View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0865_low_74 (Length: 205)
Name: NF0865_low_74
Description: NF0865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0865_low_74 |
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Alignment Details
Target: chr5 (Bit Score: 122; Significance: 9e-63; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 29700927 - 29701056
Alignment:
| Q |
1 |
ttcctgaagtagaaccacctccacaagagctactaaaatctccagaattttacatcttgacttttttggagagtctcatacctcatgtcaaagcaactat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29700927 |
ttcctgaagtagaaccacctccacaagagctactaaaatctccagaattttacatcttgacttttttggagagtctcatacctcatgtcaaagcaactat |
29701026 |
T |
|
| Q |
101 |
caaaaccattttatcaaacaatattgttgg |
130 |
Q |
| |
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||||||||||||||||||||| ||||||| |
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| T |
29701027 |
caaaaccattttatcaaacaaagttgttgg |
29701056 |
T |
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