189 - 271
Target Start/End: Complemental strand, 29684195 - 29684113
Alignment:
Q  189 atactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||  ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||| | ||||||||||    
T  29684195 atactaatataaaaagaaatgtgccttgaatttaccattttacccctataaggggcaatttggtaatctactaattggttgag 29684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 3791478 - 3791563
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||| |||  |||||||||||||  || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  3791478 atctatatacttatattaaaagaaatgtcctatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 3791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 21601058 - 21600970
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||  ||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||    
T  21601058 atctatatacttctattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 21600970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 11840518 - 11840447
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||    
T  11840518 aaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 11840447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 182 - 254
Target Start/End: Original strand, 39276611 - 39276683
Alignment:
Q  182 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  39276611 catctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaa 39276683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 39651235 - 39651148
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || | ||||||||||    
T  39651235 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattactaattggttgag 39651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 181 - 254
Target Start/End: Original strand, 9143470 - 9143546
Alignment:
Q  181 acatctatatactaataagaaaagaaatg---tcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||||  |||||||||    |||||||||||||||||||||| ||||||||||||||||||||||    
T  9143470 acatctatatactaatataaaaagaaataatatcccttgaatttaccattttgcccctataaggggcaatttggtaa 9143546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 24684698 - 24684636
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  24684698 aatgtcccatgaatttaccattttgcctctataaggggcaatttggtaatctacttattggtt 24684636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 688062 - 688133
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||  |||   ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  688062 atctatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaa 688133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 17169026 - 17169111
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||    
T  17169026 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 17169111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 48530021 - 48529933
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||||||| ||||| |||||||||||| |||||  |||||||||||||||  || ||||||| ||||    
T  48530021 atctatatacttatattaaaagaaatgtcctttgaaattaccattttgcccctattgggggcaatttggtaaattaattattggctgag 48529933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 184 - 254
Target Start/End: Complemental strand, 21670879 - 21670809
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||| |||  |||||||||||||||||||||||| ||||||| ||||||| ||  ||||||||||    
T  21670879 tctatatacttatattaaaagaaatgtcccttgaatttactattttgcccctataaaggataatttggtaa 21670809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 49146212 - 49146139
Alignment:
Q  182 catctatatactaataagaaaaga-aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    ||||||||||||||||  |||||  ||||||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  49146212 catctatatactaatataaaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaa 49146139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 27737830 - 27737741
Alignment:
Q  182 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||  ||  |||||||| ||||||||||||||||||||| | ||||||| ||  ||||||||||  || | ||||||||||    
T  27737830 catctatatacttctataaaaagaaaagtcccttgaatttaccattttacccctataaaggataatttggtaaattactaattggttgag 27737741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 4848347 - 4848418
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||||| ||||| ||||| ||||||||||    
T  4848347 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggtaatttggtaa 4848418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 31900050 - 31900003
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggta 253  Q
    ||||||| |||||||||| ||||||| ||||| |||||||||||||||    
T  31900050 aatgtcctttgaatttacaattttgcccctattaggggcaatttggta 31900003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 6242384 - 6242345
Alignment:
Q  32 agtgacccat--aaaacgtttaatacgaattcgttttata 69  Q
    ||||||||||  ||||||||||||||||||||||||||||    
T  6242384 agtgacccattaaaaacgtttaatacgaattcgttttata 6242345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 255
Target Start/End: Original strand, 42684816 - 42684856
Alignment:
Q  215 tgaatttaccattttgctcctataaggggcaatttggtaat 255  Q
    ||||||||||||||||| ||||||||||||| ||| |||||    
T  42684816 tgaatttaccattttgcccctataaggggcattttagtaat 42684856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 24053913 - 24054001
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24053913 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctacttattggttgag 24054001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 36776402 - 36776491
Alignment:
Q  182 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  36776402 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 36776491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 40616179 - 40616094
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  40616179 tatatactaataagaaaatccatgtcccttgaatttaccattttgctcctataagaggcaatttggtaatctactaattggttgag 40616094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 193 - 268
Target Start/End: Complemental strand, 40587770 - 40587695
Alignment:
Q  193 taataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  40587770 taataagaaaataaatgtccattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 40587695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 9472158 - 9472238
Alignment:
Q  190 tactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||||||||||||||| ||||||||||||    
T  9472158 tactaataagaaaagaaatgtcccttgaaattaccattttgcctctataa-gggcaatttggtaatctacttattggttgag 9472238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 25346050 - 25346121
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  25346050 aaaagaaatgtccattgaatttaccattttgcctctataaggggcaatttggtaatctacttattggttgag 25346121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 205 - 271
Target Start/End: Original strand, 41972977 - 41973043
Alignment:
Q  205 aaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||    
T  41972977 aaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctactaattggttgag 41973043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 8760723 - 8760785
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8760723 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8760785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 25836330 - 25836268
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  25836330 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 25836268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 258
Target Start/End: Original strand, 45434992 - 45435064
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatcta 258  Q
    ||||||||||||||||||   ||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  45434992 tatatactaataagaaaatccatgtcacttgaatttaccattttgcccttataaggggcaatttggtaatcta 45435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 42245803 - 42245732
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||| |||||||| |||||||||| ||||||||||| |||||| ||||||| ||||||||||||    
T  42245803 aaaagaaatgtcacttgaattcaccattttgcccctataaggggtaatttgataatctacttattggttgag 42245732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 1942811 - 1942873
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  1942811 aatgtcccatgaatttaccattttgcctctataaggggcaatttggtaatctacttattggtt 1942873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 271
Target Start/End: Complemental strand, 44389069 - 44389005
Alignment:
Q  207 atgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||||| | | ||||||||| |||||||||||||||| ||||||||||    
T  44389069 atgtcccttgaatttaccatttttcccttataaggggtaatttggtaatctattaattggttgag 44389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 8162840 - 8162781
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattg 265  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  8162840 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 8162781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 18378889 - 18378802
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||| |||  ||||||||||||| ||||||||| ||||||||  |||| ||||||||||||||||  || ||||||||||||    
T  18378889 tctatatacttatattaaaagaaatgtcctttgaatttatcattttgcctctattaggggcaatttggtaaattaattattggttgag 18378802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 41534319 - 41534248
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||||||| |||  |||| ||||||||||    
T  41534319 aaaataaatgtcccatgaatttaccattttgctcctataagggacaatttgataaattattaattggttgag 41534248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 32844171 - 32844233
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| | ||||||||||||||| || ||||||||||||||||||||||| |||||||||    
T  32844171 aatgtcccataaatttaccattttgccccgataaggggcaatttggtaatctacttattggtt 32844233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 41152667 - 41152714
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttg 230  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||    
T  41152667 atctatatacttatataaaaagaaatgtcccttgaatttaccattttg 41152714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 19243234 - 19243306
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaat 255  Q
    |||||||||||||||  |||||  |||||  |||| |||||| |||||| ||| | |||||||||||||||||    
T  19243234 atctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaat 19243306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 183 - 255
Target Start/End: Original strand, 19316418 - 19316490
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaat 255  Q
    |||||||||||||||  |||||  |||||  |||| |||||| |||||| ||| | |||||||||||||||||    
T  19316418 atctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaat 19316490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 6e-40; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 183 - 270
Target Start/End: Original strand, 51347487 - 51347574
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttga 270  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51347487 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctatttattggttga 51347574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 50120045 - 50119957
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  50120045 atctatatactaataagaaaaggaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 50119957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 189 - 271
Target Start/End: Original strand, 24547336 - 24547418
Alignment:
Q  189 atactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  24547336 atactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctatttattggttgag 24547418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 13171627 - 13171712
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  13171627 tatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 13171712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 3757725 - 3757813
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  3757725 atctatatactaataagaaaagaaatgttcattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 3757813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 36743292 - 36743201
Alignment:
Q  180 aacatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||| ||||||||||||    
T  36743292 aacatctatatactaataagaaaagaaatgtcccttaaatttaccattttgtctctataaggggcaatttggtaatctacttattggttgag 36743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 20588561 - 20588649
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| | ||||||||||||    
T  20588561 atctatatactaataagaaaagaaatgtcccttgaattcaccattttgcctctataaggggcaatttggtaatccacttattggttgag 20588649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 24948374 - 24948289
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  24948374 atctatatacttatataaaaagaaatgtcctttgaatttaccattttgctcctataaggggcaatttggaaatctacttattggtt 24948289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 17730432 - 17730520
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||| ||||| | ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  17730432 atctatatgctaatcaaaaaagaaatgtgctttgaatttaccattttgctcctataaggggcaatttggtaatctactaattggttgag 17730520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 29712386 - 29712454
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29712386 aaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 29712454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 30529349 - 30529278
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  30529349 aaaagaaatatcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 30529278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 43021891 - 43021976
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||  |||| ||| |||||||||||||||| |||||||||    
T  43021891 atctatatactaataagaaaagaaatgttccttgaatttaccatcttgcctctattaggtgcaatttggtaatctacttattggtt 43021976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 39406319 - 39406234
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||| |||  ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||    
T  39406319 atctatatacttatataaaaagaaatgttccttgaatttaccatttagcccctataaggggtaatttggtaatctacttattggtt 39406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 53991639 - 53991554
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||| |||  ||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  53991639 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 53991554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 3821286 - 3821198
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||  || | ||||||||||    
T  3821286 atctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttgag 3821198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 39716805 - 39716717
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||||||||    
T  39716805 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttgag 39716717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 8956938 - 8957000
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8956938 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8957000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 8986910 - 8986972
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8986910 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8986972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 37349808 - 37349870
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  37349808 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 37349870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 190 - 271
Target Start/End: Original strand, 16895991 - 16896072
Alignment:
Q  190 tactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||   ||||||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||    
T  16895991 tactaataagaaaatccatgtcccttgaatttacaattttgcccttataaggggctatttggtaatctattaattggttgag 16896072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 264
Target Start/End: Complemental strand, 35716386 - 35716305
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttatt 264  Q
    ||||||||||| |||  ||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| |||||    
T  35716386 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaatctacttatt 35716305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 5752473 - 5752521
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5752473 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 5752521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 9888954 - 9888895
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattg 265  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  9888954 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 9888895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 35498619 - 35498532
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||  |||||||||| |||||||||||| |||||||| ||||||| || |||||||||||  || | ||||||||||    
T  35498619 tctatatactaatataaaaagaaatggcccttgaatttatcattttgcccctataaaggacaatttggtaaattactaattggttgag 35498532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 578675 - 578607
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||||||| | |  |||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  578675 aaaagaaatgtctcattgatttaccattttgcccctataagggacaatttggtaatctacttattggtt 578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 12682843 - 12682755
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||||| ||||| ||||||||||||||||  |||  ||||||||||    
T  12682843 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaattataaattggttgag 12682755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 52799041 - 52799112
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||| || ||||||||||||| | ||||| ||||||||||||||||  || ||||||| ||||    
T  52799041 aaaagaaatgtcctttaaatttaccattttacccctattaggggcaatttggtaaattaattattggctgag 52799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 238
Target Start/End: Complemental strand, 47560305 - 47560251
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctata 238  Q
    |||||||||| |||  ||||| |||||||||||||||||||||||||| ||||||    
T  47560305 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctata 47560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 206 - 268
Target Start/End: Original strand, 50033703 - 50033764
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||  ||||||||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  50033703 aatgtcctatgaatttaccattttgcccttataaggg-caatttggtaatctacttattggtt 50033764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 206 - 255
Target Start/End: Complemental strand, 35833478 - 35833429
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaat 255  Q
    ||||||| |||| ||||||||||||| ||||| |||||||||||||||||    
T  35833478 aatgtccattgattttaccattttgcccctatgaggggcaatttggtaat 35833429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 200 - 271
Target Start/End: Original strand, 15704127 - 15704198
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||| ||||| | || ||||||||||||||| ||||||||||| ||||||||||  || | ||||||||||    
T  15704127 aaaagtaatgttctttaaatttaccattttgcccctataaggggaaatttggtaaattactaattggttgag 15704198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 46104201 - 46104249
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    ||||||| |||| ||||||||||||| || || ||||||||||||||||    
T  46104201 aatgtccattgattttaccattttgccccaatgaggggcaatttggtaa 46104249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 9737841 - 9737752
Alignment:
Q  182 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  9737841 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttgataatctatttattggttgag 9737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 4897579 - 4897497
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4897579 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 4897497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 33328365 - 33328277
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||| ||||||||||   |||||| || |||||||||||||||||||| |||||||||||||||| |||| | ||||||||||    
T  33328365 atctatatacaaataagaaaatccatgtcctttaaatttaccattttgctcctacaaggggcaatttggtagtctactaattggttgag 33328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 6969383 - 6969312
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||  |||   |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6969383 atctatatactaatataaaagttaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 6969312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 15045634 - 15045563
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  15045634 atctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaa 15045563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 1218517 - 1218605
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||    
T  1218517 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 1218605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 24443926 - 24444014
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  24443926 atctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 24444014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 271
Target Start/End: Original strand, 25529241 - 25529328
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||  ||||   |||||| |||  ||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  25529241 tctatatactaatataaaaatccatgtccgttgcttttacgattttgctcctataaggggcaatttggtaatctactaattggttgag 25529328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 18323834 - 18323922
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| |   ||||||||||||  || ||||||| ||||    
T  18323834 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaaaagcaatttggtaaattaattattggctgag 18323922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 35133173 - 35133260
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||| ||||||||||   |||||| || |||||||||||||||  |||||| |||||||||| ||||||| | ||||||||||    
T  35133173 atctatatacaaataagaaaatccatgtcctttaaatttaccattttgcctctataa-gggcaatttgataatctactaattggttgag 35133260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 254
Target Start/End: Complemental strand, 9981326 - 9981276
Alignment:
Q  204 gaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    ||||||| | |||||||||||||||| | ||||||||||||||||||||||    
T  9981326 gaaatgttcattgaatttaccattttacccctataaggggcaatttggtaa 9981276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 4107953 - 4108024
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||| | ||||| ||||||||||||||||    
T  4107953 atctatatactaatataaaagttaatgtccattgattttaccatttttcccctatgaggggcaatttggtaa 4108024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 182 - 271
Target Start/End: Complemental strand, 36887057 - 36886968
Alignment:
Q  182 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||    
T  36887057 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattgattgag 36886968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 17643473 - 17643385
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  17643473 atctatatactaataagaaaataaatgtcccttgaatttatcattttgcccttataaggggcaatttggtaatctatttattggttgag 17643385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 198 - 271
Target Start/End: Original strand, 30754423 - 30754496
Alignment:
Q  198 agaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  30754423 agaaaagaaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 30754496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 3088118 - 3088031
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||| |||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||    
T  3088118 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 3088031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 12592558 - 12592471
Alignment:
Q  181 acatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||||| |||  |||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||| |||||||||    
T  12592558 acatctatatacttatataaaaagaaatgtcccatgaatttaccagtttacccctataaggggcaatttggtaatctacttattggtt 12592471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 25698804 - 25698717
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||||||||    
T  25698804 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttgag 25698717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 6305514 - 6305452
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  6305514 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 6305452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 268
Target Start/End: Complemental strand, 43138611 - 43138549
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  43138611 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 43138549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 182 - 271
Target Start/End: Original strand, 41689273 - 41689362
Alignment:
Q  182 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||    
T  41689273 catctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattatgggcaatttggtaaattaattattggctgag 41689362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 754509 - 754450
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattg 265  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  754509 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 754450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 207 - 270
Target Start/End: Complemental strand, 12422408 - 12422345
Alignment:
Q  207 atgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttga 270  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  12422408 atgtcctttgattttaccattttgcccctataaggggcaatttggtaatctactaattggttga 12422345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 270
Target Start/End: Complemental strand, 42977883 - 42977833
Alignment:
Q  220 ttaccattttgctcctataaggggcaatttggtaatctatttattggttga 270  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  42977883 ttaccattttgcccctataaggggcaatttggtaatctacttattggttga 42977833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 30140501 - 30140589
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||| ||||||||||  || | ||||||||||    
T  30140501 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggtaatttggtaaattactaattggttgag 30140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 33709900 - 33709813
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||| |||  ||||  |||||||||||||||||||||||| | ||||||| ||||||||||||||  || | ||||||||||    
T  33709900 tctatatacttatattaaaattaatgtcccttgaatttaccattttacccctataaagggcaatttggtaaattagtaattggttgag 33709813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 184 - 243
Target Start/End: Complemental strand, 26602255 - 26602196
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataagggg 243  Q
    |||||||||| |||  |||||||||||||||||||||||||||||| | | |||||||||    
T  26602255 tctatatacttatataaaaagaaatgtcccttgaatttaccattttacccttataagggg 26602196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 46626409 - 46626324
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  46626409 tatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 46626324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 19322432 - 19322344
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  19322432 atctatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtattctacttattggttgag 19322344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 38894754 - 38894839
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  38894754 atctatatactaataagaaagtaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 38894839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 33075743 - 33075659
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  33075743 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 33075659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 22198995 - 22198910
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||| |||  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||    
T  22198995 atctatatacttatattaaaagaaatgtcccttgaatttatcattttgcccctataaggggcaatttggtaatctacttattggtt 22198910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 181 - 268
Target Start/End: Original strand, 1826790 - 1826877
Alignment:
Q  181 acatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||||| |||  ||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  1826790 acatctatatacttatattaaaagtaatgtcccttgaatttaccattttggctctataaggggcaatttggtaatctatttattggtt 1826877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 29844969 - 29844884
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||| |||  |||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  29844969 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 29844884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 19400733 - 19400818
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| | ||||||||| |||| ||||||||||| ||||||||||    
T  19400733 tatatactaataagaaaatccatgtcccttgaatttaccattttgcccatataaggggtaattcggtaatctattaattggttgag 19400818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 16300388 - 16300476
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||  |||||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||||    
T  16300388 atctatatacttatattaaaattaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaaattactaattggttgag 16300476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 271
Target Start/End: Original strand, 1367287 - 1367378
Alignment:
Q  180 aacatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  1367287 aacatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 1367378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 42678374 - 42678458
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||||| |||  |||||||||||||| |||||||||||||||   |||||||||||||||||| ||||||| |||||||||    
T  42678374 tctatatacttatataaaaagaaatgtcccatgaatttaccattttatccctataaggggcaatttgataatctacttattggtt 42678458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 51971356 - 51971272
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||   |||||||||||| |||||||||||  ||||||| ||| |||||||||||||||| ||||||||||    
T  51971356 tatatactaataagaaaattcatgtcccttgaagttaccattttgtccctataa-gggtaatttggtaatctattaattggttgag 51971272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 4890097 - 4890185
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||||||| ||||||||||||||||||  |||| ||||||||||||||||  || ||||||| ||||    
T  4890097 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcctctattaggggcaatttggtaaattaattattggctgag 4890185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 10766202 - 10766270
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||||||||  || |||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  10766202 aaaagaaatgtcctatggatttaccattttgcccctataagggtcaatttggtaatctacttattggtt 10766270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 17364691 - 17364603
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  17364691 atctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 17364603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 29188388 - 29188300
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||    
T  29188388 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 29188300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 33359699 - 33359787
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||    
T  33359699 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 33359787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 47134703 - 47134791
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||| | ||||||| |||||||||||||||||| ||||||||||||||||||||||  || | ||||||||||    
T  47134703 atctatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttgag 47134791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 207 - 271
Target Start/End: Original strand, 50557850 - 50557913
Alignment:
Q  207 atgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  50557850 atgtcccatgaatttaccattttg-tcctataaggggcaatttggtaatctactaattggttgag 50557913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 52306068 - 52306156
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||| |||||| ||||||||||||||| |||||||||||||||||| |||  || | ||||||||||    
T  52306068 atctatatacttatataaaaagaaatatccctttaatttaccattttgcccctataaggggcaatttgataaattactaattggttgag 52306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 28570747 - 28570806
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattg 265  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  28570747 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 28570806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 10698206 - 10698135
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||| |||| |  |||||||||||||  | ||||||||||||||| |||| |||||||| ||||||||    
T  10698206 atctatatgctaacataaaaagaaatgtccaataaatttaccattttgcccctagaaggggcattttggtaa 10698135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 255
Target Start/End: Original strand, 43116050 - 43116119
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaat 255  Q
    ||||||||||||  |||| | |||||| |||||||| | ||||||| ||||  |||||||||||||||||    
T  43116050 tatatactaatataaaaatacatgtccattgaatttccaattttgcccctaggaggggcaatttggtaat 43116119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 5426238 - 5426286
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    ||||||| |||| ||||||||||||| | || |||||||||||||||||    
T  5426238 aatgtccattgattttaccattttgcccttagaaggggcaatttggtaa 5426286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 9e-36; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 29530649 - 29530561
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  29530649 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctacttattggttgag 29530561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 8528191 - 8528103
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||||||||||||    
T  8528191 atctatatactaataagaaaagaaatgtcccttgaatttaccattctgtccctataaggggcaatttggtaatatatttattggttgag 8528103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 35855209 - 35855288
Alignment:
Q  189 atactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35855209 atactaataagaaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 35855288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 26102235 - 26102150
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| || |||||||||||||  ||||||||||||    
T  26102235 tatatactaataagaaaagaaatgtcctttgaatttaccattttgcccctataagaggtaatttggtaatctgcttattggttgag 26102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 19369012 - 19368941
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  19369012 aaaagaaatgtcccttgattttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 19368941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 28981902 - 28981817
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||    
T  28981902 tatatactaataagaaaatccatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatcaactaattggttgag 28981817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 11955610 - 11955528
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| |||  |||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  11955610 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 11955528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 40832011 - 40831926
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||| ||||||||||||   |||||||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||||||    
T  40832011 tatatcctaataagaaaatccatgtcccttgaatttaccattttgctcctataagggacaattcggtaatctactaattggttgag 40831926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 183 - 264
Target Start/End: Original strand, 22473643 - 22473724
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttatt 264  Q
    ||||||||||| |||  ||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| |||||    
T  22473643 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaatctacttatt 22473724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 11602252 - 11602164
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||  ||||   |||||| |||| ||||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  11602252 atctatatactaatataaaaatccatgtccgttgattttaccattttgcccctataaggggcaattcagtaatctattaattggttgag 11602164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 254
Target Start/End: Original strand, 18682511 - 18682559
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18682511 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 18682559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 8393562 - 8393633
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||  |||   ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  8393562 atctatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaa 8393633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 22519211 - 22519276
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| ||||  |||| ||||||||||    
T  22519211 aatgtccattgaatttaccattttgcccctataaggggcaatttagtaaattattaattggttgag 22519276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 271
Target Start/End: Complemental strand, 55297414 - 55297343
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||| |||||||||||||| | ||||||| ||| ||||||||||  |||| ||||||||||    
T  55297414 aaaagaaatgtccctcgaatttaccattttacccctataaagggtaatttggtaaattattaattggttgag 55297343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 19895711 - 19895645
Alignment:
Q  205 aaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||| |||||||||||||||||| | ||||| ||||||||||||||  || | ||||||||||    
T  19895711 aaatgtccattgaatttaccattttgcccttataaagggcaatttggtaaattagtaattggttgag 19895645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 254
Target Start/End: Original strand, 33872205 - 33872275
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    ||||||||||||||  |||||||||||||  ||||||||||||||||  |||| ||||| || ||||||||    
T  33872205 tctatatactaatataaaaagaaatgtccgatgaatttaccattttgtccctagaagggccattttggtaa 33872275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 26777939 - 26777867
Alignment:
Q  182 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    ||||||||||||||||  |||   || |||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  26777939 catctatatactaatataaaagttaacgtccattgattttaccattttgcccctatgaggggcaatttggtaa 26777867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 4139435 - 4139364
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||||  ||||| ||||||||||||||||    
T  4139435 atctatatactaatataaaagttaatgtccattgattttaccattttgtccctattaggggcaatttggtaa 4139364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 229
Target Start/End: Complemental strand, 48523149 - 48523103
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccatttt 229  Q
    |||||||||||||||  ||||||||||| ||| ||||||||||||||    
T  48523149 atctatatactaatataaaaagaaatgttcctagaatttaccatttt 48523103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 10876657 - 10876571
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| ||||||||||||    
T  10876657 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccc--taaggggcaatttggtaatctacttattggttgag 10876571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 19486200 - 19486276
Alignment:
Q  195 ataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  19486200 ataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 19486276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 17836969 - 17837051
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  17836969 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 17837051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 193 - 271
Target Start/End: Original strand, 42781020 - 42781098
Alignment:
Q  193 taataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||||||    
T  42781020 taataagaaaagaaatgtcccttgaatttatcattttgtccctgtaaggggcaatttggtaatctatttattggttgag 42781098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 32677271 - 32677186
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  32677271 atctatatacttatattaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 32677186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 186 - 268
Target Start/End: Complemental strand, 9920994 - 9920912
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||| |||  |||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9920994 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 9920912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 184 - 271
Target Start/End: Complemental strand, 4292869 - 4292782
Alignment:
Q  184 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||| |||  ||||||||||||| |||||||||||||||||||||||| | ||||||||||||||  || ||||||| ||||    
T  4292869 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgctcctattaagggcaatttggtaaattaattattggctgag 4292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 271
Target Start/End: Complemental strand, 10050280 - 10050189
Alignment:
Q  180 aacatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| |||||||||||| |||  || | ||||||||||    
T  10050280 aacatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttgataaattactaattggttgag 10050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 185 - 271
Target Start/End: Complemental strand, 9545861 - 9545775
Alignment:
Q  185 ctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  9545861 ctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 9545775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 271
Target Start/End: Complemental strand, 19486177 - 19486111
Alignment:
Q  205 aaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||| ||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  19486177 aaatatccattgaatttatcattttgcccctataaggggcaatttggtaatctacttattggttgag 19486111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 186 - 271
Target Start/End: Original strand, 2952759 - 2952844
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  2952759 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 2952844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 28607220 - 28607291
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    ||||||||||| |||  |||| |||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  28607220 atctatatacttatattaaaataaatgtccattgaatttaccattttgtccctataaggggcaatttggtaa 28607291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 268
Target Start/End: Original strand, 18096507 - 18096575
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||  |||| |||||||    
T  18096507 aaaagaaatgtcctttgaatttaccattttgcccctataaggggtaatttggcaaattattaattggtt 18096575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 24520865 - 24520953
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  |||||||||||||||||||||||  |||||||  |||||||| ||||||||||||  || | ||||||||||    
T  24520865 atctatatacttatataaaaagaaatgtcccttgaatttataattttgcctctataaggagcaatttggtaaattactaattggttgag 24520953  T

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Target: scaffold0009 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 186 - 270
Target Start/End: Original strand, 108549 - 108633
Alignment:
Q  186 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttga 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||||||||||||  ||||||||||    
T  108549 tatatactaataagaaaagaaatgtcccttgaatttaccattttgtccccataaggggtaatttggtaatctacgtattggttga 108633  T

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Target: scaffold0009; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 225434 - 225505
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  225434 atctatatacttatattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 225505  T

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Target: scaffold0385 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 268
Target Start/End: Complemental strand, 8371 - 8303
Alignment:
Q  200 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 268  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8371 aaaagaaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8303  T

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Target: scaffold0057 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 183 - 271
Target Start/End: Complemental strand, 20667 - 20579
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 271  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  20667 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 20579  T

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Target: scaffold0759 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 254
Target Start/End: Complemental strand, 5979 - 5908
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||  |||   |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  5979 atctatatactaatataaaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 5908  T

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Target: scaffold0381 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 265
Target Start/End: Original strand, 9591 - 9650
Alignment:
Q  206 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattg 265  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  9591 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 9650  T

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Target: scaffold1112 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1112
Description:

Target: scaffold1112; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 161 - 124
Alignment:
Q  32 agtgacccataaaacgtttaatacgaattcgttttata 69  Q
    ||||||||||||||||||||||||||||||||||||||    
T  161 agtgacccataaaacgtttaatacgaattcgttttata 124  T

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Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 11772 - 11843
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    ||||||||||| |||  ||||||||||||  ||||||||||||||||||   ||| ||||||||||||||||    
T  11772 atctatatacttatattaaaagaaatgtcatttgaatttaccattttgcctttattaggggcaatttggtaa 11843  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 254
Target Start/End: Original strand, 62061 - 62132
Alignment:
Q  183 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 254  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  62061 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaa 62132  T

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Target: scaffold2079 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2079
Description:

Target: scaffold2079; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 69
Target Start/End: Complemental strand, 567 - 529
Alignment:
Q  32 agtgacccataaaa-cgtttaatacgaattcgttttata 69  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  567 agtgacccataaaaacgtttaatacgaattcgttttata 529  T

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