View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0866_high_17 (Length: 261)
Name: NF0866_high_17
Description: NF0866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0866_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 232
Target Start/End: Original strand, 38089846 - 38090059
Alignment:
| Q |
19 |
atgaattgcacatgagttccatcctggaattaccaaataattttagctagtaatataattttcatttataaaaataataatggaatgaaatacattgata |
118 |
Q |
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| T |
38089846 |
atgaattgcacatgagttccatcctggaattaccaaataattttagctagtaatataattttcatttataaaaataataatggaatgaaatacattgata |
38089945 |
T |
|
| Q |
119 |
gaagaacaaaaaatgatctaaaattattaataaagtcataaagattaattagcataccaaaagatcattgttttttattccatcaaagagagaaggttcc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
38089946 |
aaagaacaaaaaatgatctaaaattattaataaagtcataaagattaattagcataccagaagatcattgttttttattccatcaaagagagaaggttcc |
38090045 |
T |
|
| Q |
219 |
atccatccttcagt |
232 |
Q |
| |
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|||||||||||||| |
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| T |
38090046 |
atccatccttcagt |
38090059 |
T |
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